Csor.00g064960 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g064960
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	D-ribose-binding periplasmic protein
Location	Csor_Chr13: 9839865 .. 9840541 (+)
RNA-Seq Expression	Csor.00g064960
Synteny	Csor.00g064960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAATTGCCAAGCCATTGACACAGCATCTCTAATCATCCAACACCCAAACGGAAAAGTCGACCGATTTTACTGGCCGGTAAACGCCGGCGAGATCATGAAGTCAAATCCCGGGCACTACGTCGCCCTTCTCATCTCCACCAAAATCTGTCCATCAAAATCCACCGCCGGAGACCGCCGCCGTCATCAGGACATCCAAACAAACACCACAAATTTCAACTCGGTCCGATTAACTCGAATCAAGCTTCTCAAGCCGACCGATTCCCTCGTTCTCGGCCAAATTTACCGCCTTGTCACAAACCAAGGTCTGTTTAATGTTTAATTCCTTAATTCTTAGCTTATTTTCACTAATTCATCCGGTTCTGAATTTGGTATTGTGGGTTTAGATGTGTTGCAGGGTTTGAAAGCGAAACAGGAAGCGAAAATGAAGAGAAATTCAATGGATTTTGAAGGGAAAGATGGAAATTTGGAGAAGGGTTCAGAAGGGGAAATGAATCAGGTGGGTTTTTAATTAATTTTAGTGATTAAATTCTATTTCATGAGTGAAATCTGAATGTTTTAGTTCCACTTATTTTGCAGGGGATGAAATGTGAGAAAAACAGAGCAGTGTCGTCGGCGGCGAAATCGAGAGGGTGGCAGCCTTCTCTGCAGAGCATTTCCGAGGCCGGAAGTTGA

mRNA sequence

ATGGGAAATTGCCAAGCCATTGACACAGCATCTCTAATCATCCAACACCCAAACGGAAAAGTCGACCGATTTTACTGGCCGGTAAACGCCGGCGAGATCATGAAGTCAAATCCCGGGCACTACGTCGCCCTTCTCATCTCCACCAAAATCTGTCCATCAAAATCCACCGCCGGAGACCGCCGCCGTCATCAGGACATCCAAACAAACACCACAAATTTCAACTCGGTCCGATTAACTCGAATCAAGCTTCTCAAGCCGACCGATTCCCTCGTTCTCGGCCAAATTTACCGCCTTGTCACAAACCAAGATGTGTTGCAGGGTTTGAAAGCGAAACAGGAAGCGAAAATGAAGAGAAATTCAATGGATTTTGAAGGGAAAGATGGAAATTTGGAGAAGGGTTCAGAAGGGGAAATGAATCAGGGGATGAAATGTGAGAAAAACAGAGCAGTGTCGTCGGCGGCGAAATCGAGAGGGTGGCAGCCTTCTCTGCAGAGCATTTCCGAGGCCGGAAGTTGA

Coding sequence (CDS)

ATGGGAAATTGCCAAGCCATTGACACAGCATCTCTAATCATCCAACACCCAAACGGAAAAGTCGACCGATTTTACTGGCCGGTAAACGCCGGCGAGATCATGAAGTCAAATCCCGGGCACTACGTCGCCCTTCTCATCTCCACCAAAATCTGTCCATCAAAATCCACCGCCGGAGACCGCCGCCGTCATCAGGACATCCAAACAAACACCACAAATTTCAACTCGGTCCGATTAACTCGAATCAAGCTTCTCAAGCCGACCGATTCCCTCGTTCTCGGCCAAATTTACCGCCTTGTCACAAACCAAGATGTGTTGCAGGGTTTGAAAGCGAAACAGGAAGCGAAAATGAAGAGAAATTCAATGGATTTTGAAGGGAAAGATGGAAATTTGGAGAAGGGTTCAGAAGGGGAAATGAATCAGGGGATGAAATGTGAGAAAAACAGAGCAGTGTCGTCGGCGGCGAAATCGAGAGGGTGGCAGCCTTCTCTGCAGAGCATTTCCGAGGCCGGAAGTTGA

