Csor.00g062480 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g062480
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Phytocyanin domain-containing protein
Location	Csor_Chr14: 2867418 .. 2868361 (-)
RNA-Seq Expression	Csor.00g062480
Synteny	Csor.00g062480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGTTCTAACAACAAGGGTCGGCGGCGTAGGGCTGCTGGTGGCTGCGGCGGTGGTTATGCTGACGGAAATGCCGGAAGTTTCGGCGACACGGTGGACTGTCGGTGGCAAGATGGGTTGGACGACCAATGTGAACTACACAATCTGGGCTGAGGGAAAACACTTCTATTACGATGACTGGCTCTGTAAGCACTTCAATTTATAGATCTGATGCGGATTTGTGTAGCTAATGAGTTGGTTTGTGGGTAATTTGGCGGTTGTTTGTGTTAGTTTTTGTGTACGACAGGAACCAAATGAATGTGTTGGAGGTGAACAAAACAGAGTATGAGAATTGCAATTCCGATCAGCCACTCCATAATTTCACCACCGGAGCTGGAAGAGATGTGGTTCATTTGAATGTCACCAGACCTTATTACTTCATTAGCGGTAAAGGGTTTTGCTACGGAGGCATGAAGCTCGCTATCCATGTCCGGCACCTGCCTCCGCCGCCCTCGGCCTCCCCCTTCAACGCTAAGAACAGTGCTCTGAGATCTTCTTACATCGGCCATACCCCATGCGTCTTGACCGCTGTTTTCGCCATCGCCGCTCTCCGGGAAGCTTTCCGCCGATTCTGGTAGAGACCACTCTTACTGAGTTCACATTCAACTTACTACACTTTTGTCTGGCCAATTTGTGCTCTTTTTTTTTTTTTTTCTTTTTTTTTTCTCGAAGTCGATTTGGTTTGGTTTGGTTCGGTTCGATTGGGTTAGATTTGTTTAATTTTAGTTCTCGATTTGAGTCTGAATCACCTTTTTATATCATTATGTTCTAAGTTTAGTCGGCTCAGCTCGTCCCCAACTAATGGAGAACTCTCTACTCGGGTGGTACCTTTTGTGGTCTCATTTTGGAGATGAATACCTCTTGACGACTAGGGTGTTCATGTCTCAACGTATTCAAGTATAA

mRNA sequence

ATGCAGGTTCTAACAACAAGGGTCGGCGGCGTAGGGCTGCTGGTGGCTGCGGCGGTGGTTATGCTGACGGAAATGCCGGAAGTTTCGGCGACACGGTGGACTGTCGGTGGCAAGATGGGTTGGACGACCAATGTGAACTACACAATCTGGGCTGAGGGAAAACACTTCTATTACGATGACTGGCTCTTTTTTGTGTACGACAGGAACCAAATGAATGTGTTGGAGGTGAACAAAACAGAGTATGAGAATTGCAATTCCGATCAGCCACTCCATAATTTCACCACCGGAGCTGGAAGAGATGTGGTTCATTTGAATGTCACCAGACCTTATTACTTCATTAGCGGTAAAGGGTTTTGCTACGGAGGCATGAAGCTCGCTATCCATGTCCGGCACCTGCCTCCGCCGCCCTCGGCCTCCCCCTTCAACGCTAAGAACAGTGCTCTGAGATCTTCTTACATCGGCCATACCCCATGCGTCTTGACCGCTGTTTTCGCCATCGCCGCTCTCCGGGAAGCTTTCCGCCGATTCTGTTTAGTCGGCTCAGCTCGTCCCCAACTAATGGAGAACTCTCTACTCGGGTGGTACCTTTTGTGGTCTCATTTTGGAGATGAATACCTCTTGACGACTAGGGTGTTCATGTCTCAACGTATTCAAGTATAA

Coding sequence (CDS)

