Csor.00g061470 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g061470
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	major latex allergen Hev b 5-like
Location	Csor_Chr03: 5714817 .. 5715508 (+)
RNA-Seq Expression	Csor.00g061470
Synteny	Csor.00g061470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACCATTGAGGTAATTTCAAGCTTTTATAGCTTTCTCTCATGGCTTTAAGATCTTTTTTCTTGTTTTTCTTTTGGTATTCTAACAATGGCTGTATGAGTGTGATCATGTTGTTACTGATTTAATGATCTGTGGGGTATTGGATCACATTCTCATATGAATATGATCATTGAAGGCTGTTTGAACATATTGTGTTTGAATGGAAATCCATAATGAATTGTGCGATCTGGGTGTGGCAGGTTGAATCAGCCCCCGTTGTATTGGCAGAGCCTGAGGCAGCTCCAGTGGTCCAAGCTGAGGAGAAAGTTGCAGAGGAGGCAGTGAGTGAAGCAGCCCCTGCAGAAGAGGCAAAGGAGGAGGAAGCTGCCTCTGAAGCTGTTGAGACAGAGGAACCAGCACCGGTCGCAGCCGAACCCGAGGTCGAAACCAAGGAAGTTGTGGTAGAGGAGGCAGTGGAGGCAGAGCCTGCAGCTGCTGCTGCTTCCGAGCCCGAAGCAGCGGCCGAGGCGGAAGAGAAGAAGGAAGAGACCAAAGAGGAAACAGAAGAGCCAGTGGTAGAGAAAAAAGAAGAAGAAGAAGAACCTCAGGAAGTGAAGGCTGAAGAGACTGTTGAAGAGAGCTCAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCACCAGCTGAGGAAGAGAAGCCAAAGGAAGAGGAATAA

mRNA sequence

ATGGCCACCATTGAGGTTGAATCAGCCCCCGTTGTATTGGCAGAGCCTGAGGCAGCTCCAGTGGTCCAAGCTGAGGAGAAAGTTGCAGAGGAGGCAGTGAGTGAAGCAGCCCCTGCAGAAGAGGCAAAGGAGGAGGAAGCTGCCTCTGAAGCTGTTGAGACAGAGGAACCAGCACCGGTCGCAGCCGAACCCGAGGTCGAAACCAAGGAAGTTGTGGTAGAGGAGGCAGTGGAGGCAGAGCCTGCAGCTGCTGCTGCTTCCGAGCCCGAAGCAGCGGCCGAGGCGGAAGAGAAGAAGGAAGAGACCAAAGAGGAAACAGAAGAGCCAGTGGTAGAGAAAAAAGAAGAAGAAGAAGAACCTCAGGAAGTGAAGGCTGAAGAGACTGTTGAAGAGAGCTCAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCACCAGCTGAGGAAGAGAAGCCAAAGGAAGAGGAATAA

Coding sequence (CDS)

ATGGCCACCATTGAGGTTGAATCAGCCCCCGTTGTATTGGCAGAGCCTGAGGCAGCTCCAGTGGTCCAAGCTGAGGAGAAAGTTGCAGAGGAGGCAGTGAGTGAAGCAGCCCCTGCAGAAGAGGCAAAGGAGGAGGAAGCTGCCTCTGAAGCTGTTGAGACAGAGGAACCAGCACCGGTCGCAGCCGAACCCGAGGTCGAAACCAAGGAAGTTGTGGTAGAGGAGGCAGTGGAGGCAGAGCCTGCAGCTGCTGCTGCTTCCGAGCCCGAAGCAGCGGCCGAGGCGGAAGAGAAGAAGGAAGAGACCAAAGAGGAAACAGAAGAGCCAGTGGTAGAGAAAAAAGAAGAAGAAGAAGAACCTCAGGAAGTGAAGGCTGAAGAGACTGTTGAAGAGAGCTCAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCACCAGCTGAGGAAGAGAAGCCAAAGGAAGAGGAATAA

Protein sequence

MATIEVESAPVVLAEPEAAPVVQAEEKVAEEAVSEAAPAEEAKEEEAASEAVETEEPAPVAAEPEVETKEVVVEEAVEAEPAAAAASEPEAAAEAEEKKEETKEETEEPVVEKKEEEEEPQEVKAEETVEESSEAAAAAAAAAPAEEEKPKEEE

