Csor.00g061420 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGTTGACGGTCTTCCTTTCTAAGGAACTCCTCCGTCATGGGTGGTCTCATATTCCATCGCCTTGTGTAGCAGCCTCGCTGCCATTACCACCTGGGACATGCCATGAGACGTACATTTCAATTTCTTCAATGCCTTGTTTTGACAATTTTATTGATGTTGTGTTATTTGCTGTGTTTATGTGACGGGGGATTTATGATCCAATCCCTTACTAAATTTGGAGCGAACACGTTATGTTCGTATAGTGCCAAAGTTAACGTCACAGAGTAATTCCGGTTGATGTTGATGGCTCCTTTGGAGCCTCCATCGGCTGCTGGTCTCATATTCCATTGCCTTGTGGAGCAGCGTTGCTGCCTTTACTTCTTGGGACTGGCCATGAGACCTATATTCTTAGTTAA ATGACGTTGACGGTCTTCCTTTCTAAGGAACTCCTCCGTCATGGGTGGTCTCATATTCCATCGCCTTGTGTAGCAGCCTCGCTGCCATTACCACCTGGGACATGCCATGAGACAGTAATTCCGGTTGATGTTGATGGCTCCTTTGGAGCCTCCATCGGCTGCTGGTCTCATATTCCATTGCCTTGTGGAGCAGCGTTGCTGCCTTTACTTCTTGGGACTGGCCATGAGACCTATATTCTTAGTTAA ATGACGTTGACGGTCTTCCTTTCTAAGGAACTCCTCCGTCATGGGTGGTCTCATATTCCATCGCCTTGTGTAGCAGCCTCGCTGCCATTACCACCTGGGACATGCCATGAGACAGTAATTCCGGTTGATGTTGATGGCTCCTTTGGAGCCTCCATCGGCTGCTGGTCTCATATTCCATTGCCTTGTGGAGCAGCGTTGCTGCCTTTACTTCTTGGGACTGGCCATGAGACCTATATTCTTAGTTAA MTLTVFLSKELLRHGWSHIPSPCVAASLPLPPGTCHETVIPVDVDGSFGASIGCWSHIPLPCGAALLPLLLGTGHETYILS Homology
BLAST of Csor.00g061420 vs. NCBI nr
Match: KAG6603822.1 (hypothetical protein SDJN03_04431, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 176 bits (446), Expect = 1.05e-55 Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0
BLAST of Csor.00g061420 vs. NCBI nr
Match: KGN49921.1 (hypothetical protein Csa_000564 [Cucumis sativus]) HSP 1 Score: 55.1 bits (131), Expect = 3.54e-07 Identity = 28/49 (57.14%), Postives = 33/49 (67.35%), Query Frame = 0
BLAST of Csor.00g061420 vs. NCBI nr
Match: XP_023640402.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111831102 [Capsella rubella]) HSP 1 Score: 53.1 bits (126), Expect = 5.92e-07 Identity = 29/46 (63.04%), Postives = 31/46 (67.39%), Query Frame = 0
BLAST of Csor.00g061420 vs. NCBI nr
Match: KAG7643231.1 (hypothetical protein ISN44_As02g030670 [Arabidopsis suecica]) HSP 1 Score: 49.7 bits (117), Expect = 7.82e-06 Identity = 25/44 (56.82%), Postives = 29/44 (65.91%), Query Frame = 0
BLAST of Csor.00g061420 vs. NCBI nr
Match: NP_181118.1 (transmembrane protein [Arabidopsis thaliana] >AAD15440.1 unknown protein [Arabidopsis thaliana] >AEC09156.1 transmembrane protein [Arabidopsis thaliana] >KAG7638618.1 hypothetical protein ISN45_At02g030420 [Arabidopsis thaliana x Arabidopsis arenosa] >OAP11093.1 hypothetical protein AXX17_AT2G32400 [Arabidopsis thaliana]) HSP 1 Score: 49.7 bits (117), Expect = 8.57e-06 Identity = 25/44 (56.82%), Postives = 29/44 (65.91%), Query Frame = 0
BLAST of Csor.00g061420 vs. ExPASy TrEMBL
Match: A0A0A0KQD9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G140470 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.71e-07 Identity = 28/49 (57.14%), Postives = 33/49 (67.35%), Query Frame = 0
BLAST of Csor.00g061420 vs. ExPASy TrEMBL
Match: Q9ZQP7 (Transmembrane protein OS=Arabidopsis thaliana OX=3702 GN=At2g35750 PE=4 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 4.15e-06 Identity = 25/44 (56.82%), Postives = 29/44 (65.91%), Query Frame = 0
BLAST of Csor.00g061420 vs. ExPASy TrEMBL
Match: A0A178W193 (Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=AXX17_At2g32400 PE=4 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 4.15e-06 Identity = 25/44 (56.82%), Postives = 29/44 (65.91%), Query Frame = 0
BLAST of Csor.00g061420 vs. ExPASy TrEMBL
Match: A0A654F9U1 (Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=AN1_LOCUS10026 PE=4 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 4.87e-06 Identity = 25/44 (56.82%), Postives = 29/44 (65.91%), Query Frame = 0
BLAST of Csor.00g061420 vs. ExPASy TrEMBL
Match: A0A067GPY0 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g039463mg PE=4 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 1.11e-05 Identity = 27/52 (51.92%), Postives = 30/52 (57.69%), Query Frame = 0
BLAST of Csor.00g061420 vs. TAIR 10
Match: AT2G35750.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 50.1 bits (118), Expect = 1.0e-06 Identity = 25/44 (56.82%), Postives = 29/44 (65.91%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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