Csor.00g063880 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATATTCGGAACCTGCTAATGCTGAACGGGAGGTGATTCAAGTTAACAATGCTCAGAGGAAACCCAGGATTTTACTTGCTGCCAGTGGAAGTGTAGCTTCGATTAAGTTTGGGAATCTCTACCATTCTTTCTCCGAATGGGCAGACGTAAGAGCAGTGGCTACTAAGGCCTCTTTACACTTCATCGATCGAGCATCTCTTCCTAAGGATTACATACTTTACACCGATGAGGATGAGTGGAATGGTTGGAACAAAATTGGAGATAGTGTTCTTCATATTGAGCTTCGCCGCTGGGCTGATATCATGGTTATTGCCCCTCTGTCTGCAAACACGCTCGGCAAGGTACAGTAGTTTAACCAAGATTTAAATGCTTATTTCTGACCTCATTCTTCAAAATATGCCGAGTACGGGGCTGAATGTTACTCACACTTGGCACCCAATATATGGATTCTTGCTCCTCAAAATTGGGTTGGTCCGGAAATCTATCATCTTTGTGAATATATGATTTGGTTTCTAGTTGGTTTATTTGTTTTATTTGTTTTATCGGTTCCATTTTGGTTAAAGAGGTGTCTTGATGTCCAGCCTGTTTGTGTACACTTTTGAATGCTGCTTAGTTTAAACTGTTATTATGTGTATAGTTACGGATCCATCTATATTGGATTTGGCTCACATGATCCATTGTGACTGGTACCGTGTGTCTCAGAATTATTTAGCTGCTTTTCCTAAAGCTTCATTAGCTCAAGCCCTAAAATCACCGAAGAAAATAGAGTGTAACAGTTCAAAGAGGACAATATCTGCTAATGGTGGGCTTGAACTGTTACAAATGGTATCAGAGCTAGACATCCGACGGTGTGCCAGCAAGGACGCTAAGCCCCAAGGGGGTGGGTTGTGAGATCTCGCATTGGTTGGAGAGGAACGAAACATTTCTTATAAGGTTGTGGAAACCTCCCCTTAGAAGACGCGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGGGAAAATCCAAAGAGGACAATATGTGCTAGCGGTGGGCTTGGGTTGTTACATAGAGTCCTTTAGATATTTTGTTTAATGCAGTGTACTCCCATCATATGTAGCTTGCCCAATGTTTTAAGTTCTTTCCCTTGTCTACATTTTATACATTATACTTGAGTGAGTCAGAGGAACATTTTTTCCTTATCTTACTCTGTATCTTTTCACTGTAGCCTCTGTCTGTATTTGTAAATATTATGACGCATGGCAAGCTACCTTAAAAAATTCTTCTTGAACTTGATGCTATCGCTTGCTCTCTTTTTTTTCCCAGATTGCAGGCGGATTATGTGACAATCTATTGACTTGTGTCGTGCGAGCATGGGACTATAACAAGCCACTCTTTGTTGCGCCTGCCATGAATACCTTTATGTGGACCAACCCTTTCACCGAGCGACATCTCATTGCAATTGATGAGCTTGGAATAACTCTCATCCCACCTGTTACCAAGAGGCTAGCCTGTGGGGACTACGGCAATGGTGCAATGGCTGAACCTTCCTTAATCTTCTCAACTGTGAGACTCTTCTACGAGTCACGAATGCAACAAAGTGCCAAAAATGGTGAGTAG ATGGCATATTCGGAACCTGCTAATGCTGAACGGGAGGTGATTCAAGTTAACAATGCTCAGAGGAAACCCAGGATTTTACTTGCTGCCAGTGGAAGTGTAGCTTCGATTAAGTTTGGGAATCTCTACCATTCTTTCTCCGAATGGGCAGACGTAAGAGCAGTGGCTACTAAGGCCTCTTTACACTTCATCGATCGAGCATCTCTTCCTAAGGATTACATACTTTACACCGATGAGGATGAGTGGAATGGTTGGAACAAAATTGGAGATAGTGTTCTTCATATTGAGCTTCGCCGCTGGGCTGATATCATGGTTATTGCCCCTCTGTCTGCAAACACGCTCGGCAAGATTGCAGGCGGATTATGTGACAATCTATTGACTTGTGTCGTGCGAGCATGGGACTATAACAAGCCACTCTTTGTTGCGCCTGCCATGAATACCTTTATGTGGACCAACCCTTTCACCGAGCGACATCTCATTGCAATTGATGAGCTTGGAATAACTCTCATCCCACCTGTTACCAAGAGGCTAGCCTGTGGGGACTACGGCAATGGTGCAATGGCTGAACCTTCCTTAATCTTCTCAACTGTGAGACTCTTCTACGAGTCACGAATGCAACAAAGTGCCAAAAATGGTGAGTAG ATGGCATATTCGGAACCTGCTAATGCTGAACGGGAGGTGATTCAAGTTAACAATGCTCAGAGGAAACCCAGGATTTTACTTGCTGCCAGTGGAAGTGTAGCTTCGATTAAGTTTGGGAATCTCTACCATTCTTTCTCCGAATGGGCAGACGTAAGAGCAGTGGCTACTAAGGCCTCTTTACACTTCATCGATCGAGCATCTCTTCCTAAGGATTACATACTTTACACCGATGAGGATGAGTGGAATGGTTGGAACAAAATTGGAGATAGTGTTCTTCATATTGAGCTTCGCCGCTGGGCTGATATCATGGTTATTGCCCCTCTGTCTGCAAACACGCTCGGCAAGATTGCAGGCGGATTATGTGACAATCTATTGACTTGTGTCGTGCGAGCATGGGACTATAACAAGCCACTCTTTGTTGCGCCTGCCATGAATACCTTTATGTGGACCAACCCTTTCACCGAGCGACATCTCATTGCAATTGATGAGCTTGGAATAACTCTCATCCCACCTGTTACCAAGAGGCTAGCCTGTGGGGACTACGGCAATGGTGCAATGGCTGAACCTTCCTTAATCTTCTCAACTGTGAGACTCTTCTACGAGTCACGAATGCAACAAAGTGCCAAAAATGGTGAGTAG MAYSEPANAEREVIQVNNAQRKPRILLAASGSVASIKFGNLYHSFSEWADVRAVATKASLHFIDRASLPKDYILYTDEDEWNGWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCVVRAWDYNKPLFVAPAMNTFMWTNPFTERHLIAIDELGITLIPPVTKRLACGDYGNGAMAEPSLIFSTVRLFYESRMQQSAKNGE Homology