Homology

[Close]

BLAST of Csor.00g061470 vs. NCBI nr
Match: KAG6603817.1 (hypothetical protein SDJN03_04426, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033998.1 hypothetical protein SDJN02_03724 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 217 bits (552), Expect = 1.46e-69
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MATIEVESAPVVLAEPEAAPVVQAEEKVAEEAVSEAAPAEEAKEEEAASEAVETEEPAPV 60
           MATIEVESAPVVLAEPEAAPVVQAEEKVAEEAVSEAAPAEEAKEEEAASEAVETEEPAPV
Sbjct: 1   MATIEVESAPVVLAEPEAAPVVQAEEKVAEEAVSEAAPAEEAKEEEAASEAVETEEPAPV 60

Query: 61  AAEPEVETKEVVVEEAVEAEPAAAAASEPEAAAEAEEKKEETKEETEEPVVEKKEEEEEP 120
           AAEPEVETKEVVVEEAVEAEPAAAAASEPEAAAEAEEKKEETKEETEEPVVEKKEEEEEP
Sbjct: 61  AAEPEVETKEVVVEEAVEAEPAAAAASEPEAAAEAEEKKEETKEETEEPVVEKKEEEEEP 120

Query: 121 QEVKAEETVEESSEAAAAAAAAAPAEEEKPKEEE 154
           QEVKAEETVEESSEAAAAAAAAAPAEEEKPKEEE
Sbjct: 121 QEVKAEETVEESSEAAAAAAAAAPAEEEKPKEEE 154

[Close]

BLAST of Csor.00g061470 vs. NCBI nr
Match: XP_022950569.1 (major latex allergen Hev b 5-like [Cucurbita moschata])

HSP 1 Score: 212 bits (540), Expect = 1.01e-67
Identity = 154/155 (99.35%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MATIEVESAPVVLAEPEAAPVVQAEEKVAEEAVSEAAPAEEAKEEEAASEAVETEEPAPV 60
           MATIEVESAPVVLAEPEAAPVVQAEEKVAEEAVSEAAPAEEAKEEEAASEAVETEEPAPV
Sbjct: 1   MATIEVESAPVVLAEPEAAPVVQAEEKVAEEAVSEAAPAEEAKEEEAASEAVETEEPAPV 60

Query: 61  AAEPEVETKEVVVEEAVEAEPAAAAASEPEAAAEAEEKKEETKEETEEPVVEKKEEEEEP 120
           AAEPEVETKEVVVEEAVEAEPAAAAASEPEAAAEAEEKKEETKEETEEPVVEKKEEEEEP
Sbjct: 61  AAEPEVETKEVVVEEAVEAEPAAAAASEPEAAAEAEEKKEETKEETEEPVVEKKEEEEEP 120

Query: 121 QEVKAEETVEESSEAAAAAAAAA-PAEEEKPKEEE 154
           QEVKAEETVEESSEAAAAAAAAA PAEEEKPKEEE
Sbjct: 121 QEVKAEETVEESSEAAAAAAAAAAPAEEEKPKEEE 155

[Close]

BLAST of Csor.00g061470 vs. NCBI nr
Match: XP_023544677.1 (uncharacterized protein LOC111804190 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023544678.1 uncharacterized protein LOC111804190 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 187 bits (476), Expect = 6.11e-58
Identity = 146/159 (91.82%), Postives = 147/159 (92.45%), Query Frame = 0


Query: 1   MATIEVESAPVVLAEPEAAPVVQAEEKVAEEAVSEAAPAEEAKEEEAASEAVETEEPAPV 60
           MATIEVESAPVVLAEPEAAPVVQAEEKV EE VSEAAPAEE KEEEAASEAVETEEPAPV
Sbjct: 1   MATIEVESAPVVLAEPEAAPVVQAEEKVVEEPVSEAAPAEEPKEEEAASEAVETEEPAPV 60

Query: 61  AAEPEVETKEVVVEEA---VEAEPAA--AAASEPEAAAEAEEKKEETKEETEEPVVEKKE 120
           AAEPEVETKEVVVEEA   VEAEPAA  AAASEPEA A AEEKKEETKEETEEPVVEKKE
Sbjct: 61  AAEPEVETKEVVVEEAAEAVEAEPAAPAAAASEPEAPAGAEEKKEETKEETEEPVVEKKE 120