Protein sequence

MGNCQAIDTASLIIQHPNGKVDRFYWPVNAGEIMKSNPGHYVALLISTKICPSKSTAGDRRRHQDIQTNTTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTNQDVLQGLKAKQEAKMKRNSMDFEGKDGNLEKGSEGEMNQGMKCEKNRAVSSAAKSRGWQPSLQSISEAGS

Homology

[Close]

BLAST of Csor.00g064960 vs. NCBI nr
Match: KAG6584235.1 (hypothetical protein SDJN03_20167, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019832.1 hypothetical protein SDJN02_18796, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 335 bits (859), Expect = 8.37e-116
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MGNCQAIDTASLIIQHPNGKVDRFYWPVNAGEIMKSNPGHYVALLISTKICPSKSTAGDR 60
           MGNCQAIDTASLIIQHPNGKVDRFYWPVNAGEIMKSNPGHYVALLISTKICPSKSTAGDR
Sbjct: 1   MGNCQAIDTASLIIQHPNGKVDRFYWPVNAGEIMKSNPGHYVALLISTKICPSKSTAGDR 60

Query: 61  RRHQDIQTNTTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTNQDVLQGLKAKQEAKMKRNS 120
           RRHQDIQTNTTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTNQDVLQGLKAKQEAKMKRNS
Sbjct: 61  RRHQDIQTNTTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTNQDVLQGLKAKQEAKMKRNS 120

Query: 121 MDFEGKDGNLEKGSEGEMNQGMKCEKNRAVSSAAKSRGWQPSLQSISEAGS 171
           MDFEGKDGNLEKGSEGEMNQGMKCEKNRAVSSAAKSRGWQPSLQSISEAGS
Sbjct: 121 MDFEGKDGNLEKGSEGEMNQGMKCEKNRAVSSAAKSRGWQPSLQSISEAGS 171

[Close]

BLAST of Csor.00g064960 vs. NCBI nr
Match: XP_022923864.1 (uncharacterized protein LOC111431455 [Cucurbita moschata])

HSP 1 Score: 330 bits (845), Expect = 1.14e-113
Identity = 169/171 (98.83%), Postives = 169/171 (98.83%), Query Frame = 0


Query: 1   MGNCQAIDTASLIIQHPNGKVDRFYWPVNAGEIMKSNPGHYVALLISTKICPSKSTAGDR 60
           MGNCQAIDTASLIIQHPNGKVDRFYWPVNAGEIMKSNPGHYVALLISTKICPSKSTAGDR
Sbjct: 1   MGNCQAIDTASLIIQHPNGKVDRFYWPVNAGEIMKSNPGHYVALLISTKICPSKSTAGDR 60

Query: 61  RRHQDIQTNTTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTNQDVLQGLKAKQEAKMKRNS 120
           RR  DIQTNTTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTNQDVLQGLKAKQEAKMKRNS
Sbjct: 61  RRDHDIQTNTTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTNQDVLQGLKAKQEAKMKRNS 120

Query: 121 MDFEGKDGNLEKGSEGEMNQGMKCEKNRAVSSAAKSRGWQPSLQSISEAGS 171
           MDFEGKDGNLEKGSEGEMNQGMKCEKNRAVSSAAKSRGWQPSLQSISEAGS
Sbjct: 121 MDFEGKDGNLEKGSEGEMNQGMKCEKNRAVSSAAKSRGWQPSLQSISEAGS 171

[Close]

BLAST of Csor.00g064960 vs. NCBI nr
Match: XP_023519579.1 (uncharacterized protein LOC111782953 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 328 bits (842), Expect = 3.27e-113
Identity = 168/171 (98.25%), Postives = 169/171 (98.83%), Query Frame = 0


Query: 1   MGNCQAIDTASLIIQHPNGKVDRFYWPVNAGEIMKSNPGHYVALLISTKICPSKSTAGDR 60
           MGNCQAIDTASLIIQHPNGKVDRFYWPVNAGEIMKSNPGHYVALLISTKICPSKSTAGDR
Sbjct: 1   MGNCQAIDTASLIIQHPNGKVDRFYWPVNAGEIMKSNPGHYVALLISTKICPSKSTAGDR 60