ATGCAGGTTCTAACAACAAGGGTCGGCGGCGTAGGGCTGCTGGTGGCTGCGGCGGTGGTTATGCTGACGGAAATGCCGGAAGTTTCGGCGACACGGTGGACTGTCGGTGGCAAGATGGGTTGGACGACCAATGTGAACTACACAATCTGGGCTGAGGGAAAACACTTCTATTACGATGACTGGCTCTTTTTTGTGTACGACAGGAACCAAATGAATGTGTTGGAGGTGAACAAAACAGAGTATGAGAATTGCAATTCCGATCAGCCACTCCATAATTTCACCACCGGAGCTGGAAGAGATGTGGTTCATTTGAATGTCACCAGACCTTATTACTTCATTAGCGGTAAAGGGTTTTGCTACGGAGGCATGAAGCTCGCTATCCATGTCCGGCACCTGCCTCCGCCGCCCTCGGCCTCCCCCTTCAACGCTAAGAACAGTGCTCTGAGATCTTCTTACATCGGCCATACCCCATGCGTCTTGACCGCTGTTTTCGCCATCGCCGCTCTCCGGGAAGCTTTCCGCCGATTCTGTTTAGTCGGCTCAGCTCGTCCCCAACTAATGGAGAACTCTCTACTCGGGTGGTACCTTTTGTGGTCTCATTTTGGAGATGAATACCTCTTGACGACTAGGGTGTTCATGTCTCAACGTATTCAAGTATAA

Protein sequence

MQVLTTRVGGVGLLVAAAVVMLTEMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFYYDDWLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAIHVRHLPPPPSASPFNAKNSALRSSYIGHTPCVLTAVFAIAALREAFRRFCLVGSARPQLMENSLLGWYLLWSHFGDEYLLTTRVFMSQRIQV

Homology

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BLAST of Csor.00g062480 vs. ExPASy Swiss-Prot
Match: Q39131 (Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.9e-41
Identity = 82/162 (50.62%), Postives = 108/162 (66.67%), Query Frame = 0


Query: 15  VAAAVVMLTEMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFYYDDWLFFVYDRNQMNVL 74
           V  A +M   MP V+A ++TVG    W  N+NYTIWA+GKHFY  DWL+FV+DRNQ N+L
Sbjct: 11  VVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFDRNQHNIL 70

Query: 75  EVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAIHVRHLPP 134
           EVNKT+YE C +D P+ N+T GAGRD+V LN T+ YY + GKG CYGGMKL++ V  LPP
Sbjct: 71  EVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSVKVEKLPP 130

Query: 135 PPSASPFNAKNSALRSSYIGHTPCVL-TAVFAIAALREAFRR 176
           PP ++P   KN    S   G    ++  ++FA  A+ +   R
Sbjct: 131 PPKSAP--VKNIGSVSMVTGLAQFMIPVSLFAFPAMWDVISR 170

[Close]

BLAST of Csor.00g062480 vs. ExPASy Swiss-Prot
Match: Q96316 (Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.9e-12
Identity = 49/129 (37.98%), Postives = 69/129 (53.49%), Query Frame = 0


Query: 11  VGLLVAAAVVM-LTEMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFYYDDWLFFVYDRN 70
           +G  VAAA+++ L  +P V A  + VG   GWT+N++YT+W  GK F   D L FVY  +
Sbjct: 1   MGSTVAAALLLFLAAVPAVFAATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYGLS 60

Query: 71  QMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGK-GFCYGGMKLAIH 130
             +V  V+K  Y+NC+S     NF  G  +  + L      +F+    G C  GMKLA+ 
Sbjct: 61  H-SVSVVDKAGYDNCDSSGATQNFADGDTK--IDLTTVGTMHFLCPTFGHCKNGMKLAVP 120

Query: 131 VRHLPPPPS 138
           V    P PS
Sbjct: 121 VLAAAPSPS 126

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BLAST of Csor.00g062480 vs. ExPASy Swiss-Prot
Match: Q9SK27 (Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=2 SV=2)

HSP 1 Score: 73.9 bits (180), Expect = 2.5e-12
Identity = 47/121 (38.84%), Postives = 69/121 (57.02%), Query Frame = 0


