Csor.00g065920 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g065920
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	pre-mRNA-splicing factor SPF27 homolog
Location	Csor_Chr13: 10368305 .. 10370257 (+)
RNA-Seq Expression	Csor.00g065920
Synteny	Csor.00g065920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATCAACAACAATAGCGGGGATATCCTGATGCTCGAGGCTCCACCGCAGCCATCTCAACCAGCGTGGCGCGTTTCTGCAGATGCGGAGGTAATCGACGCCTTGCCCTACATCGACGATGACTATGCGGACCCAAGGGTCAAAGCAGAGGTCGATCGATTAGTGGAGGAAGAGATGCGGCGCAGCTCCAAGCGACCTGCCGACTTTCTCAAAGACTTGCCTCCTCTTCCCAAGTTCAAATTTGAGGTAGGTTAGGCTGCAATTTCCTTTCCCGCCGGAGCTTCTTCTAGGTTACGCACTTGTAGTTCCGCTTGATTTTATAGGTTATCATGCCTGAAAGAACGAATTACTTTTTCTCACTGGTTTTATTTGATAGACAGTTACTAATGCCGAAACTGGAAGTGTTTAGAAGCTTCATCTGCTAGTTTTCTTCCAAAACATCCTCTATTTGTTTTCTCGAAAACGAGATGAAAAAATTCGGATAAAAATTAATCGTTCGACAAGAACATAGGATATGAGCACACTGCTTATCCTCAAGTCACTGTGCGTCATCCAATGAATATATGACGCGCTACTCTACATAAGTTATTTTGCCACTACATTGGATAGATCTTGAAATTATTACGAAGTGTGATAATATTAGCAATAGTCTATTCAACTGACGTAGTTTGAACTCAGGATCATCCAATGCTTGCGAGAGAGTATGAACGTGTAAGAGCTGGGAGGCCTCCAATGCCTCTCGATGTTGCTAGATATAAATTAGAGACACCGCCTCCAAATAAAAAGAATGACGAAACTGCTTGGAAGCAGACACTTCAGAGAGCTCAATGCCTACTCCAGCATCAAGTGCTGAGGTGAAGTTTAGCATGTTAAAGTTGTTCCTGGCATTTAAGCTTTGTATTTCTGGAAAACTAAATTTTATGGAGAACAGTTAGAGTTGGCTACTTGAACTCATACAGTTCTTCTAATATCTGCCACACATAGTTAACATTTCTATGCCTTTTCTTGGTTGCAGTTGGTTTCTCATATCTAGTTTGTGTACCAATGAGCCATGACTGTGAGAGGTGTAATTTATAAAATTTTGATAAGAAAAGACATAATTCAGAAGATTATACGCCCAAACATGAAATTAAACATTAGAAAGGTTTTGACGATTCATTAGGAGATAATAAGAATATGGTAATCTGATGACTGGTGATGCTGTTGTCTCATACTGCAGGCTGGAAAATTTGGAACTGATGTCAAAATATGGCCCTGATATCTGGAAGCAACACAACAAACAGTTGGAAGCACTTCTATCAAGGTTTGTTACCATATTTCTTTTTGATGTCTTATATTTTGTGTACTAATTTTCTATTTATGTTGATCAAATATGATTCCAAGTCAAATCATTTGGCTTATCTCGTTCTATAGTGTAAATATGATTTCTGAATGAAGTGAACATGAAATTTAAGTACATCTGTGATCTGACTAAAGTAGACTATATGATTGTTAATATATTGTCATGATGTTATCAGAATGCAAAAATTAGCTCAAGAACAGAATGAGAAGATTGAAAAAGTGAACCGTGAAAGGAAATTCCATCAAGTAAGTAGCATCCCTGTAATTCATATTTCAATGGGGCAGAGGTCAATTCTTTGGAATGTTTGGTTGATTATTTATGCGATGATCAGCAAAACGCTGCATATGAGCTTCATGCTTTGTCCACTCAATGGAAGGAGCTGTGCGAGAAAAATATGGAAATCCAAGTGGCATGCTCTCAAATAGAGGGTCAAATCCAGGAACTAAGGAGTGAGGCAGCAGAAAAGTAATCTTGCCTTCTTCTATTTAATCTATTTTTGTCCTACATATGTTTGGCATGTTTAGTACTGATCTGTGGGTTATGATTCCAGAGGCTGGAATTTGGAAGTCAATGTAGAGAATGGTTCTGTTTCGTTCCCAGTGTCATAA

