Csor.00g060490 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g060490
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	protein WUSCHEL-like
Location	Csor_Chr03: 6183786 .. 6184873 (-)
RNA-Seq Expression	Csor.00g060490
Synteny	Csor.00g060490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCCCAAACAGGGCAACGAGGAAGGCAGCAATGGGAGAGGCCAAGGGGGGTTCTTGTGCAGGCAAAGCAGCACGCGGTGGACTCCCACAACCGACCAAATTAGAATCTTGAAGGAGCTTTATTACAACAATGGCGTTCGGTCCCCAAGCGCTGATCAAATTCAGAGAATCTCTGCTAGGCTTAGACAGTACGGTAAAATTGAAGGCAAGAACGTTTTTTATTGGTTTCAGAACCATAAGGCTCGTGAGAGGCAGAAAAAAAGGTTCACTTCTGGTTCTGATCATCATTTTTCTAAACAACAACACCCTTCGCTGATTCCTTCCACTCTTTGGAAGCCTCAAGATTCCTCGTCCTCGTTCCACAACAGATACCGACCCAGTAACGAATACGTCTCTATTGGTACGAGGTGTTTGAAAAATCTCAAAGCAAAGCCACTAAAGCTTATGCTCAAAATGAACCATATTATACTATTGTAGAGAGTCGTGATTCCTAACAAGGTTATGTGTTCGTTATGTGTGTGCAGCTCCGTCTTCTCCGGTTATGGTTGCCGTGGGGCATATGGGAAATTACGGATATGGGTCTTCCACTTTTGACAACAGTTTCAGAGTAAGCTCTTTTAGGATTCATTATGATTTAACGAAAAAAAAGTGAACTTTTTTGTCTATTTGGGTGAGAATTTCTGATTCTGCTGCTGCAGGAGTGCTCGATATTGTCGGGAGGAAGTAGCAGCGTAGTTGGGTCTCGAAGCCACAACATGGGATCATGGATCGGCGTCGATCGGCGTTCTTCCCCAGCGGCGGTGGCGGCGGCGGCTGATATATTTGAAAAGACAAAATATGTTGAAGAATACATGGAAGACGAGGAGGAGGAGGAGGAACAAGAAATCGAAACTCTCCCCCTCTTCCCCATCCATGGTGGTGATCGGAATCTTAGTGGATTATGCAGCATGCGACAGGAATATTCCGACAGCTTCTACACCACCACTTGGTATGGCAGCTCGGATGACGGCGCCGCCGGTTCTAGAACTTCGCTGGAGCTCAGCCTAAACTCTTATGCCACTATCTCACCGGATGATGGAATGTGA

mRNA sequence

ATGGAGCCCAAACAGGGCAACGAGGAAGGCAGCAATGGGAGAGGCCAAGGGGGGTTCTTGTGCAGGCAAAGCAGCACGCGGTGGACTCCCACAACCGACCAAATTAGAATCTTGAAGGAGCTTTATTACAACAATGGCGTTCGGTCCCCAAGCGCTGATCAAATTCAGAGAATCTCTGCTAGGCTTAGACAGTACGCTCCGTCTTCTCCGGTTATGGTTGCCGTGGGGCATATGGGAAATTACGGATATGGGTCTTCCACTTTTGACAACAGTTTCAGAGAGTGCTCGATATTGTCGGGAGGAAGTAGCAGCGTAGTTGGGTCTCGAAGCCACAACATGGGATCATGGATCGGCGTCGATCGGCGTTCTTCCCCAGCGGCGGTGGCGGCGGCGGCTGATATATTTGAAAAGACAAAATATGTTGAAGAATACATGGAAGACGAGGAGGAGGAGGAGGAACAAGAAATCGAAACTCTCCCCCTCTTCCCCATCCATGGTGGTGATCGGAATCTTAGTGGATTATGCAGCATGCGACAGGAATATTCCGACAGCTTCTACACCACCACTTGGTATGGCAGCTCGGATGACGGCGCCGCCGGTTCTAGAACTTCGCTGGAGCTCAGCCTAAACTCTTATGCCACTATCTCACCGGATGATGGAATGTGA

Coding sequence (CDS)