Query: 61  RRHQDIQTNTTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTNQDVLQGLKAKQEAKMKRNS 120
           RR  DIQTNTTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTNQDVLQGLKAKQEAKMKRNS
Sbjct: 61  RRDHDIQTNTTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTNQDVLQGLKAKQEAKMKRNS 120

Query: 121 MDFEGKDGNLEKGSEGEMNQGMKCEKNRAVSSAAKSRGWQPSLQSISEAGS 171
           +DFEGKDGNLEKGSEGEMNQGMKCEKNRAVSSAAKSRGWQPSLQSISEAGS
Sbjct: 121 LDFEGKDGNLEKGSEGEMNQGMKCEKNRAVSSAAKSRGWQPSLQSISEAGS 171

[Close]

BLAST of Csor.00g064960 vs. NCBI nr
Match: XP_023000947.1 (uncharacterized protein LOC111495231 [Cucurbita maxima])

HSP 1 Score: 326 bits (835), Expect = 3.82e-112
Identity = 167/171 (97.66%), Postives = 169/171 (98.83%), Query Frame = 0


Query: 1   MGNCQAIDTASLIIQHPNGKVDRFYWPVNAGEIMKSNPGHYVALLISTKICPSKSTAGDR 60
           MGNCQAIDTASLIIQHPNGKVDRFYWPVNAGEIMKSNPGHYVALLISTKICPSKSTA +R
Sbjct: 1   MGNCQAIDTASLIIQHPNGKVDRFYWPVNAGEIMKSNPGHYVALLISTKICPSKSTARER 60

Query: 61  RRHQDIQTNTTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTNQDVLQGLKAKQEAKMKRNS 120
           RR QDIQTNTTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTNQDVLQGLKAKQEAKMKRNS
Sbjct: 61  RRDQDIQTNTTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTNQDVLQGLKAKQEAKMKRNS 120

Query: 121 MDFEGKDGNLEKGSEGEMNQGMKCEKNRAVSSAAKSRGWQPSLQSISEAGS 171
           +DFEGKDGNLEKGSEGEMNQGMKCEKNRAVSSAAKSRGWQPSLQSISEAGS
Sbjct: 121 LDFEGKDGNLEKGSEGEMNQGMKCEKNRAVSSAAKSRGWQPSLQSISEAGS 171

[Close]

BLAST of Csor.00g064960 vs. NCBI nr
Match: XP_008438114.1 (PREDICTED: uncharacterized protein LOC103483316 [Cucumis melo] >TYJ99140.1 uncharacterized protein E5676_scaffold248G003460 [Cucumis melo var. makuwa])

HSP 1 Score: 273 bits (697), Expect = 5.27e-91
Identity = 145/178 (81.46%), Postives = 156/178 (87.64%), Query Frame = 0


Query: 1   MGNCQAIDTASLIIQHPNGKVDRFYWPVNAGEIMKSNPGHYVALLISTKICPSKSTAGD- 60
           MGNCQAIDTASLIIQHPNGKVDR YWPVNAGEIMK+NPGHYVALLISTK+C S++T+   
Sbjct: 1   MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQSETTSTHH 60

Query: 61  RRRHQDIQTNTTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTNQDVLQGLKAKQEAKMKRN 120
           RRR  + QTN+TNFNSVRLTRIKLLKPTDSLVLGQIYRLVT QDVLQGLKAKQEAK KRN
Sbjct: 61  RRRDNETQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTTQDVLQGLKAKQEAKKKRN 120

Query: 121 SMDFEGKDGNLEKGSEGEMNQGMKCEKNRA------VSSAAKSRGWQPSLQSISEAGS 171
            +DFEGK GN EKGSEGE+NQGMK E+NR       VS+AAKSRGWQPSLQSISE GS
Sbjct: 121 LLDFEGKQGNSEKGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISEGGS 178

[Close]

BLAST of Csor.00g064960 vs. ExPASy TrEMBL
Match: A0A6J1E7K0 (uncharacterized protein LOC111431455 OS=Cucurbita moschata OX=3662 GN=LOC111431455 PE=4 SV=1)

HSP 1 Score: 330 bits (845), Expect = 5.53e-114
Identity = 169/171 (98.83%), Postives = 169/171 (98.83%), Query Frame = 0


