Csor.00g062600 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g062600
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr14: 2796542 .. 2797225 (-)
RNA-Seq ExpressionCsor.00g062600
SyntenyCsor.00g062600
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAACTGCAAAATTGGGTGAAGAATTCAAAGTGGAGACCGCTGTTGCTGAAAACAATAAGTATAAACTTGTATTGGAAGGAGAGAAGCAAGGGATGTTGAAGATTGTCGGGTGAGGCCTATTAAAAGCACTGTAAGTTGTTTTGAATAGTATTGATTCTATTATTATACTTGTTTTGAGAAAAGTCAGGTGACAAAGTGAGATGAACTGAAGCAAGACAAGGAGTACAGTGGTGAGTTGAAATGGACCATCTGGAGTTCCTTGGGGATGTTGATGTATGGAGAATGGTCCAAAGTCTTAAAGGCATTTGATCACTGTAAGTAAGGTCATGCGGGTCCCTCAACATGTGAACACCACGAGGAGCCCCACAGGTACAACAATTCTCCTCACTCTCACCTTTACTCACCATGTTAAATTTTCAAGAGAATTCCTAGTTTCCATTCTGCTTAAAGGAACATGTTTATTTGCGTATTTTACACGCTTTACGATATCTTACACGAACTCTCTCTAGATTAAGAAGTTTGATTGAAGAACATTAGTAGGGACAGTGATTAGAATTCTGGTATGAAATCTATGCATTCTCTCTCTATGTGCGGCATTTTCTTCTCTAATATATACCATATGCCATGTAGGAGAGAATGGTGGGAACAGATGGGTATGTGAGGCATGTAAATCAATGTAG

mRNA sequence

ATGGAAACTGCAAAATTGGGTGAAGAATTCAAAGTGGAGACCGCTGTTGCTGAAAACAATAAGTATAAACTTGTATTGGAAGGAGAGAAGCAAGGGATGTTGAAGATTGTCGGTCAGGTGACAAAGCATTTGATCACTGTAAGTAAGGTCATGCGGGTCCCTCAACATGTGAACACCACGAGGAGCCCCACAGGAGAGAATGGTGGGAACAGATGGGTATGTGAGGCATGTAAATCAATGTAG

Coding sequence (CDS)

ATGGAAACTGCAAAATTGGGTGAAGAATTCAAAGTGGAGACCGCTGTTGCTGAAAACAATAAGTATAAACTTGTATTGGAAGGAGAGAAGCAAGGGATGTTGAAGATTGTCGGTCAGGTGACAAAGCATTTGATCACTGTAAGTAAGGTCATGCGGGTCCCTCAACATGTGAACACCACGAGGAGCCCCACAGGAGAGAATGGTGGGAACAGATGGGTATGTGAGGCATGTAAATCAATGTAG

Protein sequence

METAKLGEEFKVETAVAENNKYKLVLEGEKQGMLKIVGQVTKHLITVSKVMRVPQHVNTTRSPTGENGGNRWVCEACKSM
Homology
[Close]
BLAST of Csor.00g062600 vs. NCBI nr
Match: KAG6580927.1 (hypothetical protein SDJN03_20929, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 162 bits (410), Expect = 3.05e-50
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 1  METAKLGEEFKVETAVAENNKYKLVLEGEKQGMLKIVGQVTKHLITVSKVMRVPQHVNTT 60
          METAKLGEEFKVETAVAENNKYKLVLEGEKQGMLKIVGQVTKHLITVSKVMRVPQHVNTT
Sbjct: 1  METAKLGEEFKVETAVAENNKYKLVLEGEKQGMLKIVGQVTKHLITVSKVMRVPQHVNTT 60

Query: 61 RSPTGENGGNRWVCEACKSM 80
          RSPTGENGGNRWVCEACKSM
Sbjct: 61 RSPTGENGGNRWVCEACKSM 80

[Close]
BLAST of Csor.00g062600 vs. NCBI nr
Match: KAG7017670.1 (hypothetical protein SDJN02_19536, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 72.8 bits (177), Expect = 8.27e-15
Identity = 37/38 (97.37%), Postives = 38/38 (100.00%), Query Frame = 0 

Query: 1  METAKLGEEFKVETAVAENNKYKLVLEGEKQGMLKIVG 38
          METAKLGEEFKVETAVAENNKYKLVL+GEKQGMLKIVG
Sbjct: 35 METAKLGEEFKVETAVAENNKYKLVLKGEKQGMLKIVG 72

The following BLAST results are available for this feature:
BLAST of Csor.00g062600 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g062600 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6580927.13.05e-50100.00hypothetical protein SDJN03_20929, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7017670.18.27e-1597.37hypothetical protein SDJN02_19536, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Csor.00g062600 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g062600 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g062600.m01Csor.00g062600.m01mRNA