ATGGAGCCCAAACAGGGCAACGAGGAAGGCAGCAATGGGAGAGGCCAAGGGGGGTTCTTGTGCAGGCAAAGCAGCACGCGGTGGACTCCCACAACCGACCAAATTAGAATCTTGAAGGAGCTTTATTACAACAATGGCGTTCGGTCCCCAAGCGCTGATCAAATTCAGAGAATCTCTGCTAGGCTTAGACAGTACGCTCCGTCTTCTCCGGTTATGGTTGCCGTGGGGCATATGGGAAATTACGGATATGGGTCTTCCACTTTTGACAACAGTTTCAGAGAGTGCTCGATATTGTCGGGAGGAAGTAGCAGCGTAGTTGGGTCTCGAAGCCACAACATGGGATCATGGATCGGCGTCGATCGGCGTTCTTCCCCAGCGGCGGTGGCGGCGGCGGCTGATATATTTGAAAAGACAAAATATGTTGAAGAATACATGGAAGACGAGGAGGAGGAGGAGGAACAAGAAATCGAAACTCTCCCCCTCTTCCCCATCCATGGTGGTGATCGGAATCTTAGTGGATTATGCAGCATGCGACAGGAATATTCCGACAGCTTCTACACCACCACTTGGTATGGCAGCTCGGATGACGGCGCCGCCGGTTCTAGAACTTCGCTGGAGCTCAGCCTAAACTCTTATGCCACTATCTCACCGGATGATGGAATGTGA

Protein sequence

MEPKQGNEEGSNGRGQGGFLCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQYAPSSPVMVAVGHMGNYGYGSSTFDNSFRECSILSGGSSSVVGSRSHNMGSWIGVDRRSSPAAVAAAADIFEKTKYVEEYMEDEEEEEEQEIETLPLFPIHGGDRNLSGLCSMRQEYSDSFYTTTWYGSSDDGAAGSRTSLELSLNSYATISPDDGM

Homology

[Close]

BLAST of Csor.00g060490 vs. ExPASy Swiss-Prot
Match: Q8LL11 (Protein WUSCHEL OS=Petunia hybrida OX=4102 GN=WUS PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 5.9e-38
Identity = 108/285 (37.89%), Postives = 142/285 (49.82%), Query Frame = 0


Query: 8   EEGSNGRGQGGFLCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQY-- 67
           E+GSN      F+CRQ+STRWTPTTDQIRILK+LYYNNGVRSP+A+QIQRISA+LRQY  
Sbjct: 28  EDGSNKNNSSNFMCRQNSTRWTPTTDQIRILKDLYYNNGVRSPTAEQIQRISAKLRQYGK 87

Query: 68  ------------------------------------------------------------ 127
                                                                       
Sbjct: 88  IEGKNVFYWFQNHKARERQKKRLIAAATTDNTNLPMQMQFQRGVWRSSADDPIHHKYTNP 147

Query: 128 -----APSSPVMVAVGHMGNYGYGSSTFDNSFRECSILSGGSSSVVGSRSHNMGSWIGVD 187
                + SS  ++AVG  GN+GYG+   + SFR+CSI  G S S      H   +W GVD
Sbjct: 148 GVHCPSASSHGVLAVGQNGNHGYGALAMEKSFRDCSISPGSSMS---HHHHQNFAWAGVD 207

Query: 188 RRSSPAAVAAAADIFEKTKYVE-EYMEDEEEEEEQE------------IETLPLFPIHGG 213
               P +        EKTK+ E E +E +EE++E++            IETLPLFP+H  
Sbjct: 208 ----PYSSTTTYPFLEKTKHFENETLEADEEQQEEDQENYYYQRTTSAIETLPLFPMH-- 267

[Close]

BLAST of Csor.00g060490 vs. ExPASy Swiss-Prot
Match: Q6YBV1 (Protein WUSCHEL OS=Antirrhinum majus OX=4151 GN=WUS PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 9.1e-31
Identity = 108/290 (37.24%), Postives = 138/290 (47.59%), Query Frame = 0


Query: 2   EPKQGNEEG--------SNGRGQGGFLCRQSSTRWTPTTDQIRILKELYYNNGVRSPSAD 61
           + +QGNE+         +NG G   FLCRQSSTRWTPTTDQIRILK+LYYNNGVRSP+A+
Sbjct: 7   QQQQGNEQQDSQGIGKINNGSGGSSFLCRQSSTRWTPTTDQIRILKDLYYNNGVRSPTAE 66

Query: 62  QIQRISARLRQYA----------------------------------------------- 121
           QIQRISA+LRQY                                                
Sbjct: 67  QIQRISAKLRQYGKIEGKNVFYWFQNHKARERQKKRFTADHHHHMNVPTIHNHHYKPPPV 126

Query: 122 ------------PSSP------VMVAVGHMGNYGYGSSTFDNSFRECSILSGGSSSVVGS 181
                       PSS       +     H+GNYGYGS   + SFREC+I S   ++V GS
Sbjct: 127 YNKFSNMNSGSFPSSSNGSPGFLTTPGSHVGNYGYGSVAMEKSFRECTISSTTDANVGGS 186