Query: 29  SATRWTVGGKMG-W----TTNVNYTIWAEGKHFYYDDWLFFVYDRNQMNVLEVNKTEYEN 88
           +A   TVGGK G W    +++ ++T WA+   F   D++ F Y+  + +VLEV K  Y +
Sbjct: 27  AANEVTVGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYESGKDSVLEVTKEAYNS 86

Query: 89  CNSDQPLHNFTTGAGRDVVHLNVTRPYYFISG-KGFCYGGMKLAIHV---RHLPPPPSAS 141
           CN+  PL N+T G  +  V L+ + P+YFISG  G C  G KL++ V   RH    P+ S
Sbjct: 87  CNTTNPLANYTDGETK--VKLDRSGPFYFISGANGHCEKGQKLSLVVISPRHSVISPAPS 145

[Close]

BLAST of Csor.00g062480 vs. ExPASy Swiss-Prot
Match: Q9T076 (Early nodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g27520 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.1e-10
Identity = 44/138 (31.88%), Postives = 68/138 (49.28%), Query Frame = 0


Query: 29  SATRWTVGGKMGWTTN--VNYTIWAEGKHFYYDDWLFFVYDRNQMNVLEVNKTEYENCNS 88
           +A ++ VGG   W TN   NY  W+    F   D L+F Y +   +VLEVNK +Y+ CN+
Sbjct: 27  NARKFNVGGSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSVLEVNKADYDACNT 86

Query: 89  DQPLHNFTTGAGRDVVHLNVTRPYYFISG-KGFCYGGMKLAIHV--RHLP----PPPSAS 148
             P+     G     + L+   P+YFISG +  C  G KL + V    +P     P +A+
Sbjct: 87  KNPIKRVDDGDSE--ISLDRYGPFYFISGNEDNCKKGQKLNVVVISARIPSTAQSPHAAA 146

Query: 149 PFNAKNSALRSSYIGHTP 158
           P ++   ++      H+P
Sbjct: 147 PGSSTPGSMTPPGGAHSP 162

[Close]

BLAST of Csor.00g062480 vs. ExPASy Swiss-Prot
Match: A0A0M4FTF3 (Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 8.7e-10
Identity = 45/130 (34.62%), Postives = 62/130 (47.69%), Query Frame = 0


Query: 31  TRWTVGGKMGWTTNVNYTIWAEGKHFYYDDWLFFVYDRNQMNVLEVNKTEYENCNSDQPL 90
           T + VG   GWT +V+Y  WA+GK F   D L F Y +   NV +VN+T ++NC +  P 
Sbjct: 116 TEYWVGDDKGWTIDVDYQAWAKGKTFKVGDTLVFKYTKGHHNVFKVNQTGFQNCIAPPPS 175

Query: 91  HNFTTGAGRDVVHLNVTRPYYFISG--KGFCYGGMKLAIHVRHLP---PP---PSASPFN 150
              T  +G DV+ L      ++I G          KLAI V   P   PP   P+ +P  
Sbjct: 176 EGLT--SGHDVITLAAPGKKWYICGFPTHCSEHKQKLAITVEGAPAQTPPVWAPAPAPGT 235

Query: 151 AKNSALRSSY 153
            K     +SY
Sbjct: 236 PKKIDTGNSY 243

[Close]

BLAST of Csor.00g062480 vs. NCBI nr
Match: KAG6580939.1 (Lamin-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 453 bits (1165), Expect = 7.15e-161
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MQVLTTRVGGVGLLVAAAVVMLTEMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFYYDD 60
           MQVLTTRVGGVGLLVAAAVVMLTEMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFYYDD
Sbjct: 1   MQVLTTRVGGVGLLVAAAVVMLTEMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFYYDD 60

Query: 61  WLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCY 120
           WLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCY
Sbjct: 61  WLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCY 120