mRNA sequence

ATGGCGATCAACAACAATAGCGGGGATATCCTGATGCTCGAGGCTCCACCGCAGCCATCTCAACCAGCGTGGCGCGTTTCTGCAGATGCGGAGGTAATCGACGCCTTGCCCTACATCGACGATGACTATGCGGACCCAAGGGTCAAAGCAGAGGTCGATCGATTAGTGGAGGAAGAGATGCGGCGCAGCTCCAAGCGACCTGCCGACTTTCTCAAAGACTTGCCTCCTCTTCCCAAGTTCAAATTTGAGGATCATCCAATGCTTGCGAGAGAGTATGAACGTGTAAGAGCTGGGAGGCCTCCAATGCCTCTCGATGTTGCTAGATATAAATTAGAGACACCGCCTCCAAATAAAAAGAATGACGAAACTGCTTGGAAGCAGACACTTCAGAGAGCTCAATGCCTACTCCAGCATCAAGTGCTGAGGCTGGAAAATTTGGAACTGATGTCAAAATATGGCCCTGATATCTGGAAGCAACACAACAAACAGTTGGAAGCACTTCTATCAAGAATGCAAAAATTAGCTCAAGAACAGAATGAGAAGATTGAAAAAGTGAACCGTGAAAGGAAATTCCATCAACAAAACGCTGCATATGAGCTTCATGCTTTGTCCACTCAATGGAAGGAGCTGTGCGAGAAAAATATGGAAATCCAAGTGGCATGCTCTCAAATAGAGGGTCAAATCCAGGAACTAAGGAGTGAGGCAGCAGAAAAAGGCTGGAATTTGGAAGTCAATGTAGAGAATGGTTCTGTTTCGTTCCCAGTGTCATAA

Coding sequence (CDS)

ATGGCGATCAACAACAATAGCGGGGATATCCTGATGCTCGAGGCTCCACCGCAGCCATCTCAACCAGCGTGGCGCGTTTCTGCAGATGCGGAGGTAATCGACGCCTTGCCCTACATCGACGATGACTATGCGGACCCAAGGGTCAAAGCAGAGGTCGATCGATTAGTGGAGGAAGAGATGCGGCGCAGCTCCAAGCGACCTGCCGACTTTCTCAAAGACTTGCCTCCTCTTCCCAAGTTCAAATTTGAGGATCATCCAATGCTTGCGAGAGAGTATGAACGTGTAAGAGCTGGGAGGCCTCCAATGCCTCTCGATGTTGCTAGATATAAATTAGAGACACCGCCTCCAAATAAAAAGAATGACGAAACTGCTTGGAAGCAGACACTTCAGAGAGCTCAATGCCTACTCCAGCATCAAGTGCTGAGGCTGGAAAATTTGGAACTGATGTCAAAATATGGCCCTGATATCTGGAAGCAACACAACAAACAGTTGGAAGCACTTCTATCAAGAATGCAAAAATTAGCTCAAGAACAGAATGAGAAGATTGAAAAAGTGAACCGTGAAAGGAAATTCCATCAACAAAACGCTGCATATGAGCTTCATGCTTTGTCCACTCAATGGAAGGAGCTGTGCGAGAAAAATATGGAAATCCAAGTGGCATGCTCTCAAATAGAGGGTCAAATCCAGGAACTAAGGAGTGAGGCAGCAGAAAAAGGCTGGAATTTGGAAGTCAATGTAGAGAATGGTTCTGTTTCGTTCCCAGTGTCATAA

Protein sequence

MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLQHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGWNLEVNVENGSVSFPVS

Homology

[Close]