Query: 182 RSHNMGSWIGVDRRSSPAAVAAAADIFEKTKYVEEY---MEDEEEEEEQ---EIETLPLF 213
            S N+ +WIG++               +  KY+  Y   +E EEE EE    EIETLPLF
Sbjct: 187 MSQNI-AWIGINNEYHNPYT-----FIDTRKYMNGYDQTLEIEEEAEENYTAEIETLPLF 246

[Close]

BLAST of Csor.00g060490 vs. ExPASy Swiss-Prot
Match: Q84VT7 (Protein WUSCHEL OS=Solanum lycopersicum OX=4081 GN=WUS PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 8.5e-29
Identity = 98/284 (34.51%), Postives = 130/284 (45.77%), Query Frame = 0


Query: 5   QGNEEGSNGRGQGGFLCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ 64
           Q N E         FLCRQSS+RWTPT+DQIRILK+LYYNNGVRSP+A+QIQRISA+LRQ
Sbjct: 4   QHNIEDGGKNSNNSFLCRQSSSRWTPTSDQIRILKDLYYNNGVRSPTAEQIQRISAKLRQ 63

Query: 65  Y----------------------------------------------------------- 124
           Y                                                           
Sbjct: 64  YGKIEGKNVFYWFQNHKARERQKKRLIAAASATDNNNISSMQMIPHLWRSPDDHHKYNTA 123

Query: 125 ---------APSSPVMVAVGHMGNYGYGSSTFDNSFRECSILSGGSSSVVGSRSHNMGSW 184
                    +PSS  ++ V   GNYGYG+   + SFRECSI      S  G   H   +W
Sbjct: 124 TTNPGVQCPSPSSHGVLPVVQTGNYGYGTLAMEKSFRECSI------SPPGGSYHQNLTW 183

Query: 185 IGVDRRSSPAAVAAAADIF---EKTKYVEEYMEDEEEEEEQE-----IETLPLFPIHGGD 213
           +GVD  ++ +  + A   F      K+ EE +++E+EEE  +     +ETL LFP+H  +
Sbjct: 184 VGVDPYNNMSTTSPATYPFLEKSNNKHYEETLDEEQEEENYQRGNSALETLSLFPMH-EE 243

[Close]

BLAST of Csor.00g060490 vs. ExPASy Swiss-Prot
Match: Q9SB92 (Protein WUSCHEL OS=Arabidopsis thaliana OX=3702 GN=WUS PE=1 SV=2)

HSP 1 Score: 92.4 bits (228), Expect = 6.7e-18
Identity = 40/62 (64.52%), Postives = 52/62 (83.87%), Query Frame = 0


Query: 4  KQGNEEGSNGRGQGGFLCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLR 63
          ++     +N  G GG+ CRQ+STRWTPTT+QI+ILKELYYNN +RSP+ADQIQ+I+ARLR
Sbjct: 15 QESGNNNNNKSGSGGYTCRQTSTRWTPTTEQIKILKELYYNNAIRSPTADQIQKITARLR 74

Query: 64 QY 66
          Q+
Sbjct: 75 QF 76

[Close]

BLAST of Csor.00g060490 vs. ExPASy Swiss-Prot
Match: Q7XM13 (WUSCHEL-related homeobox 1 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX1 PE=1 SV=3)

HSP 1 Score: 78.2 bits (191), Expect = 1.3e-13
Identity = 39/70 (55.71%), Postives = 53/70 (75.71%), Query Frame = 0


Query: 1  MEPKQGNEEGSNG----RGQGGF-LCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQI 60
          M+ +Q  + G  G     G+GG  +CR S TRWTPTT+QI+IL+ELYY+ G+RSP+++QI
Sbjct: 4  MQQQQRQQVGGGGGEEVAGRGGVPVCRPSGTRWTPTTEQIKILRELYYSCGIRSPNSEQI 63

Query: 61 QRISARLRQY 66
          QRI+A LRQY
Sbjct: 64 QRIAAMLRQY 73

[Close]

BLAST of Csor.00g060490 vs. NCBI nr
Match: KAG6603915.1 (Protein WUSCHEL, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 438 bits (1127), Expect = 5.20e-155
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MEPKQGNEEGSNGRGQGGFLCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISA 60
           MEPKQGNEEGSNGRGQGGFLCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISA
Sbjct: 1   MEPKQGNEEGSNGRGQGGFLCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISA 60