Query: 121 EEEEPQEVKAEETVEESSEAAAAAAAAAPAEEEKPKEEE 154
           EEEEPQEVKAE+TVEESSEAAAAAA A PAEEEKPKEEE
Sbjct: 121 EEEEPQEVKAEDTVEESSEAAAAAAPA-PAEEEKPKEEE 158

[Close]

BLAST of Csor.00g061470 vs. NCBI nr
Match: XP_022979119.1 (major latex allergen Hev b 5-like [Cucurbita maxima])

HSP 1 Score: 181 bits (460), Expect = 1.46e-55
Identity = 144/160 (90.00%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 1   MATIEVESAPVVLAEPEAAPVVQAEEKVAEEAVSEAAPAEEAKEEEAASEAVETEEPAPV 60
           MATIEVESAPVVL EPEAAPVVQAEEKVAEEAVSEAAPAEE KEEEAASEAVETEEPAPV
Sbjct: 1   MATIEVESAPVVLPEPEAAPVVQAEEKVAEEAVSEAAPAEEPKEEEAASEAVETEEPAPV 60

Query: 61  AAEPEVETKEVVVEEA---VEAEPAAAAA---SEPEAAAEAEEKKEETKEETEEPVVEKK 120
           A EPEVETKEVVVEEA   VEAEPAAAAA   SEPEAAAEAEEKKEETKEETEEPVVEKK
Sbjct: 61  ATEPEVETKEVVVEEAAEAVEAEPAAAAAAAASEPEAAAEAEEKKEETKEETEEPVVEKK 120

Query: 121 EEEEEPQEVKAEETVEESSEAAAAAAAAAPAEEEKPKEEE 154
           EEE EPQEVKAEETVEESSE AAA     PAEEEKPKEEE
Sbjct: 121 EEE-EPQEVKAEETVEESSEEAAA-----PAEEEKPKEEE 154

[Close]

BLAST of Csor.00g061470 vs. NCBI nr
Match: XP_038880819.1 (probable serine/threonine-protein kinase kinX [Benincasa hispida])

HSP 1 Score: 120 bits (302), Expect = 1.01e-31
Identity = 112/156 (71.79%), Postives = 121/156 (77.56%), Query Frame = 0


Query: 1   MATIEVESAPVVLAEPEAAPVVQAEEKVAEEAVSEAAPAEEAKEEEAASEAVETEEPAPV 60
           MATIEVESAPVVL EPEAAPVVQ EEKV EE V+EA PAEE KEE AA EAV+ EEPAPV
Sbjct: 1   MATIEVESAPVVLPEPEAAPVVQTEEKVVEEPVAEA-PAEEPKEE-AAPEAVKAEEPAPV 60

Query: 61  AAEPEVETKEVVVEEAV--EAEPAAAAASEPEAAAEAEEKKEETKEETEEPVVEKKEEEE 120
           A EP+VETKEVV EE    EAEPA  A SEPEA  EAEEK+EE KEET    VE+K EEE
Sbjct: 61  ATEPDVETKEVVEEETKPEEAEPAVGA-SEPEAPVEAEEKEEEAKEET----VEEKTEEE 120

Query: 121 EPQEVKAEETVEESSEAAAAAAAAAPAEEEKPKEEE 154
           +PQEVK+E+ VEE S     + AAAPAEEEKPK EE
Sbjct: 121 KPQEVKSEDVVEEES-----SEAAAPAEEEKPKAEE 144

[Close]

BLAST of Csor.00g061470 vs. ExPASy TrEMBL
Match: A0A6J1GG70 (major latex allergen Hev b 5-like OS=Cucurbita moschata OX=3662 GN=LOC111453630 PE=4 SV=1)

HSP 1 Score: 212 bits (540), Expect = 4.89e-68
Identity = 154/155 (99.35%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MATIEVESAPVVLAEPEAAPVVQAEEKVAEEAVSEAAPAEEAKEEEAASEAVETEEPAPV 60
           MATIEVESAPVVLAEPEAAPVVQAEEKVAEEAVSEAAPAEEAKEEEAASEAVETEEPAPV
Sbjct: 1   MATIEVESAPVVLAEPEAAPVVQAEEKVAEEAVSEAAPAEEAKEEEAASEAVETEEPAPV 60