BLAST of Csor.00g065920 vs. ExPASy Swiss-Prot
Match: Q949S9 (Pre-mRNA-splicing factor SPF27 homolog OS=Arabidopsis thaliana OX=3702 GN=MOS4 PE=1 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 8.4e-89
Identity = 161/244 (65.98%), Postives = 205/244 (84.02%), Query Frame = 0


Query: 6   NSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSK 65
           N+GD+LMLEA P+ ++P W  +A+AEVIDALPYIDDDY +P +K+EVDRLVEEEMRRSSK
Sbjct: 4   NNGDVLMLEATPEAARP-WASAANAEVIDALPYIDDDYGNPLIKSEVDRLVEEEMRRSSK 63

Query: 66  RPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDV-ARYKLETPPPNKKNDETA 125
           +PADFLKDLPPLPKF F++ P+L +EYERVRAG+PP+ +D  +RYKLE PP NK+ND+ A
Sbjct: 64  KPADFLKDLPPLPKFDFKNCPVLGKEYERVRAGKPPVRIDFESRYKLEMPPANKRNDDAA 123

Query: 126 WKQTLQRAQCLLQHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEK 185
           WKQ LQ+ Q  LQ +++ LENLELMSK GP++W+Q+N +LE  L+RMQ+LAQEQNE+IEK
Sbjct: 124 WKQYLQKNQRSLQQKLIELENLELMSKLGPELWRQNNHRLEVFLTRMQRLAQEQNEEIEK 183

Query: 186 VNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGWNLEV 245
           VNRERK+HQQ  +YEL+ALS +W++LC KNMEIQ AC+ +E QI   + EAAE+GWNLE 
Sbjct: 184 VNRERKYHQQTTSYELNALSQEWRQLCVKNMEIQSACAMLETQIDSFKKEAAERGWNLEE 243

Query: 246 NVEN 249
            +EN
Sbjct: 244 KLEN 246

[Close]

BLAST of Csor.00g065920 vs. ExPASy Swiss-Prot
Match: Q6PBE2 (Pre-mRNA-splicing factor SPF27 OS=Xenopus tropicalis OX=8364 GN=bcas2 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.2e-27
Identity = 74/212 (34.91%), Postives = 117/212 (55.19%), Query Frame = 0


Query: 32  VIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPLPKFKFEDHPMLARE 91
           V+DALPY D  Y    V+     LVEEE RR   RP        P P +   +  ++  E
Sbjct: 12  VVDALPYFDQGYDAQGVREAAAALVEEETRR--YRPTKNYLSYLPTPDYSAFETEIMRNE 71

Query: 92  YERVRAGRPPMPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLQHQVLRLENLELMSK 151
           +ER+ + +P   L + RY+L  P   ++ND TAW++ +  +   L+HQ +R+ENLELMS+
Sbjct: 72  FERLSSRQPLELLSMKRYELPAPLSGQRNDITAWQECVNNSMAQLEHQAVRIENLELMSQ 131

Query: 152 YGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELC 211
           +G + WK +N+ L  ++   QK  Q+  +KI+ +N +RK  Q  A   L  + + W  L 
Sbjct: 132 HGCNAWKVYNENLLHMIDCAQKDLQKLRKKIQDLNWQRKNSQLTAGARLREMESTWVSLV 191

Query: 212 EKNMEIQVACSQIEGQIQELRSEAAEKGWNLE 244
            KN EI+ A  Q+E ++ +L+  + E   N+E
Sbjct: 192 SKNYEIERAIVQMENEVYQLKERSGENKENIE 221

[Close]

BLAST of Csor.00g065920 vs. ExPASy Swiss-Prot
Match: Q5RKQ0 (Pre-mRNA-splicing factor SPF27 OS=Danio rerio OX=7955 GN=bcas2 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 7.0e-27
Identity = 71/206 (34.47%), Postives = 110/206 (53.40%), Query Frame = 0


Query: 33  IDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPLPKFKFEDHPMLAREY 92
           +DALPY D  Y    V+     LVEEE RR   RP        P P F   +  ++  E+
Sbjct: 13  VDALPYFDQGYDATGVREAAAALVEEETRR--YRPTKNYLSYLPTPDFSAFETEIMRNEF 72