Query: 61  RLRQYAPSSPVMVAVGHMGNYGYGSSTFDNSFRECSILSGGSSSVVGSRSHNMGSWIGVD 120
           RLRQYAPSSPVMVAVGHMGNYGYGSSTFDNSFRECSILSGGSSSVVGSRSHNMGSWIGVD
Sbjct: 61  RLRQYAPSSPVMVAVGHMGNYGYGSSTFDNSFRECSILSGGSSSVVGSRSHNMGSWIGVD 120

Query: 121 RRSSPAAVAAAADIFEKTKYVEEYMEDEEEEEEQEIETLPLFPIHGGDRNLSGLCSMRQE 180
           RRSSPAAVAAAADIFEKTKYVEEYMEDEEEEEEQEIETLPLFPIHGGDRNLSGLCSMRQE
Sbjct: 121 RRSSPAAVAAAADIFEKTKYVEEYMEDEEEEEEQEIETLPLFPIHGGDRNLSGLCSMRQE 180

Query: 181 YSDSFYTTTWYGSSDDGAAGSRTSLELSLNSYATISPDDGM 221
           YSDSFYTTTWYGSSDDGAAGSRTSLELSLNSYATISPDDGM
Sbjct: 181 YSDSFYTTTWYGSSDDGAAGSRTSLELSLNSYATISPDDGM 221

[Close]

BLAST of Csor.00g060490 vs. NCBI nr
Match: KAG7034096.1 (Protein WUSCHEL, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 407 bits (1047), Expect = 9.60e-142
Identity = 221/290 (76.21%), Postives = 221/290 (76.21%), Query Frame = 0


Query: 1   MEPKQGNEEGSNGRGQGGFLCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISA 60
           MEPKQGNEEGSNGRGQGGFLCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISA
Sbjct: 1   MEPKQGNEEGSNGRGQGGFLCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISA 60

Query: 61  RLRQY------------------------------------------------------- 120
           RLRQY                                                       
Sbjct: 61  RLRQYGKIEGKNVFYWFQNHKARERQKKRFTSGSDHHFSKQQHPSLIPSTLWKPQDSSSS 120

Query: 121 --------------APSSPVMVAVGHMGNYGYGSSTFDNSFRECSILSGGSSSVVGSRSH 180
                         APSSPVMVAVGHMGNYGYGSSTFDNSFRECSILSGGSSSVVGSRSH
Sbjct: 121 FHNRYRPSNEYVSIAPSSPVMVAVGHMGNYGYGSSTFDNSFRECSILSGGSSSVVGSRSH 180

Query: 181 NMGSWIGVDRRSSPAAVAAAADIFEKTKYVEEYMEDEEEEEEQEIETLPLFPIHGGDRNL 221
           NMGSWIGVDRRSSPAAVAAAADIFEKTKYVEEYMEDEEEEEEQEIETLPLFPIHGGDRNL
Sbjct: 181 NMGSWIGVDRRSSPAAVAAAADIFEKTKYVEEYMEDEEEEEEQEIETLPLFPIHGGDRNL 240

[Close]

BLAST of Csor.00g060490 vs. NCBI nr
Match: XP_022950352.1 (protein WUSCHEL-like [Cucurbita moschata])

HSP 1 Score: 384 bits (986), Expect = 1.74e-132
Identity = 213/293 (72.70%), Postives = 214/293 (73.04%), Query Frame = 0


Query: 1   MEPKQGNEEGSNGRGQGGFLCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISA 60
           MEPKQGNEEGSNGRGQGGFLCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISA
Sbjct: 1   MEPKQGNEEGSNGRGQGGFLCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISA 60

Query: 61  RLRQY------------------------------------------------------- 120
           RLRQY                                                       
Sbjct: 61  RLRQYGKIEGKNVFYWFQNHKARERQKKRFTSGSDHHFSKQQQQHPSLIPSTLWKPQDSS 120

Query: 121 ----------------APSSPVMVAVGHMGNYGYGSSTFDNSFRECSILSGGSSSVVGSR 180
                           APSSPVMVAVGHMGNYGYGSSTFDNSFRECSILSGGSSSVVGSR
Sbjct: 121 SSFHNRYRPSNEYVSIAPSSPVMVAVGHMGNYGYGSSTFDNSFRECSILSGGSSSVVGSR 180

Query: 181 SHNMGSWIGVDRRSSPAAVAAAADIFEKTKYVEEYMEDEEEEEE-QEIETLPLFPIHGGD 221
           SHNMGSW+GVDRRSSPA      DIFEKTKYVEEYMEDEEEEEE QEIETLPLFPIHGGD
Sbjct: 181 SHNMGSWMGVDRRSSPAT-----DIFEKTKYVEEYMEDEEEEEEEQEIETLPLFPIHGGD 240