Query: 1   MGNCQAIDTASLIIQHPNGKVDRFYWPVNAGEIMKSNPGHYVALLISTKICPSKSTAGDR 60
           MGNCQAIDTASLIIQHPNGKVDRFYWPVNAGEIMKSNPGHYVALLISTKICPSKSTAGDR
Sbjct: 1   MGNCQAIDTASLIIQHPNGKVDRFYWPVNAGEIMKSNPGHYVALLISTKICPSKSTAGDR 60

Query: 61  RRHQDIQTNTTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTNQDVLQGLKAKQEAKMKRNS 120
           RR  DIQTNTTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTNQDVLQGLKAKQEAKMKRNS
Sbjct: 61  RRDHDIQTNTTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTNQDVLQGLKAKQEAKMKRNS 120

Query: 121 MDFEGKDGNLEKGSEGEMNQGMKCEKNRAVSSAAKSRGWQPSLQSISEAGS 171
           MDFEGKDGNLEKGSEGEMNQGMKCEKNRAVSSAAKSRGWQPSLQSISEAGS
Sbjct: 121 MDFEGKDGNLEKGSEGEMNQGMKCEKNRAVSSAAKSRGWQPSLQSISEAGS 171

[Close]

BLAST of Csor.00g064960 vs. ExPASy TrEMBL
Match: A0A6J1KF34 (uncharacterized protein LOC111495231 OS=Cucurbita maxima OX=3661 GN=LOC111495231 PE=4 SV=1)

HSP 1 Score: 326 bits (835), Expect = 1.85e-112
Identity = 167/171 (97.66%), Postives = 169/171 (98.83%), Query Frame = 0


Query: 1   MGNCQAIDTASLIIQHPNGKVDRFYWPVNAGEIMKSNPGHYVALLISTKICPSKSTAGDR 60
           MGNCQAIDTASLIIQHPNGKVDRFYWPVNAGEIMKSNPGHYVALLISTKICPSKSTA +R
Sbjct: 1   MGNCQAIDTASLIIQHPNGKVDRFYWPVNAGEIMKSNPGHYVALLISTKICPSKSTARER 60

Query: 61  RRHQDIQTNTTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTNQDVLQGLKAKQEAKMKRNS 120
           RR QDIQTNTTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTNQDVLQGLKAKQEAKMKRNS
Sbjct: 61  RRDQDIQTNTTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTNQDVLQGLKAKQEAKMKRNS 120

Query: 121 MDFEGKDGNLEKGSEGEMNQGMKCEKNRAVSSAAKSRGWQPSLQSISEAGS 171
           +DFEGKDGNLEKGSEGEMNQGMKCEKNRAVSSAAKSRGWQPSLQSISEAGS
Sbjct: 121 LDFEGKDGNLEKGSEGEMNQGMKCEKNRAVSSAAKSRGWQPSLQSISEAGS 171

[Close]

BLAST of Csor.00g064960 vs. ExPASy TrEMBL
Match: A0A5D3BH89 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003460 PE=4 SV=1)

HSP 1 Score: 273 bits (697), Expect = 2.55e-91
Identity = 145/178 (81.46%), Postives = 156/178 (87.64%), Query Frame = 0


Query: 1   MGNCQAIDTASLIIQHPNGKVDRFYWPVNAGEIMKSNPGHYVALLISTKICPSKSTAGD- 60
           MGNCQAIDTASLIIQHPNGKVDR YWPVNAGEIMK+NPGHYVALLISTK+C S++T+   
Sbjct: 1   MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQSETTSTHH 60

Query: 61  RRRHQDIQTNTTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTNQDVLQGLKAKQEAKMKRN 120
           RRR  + QTN+TNFNSVRLTRIKLLKPTDSLVLGQIYRLVT QDVLQGLKAKQEAK KRN
Sbjct: 61  RRRDNETQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTTQDVLQGLKAKQEAKKKRN 120

Query: 121 SMDFEGKDGNLEKGSEGEMNQGMKCEKNRA------VSSAAKSRGWQPSLQSISEAGS 171
            +DFEGK GN EKGSEGE+NQGMK E+NR       VS+AAKSRGWQPSLQSISE GS
Sbjct: 121 LLDFEGKQGNSEKGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISEGGS 178

