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Csor.00g060560 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTCTCCGCTGCTTCTCCTCTTACTCTTCCGCCTCTACCGGCCAGATCCTCTCCACGGGAGTTTACACGTGTCAGATTCCGACCACCGCAGGCTTTCTCCTCCACTGCCACCGCCTCTTCCACTGCCTACGCCTCCAGAGAGGACACCGCCTCGCCGTATCTCAACCTTCAAAGAATGGCGTCCTGTACATCTCTCTACGAGGTCCTTGGGATCCCTACTGGAGCTTCTTTTCAGGAGATCAAATCGGCATACCGACGTCTTGCCAGAGTTTGCCATCCGGATGTAGTGGCCGTCGACCGGAAAGACTCATCGGCCACCGATTTCATGAAGATCCATGCCGCTTATTCCACTTTGTCTGATCCTGAGAAACGCGCCGATTACGATCGGAAGCATCTCCGCCGTTATCGTCCTGTGGCTTCGGTGCGGATGGCTTCCGGTTTCACTGGCTACACTCGTCGTAATTGGGAGACGGATCAGTGCTGGTAA ATGCTCTCCGCTGCTTCTCCTCTTACTCTTCCGCCTCTACCGGCCAGATCCTCTCCACGGGAGTTTACACGTGTCAGATTCCGACCACCGCAGGCTTTCTCCTCCACTGCCACCGCCTCTTCCACTGCCTACGCCTCCAGAGAGGACACCGCCTCGCCGTATCTCAACCTTCAAAGAATGGCGTCCTGTACATCTCTCTACGAGGTCCTTGGGATCCCTACTGGAGCTTCTTTTCAGGAGATCAAATCGGCATACCGACGTCTTGCCAGAGTTTGCCATCCGGATGTAGTGGCCGTCGACCGGAAAGACTCATCGGCCACCGATTTCATGAAGATCCATGCCGCTTATTCCACTTTGTCTGATCCTGAGAAACGCGCCGATTACGATCGGAAGCATCTCCGCCGTTATCGTCCTGTGGCTTCGGTGCGGATGGCTTCCGGTTTCACTGGCTACACTCGTCGTAATTGGGAGACGGATCAGTGCTGGTAA ATGCTCTCCGCTGCTTCTCCTCTTACTCTTCCGCCTCTACCGGCCAGATCCTCTCCACGGGAGTTTACACGTGTCAGATTCCGACCACCGCAGGCTTTCTCCTCCACTGCCACCGCCTCTTCCACTGCCTACGCCTCCAGAGAGGACACCGCCTCGCCGTATCTCAACCTTCAAAGAATGGCGTCCTGTACATCTCTCTACGAGGTCCTTGGGATCCCTACTGGAGCTTCTTTTCAGGAGATCAAATCGGCATACCGACGTCTTGCCAGAGTTTGCCATCCGGATGTAGTGGCCGTCGACCGGAAAGACTCATCGGCCACCGATTTCATGAAGATCCATGCCGCTTATTCCACTTTGTCTGATCCTGAGAAACGCGCCGATTACGATCGGAAGCATCTCCGCCGTTATCGTCCTGTGGCTTCGGTGCGGATGGCTTCCGGTTTCACTGGCTACACTCGTCGTAATTGGGAGACGGATCAGTGCTGGTAA MLSAASPLTLPPLPARSSPREFTRVRFRPPQAFSSTATASSTAYASREDTASPYLNLQRMASCTSLYEVLGIPTGASFQEIKSAYRRLARVCHPDVVAVDRKDSSATDFMKIHAAYSTLSDPEKRADYDRKHLRRYRPVASVRMASGFTGYTRRNWETDQCW Homology
BLAST of Csor.00g060560 vs. ExPASy Swiss-Prot
Match: Q9FYB5 (Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ11 PE=1 SV=2) HSP 1 Score: 132.5 bits (332), Expect = 4.3e-30 Identity = 77/154 (50.00%), Postives = 95/154 (61.69%), Query Frame = 0
BLAST of Csor.00g060560 vs. ExPASy Swiss-Prot
Match: B9MJZ0 (Chaperone protein DnaJ OS=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) OX=521460 GN=dnaJ PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.3e-10 Identity = 38/91 (41.76%), Postives = 51/91 (56.04%), Query Frame = 0
BLAST of Csor.00g060560 vs. ExPASy Swiss-Prot
Match: Q5WHG0 (Chaperone protein DnaJ OS=Bacillus clausii (strain KSM-K16) OX=66692 GN=dnaJ PE=3 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.7e-10 Identity = 31/64 (48.44%), Postives = 45/64 (70.31%), Query Frame = 0
BLAST of Csor.00g060560 vs. ExPASy Swiss-Prot
Match: B5YAR4 (Chaperone protein DnaJ OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) OX=309799 GN=dnaJ PE=3 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.7e-10 Identity = 35/65 (53.85%), Postives = 44/65 (67.69%), Query Frame = 0
BLAST of Csor.00g060560 vs. ExPASy Swiss-Prot
Match: A4XKA5 (Chaperone protein DnaJ OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 / Tp8T 6331) OX=351627 GN=dnaJ PE=3 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.2e-10 Identity = 39/94 (41.49%), Postives = 51/94 (54.26%), Query Frame = 0
BLAST of Csor.00g060560 vs. NCBI nr
Match: KAG6603908.1 (Chaperone protein dnaJ 11, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034090.1 Chaperone protein dnaJ 11, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 319 bits (818), Expect = 7.57e-110 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of Csor.00g060560 vs. NCBI nr
Match: XP_022978856.1 (chaperone protein dnaJ 11, chloroplastic [Cucurbita maxima]) HSP 1 Score: 319 bits (817), Expect = 1.08e-109 Identity = 161/162 (99.38%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of Csor.00g060560 vs. NCBI nr
Match: XP_023543054.1 (chaperone protein dnaJ 11, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 318 bits (814), Expect = 3.08e-109 Identity = 161/162 (99.38%), Postives = 161/162 (99.38%), Query Frame = 0
BLAST of Csor.00g060560 vs. NCBI nr
Match: XP_022950872.1 (chaperone protein dnaJ 11, chloroplastic [Cucurbita moschata]) HSP 1 Score: 313 bits (802), Expect = 2.01e-107 Identity = 161/162 (99.38%), Postives = 161/162 (99.38%), Query Frame = 0
BLAST of Csor.00g060560 vs. NCBI nr
Match: XP_038883841.1 (chaperone protein dnaJ 11, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 307 bits (787), Expect = 4.04e-105 Identity = 156/162 (96.30%), Postives = 159/162 (98.15%), Query Frame = 0
BLAST of Csor.00g060560 vs. ExPASy TrEMBL
Match: A0A6J1IP70 (chaperone protein dnaJ 11, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111478685 PE=4 SV=1) HSP 1 Score: 319 bits (817), Expect = 5.21e-110 Identity = 161/162 (99.38%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of Csor.00g060560 vs. ExPASy TrEMBL
Match: A0A6J1GG35 (chaperone protein dnaJ 11, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111453840 PE=4 SV=1) HSP 1 Score: 313 bits (802), Expect = 9.75e-108 Identity = 161/162 (99.38%), Postives = 161/162 (99.38%), Query Frame = 0
BLAST of Csor.00g060560 vs. ExPASy TrEMBL
Match: A0A5A7SKL2 (Chaperone protein dnaJ 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001260 PE=4 SV=1) HSP 1 Score: 296 bits (759), Expect = 3.64e-101 Identity = 150/162 (92.59%), Postives = 154/162 (95.06%), Query Frame = 0
BLAST of Csor.00g060560 vs. ExPASy TrEMBL
Match: A0A1S3B225 (chaperone protein dnaJ 11, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485131 PE=4 SV=1) HSP 1 Score: 296 bits (759), Expect = 3.64e-101 Identity = 150/162 (92.59%), Postives = 154/162 (95.06%), Query Frame = 0
BLAST of Csor.00g060560 vs. ExPASy TrEMBL
Match: A0A6J1BWA9 (chaperone protein dnaJ 11, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111005309 PE=4 SV=1) HSP 1 Score: 291 bits (745), Expect = 5.31e-99 Identity = 149/164 (90.85%), Postives = 156/164 (95.12%), Query Frame = 0
BLAST of Csor.00g060560 vs. TAIR 10
Match: AT2G17880.1 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 137.1 bits (344), Expect = 1.2e-32 Identity = 81/165 (49.09%), Postives = 99/165 (60.00%), Query Frame = 0
BLAST of Csor.00g060560 vs. TAIR 10
Match: AT4G36040.1 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 132.5 bits (332), Expect = 3.1e-31 Identity = 77/154 (50.00%), Postives = 95/154 (61.69%), Query Frame = 0
BLAST of Csor.00g060560 vs. TAIR 10
Match: AT3G13310.1 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 83.6 bits (205), Expect = 1.6e-16 Identity = 62/159 (38.99%), Postives = 79/159 (49.69%), Query Frame = 0
BLAST of Csor.00g060560 vs. TAIR 10
Match: AT1G80030.1 (Molecular chaperone Hsp40/DnaJ family protein ) HSP 1 Score: 63.9 bits (154), Expect = 1.3e-10 Identity = 42/97 (43.30%), Postives = 58/97 (59.79%), Query Frame = 0
BLAST of Csor.00g060560 vs. TAIR 10
Match: AT1G80030.3 (Molecular chaperone Hsp40/DnaJ family protein ) HSP 1 Score: 63.9 bits (154), Expect = 1.3e-10 Identity = 42/97 (43.30%), Postives = 58/97 (59.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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