Query: 61  AAEPEVETKEVVVEEAVEAEPAAAAASEPEAAAEAEEKKEETKEETEEPVVEKKEEEEEP 120
           AAEPEVETKEVVVEEAVEAEPAAAAASEPEAAAEAEEKKEETKEETEEPVVEKKEEEEEP
Sbjct: 61  AAEPEVETKEVVVEEAVEAEPAAAAASEPEAAAEAEEKKEETKEETEEPVVEKKEEEEEP 120

Query: 121 QEVKAEETVEESSEAAAAAAAAA-PAEEEKPKEEE 154
           QEVKAEETVEESSEAAAAAAAAA PAEEEKPKEEE
Sbjct: 121 QEVKAEETVEESSEAAAAAAAAAAPAEEEKPKEEE 155

[Close]

BLAST of Csor.00g061470 vs. ExPASy TrEMBL
Match: A0A6J1IVT4 (major latex allergen Hev b 5-like OS=Cucurbita maxima OX=3661 GN=LOC111478851 PE=4 SV=1)

HSP 1 Score: 181 bits (460), Expect = 7.06e-56
Identity = 144/160 (90.00%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 1   MATIEVESAPVVLAEPEAAPVVQAEEKVAEEAVSEAAPAEEAKEEEAASEAVETEEPAPV 60
           MATIEVESAPVVL EPEAAPVVQAEEKVAEEAVSEAAPAEE KEEEAASEAVETEEPAPV
Sbjct: 1   MATIEVESAPVVLPEPEAAPVVQAEEKVAEEAVSEAAPAEEPKEEEAASEAVETEEPAPV 60

Query: 61  AAEPEVETKEVVVEEA---VEAEPAAAAA---SEPEAAAEAEEKKEETKEETEEPVVEKK 120
           A EPEVETKEVVVEEA   VEAEPAAAAA   SEPEAAAEAEEKKEETKEETEEPVVEKK
Sbjct: 61  ATEPEVETKEVVVEEAAEAVEAEPAAAAAAAASEPEAAAEAEEKKEETKEETEEPVVEKK 120

Query: 121 EEEEEPQEVKAEETVEESSEAAAAAAAAAPAEEEKPKEEE 154
           EEE EPQEVKAEETVEESSE AAA     PAEEEKPKEEE
Sbjct: 121 EEE-EPQEVKAEETVEESSEEAAA-----PAEEEKPKEEE 154

[Close]

BLAST of Csor.00g061470 vs. ExPASy TrEMBL
Match: A0A5D3CMF4 (Fibrous sheath CABYR-binding protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005990 PE=4 SV=1)

HSP 1 Score: 105 bits (262), Expect = 6.02e-26
Identity = 102/156 (65.38%), Postives = 110/156 (70.51%), Query Frame = 0


Query: 1   MATIEVESAPVVLAEPEAAPVVQAEEKVAEEAVSEAAPAEEAKEEEAASEAVETEEPAPV 60
           MATIEVESAPVVL EPEAAP VQ EEKV EE V+E  PA+E KEE A     E E+PAPV
Sbjct: 1   MATIEVESAPVVLPEPEAAPAVQPEEKVVEEPVAEETPAQEQKEEAAPEPVEEVEKPAPV 60

Query: 61  AAEPEVETKEVVVEEAVEAEPAAAAASEPEAAAEAE--EKKEETKEETEEPVVEKKEEEE 120
             EP VETKE VVEE       A  A+EPEA AEAE  +K+EETKEET E V EK EE  
Sbjct: 61  ETEPVVETKEDVVEEKESKPEEAEPAAEPEAPAEAEAEKKEEETKEETVEAVEEKAEE-- 120

Query: 121 EPQEVKAEETVEESSEAAAAAAAAAPAEEEKPKEEE 154
           E +EVK+EE VEESSEAAA      PAEEEKPK EE
Sbjct: 121 EAKEVKSEEVVEESSEAAA------PAEEEKPKAEE 148

[Close]

BLAST of Csor.00g061470 vs. ExPASy TrEMBL
Match: A0A0A0KMX7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511710 PE=4 SV=1)

HSP 1 Score: 104 bits (259), Expect = 1.71e-25
Identity = 101/156 (64.74%), Postives = 111/156 (71.15%), Query Frame = 0