Query: 93  ERVRAGRPPMPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLQHQVLRLENLELMSKY 152
           ER+ A +P   L + RY+L  P   +KND TAW+  +  +   L+HQ +R+ENLELM++Y
Sbjct: 73  ERLAARQPMELLSMKRYELPAPSSGQKNDMTAWQDCVNNSMAQLEHQAVRIENLELMAQY 132

Query: 153 GPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELCE 212
           G + WK  N  L  ++   QK  Q   ++I+ +N +RK  Q     +L  L + W  L  
Sbjct: 133 GTNAWKMSNDNLALMIENSQKELQNVRKEIQDLNWQRKNDQLAGGAKLRELESNWVSLVS 192

Query: 213 KNMEIQVACSQIEGQIQELRSEAAEK 239
           KN EI+ A  Q+E ++ +++ +  ++
Sbjct: 193 KNYEIERAIVQLENEVAQMKQQQGDE 216

[Close]

BLAST of Csor.00g065920 vs. ExPASy Swiss-Prot
Match: O75934 (Pre-mRNA-splicing factor SPF27 OS=Homo sapiens OX=9606 GN=BCAS2 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 9.2e-27
Identity = 72/206 (34.95%), Postives = 113/206 (54.85%), Query Frame = 0


Query: 32  VIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPLPKFKFEDHPMLARE 91
           V+DALPY D  Y  P V+     LVEEE RR   RP          P +   +  ++  E
Sbjct: 12  VVDALPYFDQGYEAPGVREAAAALVEEETRR--YRPTKNYLSYLTAPDYSAFETDIMRNE 71

Query: 92  YERVRAGRPPMPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLQHQVLRLENLELMSK 151
           +ER+ A +P   L + RY+L  P   +KND TAW++ +  +   L+HQ +R+ENLELMS+
Sbjct: 72  FERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIENLELMSQ 131

Query: 152 YGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELC 211
           +G + WK +N+ L  ++   QK  Q+  + I+ +N +RK  Q  A  +L  + + W  L 
Sbjct: 132 HGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMESNWVSLV 191

Query: 212 EKNMEIQVACSQIEGQIQELRSEAAE 238
            KN EI+    Q+E +I +++ +  E
Sbjct: 192 SKNYEIERTIVQLENEIYQIKQQHGE 215

[Close]

BLAST of Csor.00g065920 vs. ExPASy Swiss-Prot
Match: Q9D287 (Pre-mRNA-splicing factor SPF27 OS=Mus musculus OX=10090 GN=Bcas2 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 9.2e-27
Identity = 72/206 (34.95%), Postives = 113/206 (54.85%), Query Frame = 0


Query: 32  VIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPLPKFKFEDHPMLARE 91
           V+DALPY D  Y  P V+     LVEEE RR   RP          P +   +  ++  E
Sbjct: 12  VVDALPYFDQGYEAPGVREAAAALVEEETRR--YRPTKNYLSYLTAPDYSAFETDIMRNE 71

Query: 92  YERVRAGRPPMPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLQHQVLRLENLELMSK 151
           +ER+ A +P   L + RY+L  P   +KND TAW++ +  +   L+HQ +R+ENLELMS+
Sbjct: 72  FERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIENLELMSQ 131

Query: 152 YGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELC 211
           +G + WK +N+ L  ++   QK  Q+  + I+ +N +RK  Q  A  +L  + + W  L 
Sbjct: 132 HGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMESNWVSLV 191

Query: 212 EKNMEIQVACSQIEGQIQELRSEAAE 238
            KN EI+    Q+E +I +++ +  E
Sbjct: 192 SKNYEIERTIVQLENEIYQIKQQHGE 215

[Close]

BLAST of Csor.00g065920 vs. NCBI nr
Match: KAG6584331.1 (Pre-mRNA-splicing factor SPF27-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019921.1 Pre-mRNA-splicing factor SPF27-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 500 bits (1287), Expect = 3.11e-178
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQRAQCLLQHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240