[Close]

BLAST of Csor.00g064960 vs. ExPASy TrEMBL
Match: A0A1S3AV95 (uncharacterized protein LOC103483316 OS=Cucumis melo OX=3656 GN=LOC103483316 PE=4 SV=1)

HSP 1 Score: 273 bits (697), Expect = 2.55e-91
Identity = 145/178 (81.46%), Postives = 156/178 (87.64%), Query Frame = 0


Query: 1   MGNCQAIDTASLIIQHPNGKVDRFYWPVNAGEIMKSNPGHYVALLISTKICPSKSTAGD- 60
           MGNCQAIDTASLIIQHPNGKVDR YWPVNAGEIMK+NPGHYVALLISTK+C S++T+   
Sbjct: 1   MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQSETTSTHH 60

Query: 61  RRRHQDIQTNTTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTNQDVLQGLKAKQEAKMKRN 120
           RRR  + QTN+TNFNSVRLTRIKLLKPTDSLVLGQIYRLVT QDVLQGLKAKQEAK KRN
Sbjct: 61  RRRDNETQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTTQDVLQGLKAKQEAKKKRN 120

Query: 121 SMDFEGKDGNLEKGSEGEMNQGMKCEKNRA------VSSAAKSRGWQPSLQSISEAGS 171
            +DFEGK GN EKGSEGE+NQGMK E+NR       VS+AAKSRGWQPSLQSISE GS
Sbjct: 121 LLDFEGKQGNSEKGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISEGGS 178

[Close]

BLAST of Csor.00g064960 vs. ExPASy TrEMBL
Match: A0A0A0LU27 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045900 PE=4 SV=1)

HSP 1 Score: 271 bits (694), Expect = 7.31e-91
Identity = 145/178 (81.46%), Postives = 156/178 (87.64%), Query Frame = 0


Query: 1   MGNCQAIDTASLIIQHPNGKVDRFYWPVNAGEIMKSNPGHYVALLISTKICPSKSTAGD- 60
           MGNCQAIDTASLIIQHPNGKVDR YWPVNAGEIMK+NPGHYVALLISTK+C S++T+   
Sbjct: 1   MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQSETTSTHH 60

Query: 61  RRRHQDIQTNTTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTNQDVLQGLKAKQEAKMKRN 120
           RRR  D QTN+TNFNSVRLTRIKLLKPTDSLVLGQIYRLVT QDVLQGLKAKQEAK KRN
Sbjct: 61  RRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTTQDVLQGLKAKQEAKKKRN 120

Query: 121 SMDFEGKDGNLEKGSEGEMNQGMKCEKNRA------VSSAAKSRGWQPSLQSISEAGS 171
            ++FEGK GN EKGSEGE+NQGMK E+NR       VS+AAKSRGWQPSLQSISE GS
Sbjct: 121 LLEFEGKMGNSEKGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISEGGS 178

[Close]

BLAST of Csor.00g064960 vs. TAIR 10
Match: AT1G60010.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10530.1); Has 185 Blast hits to 185 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 180; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 140.6 bits (353), Expect = 1.2e-33
Identity = 83/182 (45.60%), Postives = 123/182 (67.58%), Query Frame = 0


Query: 1   MGNCQAIDTASLIIQHPNGKVDRFYWPVNAGEIMKSNPGHYVALLI--STKICPSKSTAG 60
           MGNCQA+D A+L++QHP+GK+DR+Y PV+  EIM+  PGHYV+L+I    K  P+ +T  
Sbjct: 1   MGNCQAVDAAALVLQHPDGKIDRYYGPVSVSEIMRMYPGHYVSLIIPLPEKNIPATTTTT 60

Query: 61  DRRRHQDIQTNTTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTNQDVLQGLKAKQEAKMKR 120
           D +  + +         VR TR+KLL+PT++LVLG  YRL+T+Q+V++ L+AK+ AK K+
Sbjct: 61  DDKSERKV---------VRFTRVKLLRPTENLVLGHAYRLITSQEVMKVLRAKKYAKTKK 120