Query: 121 GGMKLAIHVRHLPPPPSASPFNAKNSALRSSYIGHTPCVLTAVFAIAALREAFRRFCLVG 180
           GGMKLAIHVRHLPPPPSASPFNAKNSALRSSYIGHTPCVLTAVFAIAALREAFRRFCLVG
Sbjct: 121 GGMKLAIHVRHLPPPPSASPFNAKNSALRSSYIGHTPCVLTAVFAIAALREAFRRFCLVG 180

Query: 181 SARPQLMENSLLGWYLLWSHFGDEYLLTTRVFMSQRIQV 219
           SARPQLMENSLLGWYLLWSHFGDEYLLTTRVFMSQRIQV
Sbjct: 181 SARPQLMENSLLGWYLLWSHFGDEYLLTTRVFMSQRIQV 219

[Close]

BLAST of Csor.00g062480 vs. NCBI nr
Match: KAG7017684.1 (Lamin-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 363 bits (932), Expect = 5.32e-126
Identity = 175/176 (99.43%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MQVLTTRVGGVGLLVAAAVVMLTEMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFYYDD 60
           MQVLTTRVGGVGLLVAAAVVMLTEMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFYYDD
Sbjct: 1   MQVLTTRVGGVGLLVAAAVVMLTEMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFYYDD 60

Query: 61  WLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCY 120
           WLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCY
Sbjct: 61  WLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCY 120

Query: 121 GGMKLAIHVRHLPPPPSASPFNAKNSALRSSYIGHTPCVLTAVFAIAALREAFRRF 176
           GGMKLAIHVRHLPPPPSASPFNAKNSALRSSYIGHTPCVLTAVF+IAALREAFRRF
Sbjct: 121 GGMKLAIHVRHLPPPPSASPFNAKNSALRSSYIGHTPCVLTAVFSIAALREAFRRF 176

[Close]

BLAST of Csor.00g062480 vs. NCBI nr
Match: XP_022935116.1 (lamin-like protein [Cucurbita moschata])

HSP 1 Score: 356 bits (913), Expect = 1.21e-122
Identity = 173/176 (98.30%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 1   MQVLTTRVGGVGLLVAAAVVMLTEMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFYYDD 60
           MQVLTTRVGGVGLLVAAAVVMLT MPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFYYDD
Sbjct: 31  MQVLTTRVGGVGLLVAAAVVMLTAMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFYYDD 90

Query: 61  WLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCY 120
           WLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCY
Sbjct: 91  WLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCY 150

Query: 121 GGMKLAIHVRHLPPPPSASPFNAKNSALRSSYIGHTPCVLTAVFAIAALREAFRRF 176
           GGMKLAIHVRHLPPPPSASPFNAK+SALRSSYIGHTP VLTAVFAIAALREAFRRF
Sbjct: 151 GGMKLAIHVRHLPPPPSASPFNAKSSALRSSYIGHTPFVLTAVFAIAALREAFRRF 206

[Close]

BLAST of Csor.00g062480 vs. NCBI nr
Match: XP_022983879.1 (lamin-like protein [Cucurbita maxima])

HSP 1 Score: 341 bits (874), Expect = 3.68e-117
Identity = 167/176 (94.89%), Postives = 169/176 (96.02%), Query Frame = 0


Query: 1   MQVLTTRVGGVGLLVAAAVVMLTEMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFYYDD 60
           MQVL TRVGGVGLLVAAAVV+LT M EVSATRWTVGGKMGWTTNVNYTIWAEGKHFYYDD
Sbjct: 1   MQVLRTRVGGVGLLVAAAVVVLTAMSEVSATRWTVGGKMGWTTNVNYTIWAEGKHFYYDD 60

Query: 61  WLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCY 120
           WLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVT PYYFISGKGFCY
Sbjct: 61  WLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTGPYYFISGKGFCY 120

Query: 121 GGMKLAIHVRHLPPPPSASPFNAKNSALRSSYIGHTPCVLTAVFAIAALREAFRRF 176
           GGMKLAIHV HLPPPPSASPFNAK+SALRSSYI HTP VLTAVFAIAALREAFRRF
Sbjct: 121 GGMKLAIHVWHLPPPPSASPFNAKSSALRSSYIAHTPFVLTAVFAIAALREAFRRF 176