Query: 1   MATIEVESAPVVLAEPEAAPVVQAEEKVAEEAVSEAAPAEEAKEEEAASEAVETEEPAPV 60
           MAT+EVES PVVL EPEAAP VQ EEKV EE V+E  PA+E +EE AA  A E  E APV
Sbjct: 1   MATVEVESVPVVLPEPEAAPAVQPEEKVVEEPVAEETPAQEQEEEAAAPAAPEPVEEAPV 60

Query: 61  AAEPEVETKEVVVEEAVEAEPAAAAASEPEAAAEAE--EKKEETKEETEEPVVEKKEEEE 120
           A EPEVETKE VVEE       A  A+EPEA AEAE  +K+EETKEET E V EK EE  
Sbjct: 61  ATEPEVETKEEVVEEKESKPEEAEPAAEPEAPAEAEAEKKEEETKEETVEAVEEKTEE-- 120

Query: 121 EPQEVKAEETVEESSEAAAAAAAAAPAEEEKPKEEE 154
           E +EVK+E+ VEESSEAAA      PAEEEKPK EE
Sbjct: 121 ETKEVKSEDAVEESSEAAA------PAEEEKPKAEE 148

[Close]

BLAST of Csor.00g061470 vs. ExPASy TrEMBL
Match: A0A1S3B0W0 (fibrous sheath CABYR-binding protein-like OS=Cucumis melo OX=3656 GN=LOC103484659 PE=4 SV=1)

HSP 1 Score: 102 bits (253), Expect = 1.26e-24
Identity = 101/156 (64.74%), Postives = 109/156 (69.87%), Query Frame = 0


Query: 1   MATIEVESAPVVLAEPEAAPVVQAEEKVAEEAVSEAAPAEEAKEEEAASEAVETEEPAPV 60
           MATIEVESAPVVL EPEAAP VQ EEKV EE V+E  PA+E KEE A     E E+PAPV
Sbjct: 1   MATIEVESAPVVLPEPEAAPAVQPEEKVVEEPVAEETPAQEQKEEAAPEPVEEVEKPAPV 60

Query: 61  AAEPEVETKEVVVEEAVEAEPAAAAASEPEAAAEAE--EKKEETKEETEEPVVEKKEEEE 120
             EP VETKE VVEE       A  A+EPEA AEAE  EK+EETKEE     VE+K EE 
Sbjct: 61  ETEPVVETKEEVVEEKESKPEEAEPAAEPEAPAEAEAEEKEEETKEEA----VEEKAEE- 120

Query: 121 EPQEVKAEETVEESSEAAAAAAAAAPAEEEKPKEEE 154
           E +EVK+EE VEESSEAAA      PAEEEKPK EE
Sbjct: 121 EAKEVKSEEVVEESSEAAA------PAEEEKPKAEE 145

The following BLAST results are available for this feature:

BLAST of Csor.00g061470 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g061470 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6603817.1	1.46e-69	100.00	hypothetical protein SDJN03_04426, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022950569.1	1.01e-67	99.35	major latex allergen Hev b 5-like [Cucurbita moschata]	[more]
XP_023544677.1	6.11e-58	91.82	uncharacterized protein LOC111804190 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022979119.1	1.46e-55	90.00	major latex allergen Hev b 5-like [Cucurbita maxima]	[more]
XP_038880819.1	1.01e-31	71.79	probable serine/threonine-protein kinase kinX [Benincasa hispida]	[more]

BLAST of Csor.00g061470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GG70	4.89e-68	99.35	major latex allergen Hev b 5-like OS=Cucurbita moschata OX=3662 GN=LOC111453630 ...	[more]
A0A6J1IVT4	7.06e-56	90.00	major latex allergen Hev b 5-like OS=Cucurbita maxima OX=3661 GN=LOC111478851 PE...	[more]
A0A5D3CMF4	6.02e-26	65.38	Fibrous sheath CABYR-binding protein-like OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A0A0KMX7	1.71e-25	64.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511710 PE=4 SV=1	[more]
A0A1S3B0W0	1.26e-24	64.74	fibrous sheath CABYR-binding protein-like OS=Cucumis melo OX=3656 GN=LOC10348465...	[more]

BLAST of Csor.00g061470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..45

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g061470.m01	Csor.00g061470.m01	mRNA