Query: 121 NSMDF--EGKDGNLEK--GSEGEMNQGM--KCEKNRAV---SSAAKSRGWQPSLQSISEA 172
           +  +   E K  + EK    E + NQ +  K EK R+V   S++++S+ W+PSLQSISEA
Sbjct: 121 HQSETSKEKKKPSSEKKIDEESDKNQNLETKDEKQRSVLTNSASSRSKTWRPSLQSISEA 173

[Close]

BLAST of Csor.00g064960 vs. TAIR 10
Match: AT5G50090.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 135.2 bits (339), Expect = 5.0e-32
Identity = 82/175 (46.86%), Postives = 110/175 (62.86%), Query Frame = 0


Query: 1   MGNCQAIDTASLIIQHPNGKVDRFYWPVNAGEIMKSNPGHYVALLISTKICPSKSTAGDR 60
           MGNCQA+DTA ++IQHPNGK ++   PV+A  +MK NPGH V+LLIST    S S+    
Sbjct: 1   MGNCQAVDTARVVIQHPNGKEEKLSCPVSASYVMKMNPGHCVSLLISTTALSSASSG--- 60

Query: 61  RRHQDIQTNTTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTNQDVLQGLKAKQEAKMKRNS 120
                      +   +RLTRIKLL+PTD+LVLG +YRL+T ++V++GL AK+ +K+K+ S
Sbjct: 61  -----------HGGPLRLTRIKLLRPTDTLVLGHVYRLITTKEVMKGLMAKKCSKLKKES 120

Query: 121 MDFEGKDGNLEK----GSEGEMNQGMKCEKNRAVSSAAKSRGWQPSLQSISEAGS 172
              +G D  LE      S    N+  + E++R       SR WQPSLQSISE GS
Sbjct: 121 ---KGSDDKLEMVKAINSTKLDNEDQEKERSRI------SRSWQPSLQSISEGGS 152

[Close]

BLAST of Csor.00g064960 vs. TAIR 10
Match: AT5G50090.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 134.8 bits (338), Expect = 6.5e-32
Identity = 84/179 (46.93%), Postives = 110/179 (61.45%), Query Frame = 0


Query: 1   MGNCQAIDTASLIIQHPNGKVDRFYWPVNAGEIMKSNPGHYVALLISTKICPSKSTAGDR 60
           MGNCQA+DTA ++IQHPNGK ++   PV+A  +MK NPGH V+LLIST    S S+    
Sbjct: 1   MGNCQAVDTARVVIQHPNGKEEKLSCPVSASYVMKMNPGHCVSLLISTTALSSASSG--- 60

Query: 61  RRHQDIQTNTTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTNQDVLQGLKAKQEAKMKRNS 120
                      +   +RLTRIKLL+PTD+LVLG +YRL+T ++V++GL AK+ +K+K+ S
Sbjct: 61  -----------HGGPLRLTRIKLLRPTDTLVLGHVYRLITTKEVMKGLMAKKCSKLKKES 120

Query: 121 MDFEGKDGNLE--------KGSEGEMNQGMKCEKNRAVSSAAKSRGWQPSLQSISEAGS 172
              +G D  LE        K    +  Q  K EK R    +  SR WQPSLQSISE GS
Sbjct: 121 ---KGSDDKLEMVKAINSTKLDNEDQLQMKKQEKER----SRISRSWQPSLQSISEGGS 158

[Close]

BLAST of Csor.00g064960 vs. TAIR 10
Match: AT1G10530.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G60010.1); Has 143 Blast hits to 143 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 121.3 bits (303), Expect = 7.4e-28
Identity = 69/176 (39.20%), Postives = 105/176 (59.66%), Query Frame = 0


Query: 1   MGNCQAIDTASLIIQHPNGKVDRFYWPVNAGEIMKSNPGHYVALLI-----STKICPSKS 60
           MGNCQA++ A L++QHP G +DR+Y  V+  E+M   PGHYV+L+I       K  P+  
Sbjct: 1   MGNCQAVNAAVLVLQHPGGIIDRYYSSVSVTEVMAMYPGHYVSLIIPLSEEEEKNIPATE 60