Query: 241 NLEVNVENGSVSFPVS 256
           NLEVNVENGSVSFPVS
Sbjct: 241 NLEVNVENGSVSFPVS 256

[Close]

BLAST of Csor.00g065920 vs. NCBI nr
Match: XP_023518986.1 (pre-mRNA-splicing factor SPF27 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 499 bits (1284), Expect = 8.91e-178
Identity = 255/256 (99.61%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQRAQCLLQHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240

Query: 241 NLEVNVENGSVSFPVS 256
           NLEVNVENGSVSFP+S
Sbjct: 241 NLEVNVENGSVSFPMS 256

[Close]

BLAST of Csor.00g065920 vs. NCBI nr
Match: XP_022923949.1 (pre-mRNA-splicing factor SPF27 homolog [Cucurbita moschata] >XP_022923950.1 pre-mRNA-splicing factor SPF27 homolog [Cucurbita moschata])

HSP 1 Score: 498 bits (1281), Expect = 2.55e-177
Identity = 255/256 (99.61%), Postives = 255/256 (99.61%), Query Frame = 0


Query: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQRAQCLLQHQVLRLENLELMSKY PDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYAPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240

Query: 241 NLEVNVENGSVSFPVS 256
           NLEVNVENGSVSFPVS
Sbjct: 241 NLEVNVENGSVSFPVS 256

[Close]

BLAST of Csor.00g065920 vs. NCBI nr
Match: XP_023001174.1 (pre-mRNA-splicing factor SPF27 homolog [Cucurbita maxima] >XP_023001176.1 pre-mRNA-splicing factor SPF27 homolog [Cucurbita maxima] >XP_023001177.1 pre-mRNA-splicing factor SPF27 homolog [Cucurbita maxima])

HSP 1 Score: 494 bits (1272), Expect = 6.02e-176
Identity = 254/256 (99.22%), Postives = 254/256 (99.22%), Query Frame = 0


Query: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MAINNNSGDILMLEAPP PSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAINNNSGDILMLEAPPLPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQRAQCLLQHQVLRLENLELMSKYG DIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYGSDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240

Query: 241 NLEVNVENGSVSFPVS 256
           NLEVNVENGSVSFPVS
Sbjct: 241 NLEVNVENGSVSFPVS 256

[Close]

BLAST of Csor.00g065920 vs. NCBI nr
Match: XP_004137495.1 (pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus] >KGN64160.1 hypothetical protein Csa_014348 [Cucumis sativus])

HSP 1 Score: 484 bits (1246), Expect = 5.53e-172
Identity = 246/256 (96.09%), Postives = 252/256 (98.44%), Query Frame = 0


Query: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA NNN+GDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPP+PLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQ+AQCLL+HQVLRLENL+LMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVAC Q+EGQIQELR EAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240

Query: 241 NLEVNVENGSVSFPVS 256
           NLEVNVENGSVS PVS
Sbjct: 241 NLEVNVENGSVSLPVS 256

[Close]

BLAST of Csor.00g065920 vs. ExPASy TrEMBL
Match: A0A6J1EDE4 (pre-mRNA-splicing factor SPF27 homolog OS=Cucurbita moschata OX=3662 GN=LOC111431514 PE=4 SV=1)

HSP 1 Score: 498 bits (1281), Expect = 1.24e-177
Identity = 255/256 (99.61%), Postives = 255/256 (99.61%), Query Frame = 0


Query: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQRAQCLLQHQVLRLENLELMSKY PDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYAPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240

Query: 241 NLEVNVENGSVSFPVS 256
           NLEVNVENGSVSFPVS
Sbjct: 241 NLEVNVENGSVSFPVS 256

[Close]

BLAST of Csor.00g065920 vs. ExPASy TrEMBL
Match: A0A6J1KLZ4 (pre-mRNA-splicing factor SPF27 homolog OS=Cucurbita maxima OX=3661 GN=LOC111495390 PE=4 SV=1)

HSP 1 Score: 494 bits (1272), Expect = 2.91e-176
Identity = 254/256 (99.22%), Postives = 254/256 (99.22%), Query Frame = 0