BLAST of Csor.00g063880 vs. ExPASy Swiss-Prot
Match: Q9SWE5 (Phosphopantothenoylcysteine decarboxylase OS=Arabidopsis thaliana OX=3702 GN=HAL3A PE=1 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 2.1e-93 Identity = 155/202 (76.73%), Postives = 180/202 (89.11%), Query Frame = 0
BLAST of Csor.00g063880 vs. ExPASy Swiss-Prot
Match: P94063 (Probable phosphopantothenoylcysteine decarboxylase OS=Arabidopsis thaliana OX=3702 GN=HAL3B PE=2 SV=2) HSP 1 Score: 331.6 bits (849), Expect = 6.3e-90 Identity = 150/193 (77.72%), Postives = 176/193 (91.19%), Query Frame = 0
BLAST of Csor.00g063880 vs. ExPASy Swiss-Prot
Match: Q69K55 (Phosphopantothenoylcysteine decarboxylase OS=Oryza sativa subsp. japonica OX=39947 GN=HAL3 PE=1 SV=1) HSP 1 Score: 313.2 bits (801), Expect = 2.3e-84 Identity = 146/177 (82.49%), Postives = 161/177 (90.96%), Query Frame = 0
BLAST of Csor.00g063880 vs. ExPASy Swiss-Prot
Match: Q8BZB2 (Phosphopantothenoylcysteine decarboxylase OS=Mus musculus OX=10090 GN=Ppcdc PE=1 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 7.3e-46 Identity = 93/196 (47.45%), Postives = 123/196 (62.76%), Query Frame = 0
BLAST of Csor.00g063880 vs. ExPASy Swiss-Prot
Match: Q96CD2 (Phosphopantothenoylcysteine decarboxylase OS=Homo sapiens OX=9606 GN=PPCDC PE=1 SV=2) HSP 1 Score: 180.3 bits (456), Expect = 2.4e-44 Identity = 91/192 (47.40%), Postives = 118/192 (61.46%), Query Frame = 0
BLAST of Csor.00g063880 vs. NCBI nr
Match: XP_022923809.1 (probable phosphopantothenoylcysteine decarboxylase [Cucurbita moschata] >XP_022923810.1 probable phosphopantothenoylcysteine decarboxylase [Cucurbita moschata] >XP_022923811.1 probable phosphopantothenoylcysteine decarboxylase [Cucurbita moschata] >XP_023001532.1 probable phosphopantothenoylcysteine decarboxylase [Cucurbita maxima] >XP_023001533.1 probable phosphopantothenoylcysteine decarboxylase [Cucurbita maxima] >XP_023001534.1 probable phosphopantothenoylcysteine decarboxylase [Cucurbita maxima] >XP_023520156.1 probable phosphopantothenoylcysteine decarboxylase [Cucurbita pepo subsp. pepo] >XP_023520157.1 probable phosphopantothenoylcysteine decarboxylase [Cucurbita pepo subsp. pepo] >KAG6584127.1 Phosphopantothenoylcysteine decarboxylase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 440 bits (1131), Expect = 6.38e-156 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of Csor.00g063880 vs. NCBI nr
Match: XP_038893749.1 (phosphopantothenoylcysteine decarboxylase-like [Benincasa hispida] >XP_038893750.1 phosphopantothenoylcysteine decarboxylase-like [Benincasa hispida]) HSP 1 Score: 424 bits (1091), Expect = 8.03e-150 Identity = 205/212 (96.70%), Postives = 207/212 (97.64%), Query Frame = 0
BLAST of Csor.00g063880 vs. NCBI nr
