Csor.00g065730 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g065730
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr13: 10273139 .. 10274078 (+)
RNA-Seq ExpressionCsor.00g065730
SyntenyCsor.00g065730
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAGAACAGAGTGGTTAGCTGGAAGAAGAAGAAGAAGAAGACTGAAAAAATCTCCAAATGTTCCGCGCCTTTACCTTCATCTTCTTGTTCTTTCATCTCTGCCGCTACAGTCTCTTCTGCGTTTGATCGTAAATCGTCGTGAGTTTCTGAACTTTCTTCTCTATGGATTGGTCTTGATTTTGGAGCATGATTTAGGTTTTTCTGATTTTGATTGTTGAAAATCGCGTATGTACGGTATTTTCTTTGAGAAACAAAGAGAGTCGAGATGATCAAATAGGCTCCTGGTTTTACGAATTGAGATGTAATTGATCTAATACAAGAGGCATTCAAACACATTTTTGTGTTAAAAACTGATGAGGCTTTCCCTGCCCCTTGCTGCATAGGTTTATTGAGGCATGGATTCAGTCAGTGGTGTAGGTGGAAATTTTTGTGGCAATATTTTGTATGCCGAAGAGAATGAGACGACTGGGAAATGCAGAAACTCTATTTCATTAAAACCTATGGCATGTCAGGTTTTTGGCTTCTTAGGAGGCCAGAAGTAATTTCCATTTTTCTGTGTAAAGTTTGCTTCGTTTCCCATCCTTGAAAGTTTAAATTCTGTCTTTTCAACATCACATCATCCAATTACCCTTGCAGGGAGCTGATGTTGTACATACTTATTTGTAACTATTTTTTCAGAGAGGTTTATACGCTCCTGCAAAAAAAATGTTTCAATCTACCCCTCCAAGCTTAACGTTCTTGCTGGCACTTGTTTTCCTCTCTAATCGACGTGGGATCTCACACATTTCTCATCCAAGCAGTGACATCTTATTTGCTGATAGAAATGCTAGATTTCTGGCAGAAGCGATTGTTAATGGATCCTGTGAACATAAACAGCTTATTTCCATTGGAAGACATGCTAGAGGATCTGGAGTTCAGGACATGGATGCACAATGA

mRNA sequence

ATGAACAGAACAGAGTGGTTAGCTGGAAGAAGAAGAAGAAGAAGACTGAAAAAATCTCCAAATGTTCCGCGCCTTTACCTTCATCTTCTTGTTCTTTCATCTCTGCCGCTACAGTCTCTTCTGCGTTTGATCGTAAATCGTCGTTTATTGAGGCATGGATTCAGTCAGTGGTGTAGTGACATCTTATTTGCTGATAGAAATGCTAGATTTCTGGCAGAAGCGATTGTTAATGGATCCTGTGAACATAAACAGCTTATTTCCATTGGAAGACATGCTAGAGGATCTGGAGTTCAGGACATGGATGCACAATGA

Coding sequence (CDS)

ATGAACAGAACAGAGTGGTTAGCTGGAAGAAGAAGAAGAAGAAGACTGAAAAAATCTCCAAATGTTCCGCGCCTTTACCTTCATCTTCTTGTTCTTTCATCTCTGCCGCTACAGTCTCTTCTGCGTTTGATCGTAAATCGTCGTTTATTGAGGCATGGATTCAGTCAGTGGTGTAGTGACATCTTATTTGCTGATAGAAATGCTAGATTTCTGGCAGAAGCGATTGTTAATGGATCCTGTGAACATAAACAGCTTATTTCCATTGGAAGACATGCTAGAGGATCTGGAGTTCAGGACATGGATGCACAATGA

Protein sequence

MNRTEWLAGRRRRRRLKKSPNVPRLYLHLLVLSSLPLQSLLRLIVNRRLLRHGFSQWCSDILFADRNARFLAEAIVNGSCEHKQLISIGRHARGSGVQDMDAQ
Homology
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BLAST of Csor.00g065730 vs. NCBI nr
Match: KAG6584312.1 (hypothetical protein SDJN03_20244, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 202 bits (515), Expect = 1.53e-65
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MNRTEWLAGRRRRRRLKKSPNVPRLYLHLLVLSSLPLQSLLRLIVNRRLLRHGFSQWCSD 60
           MNRTEWLAGRRRRRRLKKSPNVPRLYLHLLVLSSLPLQSLLRLIVNRRLLRHGFSQWCSD
Sbjct: 1   MNRTEWLAGRRRRRRLKKSPNVPRLYLHLLVLSSLPLQSLLRLIVNRRLLRHGFSQWCSD 60

Query: 61  ILFADRNARFLAEAIVNGSCEHKQLISIGRHARGSGVQDMDAQ 103
           ILFADRNARFLAEAIVNGSCEHKQLISIGRHARGSGVQDMDAQ
Sbjct: 61  ILFADRNARFLAEAIVNGSCEHKQLISIGRHARGSGVQDMDAQ 103

The following BLAST results are available for this feature:
BLAST of Csor.00g065730 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g065730 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6584312.11.53e-65100.00hypothetical protein SDJN03_20244, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g065730 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g065730 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g065730.m01Csor.00g065730.m01mRNA