Query: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MAINNNSGDILMLEAPP PSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAINNNSGDILMLEAPPLPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQRAQCLLQHQVLRLENLELMSKYG DIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYGSDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240

Query: 241 NLEVNVENGSVSFPVS 256
           NLEVNVENGSVSFPVS
Sbjct: 241 NLEVNVENGSVSFPVS 256

[Close]

BLAST of Csor.00g065920 vs. ExPASy TrEMBL
Match: A0A0A0LQG2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042680 PE=4 SV=1)

HSP 1 Score: 484 bits (1246), Expect = 2.68e-172
Identity = 246/256 (96.09%), Postives = 252/256 (98.44%), Query Frame = 0


Query: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA NNN+GDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPP+PLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQ+AQCLL+HQVLRLENL+LMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVAC Q+EGQIQELR EAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240

Query: 241 NLEVNVENGSVSFPVS 256
           NLEVNVENGSVS PVS
Sbjct: 241 NLEVNVENGSVSLPVS 256

[Close]

BLAST of Csor.00g065920 vs. ExPASy TrEMBL
Match: A0A1S3CHH7 (pre-mRNA-splicing factor SPF27 homolog OS=Cucumis melo OX=3656 GN=LOC103500959 PE=4 SV=1)

HSP 1 Score: 482 bits (1240), Expect = 2.20e-171
Identity = 245/256 (95.70%), Postives = 251/256 (98.05%), Query Frame = 0


Query: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA NNN+GDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPK KFEDHPMLAREYERVRAGRPP+PLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQ+AQCLL+HQVLRLENL+LMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVAC Q+EGQIQELR EAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240

Query: 241 NLEVNVENGSVSFPVS 256
           NLEVNVENGSVS PVS
Sbjct: 241 NLEVNVENGSVSLPVS 256

[Close]

BLAST of Csor.00g065920 vs. ExPASy TrEMBL
Match: A0A6J1CB04 (pre-mRNA-splicing factor SPF27 homolog OS=Momordica charantia OX=3673 GN=LOC111009059 PE=4 SV=1)

HSP 1 Score: 469 bits (1206), Expect = 3.35e-166
Identity = 237/256 (92.58%), Postives = 246/256 (96.09%), Query Frame = 0


Query: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA N+N+GDILMLEAPPQPSQP W V+ADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MATNSNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120
           RRS KRPADFLKDLPP+PK KFEDHP+LAREYERVRAGRPP+PLDVARYKLETPPPNKKN
Sbjct: 61  RRSFKRPADFLKDLPPVPKVKFEDHPLLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQRAQCLL+HQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWK+LC KNMEIQVACSQIEGQIQELR EAAE GW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGW 240

Query: 241 NLEVNVENGSVSFPVS 256
           NLE N+ENGSVS PVS
Sbjct: 241 NLEANIENGSVSLPVS 256

[Close]

BLAST of Csor.00g065920 vs. TAIR 10
Match: AT3G18165.1 (modifier of snc1,4 )

HSP 1 Score: 328.2 bits (840), Expect = 6.0e-90
Identity = 161/244 (65.98%), Postives = 205/244 (84.02%), Query Frame = 0


Query: 6   NSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSK 65
           N+GD+LMLEA P+ ++P W  +A+AEVIDALPYIDDDY +P +K+EVDRLVEEEMRRSSK
Sbjct: 4   NNGDVLMLEATPEAARP-WASAANAEVIDALPYIDDDYGNPLIKSEVDRLVEEEMRRSSK 63

Query: 66  RPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDV-ARYKLETPPPNKKNDETA 125
           +PADFLKDLPPLPKF F++ P+L +EYERVRAG+PP+ +D  +RYKLE PP NK+ND+ A
Sbjct: 64  KPADFLKDLPPLPKFDFKNCPVLGKEYERVRAGKPPVRIDFESRYKLEMPPANKRNDDAA 123

Query: 126 WKQTLQRAQCLLQHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEK 185
           WKQ LQ+ Q  LQ +++ LENLELMSK GP++W+Q+N +LE  L+RMQ+LAQEQNE+IEK
Sbjct: 124 WKQYLQKNQRSLQQKLIELENLELMSKLGPELWRQNNHRLEVFLTRMQRLAQEQNEEIEK 183

Query: 186 VNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGWNLEV 245
           VNRERK+HQQ  +YEL+ALS +W++LC KNMEIQ AC+ +E QI   + EAAE+GWNLE 
Sbjct: 184 VNRERKYHQQTTSYELNALSQEWRQLCVKNMEIQSACAMLETQIDSFKKEAAERGWNLEE 243

Query: 246 NVEN 249
            +EN
Sbjct: 244 KLEN 246

The following BLAST results are available for this feature:

BLAST of Csor.00g065920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q949S9	8.4e-89	65.98	Pre-mRNA-splicing factor SPF27 homolog OS=Arabidopsis thaliana OX=3702 GN=MOS4 P...	[more]
Q6PBE2	3.2e-27	34.91	Pre-mRNA-splicing factor SPF27 OS=Xenopus tropicalis OX=8364 GN=bcas2 PE=2 SV=1	[more]
Q5RKQ0	7.0e-27	34.47	Pre-mRNA-splicing factor SPF27 OS=Danio rerio OX=7955 GN=bcas2 PE=2 SV=1	[more]
O75934	9.2e-27	34.95	Pre-mRNA-splicing factor SPF27 OS=Homo sapiens OX=9606 GN=BCAS2 PE=1 SV=1	[more]
Q9D287	9.2e-27	34.95	Pre-mRNA-splicing factor SPF27 OS=Mus musculus OX=10090 GN=Bcas2 PE=1 SV=1	[more]

BLAST of Csor.00g065920 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6584331.1	3.11e-178	100.00	Pre-mRNA-splicing factor SPF27-like protein, partial [Cucurbita argyrosperma sub...	[more]
XP_023518986.1	8.91e-178	99.61	pre-mRNA-splicing factor SPF27 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022923949.1	2.55e-177	99.61	pre-mRNA-splicing factor SPF27 homolog [Cucurbita moschata] >XP_022923950.1 pre-...	[more]
XP_023001174.1	6.02e-176	99.22	pre-mRNA-splicing factor SPF27 homolog [Cucurbita maxima] >XP_023001176.1 pre-mR...	[more]
XP_004137495.1	5.53e-172	96.09	pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus] >KGN64160.1 hypothetica...	[more]

BLAST of Csor.00g065920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EDE4	1.24e-177	99.61	pre-mRNA-splicing factor SPF27 homolog OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1KLZ4	2.91e-176	99.22	pre-mRNA-splicing factor SPF27 homolog OS=Cucurbita maxima OX=3661 GN=LOC1114953...	[more]
A0A0A0LQG2	2.68e-172	96.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042680 PE=4 SV=1	[more]
A0A1S3CHH7	2.20e-171	95.70	pre-mRNA-splicing factor SPF27 homolog OS=Cucumis melo OX=3656 GN=LOC103500959 P...	[more]
A0A6J1CB04	3.35e-166	92.58	pre-mRNA-splicing factor SPF27 homolog OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Csor.00g065920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18165.1	6.0e-90	65.98	modifier of snc1,4	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 214..234
None	No IPR available	COILS	Coil	Coil	coord: 157..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR13296:SF0	PRE-MRNA-SPLICING FACTOR SPF27	coord: 15..239
IPR008409	Pre-mRNA-splicing factor SPF27	PFAM	PF05700	BCAS2	coord: 31..237 e-value: 9.8E-74 score: 247.5
IPR008409	Pre-mRNA-splicing factor SPF27	PANTHER	PTHR13296	BCAS2 PROTEIN	coord: 15..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g065920.m01	Csor.00g065920.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0002758	innate immune response-activating signal transduction
biological_process	GO:0006397	mRNA processing
biological_process	GO:0008380	RNA splicing
cellular_component	GO:0071013	catalytic step 2 spliceosome
cellular_component	GO:0000974	Prp19 complex