Match: XP_004152508.1 (probable phosphopantothenoylcysteine decarboxylase [Cucumis sativus] >XP_008439274.1 PREDICTED: probable phosphopantothenoylcysteine decarboxylase [Cucumis melo] >ADN33971.1 phosphopentothenoylcysteine decarboxylase [Cucumis melo subsp. melo] >KGN64370.1 hypothetical protein Csa_013857 [Cucumis sativus]) HSP 1 Score: 422 bits (1085), Expect = 6.60e-149 Identity = 202/212 (95.28%), Postives = 207/212 (97.64%), Query Frame = 0
BLAST of Csor.00g063880 vs. NCBI nr
Match: XP_022137667.1 (probable phosphopantothenoylcysteine decarboxylase [Momordica charantia] >XP_022137668.1 probable phosphopantothenoylcysteine decarboxylase [Momordica charantia] >XP_022137670.1 probable phosphopantothenoylcysteine decarboxylase [Momordica charantia] >XP_022137671.1 probable phosphopantothenoylcysteine decarboxylase [Momordica charantia] >XP_022137672.1 probable phosphopantothenoylcysteine decarboxylase [Momordica charantia] >XP_022137673.1 probable phosphopantothenoylcysteine decarboxylase [Momordica charantia]) HSP 1 Score: 421 bits (1082), Expect = 1.89e-148 Identity = 202/212 (95.28%), Postives = 208/212 (98.11%), Query Frame = 0
BLAST of Csor.00g063880 vs. NCBI nr
Match: KAG7019716.1 (GDSL esterase/lipase, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 435 bits (1119), Expect = 9.02e-148 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0
BLAST of Csor.00g063880 vs. ExPASy TrEMBL
Match: A0A6J1KQT4 (probable phosphopantothenoylcysteine decarboxylase OS=Cucurbita maxima OX=3661 GN=LOC111495645 PE=4 SV=1) HSP 1 Score: 440 bits (1131), Expect = 3.09e-156 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of Csor.00g063880 vs. ExPASy TrEMBL
Match: A0A6J1E7R1 (probable phosphopantothenoylcysteine decarboxylase OS=Cucurbita moschata OX=3662 GN=LOC111431412 PE=4 SV=1) HSP 1 Score: 440 bits (1131), Expect = 3.09e-156 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of Csor.00g063880 vs. ExPASy TrEMBL
Match: E5GBX2 (Phosphopentothenoylcysteine decarboxylase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 422 bits (1085), Expect = 3.20e-149 Identity = 202/212 (95.28%), Postives = 207/212 (97.64%), Query Frame = 0
BLAST of Csor.00g063880 vs. ExPASy TrEMBL
Match: A0A0A0LR29 (Flavoprotein domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G050090 PE=4 SV=1) HSP 1 Score: 422 bits (1085), Expect = 3.20e-149 Identity = 202/212 (95.28%), Postives = 207/212 (97.64%), Query Frame = 0
BLAST of Csor.00g063880 vs. ExPASy TrEMBL
Match: A0A1S3AZ24 (probable phosphopantothenoylcysteine decarboxylase OS=Cucumis melo OX=3656 GN=LOC103484104 PE=4 SV=1) HSP 1 Score: 422 bits (1085), Expect = 3.20e-149 Identity = 202/212 (95.28%), Postives = 207/212 (97.64%), Query Frame = 0
BLAST of Csor.00g063880 vs. TAIR 10
Match: AT3G18030.1 (HAL3-like protein A ) HSP 1 Score: 343.2 bits (879), Expect = 1.5e-94 Identity = 155/202 (76.73%), Postives = 180/202 (89.11%), Query Frame = 0
BLAST of Csor.00g063880 vs. TAIR 10
Match: AT1G48605.1 (Flavoprotein ) HSP 1 Score: 331.6 bits (849), Expect = 4.5e-91 Identity = 150/193 (77.72%), Postives = 176/193 (91.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|