Query: 61  TAGDRRRHQDIQTNTTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTNQDVLQGLKAKQEAK 120
              D+++ +          +VR TR++LL+PT++LVLG  YRL+T+Q+V++ L+ K+ AK
Sbjct: 61  KGDDKKQRK----------AVRFTRVQLLRPTENLVLGHAYRLITSQEVMKVLREKKSAK 120

Query: 121 MKRNSMDFEGKDGNLEKGSEGEMNQGMKCEKNRAVSSAAKSRGWQPSLQSISEAGS 172
            K++ ++              E  QG +    R  +S  KS+ W+PSLQSISEA S
Sbjct: 121 TKKHQIEKTTTAKKFSDKKVPEKKQGKQFRVIRNSTSLLKSKTWRPSLQSISEATS 166

[Close]

BLAST of Csor.00g064960 vs. TAIR 10
Match: AT5G62900.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G50090.1); Has 157 Blast hits to 157 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 119.0 bits (297), Expect = 3.7e-27
Identity = 71/182 (39.01%), Postives = 111/182 (60.99%), Query Frame = 0


Query: 1   MGNCQAIDTASLIIQHPNGKVDRFYWPVNAGEIMKSNPGHYVALLISTKICPSKSTAGDR 60
           MGNCQA + A+ +IQ P+GK  RFY  VNA E++KS+PGH+VALL+S+ +          
Sbjct: 1   MGNCQAAEAATTVIQQPDGKSVRFYCTVNASEVIKSHPGHHVALLLSSAV---------- 60

Query: 61  RRHQDIQTNTTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTNQDVLQGLKAKQEAKMKRNS 120
                      +  S+R+TRIKLL+P+D+L+LG +YRL+++++V++G++AK+  KMK+  
Sbjct: 61  ----------PHGGSLRVTRIKLLRPSDNLLLGHVYRLISSEEVMKGIRAKKSGKMKKIH 120

Query: 121 MDFEGKDGNL-------EKGSEGEMNQGMKCEKNRAVSSAA----KSRGWQPSLQSISEA 172
            +F   +  +       E  S+ +  + +  EK R + +      K R WQPSLQSISE+
Sbjct: 121 GEFSVAEEEINPLTLRSESASDKDTQRRIH-EKQRGMMNTGGATNKVRAWQPSLQSISES 161

The following BLAST results are available for this feature:

BLAST of Csor.00g064960 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g064960 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6584235.1	8.37e-116	100.00	hypothetical protein SDJN03_20167, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022923864.1	1.14e-113	98.83	uncharacterized protein LOC111431455 [Cucurbita moschata]	[more]
XP_023519579.1	3.27e-113	98.25	uncharacterized protein LOC111782953 [Cucurbita pepo subsp. pepo]	[more]
XP_023000947.1	3.82e-112	97.66	uncharacterized protein LOC111495231 [Cucurbita maxima]	[more]
XP_008438114.1	5.27e-91	81.46	PREDICTED: uncharacterized protein LOC103483316 [Cucumis melo] >TYJ99140.1 uncha...	[more]

BLAST of Csor.00g064960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E7K0	5.53e-114	98.83	uncharacterized protein LOC111431455 OS=Cucurbita moschata OX=3662 GN=LOC1114314...	[more]
A0A6J1KF34	1.85e-112	97.66	uncharacterized protein LOC111495231 OS=Cucurbita maxima OX=3661 GN=LOC111495231...	[more]
A0A5D3BH89	2.55e-91	81.46	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3AV95	2.55e-91	81.46	uncharacterized protein LOC103483316 OS=Cucumis melo OX=3656 GN=LOC103483316 PE=...	[more]
A0A0A0LU27	7.31e-91	81.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045900 PE=4 SV=1	[more]

BLAST of Csor.00g064960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60010.1	1.2e-33	45.60	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G50090.2	5.0e-32	46.86	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G50090.1	6.5e-32	46.93	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT1G10530.1	7.4e-28	39.20	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G62900.1	3.7e-27	39.01	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..168 e-value: 5.1E-28 score: 98.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..142
None	No IPR available	PANTHER	PTHR33413:SF28	DUF4228 DOMAIN PROTEIN	coord: 1..171
None	No IPR available	PANTHER	PTHR33413	EXPRESSED PROTEIN	coord: 1..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g064960.m01	Csor.00g064960.m01	mRNA