[Close]

BLAST of Csor.00g060490 vs. NCBI nr
Match: XP_023544001.1 (protein WUSCHEL-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 379 bits (973), Expect = 1.54e-130
Identity = 210/293 (71.67%), Postives = 212/293 (72.35%), Query Frame = 0


Query: 1   MEPKQGNEEGSNGRGQGGFLCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISA 60
           MEPKQGNEEGSNG+GQ GFLCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISA
Sbjct: 1   MEPKQGNEEGSNGKGQAGFLCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISA 60

Query: 61  RLRQY------------------------------------------------------- 120
           RLRQY                                                       
Sbjct: 61  RLRQYGKIEGKNVFYWFQNHKARERQKKRFTSGSDHHLSKQQQQQHPSLIPSTLWKPQDS 120

Query: 121 -----------------APSSPVMVAVGHMGNYGYGSSTFDNSFRECSILSGGSSSVVGS 180
                            APSSPVMVAVGHMGNYGYGSSTFDNSFRECSILSGGSSSV+GS
Sbjct: 121 SSSFHNRYRPSKEYVSIAPSSPVMVAVGHMGNYGYGSSTFDNSFRECSILSGGSSSVIGS 180

Query: 181 RSHNMGSWIGVDRRSSPAAVAAAADIFEKTKYVEEYMEDEEEEEEQEIETLPLFPIHGGD 221
           RSHNMGSWIGVDRRSSPAA     DIFEKTKYVEEYMEDEEEE  QEIETLPLFPIHGGD
Sbjct: 181 RSHNMGSWIGVDRRSSPAA-----DIFEKTKYVEEYMEDEEEE--QEIETLPLFPIHGGD 240

[Close]

BLAST of Csor.00g060490 vs. NCBI nr
Match: KAE8647606.1 (hypothetical protein Csa_003874 [Cucumis sativus])

HSP 1 Score: 345 bits (885), Expect = 6.02e-118
Identity = 180/220 (81.82%), Postives = 192/220 (87.27%), Query Frame = 0


Query: 5   QGNEEGSNGRGQGGFLCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ 64
           QG E G    G+GGFLCRQSS+RWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ
Sbjct: 17  QGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ 76

Query: 65  YAPSSPVMVAVGHMGNYGYGSSTFDNSFRECSILSGGSSSVVGSRSHNMGSWIGVDRRSS 124
           YAPSS VMVAVGHMGNYGYGS+TF+NSFRECSI SGG+SSVVG RSHNMGSWIG+D  SS
Sbjct: 77  YAPSSSVMVAVGHMGNYGYGSATFENSFRECSISSGGNSSVVGYRSHNMGSWIGIDPYSS 136

Query: 125 PAAVAA--AADIFEKTKYVEEYMEDEEEEEEQEIETLPLFPIHGGDRNLSGLCSMRQEYS 184
           PAA AA  +A++FEKTKYVEE MED EE   QEIETLPLFPIHG   NL G CSM+ EYS
Sbjct: 137 PAAAAAGGSANVFEKTKYVEESMEDHEE---QEIETLPLFPIHGDRNNLGGFCSMKPEYS 196

Query: 185 DSFYTTTWYGSSDD-GAAGSRTSLELSLNSYATISPDDGM 221
           +S+YTTTWYG SDD GAAGSR SLELSLNSYATISPDDGM
Sbjct: 197 ESYYTTTWYGRSDDNGAAGSRASLELSLNSYATISPDDGM 233

[Close]

BLAST of Csor.00g060490 vs. ExPASy TrEMBL
Match: A0A6J1GEJ9 (protein WUSCHEL-like OS=Cucurbita moschata OX=3662 GN=LOC111453464 PE=3 SV=1)

HSP 1 Score: 384 bits (986), Expect = 8.41e-133
Identity = 213/293 (72.70%), Postives = 214/293 (73.04%), Query Frame = 0


Query: 1   MEPKQGNEEGSNGRGQGGFLCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISA 60
           MEPKQGNEEGSNGRGQGGFLCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISA
Sbjct: 1   MEPKQGNEEGSNGRGQGGFLCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISA 60

Query: 61  RLRQY------------------------------------------------------- 120
           RLRQY                                                       
Sbjct: 61  RLRQYGKIEGKNVFYWFQNHKARERQKKRFTSGSDHHFSKQQQQHPSLIPSTLWKPQDSS 120

Query: 121 ----------------APSSPVMVAVGHMGNYGYGSSTFDNSFRECSILSGGSSSVVGSR 180
                           APSSPVMVAVGHMGNYGYGSSTFDNSFRECSILSGGSSSVVGSR
Sbjct: 121 SSFHNRYRPSNEYVSIAPSSPVMVAVGHMGNYGYGSSTFDNSFRECSILSGGSSSVVGSR 180

Query: 181 SHNMGSWIGVDRRSSPAAVAAAADIFEKTKYVEEYMEDEEEEEE-QEIETLPLFPIHGGD 221
           SHNMGSW+GVDRRSSPA      DIFEKTKYVEEYMEDEEEEEE QEIETLPLFPIHGGD
Sbjct: 181 SHNMGSWMGVDRRSSPAT-----DIFEKTKYVEEYMEDEEEEEEEQEIETLPLFPIHGGD 240

[Close]

BLAST of Csor.00g060490 vs. ExPASy TrEMBL
Match: A0A1S4DTA3 (protein WUSCHEL OS=Cucumis melo OX=3656 GN=LOC103485357 PE=4 SV=1)

HSP 1 Score: 345 bits (885), Expect = 3.13e-118
Identity = 176/217 (81.11%), Postives = 189/217 (87.10%), Query Frame = 0


Query: 5   QGNEEGSNGRGQGGFLCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ 64
           QG E G    G+ GFLCRQSS+RWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ
Sbjct: 21  QGGEGGGGSNGKSGFLCRQSSSRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ 80

Query: 65  YAPSSPVMVAVGHMGNYGYGSSTFDNSFRECSILSGGSSSVVGSRSHNMGSWIGVDRRSS 124
           YAPSS VMVAVGHMGNYGYGS+TF+NSFRECSI SGG+SSVVG RSHNMGSWIG+D  SS
Sbjct: 81  YAPSSSVMVAVGHMGNYGYGSATFENSFRECSISSGGNSSVVGYRSHNMGSWIGIDPYSS 140

Query: 125 PAAVAAAADIFEKTKYVEEYMEDEEEEEEQEIETLPLFPIHGGDRNLSGLCSMRQEYSDS 184
            AA  +A ++FEKTKYVEE MED+ EE  QEIETLPLFPIHG   NL G CSM+ EYS+S
Sbjct: 141 AAAGGSANNVFEKTKYVEESMEDDHEE--QEIETLPLFPIHGDRNNLGGFCSMKPEYSES 200

Query: 185 FYTTTWYGSSDDGAAGSRTSLELSLNSYATISPDDGM 221
           +YTTTWYG SDDGAAGSR SLELSLNSYATISPDDGM
Sbjct: 201 YYTTTWYGRSDDGAAGSRASLELSLNSYATISPDDGM 235

[Close]

BLAST of Csor.00g060490 vs. ExPASy TrEMBL
Match: A0A5A7SHQ2 (Protein WUSCHEL OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001370 PE=3 SV=1)

HSP 1 Score: 314 bits (805), Expect = 4.75e-105
Identity = 176/286 (61.54%), Postives = 189/286 (66.08%), Query Frame = 0


Query: 5   QGNEEGSNGRGQGGFLCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ 64
           QG E G    G+ GFLCRQSS+RWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ
Sbjct: 20  QGGEGGGGSNGKSGFLCRQSSSRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ 79

Query: 65  Y----------------------------------------------------------- 124
           Y                                                           
Sbjct: 80  YGKIEGKNVFYWFQNHKARERQKKRFTSNSNSPITTTTTTTDHFKISSTNNNINWKSEDH 139

Query: 125 ----------APSSPVMVAVGHMGNYGYGSSTFDNSFRECSILSGGSSSVVGSRSHNMGS 184
                     APSS VMVAVGHMGNYGYGS+TF+NSFRECSI SGG+SSVVG RSHNMGS
Sbjct: 140 SSSSHNKFPPAPSSSVMVAVGHMGNYGYGSATFENSFRECSISSGGNSSVVGYRSHNMGS 199

Query: 185 WIGVDRRSSPAAVAAAADIFEKTKYVEEYMEDEEEEEEQEIETLPLFPIHGGDRNLSGLC 221
           WIG+D  SS AA  +A ++FEKTKYVEE MED+ EE  QEIETLPLFPIHG   NL G C
Sbjct: 200 WIGIDPYSSAAAGGSANNVFEKTKYVEESMEDDHEE--QEIETLPLFPIHGDRNNLGGFC 259

[Close]

BLAST of Csor.00g060490 vs. ExPASy TrEMBL
Match: A0A0A0KH83 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G505860 PE=3 SV=1)

