Csor.00g061950 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTATAAAGGGATGAGCAGAAGCAGAAGCTTGTCTGAGAAAATGGATGGTATTGCTCCACTTGCAATTGGCACGCGAGGCACTGTGGGGTCGCTGGTGATGAAGGAGATTGAGTACTTCACCAAGTTTGAGGTGGAACGCCATGGCAGCTCTCAGAGGATAAGTGGAGATGCTTCGAGGAGAAGCGATTGTAAGGGAAGCTTTTGGCTTGTGTCCTTGACTTGGAAGTGGAAGAAGAGAAAAGGCAATAATGGGATTCTCCCCAACATTTGCAGTGCTGTTGAATTGTCAAAAAGCAATCGCTTCAATGGGATTCCTGGTTTCAGTTACAGGATTCTCAAACACGACTTTCCCATTTGA ATGTATAAAGGGATGAGCAGAAGCAGAAGCTTGTCTGAGAAAATGGATGGTATTGCTCCACTTGCAATTGGCACGCGAGGCACTGTGGGGTCGCTGGTGATGAAGGAGATTGAGTACTTCACCAAGTTTGAGGTGGAACGCCATGGCAGCTCTCAGAGGATAAGTGGAGATGCTTCGAGGAGAAGCGATTGTAAGGGAAGCTTTTGGCTTGTGTCCTTGACTTGGAAGTGGAAGAAGAGAAAAGGCAATAATGGGATTCTCCCCAACATTTGCAGTGCTGTTGAATTGTCAAAAAGCAATCGCTTCAATGGGATTCCTGGTTTCAGTTACAGGATTCTCAAACACGACTTTCCCATTTGA ATGTATAAAGGGATGAGCAGAAGCAGAAGCTTGTCTGAGAAAATGGATGGTATTGCTCCACTTGCAATTGGCACGCGAGGCACTGTGGGGTCGCTGGTGATGAAGGAGATTGAGTACTTCACCAAGTTTGAGGTGGAACGCCATGGCAGCTCTCAGAGGATAAGTGGAGATGCTTCGAGGAGAAGCGATTGTAAGGGAAGCTTTTGGCTTGTGTCCTTGACTTGGAAGTGGAAGAAGAGAAAAGGCAATAATGGGATTCTCCCCAACATTTGCAGTGCTGTTGAATTGTCAAAAAGCAATCGCTTCAATGGGATTCCTGGTTTCAGTTACAGGATTCTCAAACACGACTTTCCCATTTGA MYKGMSRSRSLSEKMDGIAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASRRSDCKGSFWLVSLTWKWKKRKGNNGILPNICSAVELSKSNRFNGIPGFSYRILKHDFPI Homology
BLAST of Csor.00g061950 vs. NCBI nr
Match: KAG6603769.1 (hypothetical protein SDJN03_04378, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 247 bits (631), Expect = 9.99e-83 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of Csor.00g061950 vs. NCBI nr
Match: XP_022977336.1 (uncharacterized protein LOC111477686 [Cucurbita maxima]) HSP 1 Score: 246 bits (627), Expect = 4.07e-82 Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0
BLAST of Csor.00g061950 vs. NCBI nr
Match: XP_023544018.1 (uncharacterized protein LOC111803725 [Cucurbita pepo subsp. pepo] >KAG7033938.1 hypothetical protein SDJN02_03664, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 220 bits (561), Expect = 3.03e-72 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of Csor.00g061950 vs. NCBI nr
Match: XP_038882225.1 (uncharacterized protein LOC120073447 [Benincasa hispida]) HSP 1 Score: 217 bits (553), Expect = 7.92e-71 Identity = 104/119 (87.39%), Postives = 107/119 (89.92%), Query Frame = 0
BLAST of Csor.00g061950 vs. NCBI nr
Match: XP_011658506.1 (uncharacterized protein LOC105436036 [Cucumis sativus]) HSP 1 Score: 207 bits (526), Expect = 1.07e-66 Identity = 101/120 (84.17%), Postives = 107/120 (89.17%), Query Frame = 0
BLAST of Csor.00g061950 vs. ExPASy TrEMBL
Match: A0A6J1IJL8 (uncharacterized protein LOC111477686 OS=Cucurbita maxima OX=3661 GN=LOC111477686 PE=4 SV=1) HSP 1 Score: 246 bits (627), Expect = 1.97e-82 Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0
BLAST of Csor.00g061950 vs. ExPASy TrEMBL
Match: A0A0A0KL84 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G514830 PE=4 SV=1) HSP 1 Score: 207 bits (526), Expect = 5.19e-67 Identity = 101/120 (84.17%), Postives = 107/120 (89.17%), Query Frame = 0
BLAST of Csor.00g061950 vs. ExPASy TrEMBL
Match: A0A5D3CRM5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006580 PE=4 SV=1) HSP 1 Score: 204 bits (520), Expect = 4.27e-66 Identity = 101/120 (84.17%), Postives = 105/120 (87.50%), Query Frame = 0
BLAST of Csor.00g061950 vs. ExPASy TrEMBL
Match: A0A1S3B3D8 (uncharacterized protein LOC103485325 OS=Cucumis melo OX=3656 GN=LOC103485325 PE=4 SV=1) HSP 1 Score: 204 bits (520), Expect = 4.27e-66 Identity = 101/120 (84.17%), Postives = 105/120 (87.50%), Query Frame = 0
BLAST of Csor.00g061950 vs. ExPASy TrEMBL
Match: A0A6J1EEE9 (uncharacterized protein LOC111433571 OS=Cucurbita moschata OX=3662 GN=LOC111433571 PE=4 SV=1) HSP 1 Score: 202 bits (514), Expect = 3.74e-65 Identity = 98/122 (80.33%), Postives = 108/122 (88.52%), Query Frame = 0
BLAST of Csor.00g061950 vs. TAIR 10
Match: AT4G21780.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 83.2 bits (204), Expect = 1.6e-16 Identity = 48/109 (44.04%), Postives = 62/109 (56.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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