[Close]

BLAST of Csor.00g062480 vs. NCBI nr
Match: XP_023528207.1 (lamin-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 335 bits (859), Expect = 7.63e-115
Identity = 166/178 (93.26%), Postives = 168/178 (94.38%), Query Frame = 0


Query: 1   MQVLTTRVGGVGLLVAAAV--VMLTEMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFYY 60
           MQVL TRVGGV LLVAAA   VMLT MPEVSATRWTVGGKMGWTTNVNYT+WAEGKHFYY
Sbjct: 1   MQVLRTRVGGVWLLVAAAAAAVMLTAMPEVSATRWTVGGKMGWTTNVNYTMWAEGKHFYY 60

Query: 61  DDWLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKGF 120
           DDWLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKGF
Sbjct: 61  DDWLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKGF 120

Query: 121 CYGGMKLAIHVRHLPPPPSASPFNAKNSALRSSYIGHTPCVLTAVFAIAALREAFRRF 176
           CYGGMKLAIHVRHLPPPPSASPFNA +SALRSSYI HTP VLTAVFAIAALREAF RF
Sbjct: 121 CYGGMKLAIHVRHLPPPPSASPFNATSSALRSSYIAHTPFVLTAVFAIAALREAFCRF 178

[Close]

BLAST of Csor.00g062480 vs. ExPASy TrEMBL
Match: A0A6J1F3N0 (lamin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111442083 PE=4 SV=1)

HSP 1 Score: 356 bits (913), Expect = 5.86e-123
Identity = 173/176 (98.30%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 1   MQVLTTRVGGVGLLVAAAVVMLTEMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFYYDD 60
           MQVLTTRVGGVGLLVAAAVVMLT MPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFYYDD
Sbjct: 31  MQVLTTRVGGVGLLVAAAVVMLTAMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFYYDD 90

Query: 61  WLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCY 120
           WLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCY
Sbjct: 91  WLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCY 150

Query: 121 GGMKLAIHVRHLPPPPSASPFNAKNSALRSSYIGHTPCVLTAVFAIAALREAFRRF 176
           GGMKLAIHVRHLPPPPSASPFNAK+SALRSSYIGHTP VLTAVFAIAALREAFRRF
Sbjct: 151 GGMKLAIHVRHLPPPPSASPFNAKSSALRSSYIGHTPFVLTAVFAIAALREAFRRF 206

[Close]

BLAST of Csor.00g062480 vs. ExPASy TrEMBL
Match: A0A6J1J8R9 (lamin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482361 PE=4 SV=1)

HSP 1 Score: 341 bits (874), Expect = 1.78e-117
Identity = 167/176 (94.89%), Postives = 169/176 (96.02%), Query Frame = 0


Query: 1   MQVLTTRVGGVGLLVAAAVVMLTEMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFYYDD 60
           MQVL TRVGGVGLLVAAAVV+LT M EVSATRWTVGGKMGWTTNVNYTIWAEGKHFYYDD
Sbjct: 1   MQVLRTRVGGVGLLVAAAVVVLTAMSEVSATRWTVGGKMGWTTNVNYTIWAEGKHFYYDD 60

Query: 61  WLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCY 120
           WLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVT PYYFISGKGFCY
Sbjct: 61  WLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTGPYYFISGKGFCY 120

Query: 121 GGMKLAIHVRHLPPPPSASPFNAKNSALRSSYIGHTPCVLTAVFAIAALREAFRRF 176
           GGMKLAIHV HLPPPPSASPFNAK+SALRSSYI HTP VLTAVFAIAALREAFRRF
Sbjct: 121 GGMKLAIHVWHLPPPPSASPFNAKSSALRSSYIAHTPFVLTAVFAIAALREAFRRF 176

[Close]

BLAST of Csor.00g062480 vs. ExPASy TrEMBL
Match: A0A5D3DPZ3 (Lamin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007610 PE=4 SV=1)

HSP 1 Score: 305 bits (782), Expect = 2.06e-103
Identity = 149/178 (83.71%), Postives = 158/178 (88.76%), Query Frame = 0


Query: 1   MQVLTTRVGGVGLLVAAA---VVMLTEMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFY 60
           M+VL TRVGG GLLVA A   VV+L  +PEVSATRWTVGG MGWTTNVNY+ WA+GKHFY
Sbjct: 1   MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFY 60

Query: 61  YDDWLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120
           YDDWLFFVYDRNQMNVLEVNKT+YENC SD PLHNFTTGAGRDVVHLNVTRPYYFISGKG
Sbjct: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120

Query: 121 FCYGGMKLAIHVRHLPPPPSASPFNAKNSALRSSYIGHTPCVLTAVFAIAALREAFRR 175
           FCYGGMKLAIHV HLPPPPSA P N K+SALRS+Y GHTP VLTAVFAIAA+ EAF R
Sbjct: 121 FCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAIAAVFEAFSR 178

[Close]

BLAST of Csor.00g062480 vs. ExPASy TrEMBL
Match: A0A1S3B7D2 (lamin-like protein OS=Cucumis melo OX=3656 GN=LOC103486966 PE=4 SV=1)

HSP 1 Score: 305 bits (782), Expect = 2.06e-103
Identity = 149/178 (83.71%), Postives = 158/178 (88.76%), Query Frame = 0


Query: 1   MQVLTTRVGGVGLLVAAA---VVMLTEMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFY 60
           M+VL TRVGG GLLVA A   VV+L  +PEVSATRWTVGG MGWTTNVNY+ WA+GKHFY
Sbjct: 1   MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFY 60

Query: 61  YDDWLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120
           YDDWLFFVYDRNQMNVLEVNKT+YENC SD PLHNFTTGAGRDVVHLNVTRPYYFISGKG
Sbjct: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120

Query: 121 FCYGGMKLAIHVRHLPPPPSASPFNAKNSALRSSYIGHTPCVLTAVFAIAALREAFRR 175
           FCYGGMKLAIHV HLPPPPSA P N K+SALRS+Y GHTP VLTAVFAIAA+ EAF R
Sbjct: 121 FCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAIAAVFEAFSR 178

[Close]

BLAST of Csor.00g062480 vs. ExPASy TrEMBL
Match: A0A0A0LC11 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G824220 PE=4 SV=1)

HSP 1 Score: 300 bits (767), Expect = 3.82e-101
Identity = 145/177 (81.92%), Postives = 156/177 (88.14%), Query Frame = 0


Query: 1   MQVLTTRVGGVGLLVAAA--VVMLTEMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFYY 60
           M+VL TRVGG GLLVA A  V++L  +PEVSATRWTVGG MGW TNVNYT WA+GKHFYY
Sbjct: 1   MEVLRTRVGGSGLLVAVAAVVILLAAVPEVSATRWTVGGNMGWNTNVNYTTWAQGKHFYY 60

Query: 61  DDWLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKGF 120
           DDWLFFVYDRNQMNVLEVNKT+YENC SD PLHNFTTGAGRDVVHLNVTRPYYFISGKGF
Sbjct: 61  DDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGF 120

Query: 121 CYGGMKLAIHVRHLPPPPSASPFNAKNSALRSSYIGHTPCVLTAVFAIAALREAFRR 175
           C+GGMKLAIHV HLPPPPS+SP N K+SALRS+  GHTP VLTAVFAIAA+ E F R
Sbjct: 121 CFGGMKLAIHVEHLPPPPSSSPLNEKSSALRSTNTGHTPFVLTAVFAIAAVLEVFTR 177

[Close]

BLAST of Csor.00g062480 vs. TAIR 10
Match: AT3G01070.1 (early nodulin-like protein 16 )

HSP 1 Score: 170.6 bits (431), Expect = 1.4e-42
Identity = 91/165 (55.15%), Postives = 112/165 (67.88%), Query Frame = 0


Query: 11  VGLLVAAAVV-MLTEMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFYYDDWLFFVYDRN 70
           V +LVA AV+  L     V+A RWTVG    W  N+NYTIWA+ KHFY DDWL+FVY+RN
Sbjct: 4   VAVLVAGAVLAFLLAATNVTAKRWTVGDNKFWNPNINYTIWAQDKHFYLDDWLYFVYERN 63

Query: 71  QMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGK-GFCYGGMKLAIH 130
           Q NV+EVN+T Y +CN + P+ N++ GAGRD+VHLNVTR YY ISG  G CYGGMKLA+ 
Sbjct: 64  QYNVIEVNETNYISCNPNNPIANWSRGAGRDLVHLNVTRHYYLISGNGGGCYGGMKLAVL 123

Query: 131 VRHLPPPPSASPFNAKNSALRS---SYIGHTPCVLTAVFAIAALR 171
           V   PPPP+A+P   KNSA R+   S   +   +  AVFA    R
Sbjct: 124 VEKPPPPPAAAP--NKNSARRTFSVSGFAYQFLIPVAVFAAVGTR 166

[Close]

BLAST of Csor.00g062480 vs. TAIR 10
Match: AT5G15350.1 (early nodulin-like protein 17 )

HSP 1 Score: 170.6 bits (431), Expect = 1.4e-42
Identity = 82/162 (50.62%), Postives = 108/162 (66.67%), Query Frame = 0


Query: 15  VAAAVVMLTEMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFYYDDWLFFVYDRNQMNVL 74
           V  A +M   MP V+A ++TVG    W  N+NYTIWA+GKHFY  DWL+FV+DRNQ N+L
Sbjct: 11  VVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFDRNQHNIL 70

Query: 75  EVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAIHVRHLPP 134
           EVNKT+YE C +D P+ N+T GAGRD+V LN T+ YY + GKG CYGGMKL++ V  LPP
Sbjct: 71  EVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSVKVEKLPP 130

Query: 135 PPSASPFNAKNSALRSSYIGHTPCVL-TAVFAIAALREAFRR 176
           PP ++P   KN    S   G    ++  ++FA  A+ +   R
Sbjct: 131 PPKSAP--VKNIGSVSMVTGLAQFMIPVSLFAFPAMWDVISR 170

[Close]

BLAST of Csor.00g062480 vs. TAIR 10
Match: AT4G12880.1 (early nodulin-like protein 19 )

HSP 1 Score: 146.0 bits (367), Expect = 3.6e-35
Identity = 65/126 (51.59%), Postives = 88/126 (69.84%), Query Frame = 0


Query: 15  VAAAVVMLTEMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFYYDDWLFFVYDRNQMNVL 74
           V  A ++   +PEV+A ++ VG K  W  N+NYT+WA+GKHFY  DWL+FV+ R+Q N+L
Sbjct: 11  VVLAFLVAAPIPEVTAKKYLVGDKKFWNPNINYTLWAQGKHFYVGDWLYFVFYRDQHNIL 70

Query: 75  EVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAIHVRHLPP 134
           EVNK +YE C S++P+ N+T GAGRD+V L  TR YY + G+G C  GMKL + V   PP
Sbjct: 71  EVNKADYEKCISNRPIRNYTRGAGRDIVPLYETRRYYLLDGRGGCVQGMKLDVLVETPPP 130

Query: 135 PPSASP 141
           PP  +P
Sbjct: 131 PPPFTP 136

[Close]

BLAST of Csor.00g062480 vs. TAIR 10
Match: AT2G27035.1 (early nodulin-like protein 20 )

HSP 1 Score: 109.4 bits (272), Expect = 3.7e-24
Identity = 65/166 (39.16%), Postives = 94/166 (56.63%), Query Frame = 0


Query: 14  LVAAAVVMLTEMPEVSATRWTV-GGKMGWTTNVNYTIWAEGKHFYYDDWLFFVYDRNQMN 73
           LV   V++L  + EV ++   V GG+  W ++VN++ WA  + FY  DWL+F ++R + N
Sbjct: 9   LVYVTVMILIIVVEVESSLHRVGGGRYTWNSDVNFSDWANHQRFYSGDWLYFGFNRTRHN 68

Query: 74  VLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAIHVRHL 133
           +L+VNK+ YE C  +  + N T G GRDV  L   +PYYFI G+G+C  GMKLAI V  L
Sbjct: 69  ILQVNKSSYEQCVDNDYIFNITRG-GRDVFQLLEPKPYYFICGRGYCLKGMKLAITV--L 128

Query: 134 PPPPSASPFNAKNSALRSSYIGHTPCVLTAVFAIAALREAFRRFCL 179
           P PP ++P N  ++         TP +       A L  AF+   L
Sbjct: 129 PQPPPSAPTNFTSTT--------TPLIPPNAITAAILIFAFKALLL 163

[Close]

BLAST of Csor.00g062480 vs. TAIR 10
Match: AT4G12880.2 (early nodulin-like protein 19 )

HSP 1 Score: 93.2 bits (230), Expect = 2.8e-19
Identity = 43/85 (50.59%), Postives = 59/85 (69.41%), Query Frame = 0


Query: 56  FYYDDWLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISG 115
           F+++  L FV+ R+Q N+LEVNK +YE C S++P+ N+T GAGRD+V L  TR YY + G
Sbjct: 14  FFFNFSLNFVFYRDQHNILEVNKADYEKCISNRPIRNYTRGAGRDIVPLYETRRYYLLDG 73

Query: 116 KGFCYGGMKLAIHVRHLPPPPSASP 141
           +G C  GMKL + V   PPPP  +P
Sbjct: 74  RGGCVQGMKLDVLVETPPPPPPFTP 98

The following BLAST results are available for this feature:

BLAST of Csor.00g062480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39131	1.9e-41	50.62	Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1	[more]
Q96316	1.9e-12	37.98	Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1	[more]
Q9SK27	2.5e-12	38.84	Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=2 S...	[more]
Q9T076	5.1e-10	31.88	Early nodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g27520 PE=1 S...	[more]
A0A0M4FTF3	8.7e-10	34.62	Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1	[more]

BLAST of Csor.00g062480 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6580939.1	7.15e-161	100.00	Lamin-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7017684.1	5.32e-126	99.43	Lamin-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022935116.1	1.21e-122	98.30	lamin-like protein [Cucurbita moschata]	[more]
XP_022983879.1	3.68e-117	94.89	lamin-like protein [Cucurbita maxima]	[more]
XP_023528207.1	7.63e-115	93.26	lamin-like protein [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g062480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F3N0	5.86e-123	98.30	lamin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111442083 PE=4 SV=1	[more]
A0A6J1J8R9	1.78e-117	94.89	lamin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482361 PE=4 SV=1	[more]
A0A5D3DPZ3	2.06e-103	83.71	Lamin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G0...	[more]
A0A1S3B7D2	2.06e-103	83.71	lamin-like protein OS=Cucumis melo OX=3656 GN=LOC103486966 PE=4 SV=1	[more]
A0A0A0LC11	3.82e-101	81.92	Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G824220...	[more]

BLAST of Csor.00g062480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01070.1	1.4e-42	55.15	early nodulin-like protein 16	[more]
AT5G15350.1	1.4e-42	50.62	early nodulin-like protein 17	[more]
AT4G12880.1	3.6e-35	51.59	early nodulin-like protein 19	[more]
AT2G27035.1	3.7e-24	39.16	early nodulin-like protein 20	[more]
AT4G12880.2	2.8e-19	50.59	early nodulin-like protein 19	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 29..132 e-value: 1.8E-29 score: 104.0
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 30..129
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 41..123 e-value: 6.9E-21 score: 74.1
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 31..131 score: 34.247749
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 13..169
None	No IPR available	PANTHER	PTHR33021:SF231	LAMIN-LIKE PROTEIN	coord: 13..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g062480.m01	Csor.00g062480.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009055	electron transfer activity