HSP 1 Score: 313 bits (803), Expect = 9.89e-105
Identity = 180/291 (61.86%), Postives = 192/291 (65.98%), Query Frame = 0


Query: 5   QGNEEGSNGRGQGGFLCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ 64
           QG E G    G+GGFLCRQSS+RWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ
Sbjct: 17  QGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ 76

Query: 65  Y----------------------------------------------------------- 124
           Y                                                           
Sbjct: 77  YGKIEGKNVFYWFQNHKARERQKKRFTSNSTSPITTSNTTTTTTDFKISSTNNNINWKSE 136

Query: 125 ------------APSSPVMVAVGHMGNYGYGSSTFDNSFRECSILSGGSSSVVGSRSHNM 184
                       APSS VMVAVGHMGNYGYGS+TF+NSFRECSI SGG+SSVVG RSHNM
Sbjct: 137 DHSSSSHNKFPPAPSSSVMVAVGHMGNYGYGSATFENSFRECSISSGGNSSVVGYRSHNM 196

Query: 185 GSWIGVDRRSSPAAVAA--AADIFEKTKYVEEYMEDEEEEEEQEIETLPLFPIHGGDRNL 221
           GSWIG+D  SSPAA AA  +A++FEKTKYVEE MED EE   QEIETLPLFPIHG   NL
Sbjct: 197 GSWIGIDPYSSPAAAAAGGSANVFEKTKYVEESMEDHEE---QEIETLPLFPIHGDRNNL 256

[Close]

BLAST of Csor.00g060490 vs. ExPASy TrEMBL
Match: A0A6J1KQL8 (protein WUSCHEL OS=Cucurbita maxima OX=3661 GN=LOC111497366 PE=3 SV=1)

HSP 1 Score: 303 bits (775), Expect = 1.15e-100
Identity = 179/292 (61.30%), Postives = 192/292 (65.75%), Query Frame = 0


Query: 5   QGNEEGSNGRGQGGFLCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ 64
           QGNEEGSNG+G  GF+CRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ
Sbjct: 9   QGNEEGSNGKG--GFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ 68

Query: 65  YA---------------------------------------------------------- 124
           Y                                                           
Sbjct: 69  YGKIEGKNVFYWFQNHKARERQKKRFTSSASDHHHHHQQIPVPKQQQQQQLQSSLVSSKP 128

Query: 125 ----------------PSSPVMVAVGHMGNYGYGSSTFDNSFRECSILSGGSSSVVGSR- 184
                           PSS VMVAVGHMGNYGYGS+TF+NSFRECSI SGGSSS+VGSR 
Sbjct: 129 EDSSSSPLFHTKCPPTPSSSVMVAVGHMGNYGYGSTTFENSFRECSISSGGSSSMVGSRR 188

Query: 185 SHNMGSWIGVDRRSSPAAVAAAADIFEKTKYVEEYMEDEEEEEEQEIETLPLFPIHGGDR 221
           SH+MGSWIGVD  SSPA+  AAA +FEKTKYVEE ME    EEEQEIETLPLFPIH  DR
Sbjct: 189 SHHMGSWIGVDPYSSPAS--AAATVFEKTKYVEESME----EEEQEIETLPLFPIHD-DR 248

[Close]

BLAST of Csor.00g060490 vs. TAIR 10
Match: AT2G17950.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 92.4 bits (228), Expect = 4.8e-19
Identity = 40/62 (64.52%), Postives = 52/62 (83.87%), Query Frame = 0


Query: 4  KQGNEEGSNGRGQGGFLCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLR 63
          ++     +N  G GG+ CRQ+STRWTPTT+QI+ILKELYYNN +RSP+ADQIQ+I+ARLR
Sbjct: 15 QESGNNNNNKSGSGGYTCRQTSTRWTPTTEQIKILKELYYNNAIRSPTADQIQKITARLR 74

Query: 64 QY 66
          Q+
Sbjct: 75 QF 76

[Close]

BLAST of Csor.00g060490 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 )

HSP 1 Score: 55.8 bits (133), Expect = 5.0e-08
Identity = 25/41 (60.98%), Postives = 34/41 (82.93%), Query Frame = 0


Query: 25  STRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQY 66
           S+RW PT DQ+R+L+EL Y  G R+PSAD IQ+I+A+LR+Y
Sbjct: 74  SSRWNPTPDQLRVLEEL-YRQGTRTPSADHIQQITAQLRRY 113

[Close]

BLAST of Csor.00g060490 vs. TAIR 10
Match: AT5G59340.1 (WUSCHEL related homeobox 2 )

HSP 1 Score: 55.8 bits (133), Expect = 5.0e-08
Identity = 26/42 (61.90%), Postives = 33/42 (78.57%), Query Frame = 0


Query: 24 SSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQY 66
          SS+RW PT DQI +L+ L Y  G+R+PSADQIQ+I+ RLR Y
Sbjct: 11 SSSRWNPTKDQITLLENL-YKEGIRTPSADQIQQITGRLRAY 51

[Close]

BLAST of Csor.00g060490 vs. TAIR 10
Match: AT2G28610.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 47.8 bits (112), Expect = 1.4e-05
Identity = 22/42 (52.38%), Postives = 33/42 (78.57%), Query Frame = 0


Query: 24 SSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQY 66
          +STRW PT +Q+ IL+E+ Y +G+R+P+A QIQ+I+A L  Y
Sbjct: 5  ASTRWCPTPEQLMILEEM-YRSGIRTPNAVQIQQITAHLAFY 45

[Close]

BLAST of Csor.00g060490 vs. TAIR 10
Match: AT2G01500.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 47.0 bits (110), Expect = 2.3e-05
Identity = 20/42 (47.62%), Postives = 33/42 (78.57%), Query Frame = 0


Query: 24 SSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQY 66
          ++ RW PT +QI  L+EL Y +G R+P+ +QIQ+I+++LR+Y
Sbjct: 58 ATLRWNPTPEQITTLEEL-YRSGTRTPTTEQIQQIASKLRKY 98

The following BLAST results are available for this feature:

BLAST of Csor.00g060490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LL11	5.9e-38	37.89	Protein WUSCHEL OS=Petunia hybrida OX=4102 GN=WUS PE=2 SV=1	[more]
Q6YBV1	9.1e-31	37.24	Protein WUSCHEL OS=Antirrhinum majus OX=4151 GN=WUS PE=2 SV=1	[more]
Q84VT7	8.5e-29	34.51	Protein WUSCHEL OS=Solanum lycopersicum OX=4081 GN=WUS PE=2 SV=1	[more]
Q9SB92	6.7e-18	64.52	Protein WUSCHEL OS=Arabidopsis thaliana OX=3702 GN=WUS PE=1 SV=2	[more]
Q7XM13	1.3e-13	55.71	WUSCHEL-related homeobox 1 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX1 PE=1...	[more]

BLAST of Csor.00g060490 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6603915.1	5.20e-155	100.00	Protein WUSCHEL, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7034096.1	9.60e-142	76.21	Protein WUSCHEL, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022950352.1	1.74e-132	72.70	protein WUSCHEL-like [Cucurbita moschata]	[more]
XP_023544001.1	1.54e-130	71.67	protein WUSCHEL-like [Cucurbita pepo subsp. pepo]	[more]
KAE8647606.1	6.02e-118	81.82	hypothetical protein Csa_003874 [Cucumis sativus]	[more]

BLAST of Csor.00g060490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GEJ9	8.41e-133	72.70	protein WUSCHEL-like OS=Cucurbita moschata OX=3662 GN=LOC111453464 PE=3 SV=1	[more]
A0A1S4DTA3	3.13e-118	81.11	protein WUSCHEL OS=Cucumis melo OX=3656 GN=LOC103485357 PE=4 SV=1	[more]
A0A5A7SHQ2	4.75e-105	61.54	Protein WUSCHEL OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G0013...	[more]
A0A0A0KH83	9.89e-105	61.86	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G505860 PE...	[more]
A0A6J1KQL8	1.15e-100	61.30	protein WUSCHEL OS=Cucurbita maxima OX=3661 GN=LOC111497366 PE=3 SV=1	[more]

BLAST of Csor.00g060490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17950.1	4.8e-19	64.52	Homeodomain-like superfamily protein	[more]
AT3G18010.1	5.0e-08	60.98	WUSCHEL related homeobox 1	[more]
AT5G59340.1	5.0e-08	61.90	WUSCHEL related homeobox 2	[more]
AT2G28610.1	1.4e-05	52.38	Homeodomain-like superfamily protein	[more]
AT2G01500.1	2.3e-05	47.62	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 26..62 e-value: 2.0E-6 score: 27.5
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 26..62 e-value: 0.008833 score: 31.8301
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..25
None	No IPR available	PANTHER	PTHR45940:SF2	PROTEIN WUSCHEL	coord: 1..65 coord: 68..214
IPR044555	Protein WUSCHEL-like	PANTHER	PTHR45940	WUSCHEL-RELATED HOMEOBOX 1-RELATED	coord: 1..65 coord: 68..214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g060490.m01	Csor.00g060490.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0099402	plant organ development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity