Csor.00g060330 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g060330
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	protein SHI RELATED SEQUENCE 1-like
Location	Csor_Chr03: 6244990 .. 6246237 (+)
RNA-Seq Expression	Csor.00g060330
Synteny	Csor.00g060330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGGCTTCTTCAGTTTAGGTGGAGGAGGAAGAGAAGACCACCAAGAGCATCAAGAGCATCAAGACCACCAAGAGCACCAACAAAACAACGACACAAACCCGGAGACCTTGTTTTGGTACAAGGGCAACGTGGAGCTATGGCAACAACAACACCACCACCACCACCAGCACCCTCAACAAGAACAGCCTCTCTTCCAAACCCAATCCCGGACTCCTTACTCCGCCGCTCTACCCGTTCGAACGTCCGATGAGTCCTCCTCCAGATCGGGCAATTTCATGATGATTGGGTCAGGATCCGGGGGAGGAGGAATCAGCTGCCAAGACTGTGGCAACCAAGCTAAAAAAGACTGTGTCCATATGCGGTGCAGGACTTGCTGCAAGAGCCGAGGATTCCATTGCGAAACCCATGTGAAAAGCACTTGGGTCCCTGCAGCCAAGCGCCGCGAACGCCAAGAGAAACTCGCCGCCTTACAAACCCAGCATCAACTTCACCTTCATGGCGACAATAATCCCAAACGCCACAGAGATTATAACCCCACATCCTCCTCTTCTCTCGCCTGCACTCTCATCCCCAACAACACTTCTGGTACAAATACAAATACAAATACAAATACAATCATCCCTTCCCCCACTTTTATTTATTTATTTTTTTTAAATTTAATTATATAATTTTAGATTGCGTGCTGCAGATGTCAAAACTTCCCCTCGCTATAGTAAACCCCATCACCTTTTTTTCTGTCTTCTTTACTTACTGTTATGCAGTATTCCTGACGAGTTCATCCTCTGTGTTTAATCCCTAATCTTCCATTTTTTTTTTCTAACTAAAATATTGTATTTAATTTTTTAGGGTTAGAAATTGGGAATTTCCCGGCGGAGTTGAACTCACCAGCAGTATTCCGTTGCGTTCGTGTGAGCTCCACCGACGAATCCGACGATCAATACGCGTATCAAACGGCGGTCAATATCGGAGGACATGTTTTCAAGGGAATTCTATACGATCAAGGACCCGAAACTAATTACATTCCACCAGCTGAGACCTCGTCCGGTGGTGGTGGTGGTGGTGGTGGTGGTGGGAGTAGTAGTGGAGTGCAACCATTGAATTTCATCACCGGCGCAACGGATGCGACCACCGCAAGCGGTGGTTCCTCCGCTGCATTACCCTTACTCGATCCCTCCTCCTTATATTCAACGCCGCTGAATAGCTTCATGGCGGGTACGCAATTCTTCCTACCACCAAGATCTTAA

mRNA sequence

ATGTCTGGCTTCTTCAGTTTAGGTGGAGGAGGAAGAGAAGACCACCAAGAGCATCAAGAGCATCAAGACCACCAAGAGCACCAACAAAACAACGACACAAACCCGGAGACCTTGTTTTGGTACAAGGGCAACGTGGAGCTATGGCAACAACAACACCACCACCACCACCAGCACCCTCAACAAGAACAGCCTCTCTTCCAAACCCAATCCCGGACTCCTTACTCCGCCGCTCTACCCGTTCGAACGTCCGATGAGTCCTCCTCCAGATCGGGCAATTTCATGATGATTGGGTCAGGATCCGGGGGAGGAGGAATCAGCTGCCAAGACTGTGGCAACCAAGCTAAAAAAGACTGTGTCCATATGCGGTGCAGGACTTGCTGCAAGAGCCGAGGATTCCATTGCGAAACCCATGTGAAAAGCACTTGGGTCCCTGCAGCCAAGCGCCGCGAACGCCAAGAGAAACTCGCCGCCTTACAAACCCAGCATCAACTTCACCTTCATGGCGACAATAATCCCAAACGCCACAGAGATTATAACCCCACATCCTCCTCTTCTCTCGCCTGCACTCTCATCCCCAACAACACTTCTGGGTTAGAAATTGGGAATTTCCCGGCGGAGTTGAACTCACCAGCAGTATTCCGTTGCGTTCGTGTGAGCTCCACCGACGAATCCGACGATCAATACGCGTATCAAACGGCGGTCAATATCGGAGGACATGTTTTCAAGGGAATTCTATACGATCAAGGACCCGAAACTAATTACATTCCACCAGCTGAGACCTCGTCCGGTGGTGGTGGTGGTGGTGGTGGTGGTGGGAGTAGTAGTGGAGTGCAACCATTGAATTTCATCACCGGCGCAACGGATGCGACCACCGCAAGCGGTGGTTCCTCCGCTGCATTACCCTTACTCGATCCCTCCTCCTTATATTCAACGCCGCTGAATAGCTTCATGGCGGGTACGCAATTCTTCCTACCACCAAGATCTTAA

Coding sequence (CDS)

ATGTCTGGCTTCTTCAGTTTAGGTGGAGGAGGAAGAGAAGACCACCAAGAGCATCAAGAGCATCAAGACCACCAAGAGCACCAACAAAACAACGACACAAACCCGGAGACCTTGTTTTGGTACAAGGGCAACGTGGAGCTATGGCAACAACAACACCACCACCACCACCAGCACCCTCAACAAGAACAGCCTCTCTTCCAAACCCAATCCCGGACTCCTTACTCCGCCGCTCTACCCGTTCGAACGTCCGATGAGTCCTCCTCCAGATCGGGCAATTTCATGATGATTGGGTCAGGATCCGGGGGAGGAGGAATCAGCTGCCAAGACTGTGGCAACCAAGCTAAAAAAGACTGTGTCCATATGCGGTGCAGGACTTGCTGCAAGAGCCGAGGATTCCATTGCGAAACCCATGTGAAAAGCACTTGGGTCCCTGCAGCCAAGCGCCGCGAACGCCAAGAGAAACTCGCCGCCTTACAAACCCAGCATCAACTTCACCTTCATGGCGACAATAATCCCAAACGCCACAGAGATTATAACCCCACATCCTCCTCTTCTCTCGCCTGCACTCTCATCCCCAACAACACTTCTGGGTTAGAAATTGGGAATTTCCCGGCGGAGTTGAACTCACCAGCAGTATTCCGTTGCGTTCGTGTGAGCTCCACCGACGAATCCGACGATCAATACGCGTATCAAACGGCGGTCAATATCGGAGGACATGTTTTCAAGGGAATTCTATACGATCAAGGACCCGAAACTAATTACATTCCACCAGCTGAGACCTCGTCCGGTGGTGGTGGTGGTGGTGGTGGTGGTGGGAGTAGTAGTGGAGTGCAACCATTGAATTTCATCACCGGCGCAACGGATGCGACCACCGCAAGCGGTGGTTCCTCCGCTGCATTACCCTTACTCGATCCCTCCTCCTTATATTCAACGCCGCTGAATAGCTTCATGGCGGGTACGCAATTCTTCCTACCACCAAGATCTTAA

Protein sequence

MSGFFSLGGGGREDHQEHQEHQDHQEHQQNNDTNPETLFWYKGNVELWQQQHHHHHQHPQQEQPLFQTQSRTPYSAALPVRTSDESSSRSGNFMMIGSGSGGGGISCQDCGNQAKKDCVHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIPNNTSGLEIGNFPAELNSPAVFRCVRVSSTDESDDQYAYQTAVNIGGHVFKGILYDQGPETNYIPPAETSSGGGGGGGGGGSSSGVQPLNFITGATDATTASGGSSAALPLLDPSSLYSTPLNSFMAGTQFFLPPRS

Homology

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BLAST of Csor.00g060330 vs. ExPASy Swiss-Prot
Match: Q9SD40 (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2)

HSP 1 Score: 282.3 bits (721), Expect = 6.8e-75
Identity = 181/382 (47.38%), Postives = 227/382 (59.42%), Query Frame = 0


Query: 1   MSGFFSLGGGGREDHQEHQEHQDHQEHQQNNDTNPETLFWYK------------------ 60
           M+GFFSL GGG          +DH+ +        E   WY+                  
Sbjct: 1   MAGFFSLDGGGGGGGGGGNNQEDHRSNTNPPPPVSEAWLWYRNPNVNANANTNVNANAPS 60

Query: 61  ------GNVELW----QQQHHHHHQHPQQEQPLFQTQSRTPYSAA------LPVRTSDES 120
                 G +ELW    QQ+    HQ  QQ   L+ + +      +      +   TS   
Sbjct: 61  SSNAALGTLELWQNHNQQEIMFQHQQHQQRLDLYSSAAGLGVGPSNHNQFDISGETSTAG 120

Query: 121 SSRSGNFMMI---GSGSGGGGISCQDCGNQAKKDCVHMRCRTCCKSRGFHCETHVKSTWV 180
           + R+   MMI   GSG G GG+SCQDCGNQAKKDC HMRCRTCCKSRGF C THV+STWV
Sbjct: 121 AGRAAAMMMIRSGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWV 180

Query: 181 PAAKRRERQEKLAALQTQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIPNNTSGLEIGNF 240
           PAAKRRERQ++LA +Q Q QL   G++ PKRHR+  P +SSSL CT IP++ SGLE+GNF
Sbjct: 181 PAAKRRERQQQLATVQPQTQLP-RGESVPKRHRENLPATSSSLVCTRIPSH-SGLEVGNF 240

Query: 241 PAELNSPAVFRCVRVSSTDESDDQYAYQTAVNIGGHVFKGILYDQGPET------NYIPP 300
           PAE++S AVFRCVRVSS ++ ++++AYQTAV+IGGH+FKGILYD GP +      N +  
Sbjct: 241 PAEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSGGGGYNVVAA 300

Query: 301 AETSSGGGGGGGGGGSSSGVQPLNFIT-GATDATTAS------GG----SSAALPLLDPS 329
            E+SSGGG          G Q LN IT G+    TAS      GG    S+AA   +DP+
Sbjct: 301 GESSSGGG----------GAQQLNLITAGSVTVATASSSTPNLGGIGSSSAAAATYIDPA 360

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BLAST of Csor.00g060330 vs. ExPASy Swiss-Prot
Match: K4B6C9 (Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 3.7e-73
Identity = 175/360 (48.61%), Postives = 215/360 (59.72%), Query Frame = 0


Query: 1   MSGFFSLGGGGREDHQE------------------HQEHQDHQEHQQNNDTNPETLFWYK 60
           M+ FFSLGG   + HQE                    EH  H  +Q+  +T      W  
Sbjct: 1   MANFFSLGGNQEQQHQEISSSQALVPTESNNWFLYRNEHHHHHHNQEIPNTYKGFELWQS 60

Query: 61  GNVELWQQQHHHHHQHPQQEQPLFQTQSR---------TPYSAALPVRTSDESSSRSGNF 120
           GN    Q QH HH Q  Q   P++  Q            P  +   +   D  +SRSG  
Sbjct: 61  GNTP--QHQHQHHQQQQQFRHPIYPLQDLYSTDVGLGVGPSRSGFDISAGDHEASRSGFV 120

Query: 121 MMIGSGSGGGGISCQDCGNQAKKDCVHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQE 180
           MM    SGGGGISCQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWVPAAKRRERQ+
Sbjct: 121 MM---RSGGGGISCQDCGNQAKKDCQHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQ 180

Query: 181 KLAALQTQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIPNNTSGLEIGNFPAELNSPAVF 240
           +LAALQ Q Q H + +NN K  R     S+SSL  T +P+NT+GLE+G FP+++ + AVF
Sbjct: 181 QLAALQQQQQGHNNNNNNHKNKRQREDPSASSLVSTRLPSNTNGLEVGKFPSKVRTSAVF 240

Query: 241 RCVRVSSTDESDDQYAYQTAVNIGGHVFKGILYDQGPETNYIPPAETSSGGGGGGGGGGS 300
           +C+++SS ++ +DQ AYQ AV+IGGHVFKGILYDQG E+ Y          GG    GGS
Sbjct: 241 QCIQMSSIEDDEDQLAYQAAVSIGGHVFKGILYDQGHESQY----NNMVAAGGDTSSGGS 300

Query: 301 SSGVQ--PLNFITGATDATTASGGSSAALP--LLDPSSLYSTPLNSFM-AGTQFFLPPRS 329
           + GVQ    N    AT  TT+ G ++AA P   LDP SL+  PL++FM AGTQFF P RS
Sbjct: 301 AGGVQHHHHNSAAVATATTTSGGDATAAGPSNFLDP-SLFPAPLSTFMVAGTQFFPPSRS 350

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BLAST of Csor.00g060330 vs. ExPASy Swiss-Prot
Match: Q9XGX0 (Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.9e-69
Identity = 173/359 (48.19%), Postives = 215/359 (59.89%), Query Frame = 0


Query: 1   MSGFFSLG-GGGREDHQEHQEHQDHQ-----------EHQQNNDTNPETLFWYKGNVELW 60
           M+GFFSLG GGG      H+ + ++             +  +N    E    YKG +ELW
Sbjct: 1   MAGFFSLGHGGGGNTPDNHRTNTNNPSSSGTESWLWCRNPNSNADGGEAGPSYKGTLELW 60

Query: 61  QQQHHHHHQHPQQEQPLFQTQSRTPY-------SAALPVRTSDES--SSRSGNFMMIGSG 120
                   QHP  ++ +FQ Q +          +A L V  S+ S   +  G  MM+ SG
Sbjct: 61  --------QHPNNQEIIFQQQQQQQQRLDLYTSAAGLGVGPSNRSLIETSGGALMMMRSG 120

Query: 121 SGGGGISCQDCGNQAKKDCVHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQ 180
           SG GG SCQDCGNQ+KKDC HMRCRTCCKSRG  C THVKSTWVPAAKRRERQ++L+  Q
Sbjct: 121 SGSGGPSCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLSTGQ 180

Query: 181 TQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIP-NNTSGLEIGNFPAELNSPAVFRCVRV 240
              QL   G + PKR R+  P  S+S+A T IP NNTSGLE+GNFP E++S AVFRCVRV
Sbjct: 181 QPQQL---GGSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVRV 240

Query: 241 SSTDESDDQYAYQTAVNIGGHVFKGILYDQGPETNYIPPAETSSGGGGGGGGGGSSSGVQ 300
           SS D+ +++YAY+TAV+IGGHVFKG+LYDQG       PAE SS GGG           Q
Sbjct: 241 SSVDDEEEEYAYKTAVSIGGHVFKGVLYDQG-------PAERSSSGGGS----------Q 300

Query: 301 PLNFITGATDATTASGG--------SSAALPLLDPSSL-YSTPLNSFMAGTQFFLPPRS 329
           PLN IT    A+++S           S +   +DP+SL Y TP+N+FM GT FF   RS
Sbjct: 301 PLNLITAGPSASSSSPNVSCNNGVVGSTSDHYIDPASLNYPTPINTFMTGTHFFSNSRS 331

[Close]

BLAST of Csor.00g060330 vs. ExPASy Swiss-Prot
Match: Q9LQZ5 (Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.5e-58
Identity = 165/373 (44.24%), Postives = 210/373 (56.30%), Query Frame = 0


Query: 1   MSGFFSLGGGGREDHQEHQE-HQDHQEHQQNNDTNPETLFWYKGNV-------ELWQQQH 60
           M+GFF LGG     +   Q+ HQ  ++H   + +N   L+ YK  +       E+W  Q+
Sbjct: 1   MAGFFYLGGRDNNSNNNKQDHHQVDKDHHHQDKSN--YLYLYKDEIYNNNKGFEIWPPQY 60

Query: 61  HHHHQHPQQEQPLFQTQSRTP---YS-AALPVRTSDESS---SRSGNFMMIGSGSGG--- 120
               +H QQ+Q   Q  +  P   YS   +P  +S  ++   SRS  F ++     G   
Sbjct: 61  FQQQEHQQQQQQ--QQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYFNVVSDHEPGGFT 120

Query: 121 ----GGISCQDCGNQAKKDCVHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAAL 180
               GG++CQDCGNQAKKDC HMRCRTCCKSRGFHC+THVKSTWVPAAKRRER  +LA+L
Sbjct: 121 VTRQGGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASL 180

Query: 181 Q--------TQHQLHLH----GDNNPKRHRDYNPTSSSSLACTLI--PNNTSGLEIG-NF 240
           Q        TQ+   L     GDNN    +D++    S+LA T +   N+ SGLE+  + 
Sbjct: 181 QHHSASSRETQNAKRLREASGGDNND--DKDHSGGGGSALANTRVVNANSNSGLEVSQHL 240

Query: 241 PAELNSPAVFRCVRVSS--TDESDDQYAYQTAVNIGGHVFKGILYDQGPE------TNYI 300
           P E+NSPA+FRCVRVSS   DE D  YAYQTAVNIGGH+FKGILYDQGPE       N +
Sbjct: 241 PPEVNSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQDNHHLNLL 300

Query: 301 PPAETSSGGGGGGGGGGSSSGVQPLNFITGATDATTASGGSSAALPLLDPSSLYSTPLNS 329
               T++                        T   T +G ++  L +LDPSSLY   LNS
Sbjct: 301 ASTATTTN--------------------VEETATKTVTGNNNNGL-MLDPSSLYPAQLNS 346

[Close]

BLAST of Csor.00g060330 vs. ExPASy Swiss-Prot
Match: Q9FXH7 (Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.6e-52
Identity = 149/367 (40.60%), Postives = 204/367 (55.59%), Query Frame = 0


Query: 1   MSGFFSLGGGGREDHQEHQEHQDHQEHQQNNDTNPETLFWYKGNV-------ELWQQQHH 60
           M+G F LGG      ++H +   HQE   N D +   L+ YK  +       E++  Q+ 
Sbjct: 1   MAGLFYLGG------RDHNKQDHHQEKDHNEDKSNNYLYLYKDEIYNNNKGFEIFPPQYF 60

Query: 61  HHHQHPQQEQPLFQTQSRTPYSAALPVRTSDESSSRSGNFMM----------IGSGSGG- 120
                 QQ+Q          YS  +     + +++RS N  +          + S +GG 
Sbjct: 61  Q-----QQQQQNHAAAPTNLYSFGMVPSGGNINNNRSTNRSLYFNVVSDHEPVRSSTGGF 120

Query: 121 -----GGISCQDCGNQAKKDCVHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAA 180
                G ++CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWV AAKRRERQ +LA 
Sbjct: 121 TVTRQGNMNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQAQLAV 180

Query: 181 LQTQHQLHLH----GDNNPKRHRDYNPTS---SSSLACTLIPN-NTSGLEIGNFPAELNS 240
           L  +     +    GD++     D    S    S+LACT + N ++SGLE  + P E++S
Sbjct: 181 LPAKRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNASSSGLETSHLPPEISS 240

Query: 241 PAVFRCVRVSSTDESDDQYAYQTAVNIGGHVFKGILYDQGPETNYIPPAETSSGGGGGGG 300
           PAVFRC+RVSS D+ D++YAYQTAV+IGGHVFKGILYDQGP +++   + + +       
Sbjct: 241 PAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDHHRYSSSLN------- 300

Query: 301 GGGSSSGVQPLNFI-----TGATDATTASGGSSAALPLLDPSSLY---STPLNSFMA-GT 328
             G +S    LN +        T+A TA   ++ +   +DPSSLY   +TP N+F+A GT
Sbjct: 301 --GETSHQHHLNLMDSTPSAATTNAVTAVNTNNGS---IDPSSLYTAVATPFNAFVAGGT 344

[Close]

BLAST of Csor.00g060330 vs. NCBI nr
Match: KAG6603931.1 (Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 663 bits (1711), Expect = 1.91e-240
Identity = 328/328 (100.00%), Postives = 328/328 (100.00%), Query Frame = 0


Query: 1   MSGFFSLGGGGREDHQEHQEHQDHQEHQQNNDTNPETLFWYKGNVELWQQQHHHHHQHPQ 60
           MSGFFSLGGGGREDHQEHQEHQDHQEHQQNNDTNPETLFWYKGNVELWQQQHHHHHQHPQ
Sbjct: 1   MSGFFSLGGGGREDHQEHQEHQDHQEHQQNNDTNPETLFWYKGNVELWQQQHHHHHQHPQ 60

Query: 61  QEQPLFQTQSRTPYSAALPVRTSDESSSRSGNFMMIGSGSGGGGISCQDCGNQAKKDCVH 120
           QEQPLFQTQSRTPYSAALPVRTSDESSSRSGNFMMIGSGSGGGGISCQDCGNQAKKDCVH
Sbjct: 61  QEQPLFQTQSRTPYSAALPVRTSDESSSRSGNFMMIGSGSGGGGISCQDCGNQAKKDCVH 120

Query: 121 MRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLHGDNNPKRHRDYNP 180
           MRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLHGDNNPKRHRDYNP
Sbjct: 121 MRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLHGDNNPKRHRDYNP 180

Query: 181 TSSSSLACTLIPNNTSGLEIGNFPAELNSPAVFRCVRVSSTDESDDQYAYQTAVNIGGHV 240
           TSSSSLACTLIPNNTSGLEIGNFPAELNSPAVFRCVRVSSTDESDDQYAYQTAVNIGGHV
Sbjct: 181 TSSSSLACTLIPNNTSGLEIGNFPAELNSPAVFRCVRVSSTDESDDQYAYQTAVNIGGHV 240

Query: 241 FKGILYDQGPETNYIPPAETSSGGGGGGGGGGSSSGVQPLNFITGATDATTASGGSSAAL 300
           FKGILYDQGPETNYIPPAETSSGGGGGGGGGGSSSGVQPLNFITGATDATTASGGSSAAL
Sbjct: 241 FKGILYDQGPETNYIPPAETSSGGGGGGGGGGSSSGVQPLNFITGATDATTASGGSSAAL 300

Query: 301 PLLDPSSLYSTPLNSFMAGTQFFLPPRS 328
           PLLDPSSLYSTPLNSFMAGTQFFLPPRS
Sbjct: 301 PLLDPSSLYSTPLNSFMAGTQFFLPPRS 328

[Close]

BLAST of Csor.00g060330 vs. NCBI nr
Match: XP_023543255.1 (protein SHI RELATED SEQUENCE 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 639 bits (1648), Expect = 7.67e-231
Identity = 322/331 (97.28%), Postives = 325/331 (98.19%), Query Frame = 0


Query: 1   MSGFFSLGGGGREDHQEHQEHQDHQEHQ---QNNDTNPETLFWYKGNVELWQQQHHHHHQ 60
           MSGFFSLGGGGREDHQ+HQ+HQDHQ+HQ   QNNDTNPETLFWYKGNVELWQQQHHHH Q
Sbjct: 1   MSGFFSLGGGGREDHQDHQDHQDHQDHQDHQQNNDTNPETLFWYKGNVELWQQQHHHH-Q 60

Query: 61  HPQQEQPLFQTQSRTPYSAALPVRTSDESSSRSGNFMMIGSGSGGGGISCQDCGNQAKKD 120
           HPQQEQPLFQTQSRTPYSAALPVRTSDESSSRSGNFMMIGSGSGGGGISCQDCGNQAKKD
Sbjct: 61  HPQQEQPLFQTQSRTPYSAALPVRTSDESSSRSGNFMMIGSGSGGGGISCQDCGNQAKKD 120

Query: 121 CVHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLHGDNNPKRHRD 180
           CVHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLHGDNNPKRHRD
Sbjct: 121 CVHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLHGDNNPKRHRD 180

Query: 181 YNPTSSSSLACTLIPNNTSGLEIGNFPAELNSPAVFRCVRVSSTDESDDQYAYQTAVNIG 240
           YNPTSSSSLACTLIPNNTSGLEIGNFPAELNSPAVFRCVRVSSTDESDDQYAYQTAVNIG
Sbjct: 181 YNPTSSSSLACTLIPNNTSGLEIGNFPAELNSPAVFRCVRVSSTDESDDQYAYQTAVNIG 240

Query: 241 GHVFKGILYDQGPETNYIPPAETSSGGGGGGGGGGSSSGVQPLNFITGATDATTASGGSS 300
           GHVFKGILYDQGPETNYIPPAETSSGGGGGGGG  SSSGVQPLNFITGATDATTASGGSS
Sbjct: 241 GHVFKGILYDQGPETNYIPPAETSSGGGGGGGG--SSSGVQPLNFITGATDATTASGGSS 300

Query: 301 AALPLLDPSSLYSTPLNSFMAGTQFFLPPRS 328
           AALPLLDPSSLYSTPLNSFMAGTQFFLPPRS
Sbjct: 301 AALPLLDPSSLYSTPLNSFMAGTQFFLPPRS 328

[Close]

BLAST of Csor.00g060330 vs. NCBI nr
Match: XP_022949893.1 (protein SHI RELATED SEQUENCE 1-like [Cucurbita moschata] >XP_022949894.1 protein SHI RELATED SEQUENCE 1-like [Cucurbita moschata] >XP_022949895.1 protein SHI RELATED SEQUENCE 1-like [Cucurbita moschata])

HSP 1 Score: 637 bits (1643), Expect = 3.68e-230
Identity = 322/328 (98.17%), Postives = 323/328 (98.48%), Query Frame = 0


Query: 1   MSGFFSLGGGGREDHQEHQEHQDHQEHQQNNDTNPETLFWYKGNVELWQQQHHHHHQHPQ 60
           MSGFFSLGGGGRE   EHQ+HQDHQEHQQNNDTNPETLFWYKGNVELWQQQHHHH QHPQ
Sbjct: 1   MSGFFSLGGGGRE---EHQDHQDHQEHQQNNDTNPETLFWYKGNVELWQQQHHHH-QHPQ 60

Query: 61  QEQPLFQTQSRTPYSAALPVRTSDESSSRSGNFMMIGSGSGGGGISCQDCGNQAKKDCVH 120
           QEQPLFQTQSRTPYSAALPVRTSDESSSRSGNFMMIGSGSGGGGISCQDCGNQAKKDCVH
Sbjct: 61  QEQPLFQTQSRTPYSAALPVRTSDESSSRSGNFMMIGSGSGGGGISCQDCGNQAKKDCVH 120

Query: 121 MRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLHGDNNPKRHRDYNP 180
           MRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLHGDNNPKRHRDYNP
Sbjct: 121 MRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLHGDNNPKRHRDYNP 180

Query: 181 TSSSSLACTLIPNNTSGLEIGNFPAELNSPAVFRCVRVSSTDESDDQYAYQTAVNIGGHV 240
           TSSSSLACTLIPNNTSGLEIGNFPAELNSPAVFRCVRVSSTDESDDQYAYQTAVNIGGHV
Sbjct: 181 TSSSSLACTLIPNNTSGLEIGNFPAELNSPAVFRCVRVSSTDESDDQYAYQTAVNIGGHV 240

Query: 241 FKGILYDQGPETNYIPPAETSSGGGGGGGGGGSSSGVQPLNFITGATDATTASGGSSAAL 300
           FKGILYDQGPETNYIPPAETSSGGGGGGGGG SSSGVQPLNFITGATDATTASGGSSAAL
Sbjct: 241 FKGILYDQGPETNYIPPAETSSGGGGGGGGG-SSSGVQPLNFITGATDATTASGGSSAAL 300

Query: 301 PLLDPSSLYSTPLNSFMAGTQFFLPPRS 328
           PLLDPSSLYSTPLNSFMAGTQFFLPPRS
Sbjct: 301 PLLDPSSLYSTPLNSFMAGTQFFLPPRS 323

[Close]

BLAST of Csor.00g060330 vs. NCBI nr
Match: XP_022979003.1 (protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima] >XP_022979004.1 protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima])

HSP 1 Score: 612 bits (1579), Expect = 1.61e-220
Identity = 311/328 (94.82%), Postives = 312/328 (95.12%), Query Frame = 0


Query: 1   MSGFFSLGGGGREDHQEHQEHQDHQEHQQNNDTNPETLFWYKGNVELWQQQHHHHHQHPQ 60
           MSGFFSLGGGGREDHQ+HQ         QNNDTNPETLFWYKGNVELWQQQ HHHH  PQ
Sbjct: 1   MSGFFSLGGGGREDHQDHQ---------QNNDTNPETLFWYKGNVELWQQQQHHHH--PQ 60

Query: 61  QEQPLFQTQSRTPYSAALPVRTSDESSSRSGNFMMIGSGSGGGGISCQDCGNQAKKDCVH 120
           QEQPLFQTQSR PYSA LPVRTSDESSSRSGNFMMIGSGSGGGGISCQDCGNQAKKDC H
Sbjct: 61  QEQPLFQTQSRIPYSAPLPVRTSDESSSRSGNFMMIGSGSGGGGISCQDCGNQAKKDCAH 120

Query: 121 MRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLHGDNNPKRHRDYNP 180
           MRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLHGDNNPKRHRDYNP
Sbjct: 121 MRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLHGDNNPKRHRDYNP 180

Query: 181 TSSSSLACTLIPNNTSGLEIGNFPAELNSPAVFRCVRVSSTDESDDQYAYQTAVNIGGHV 240
           TSSSSLACTLIPNNTSGLEIGNFPAELNSPAVFRCVRVSSTDESDDQYAYQTAVNIGGHV
Sbjct: 181 TSSSSLACTLIPNNTSGLEIGNFPAELNSPAVFRCVRVSSTDESDDQYAYQTAVNIGGHV 240

Query: 241 FKGILYDQGPETNYIPPAETSSGGGGGGGGGGSSSGVQPLNFITGATDATTASGGSSAAL 300
           FKGILYDQGPETNYIPPAETSSGGGGGGGGG SSSGVQPLNFITGATDATTASGGSSAAL
Sbjct: 241 FKGILYDQGPETNYIPPAETSSGGGGGGGGG-SSSGVQPLNFITGATDATTASGGSSAAL 300

Query: 301 PLLDPSSLYSTPLNSFMAGTQFFLPPRS 328
           PLLDPSSLYSTPLNSFMAGTQFFLPPRS
Sbjct: 301 PLLDPSSLYSTPLNSFMAGTQFFLPPRS 316

[Close]

BLAST of Csor.00g060330 vs. NCBI nr
Match: XP_038881348.1 (protein SHI RELATED SEQUENCE 1-like [Benincasa hispida])

HSP 1 Score: 505 bits (1301), Expect = 9.66e-178
Identity = 270/335 (80.60%), Postives = 285/335 (85.07%), Query Frame = 0


Query: 1   MSGFFSLGGGG--REDHQEHQEHQDHQEHQQNNDTNPE---TLFWYKGNVELWQQQHHHH 60
           MSGFF+LGGGG  REDHQ+      HQ+H + N   P    +LFWYKGNVELWQQQ    
Sbjct: 1   MSGFFTLGGGGGGREDHQDQ-----HQQHNRPNQIIPPPDTSLFWYKGNVELWQQQ---- 60

Query: 61  HQHPQQEQPLFQTQSRT-----PYSAALPVRTSDESSSRSGNFMMIGSGSGGGGISCQDC 120
               QQEQPLFQTQSRT     PYSA +P+R SDESSSRSGNFMMI SGSGGGGISCQDC
Sbjct: 61  -PQQQQEQPLFQTQSRTTTTTPPYSATIPLRNSDESSSRSGNFMMISSGSGGGGISCQDC 120

Query: 121 GNQAKKDCVHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQH----QLHL 180
           GNQAKKDC HMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQ+KLAALQ+ H    QLHL
Sbjct: 121 GNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQSHHHHHHQLHL 180

Query: 181 HGDNNPKRHRDYNPTSSSSLACTLIP--NNTSGLEIGNFPAELNSPAVFRCVRVSSTDES 240
           HGDNNPKRHRDYNPTS+SSLACTLIP  NNTSGLEIGNFPAELNSPAVFRCVRVSSTD++
Sbjct: 181 HGDNNPKRHRDYNPTSTSSLACTLIPTNNNTSGLEIGNFPAELNSPAVFRCVRVSSTDDT 240

Query: 241 DDQYAYQTAVNIGGHVFKGILYDQGPETNYIPPAETSSGGGGGGGGGGSSSGVQPLNFIT 300
           D+QYAYQTAVNIGGHVFKGILYDQGPE NYIPPAETSSGGGG      SSSGVQPLNFI 
Sbjct: 241 DEQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGG------SSSGVQPLNFIA 300

Query: 301 GATDATTASGGSSAALPLLDPSSLYSTPLNSFMAG 319
           GA DATTASGGS+AALPL+DPSSLYSTPLNSFMAG
Sbjct: 301 GAADATTASGGSTAALPLMDPSSLYSTPLNSFMAG 319

[Close]

BLAST of Csor.00g060330 vs. ExPASy TrEMBL
Match: A0A6J1GE84 (protein SHI RELATED SEQUENCE 1-like OS=Cucurbita moschata OX=3662 GN=LOC111453153 PE=3 SV=1)

HSP 1 Score: 637 bits (1643), Expect = 1.78e-230
Identity = 322/328 (98.17%), Postives = 323/328 (98.48%), Query Frame = 0


Query: 1   MSGFFSLGGGGREDHQEHQEHQDHQEHQQNNDTNPETLFWYKGNVELWQQQHHHHHQHPQ 60
           MSGFFSLGGGGRE   EHQ+HQDHQEHQQNNDTNPETLFWYKGNVELWQQQHHHH QHPQ
Sbjct: 1   MSGFFSLGGGGRE---EHQDHQDHQEHQQNNDTNPETLFWYKGNVELWQQQHHHH-QHPQ 60

Query: 61  QEQPLFQTQSRTPYSAALPVRTSDESSSRSGNFMMIGSGSGGGGISCQDCGNQAKKDCVH 120
           QEQPLFQTQSRTPYSAALPVRTSDESSSRSGNFMMIGSGSGGGGISCQDCGNQAKKDCVH
Sbjct: 61  QEQPLFQTQSRTPYSAALPVRTSDESSSRSGNFMMIGSGSGGGGISCQDCGNQAKKDCVH 120

Query: 121 MRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLHGDNNPKRHRDYNP 180
           MRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLHGDNNPKRHRDYNP
Sbjct: 121 MRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLHGDNNPKRHRDYNP 180

Query: 181 TSSSSLACTLIPNNTSGLEIGNFPAELNSPAVFRCVRVSSTDESDDQYAYQTAVNIGGHV 240
           TSSSSLACTLIPNNTSGLEIGNFPAELNSPAVFRCVRVSSTDESDDQYAYQTAVNIGGHV
Sbjct: 181 TSSSSLACTLIPNNTSGLEIGNFPAELNSPAVFRCVRVSSTDESDDQYAYQTAVNIGGHV 240

Query: 241 FKGILYDQGPETNYIPPAETSSGGGGGGGGGGSSSGVQPLNFITGATDATTASGGSSAAL 300
           FKGILYDQGPETNYIPPAETSSGGGGGGGGG SSSGVQPLNFITGATDATTASGGSSAAL
Sbjct: 241 FKGILYDQGPETNYIPPAETSSGGGGGGGGG-SSSGVQPLNFITGATDATTASGGSSAAL 300

Query: 301 PLLDPSSLYSTPLNSFMAGTQFFLPPRS 328
           PLLDPSSLYSTPLNSFMAGTQFFLPPRS
Sbjct: 301 PLLDPSSLYSTPLNSFMAGTQFFLPPRS 323

[Close]

BLAST of Csor.00g060330 vs. ExPASy TrEMBL
Match: A0A6J1IUW1 (protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111478781 PE=3 SV=1)

HSP 1 Score: 612 bits (1579), Expect = 7.81e-221
Identity = 311/328 (94.82%), Postives = 312/328 (95.12%), Query Frame = 0


Query: 1   MSGFFSLGGGGREDHQEHQEHQDHQEHQQNNDTNPETLFWYKGNVELWQQQHHHHHQHPQ 60
           MSGFFSLGGGGREDHQ+HQ         QNNDTNPETLFWYKGNVELWQQQ HHHH  PQ
Sbjct: 1   MSGFFSLGGGGREDHQDHQ---------QNNDTNPETLFWYKGNVELWQQQQHHHH--PQ 60

Query: 61  QEQPLFQTQSRTPYSAALPVRTSDESSSRSGNFMMIGSGSGGGGISCQDCGNQAKKDCVH 120
           QEQPLFQTQSR PYSA LPVRTSDESSSRSGNFMMIGSGSGGGGISCQDCGNQAKKDC H
Sbjct: 61  QEQPLFQTQSRIPYSAPLPVRTSDESSSRSGNFMMIGSGSGGGGISCQDCGNQAKKDCAH 120

Query: 121 MRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLHGDNNPKRHRDYNP 180
           MRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLHGDNNPKRHRDYNP
Sbjct: 121 MRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLHGDNNPKRHRDYNP 180

Query: 181 TSSSSLACTLIPNNTSGLEIGNFPAELNSPAVFRCVRVSSTDESDDQYAYQTAVNIGGHV 240
           TSSSSLACTLIPNNTSGLEIGNFPAELNSPAVFRCVRVSSTDESDDQYAYQTAVNIGGHV
Sbjct: 181 TSSSSLACTLIPNNTSGLEIGNFPAELNSPAVFRCVRVSSTDESDDQYAYQTAVNIGGHV 240

Query: 241 FKGILYDQGPETNYIPPAETSSGGGGGGGGGGSSSGVQPLNFITGATDATTASGGSSAAL 300
           FKGILYDQGPETNYIPPAETSSGGGGGGGGG SSSGVQPLNFITGATDATTASGGSSAAL
Sbjct: 241 FKGILYDQGPETNYIPPAETSSGGGGGGGGG-SSSGVQPLNFITGATDATTASGGSSAAL 300

Query: 301 PLLDPSSLYSTPLNSFMAGTQFFLPPRS 328
           PLLDPSSLYSTPLNSFMAGTQFFLPPRS
Sbjct: 301 PLLDPSSLYSTPLNSFMAGTQFFLPPRS 316

[Close]

BLAST of Csor.00g060330 vs. ExPASy TrEMBL
Match: A0A5A7SN81 (Protein SHI RELATED SEQUENCE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001580 PE=3 SV=1)

HSP 1 Score: 498 bits (1283), Expect = 1.49e-175
Identity = 275/349 (78.80%), Postives = 282/349 (80.80%), Query Frame = 0


Query: 1   MSGFFSLGGGGREDHQEHQEHQDHQEHQQNNDTNP-------ETLFWYK-GNVELWQQQH 60
           MSGFF+LGGGG             +E Q NN  N         +LFWYK GNVELWQQQ 
Sbjct: 1   MSGFFTLGGGGG----------GREEEQNNNRPNQFIHPPPDSSLFWYKAGNVELWQQQQ 60

Query: 61  HHHHQHPQQEQPLFQTQSRT-----PYSAALPVRTSDESSSRSGNFMMIGSGSGGGGISC 120
            HHH H  QEQPLFQTQSRT     PYSA L VR SDESSSRSGNFMMI SGSGGGGISC
Sbjct: 61  QHHHHH--QEQPLFQTQSRTTTTTTPYSAPLTVRNSDESSSRSGNFMMISSGSGGGGISC 120

Query: 121 QDCGNQAKKDCVHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQH----- 180
           QDCGNQAKKDC HMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQ+KLAALQT H     
Sbjct: 121 QDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHHHQQQ 180

Query: 181 QLHLHG-DNNPKRHRDYNPTSSSSLACTLIP--NNTSGLEIGNFPAELNSPAVFRCVRVS 240
           QL LHG DNNPKRHRDYN   SSSLACTLIP  NNTSGLEIGNFPAELNSPAVFRCVRVS
Sbjct: 181 QLQLHGGDNNPKRHRDYN---SSSLACTLIPTNNNTSGLEIGNFPAELNSPAVFRCVRVS 240

Query: 241 STDESDDQYAYQTAVNIGGHVFKGILYDQGPETNYIPPAETSSGGGGGGGGGGSSSGVQP 300
           S D++DDQYAYQTAVNIGGHVFKGILYDQGPE NYIPP ETSSGGGG      SSSGVQP
Sbjct: 241 SADDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPGETSSGGGG------SSSGVQP 300

Query: 301 LNFITGATDATTASGGSSAALPLLDPSSLYSTPLNSFMAGTQFFLPPRS 328
           LNFITGA D TT SGGS+AALPLLDPSSLYSTPLNSFMAGTQFFLPPRS
Sbjct: 301 LNFITGAADTTTGSGGSTAALPLLDPSSLYSTPLNSFMAGTQFFLPPRS 328

[Close]

BLAST of Csor.00g060330 vs. ExPASy TrEMBL
Match: A0A1S3B2J6 (protein SHI RELATED SEQUENCE 1 OS=Cucumis melo OX=3656 GN=LOC103485098 PE=3 SV=1)

HSP 1 Score: 498 bits (1283), Expect = 1.49e-175
Identity = 275/349 (78.80%), Postives = 282/349 (80.80%), Query Frame = 0


Query: 1   MSGFFSLGGGGREDHQEHQEHQDHQEHQQNNDTNP-------ETLFWYK-GNVELWQQQH 60
           MSGFF+LGGGG             +E Q NN  N         +LFWYK GNVELWQQQ 
Sbjct: 1   MSGFFTLGGGGG----------GREEEQNNNRPNQFIHPPPDSSLFWYKAGNVELWQQQQ 60

Query: 61  HHHHQHPQQEQPLFQTQSRT-----PYSAALPVRTSDESSSRSGNFMMIGSGSGGGGISC 120
            HHH H  QEQPLFQTQSRT     PYSA L VR SDESSSRSGNFMMI SGSGGGGISC
Sbjct: 61  QHHHHH--QEQPLFQTQSRTTTTTTPYSAPLTVRNSDESSSRSGNFMMISSGSGGGGISC 120

Query: 121 QDCGNQAKKDCVHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQH----- 180
           QDCGNQAKKDC HMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQ+KLAALQT H     
Sbjct: 121 QDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHHHQQQ 180

Query: 181 QLHLHG-DNNPKRHRDYNPTSSSSLACTLIP--NNTSGLEIGNFPAELNSPAVFRCVRVS 240
           QL LHG DNNPKRHRDYN   SSSLACTLIP  NNTSGLEIGNFPAELNSPAVFRCVRVS
Sbjct: 181 QLQLHGGDNNPKRHRDYN---SSSLACTLIPTNNNTSGLEIGNFPAELNSPAVFRCVRVS 240

Query: 241 STDESDDQYAYQTAVNIGGHVFKGILYDQGPETNYIPPAETSSGGGGGGGGGGSSSGVQP 300
           S D++DDQYAYQTAVNIGGHVFKGILYDQGPE NYIPP ETSSGGGG      SSSGVQP
Sbjct: 241 SADDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPGETSSGGGG------SSSGVQP 300

Query: 301 LNFITGATDATTASGGSSAALPLLDPSSLYSTPLNSFMAGTQFFLPPRS 328
           LNFITGA D TT SGGS+AALPLLDPSSLYSTPLNSFMAGTQFFLPPRS
Sbjct: 301 LNFITGAADTTTGSGGSTAALPLLDPSSLYSTPLNSFMAGTQFFLPPRS 328

[Close]

BLAST of Csor.00g060330 vs. ExPASy TrEMBL
Match: A0A0A0KGL4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G504650 PE=3 SV=1)

HSP 1 Score: 494 bits (1273), Expect = 5.54e-174
Identity = 273/350 (78.00%), Postives = 279/350 (79.71%), Query Frame = 0


Query: 1   MSGFFSLGGGGREDHQEHQEHQDHQEHQQNNDTNP-------ETLFWYK-GNVELWQQQH 60
           MSGFF+LGGGG              E Q NN  N         +LFWYK GNVELWQQQ 
Sbjct: 1   MSGFFTLGGGGG----------GRDEEQNNNRPNQFIHPPPDSSLFWYKAGNVELWQQQQ 60

Query: 61  HHHHQHPQQEQPLFQTQSRT-----PYSAALPVRTSDESSSRSGNFMMIGSGSGGGGISC 120
              H H  QEQPLFQTQSRT     PYSA L VR SDESSSRSGNFMMI SGSGGGGISC
Sbjct: 61  QQQHHHHHQEQPLFQTQSRTTTTTTPYSAPLAVRNSDESSSRSGNFMMISSGSGGGGISC 120

Query: 121 QDCGNQAKKDCVHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQH----- 180
           QDCGNQAKKDC HMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQ+KLAALQT H     
Sbjct: 121 QDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHHHHHQ 180

Query: 181 -QLHLHG-DNNPKRHRDYNPTSSSSLACTLIP--NNTSGLEIGNFPAELNSPAVFRCVRV 240
            QL LHG DNNPKRHRDYN   SSSLACTLIP  NNTSGLEIGNFPAELNSPAVFRCVRV
Sbjct: 181 QQLQLHGGDNNPKRHRDYN---SSSLACTLIPTNNNTSGLEIGNFPAELNSPAVFRCVRV 240

Query: 241 SSTDESDDQYAYQTAVNIGGHVFKGILYDQGPETNYIPPAETSSGGGGGGGGGGSSSGVQ 300
           SS D++DDQYAYQTAVNIGGHVFKGILYDQGPE NYIPP ETSSGGGG      SSSGVQ
Sbjct: 241 SSADDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPGETSSGGGG------SSSGVQ 300

Query: 301 PLNFITGATDATTASGGSSAALPLLDPSSLYSTPLNSFMAGTQFFLPPRS 328
           PLNFI GA DATT SGGS+AALPLLDPSSLYSTPLNSFMAGTQFFLPPRS
Sbjct: 301 PLNFIAGAADATTGSGGSTAALPLLDPSSLYSTPLNSFMAGTQFFLPPRS 331

[Close]

BLAST of Csor.00g060330 vs. TAIR 10
Match: AT3G51060.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 282.3 bits (721), Expect = 4.8e-76
Identity = 181/382 (47.38%), Postives = 227/382 (59.42%), Query Frame = 0


Query: 1   MSGFFSLGGGGREDHQEHQEHQDHQEHQQNNDTNPETLFWYK------------------ 60
           M+GFFSL GGG          +DH+ +        E   WY+                  
Sbjct: 1   MAGFFSLDGGGGGGGGGGNNQEDHRSNTNPPPPVSEAWLWYRNPNVNANANTNVNANAPS 60

Query: 61  ------GNVELW----QQQHHHHHQHPQQEQPLFQTQSRTPYSAA------LPVRTSDES 120
                 G +ELW    QQ+    HQ  QQ   L+ + +      +      +   TS   
Sbjct: 61  SSNAALGTLELWQNHNQQEIMFQHQQHQQRLDLYSSAAGLGVGPSNHNQFDISGETSTAG 120

Query: 121 SSRSGNFMMI---GSGSGGGGISCQDCGNQAKKDCVHMRCRTCCKSRGFHCETHVKSTWV 180
           + R+   MMI   GSG G GG+SCQDCGNQAKKDC HMRCRTCCKSRGF C THV+STWV
Sbjct: 121 AGRAAAMMMIRSGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWV 180

Query: 181 PAAKRRERQEKLAALQTQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIPNNTSGLEIGNF 240
           PAAKRRERQ++LA +Q Q QL   G++ PKRHR+  P +SSSL CT IP++ SGLE+GNF
Sbjct: 181 PAAKRRERQQQLATVQPQTQLP-RGESVPKRHRENLPATSSSLVCTRIPSH-SGLEVGNF 240

Query: 241 PAELNSPAVFRCVRVSSTDESDDQYAYQTAVNIGGHVFKGILYDQGPET------NYIPP 300
           PAE++S AVFRCVRVSS ++ ++++AYQTAV+IGGH+FKGILYD GP +      N +  
Sbjct: 241 PAEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSGGGGYNVVAA 300

Query: 301 AETSSGGGGGGGGGGSSSGVQPLNFIT-GATDATTAS------GG----SSAALPLLDPS 329
            E+SSGGG          G Q LN IT G+    TAS      GG    S+AA   +DP+
Sbjct: 301 GESSSGGG----------GAQQLNLITAGSVTVATASSSTPNLGGIGSSSAAAATYIDPA 360

[Close]

BLAST of Csor.00g060330 vs. TAIR 10
Match: AT5G66350.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 264.2 bits (674), Expect = 1.4e-70
Identity = 173/359 (48.19%), Postives = 215/359 (59.89%), Query Frame = 0


Query: 1   MSGFFSLG-GGGREDHQEHQEHQDHQ-----------EHQQNNDTNPETLFWYKGNVELW 60
           M+GFFSLG GGG      H+ + ++             +  +N    E    YKG +ELW
Sbjct: 1   MAGFFSLGHGGGGNTPDNHRTNTNNPSSSGTESWLWCRNPNSNADGGEAGPSYKGTLELW 60

Query: 61  QQQHHHHHQHPQQEQPLFQTQSRTPY-------SAALPVRTSDES--SSRSGNFMMIGSG 120
                   QHP  ++ +FQ Q +          +A L V  S+ S   +  G  MM+ SG
Sbjct: 61  --------QHPNNQEIIFQQQQQQQQRLDLYTSAAGLGVGPSNRSLIETSGGALMMMRSG 120

Query: 121 SGGGGISCQDCGNQAKKDCVHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQ 180
           SG GG SCQDCGNQ+KKDC HMRCRTCCKSRG  C THVKSTWVPAAKRRERQ++L+  Q
Sbjct: 121 SGSGGPSCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLSTGQ 180

Query: 181 TQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIP-NNTSGLEIGNFPAELNSPAVFRCVRV 240
              QL   G + PKR R+  P  S+S+A T IP NNTSGLE+GNFP E++S AVFRCVRV
Sbjct: 181 QPQQL---GGSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVRV 240

Query: 241 SSTDESDDQYAYQTAVNIGGHVFKGILYDQGPETNYIPPAETSSGGGGGGGGGGSSSGVQ 300
           SS D+ +++YAY+TAV+IGGHVFKG+LYDQG       PAE SS GGG           Q
Sbjct: 241 SSVDDEEEEYAYKTAVSIGGHVFKGVLYDQG-------PAERSSSGGGS----------Q 300

Query: 301 PLNFITGATDATTASGG--------SSAALPLLDPSSL-YSTPLNSFMAGTQFFLPPRS 329
           PLN IT    A+++S           S +   +DP+SL Y TP+N+FM GT FF   RS
Sbjct: 301 PLNLITAGPSASSSSPNVSCNNGVVGSTSDHYIDPASLNYPTPINTFMTGTHFFSNSRS 331

[Close]

BLAST of Csor.00g060330 vs. TAIR 10
Match: AT1G75520.1 (SHI-related sequence 5 )

HSP 1 Score: 228.0 bits (580), Expect = 1.1e-59
Identity = 165/373 (44.24%), Postives = 210/373 (56.30%), Query Frame = 0


Query: 1   MSGFFSLGGGGREDHQEHQE-HQDHQEHQQNNDTNPETLFWYKGNV-------ELWQQQH 60
           M+GFF LGG     +   Q+ HQ  ++H   + +N   L+ YK  +       E+W  Q+
Sbjct: 1   MAGFFYLGGRDNNSNNNKQDHHQVDKDHHHQDKSN--YLYLYKDEIYNNNKGFEIWPPQY 60

Query: 61  HHHHQHPQQEQPLFQTQSRTP---YS-AALPVRTSDESS---SRSGNFMMIGSGSGG--- 120
               +H QQ+Q   Q  +  P   YS   +P  +S  ++   SRS  F ++     G   
Sbjct: 61  FQQQEHQQQQQQ--QQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYFNVVSDHEPGGFT 120

Query: 121 ----GGISCQDCGNQAKKDCVHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAAL 180
               GG++CQDCGNQAKKDC HMRCRTCCKSRGFHC+THVKSTWVPAAKRRER  +LA+L
Sbjct: 121 VTRQGGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASL 180

Query: 181 Q--------TQHQLHLH----GDNNPKRHRDYNPTSSSSLACTLI--PNNTSGLEIG-NF 240
           Q        TQ+   L     GDNN    +D++    S+LA T +   N+ SGLE+  + 
Sbjct: 181 QHHSASSRETQNAKRLREASGGDNND--DKDHSGGGGSALANTRVVNANSNSGLEVSQHL 240

Query: 241 PAELNSPAVFRCVRVSS--TDESDDQYAYQTAVNIGGHVFKGILYDQGPE------TNYI 300
           P E+NSPA+FRCVRVSS   DE D  YAYQTAVNIGGH+FKGILYDQGPE       N +
Sbjct: 241 PPEVNSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQDNHHLNLL 300

Query: 301 PPAETSSGGGGGGGGGGSSSGVQPLNFITGATDATTASGGSSAALPLLDPSSLYSTPLNS 329
               T++                        T   T +G ++  L +LDPSSLY   LNS
Sbjct: 301 ASTATTTN--------------------VEETATKTVTGNNNNGL-MLDPSSLYPAQLNS 346

[Close]

BLAST of Csor.00g060330 vs. TAIR 10
Match: AT1G19790.1 (SHI-related sequence 7 )

HSP 1 Score: 208.0 bits (528), Expect = 1.2e-53
Identity = 149/367 (40.60%), Postives = 204/367 (55.59%), Query Frame = 0


Query: 1   MSGFFSLGGGGREDHQEHQEHQDHQEHQQNNDTNPETLFWYKGNV-------ELWQQQHH 60
           M+G F LGG      ++H +   HQE   N D +   L+ YK  +       E++  Q+ 
Sbjct: 1   MAGLFYLGG------RDHNKQDHHQEKDHNEDKSNNYLYLYKDEIYNNNKGFEIFPPQYF 60

Query: 61  HHHQHPQQEQPLFQTQSRTPYSAALPVRTSDESSSRSGNFMM----------IGSGSGG- 120
                 QQ+Q          YS  +     + +++RS N  +          + S +GG 
Sbjct: 61  Q-----QQQQQNHAAAPTNLYSFGMVPSGGNINNNRSTNRSLYFNVVSDHEPVRSSTGGF 120

Query: 121 -----GGISCQDCGNQAKKDCVHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAA 180
                G ++CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWV AAKRRERQ +LA 
Sbjct: 121 TVTRQGNMNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQAQLAV 180

Query: 181 LQTQHQLHLH----GDNNPKRHRDYNPTS---SSSLACTLIPN-NTSGLEIGNFPAELNS 240
           L  +     +    GD++     D    S    S+LACT + N ++SGLE  + P E++S
Sbjct: 181 LPAKRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNASSSGLETSHLPPEISS 240

Query: 241 PAVFRCVRVSSTDESDDQYAYQTAVNIGGHVFKGILYDQGPETNYIPPAETSSGGGGGGG 300
           PAVFRC+RVSS D+ D++YAYQTAV+IGGHVFKGILYDQGP +++   + + +       
Sbjct: 241 PAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDHHRYSSSLN------- 300

Query: 301 GGGSSSGVQPLNFI-----TGATDATTASGGSSAALPLLDPSSLY---STPLNSFMA-GT 328
             G +S    LN +        T+A TA   ++ +   +DPSSLY   +TP N+F+A GT
Sbjct: 301 --GETSHQHHLNLMDSTPSAATTNAVTAVNTNNGS---IDPSSLYTAVATPFNAFVAGGT 344

[Close]

BLAST of Csor.00g060330 vs. TAIR 10
Match: AT1G19790.2 (SHI-related sequence 7 )

HSP 1 Score: 208.0 bits (528), Expect = 1.2e-53
Identity = 149/367 (40.60%), Postives = 204/367 (55.59%), Query Frame = 0


Query: 1   MSGFFSLGGGGREDHQEHQEHQDHQEHQQNNDTNPETLFWYKGNV-------ELWQQQHH 60
           M+G F LGG      ++H +   HQE   N D +   L+ YK  +       E++  Q+ 
Sbjct: 1   MAGLFYLGG------RDHNKQDHHQEKDHNEDKSNNYLYLYKDEIYNNNKGFEIFPPQYF 60

Query: 61  HHHQHPQQEQPLFQTQSRTPYSAALPVRTSDESSSRSGNFMM----------IGSGSGG- 120
                 QQ+Q          YS  +     + +++RS N  +          + S +GG 
Sbjct: 61  Q-----QQQQQNHAAAPTNLYSFGMVPSGGNINNNRSTNRSLYFNVVSDHEPVRSSTGGF 120

Query: 121 -----GGISCQDCGNQAKKDCVHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAA 180
                G ++CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWV AAKRRERQ +LA 
Sbjct: 121 TVTRQGNMNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQAQLAV 180

Query: 181 LQTQHQLHLH----GDNNPKRHRDYNPTS---SSSLACTLIPN-NTSGLEIGNFPAELNS 240
           L  +     +    GD++     D    S    S+LACT + N ++SGLE  + P E++S
Sbjct: 181 LPAKRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNASSSGLETSHLPPEISS 240

Query: 241 PAVFRCVRVSSTDESDDQYAYQTAVNIGGHVFKGILYDQGPETNYIPPAETSSGGGGGGG 300
           PAVFRC+RVSS D+ D++YAYQTAV+IGGHVFKGILYDQGP +++   + + +       
Sbjct: 241 PAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDHHRYSSSLN------- 300

Query: 301 GGGSSSGVQPLNFI-----TGATDATTASGGSSAALPLLDPSSLY---STPLNSFMA-GT 328
             G +S    LN +        T+A TA   ++ +   +DPSSLY   +TP N+F+A GT
Sbjct: 301 --GETSHQHHLNLMDSTPSAATTNAVTAVNTNNGS---IDPSSLYTAVATPFNAFVAGGT 344

The following BLAST results are available for this feature:

BLAST of Csor.00g060330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SD40	6.8e-75	47.38	Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2	[more]
K4B6C9	3.7e-73	48.61	Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 ...	[more]
Q9XGX0	1.9e-69	48.19	Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1	[more]
Q9LQZ5	1.5e-58	44.24	Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1	[more]
Q9FXH7	1.6e-52	40.60	Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1	[more]

BLAST of Csor.00g060330 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6603931.1	1.91e-240	100.00	Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023543255.1	7.67e-231	97.28	protein SHI RELATED SEQUENCE 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022949893.1	3.68e-230	98.17	protein SHI RELATED SEQUENCE 1-like [Cucurbita moschata] >XP_022949894.1 protein...	[more]
XP_022979003.1	1.61e-220	94.82	protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima] >XP_022979004.1 protein S...	[more]
XP_038881348.1	9.66e-178	80.60	protein SHI RELATED SEQUENCE 1-like [Benincasa hispida]	[more]

BLAST of Csor.00g060330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GE84	1.78e-230	98.17	protein SHI RELATED SEQUENCE 1-like OS=Cucurbita moschata OX=3662 GN=LOC11145315...	[more]
A0A6J1IUW1	7.81e-221	94.82	protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111478781 ...	[more]
A0A5A7SN81	1.49e-175	78.80	Protein SHI RELATED SEQUENCE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3B2J6	1.49e-175	78.80	protein SHI RELATED SEQUENCE 1 OS=Cucumis melo OX=3656 GN=LOC103485098 PE=3 SV=1	[more]
A0A0A0KGL4	5.54e-174	78.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G504650 PE=3 SV=1	[more]

BLAST of Csor.00g060330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51060.1	4.8e-76	47.38	Lateral root primordium (LRP) protein-related	[more]
AT5G66350.1	1.4e-70	48.19	Lateral root primordium (LRP) protein-related	[more]
AT1G75520.1	1.1e-59	44.24	SHI-related sequence 5	[more]
AT1G19790.1	1.2e-53	40.60	SHI-related sequence 7	[more]
AT1G19790.2	1.2e-53	40.60	SHI-related sequence 7	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006511	SHORT INTERNODES, C-terminal	TIGRFAM	TIGR01624	TIGR01624	coord: 203..250 e-value: 2.8E-27 score: 92.4
None	No IPR available	PFAM	PF05142	DUF702	coord: 104..251 e-value: 9.4E-66 score: 221.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..95
None	No IPR available	PANTHER	PTHR31604:SF4	PROTEIN SHORT INTERNODES	coord: 1..324
IPR006510	Zinc finger, lateral root primordium type 1	TIGRFAM	TIGR01623	TIGR01623	coord: 106..148 e-value: 3.5E-28 score: 95.3
IPR007818	SHI protein family	PANTHER	PTHR31604	PROTEIN LATERAL ROOT PRIMORDIUM 1	coord: 1..324

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g060330.m01	Csor.00g060330.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0009851	auxin biosynthetic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding