Csor.00g060180 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g060180
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr03: 6313863 .. 6315739 (-)
RNA-Seq ExpressionCsor.00g060180
SyntenyCsor.00g060180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAATGGAAATGGAAATCGAAAGGACCCACATTGAGAGTTTAAGGATACTTGGGGAAGCCCATGTGGTAGGTTCTTGGAGGGTCGAGGTCGGGGTCAGGTGGTCTGTGAGTACTTTTATATATGAAAACGATGGTAGAAGAGGAGGATCCAAAAGGCCATTAAAATGGGTGTGTAGCAGCACTTTGTTACCCTGTGCTAACGTAAGATGATAACAACTCTGAAAGTAGGGTGATAAGGACAGGTTGTAGTATTGTGGCCGGCCATGCCCATGACACCTCCTTGCTTCGGTGGCCTGCTCCTATGTGTGTTTCCTTTCAAGGGTCCCAACTTCCAACCAACTACCCAATAACATATTCTTTTCAAAGTTCTCAACCTCGTTGGATTCCCTGTCTTACATCTGCTCTTCCCCAATTATTCTCTCCTTCTCTCTCCTCACTGCTCATCAACTTCCGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCATTAGAAAGAATCAAAATTTTCCATCAAAAACTGTTCCAAAATCTAATATATATGGCTTCTTTGATTTCTTGTACGAAAGATCTAATCTTTCCTTGAGTGTGTGTGCGCGCTCTGCGACTTTTGATAGCATGATGGGACAAATTGTTCTAATCTTTAATTATCTATACTAGCACAGATGATCAAAGCTGAAATGGAAATATTTATTAATTCTTTTCCCTCCACTTTTCTTTCTCTTTTGTTATCCGGATATTTGAAGGTATCATTTATTTATGTACTATGTTCTTCCCAATCATGATCACTAATTTTGCTTGCCATATTTGTGAAGGTGGAAGCTGCATTTTTTTAGCTAAATTCAAGTGTCTCGGAGCTACATCTTCTTCCCCCTCTCCAGGAGTGGAGTTTGACTTGGATATTTAAAATATTTTTAAAATTCAGATTGTATATAAATTAATTACTATAAAAAAAAAAAAAAAAAAAACATTTCTTTCTTTTTCCATAAAGTTAAATTAGTTTTATTTATTTATTTATTTATTTATTTATTATTATTATTTGTTAAATATGAAAGTTAGTGAATCTGGTTATTTAACCTCATTTATATAAACTGGCGACAGGGAATGGAAAGAGGGAACGGAAAAGGAGAGGGAGCTACTGAGAGGGATGATGATCATGAAACTCCATAAACTCGGTAACTCCAGTTTTCCCCTCTCTAAGCTTGTCAATGTTCTTGTTAATTTTGTATCGCTTAAAATCGTTGAAGCTTATGATTGGTGCATCATCTACTTATTTGTTATGTTGAGAGGTTTAAACAGTTAGTCTGTTTATTAAAATCGAACCGATTAACATATGTCTTAGAGTTTTAAATTTTTATAGAGATAACAACTTAATCCACCTACTTTAGCTTATAACATGTTAGACATATATTTTTAAATTTATAATAGTTTAGTCTATTAACAGGTTAGTTTCTTTATTTTAACATTTGTGGCAATTTAATTTTTACAAGTGAAAATTCAACCAATATTAAGTATCTGTAGTTTATAAGCATATTCGTTTGTTAACTAGTTTATTAGTCTCCAACATTTTAAAATATCATTAAATTTTAATGATATTTTTTCCCAAATGAAAGGGTTAAAAAATGCATGTTATATATGCAATTAAATTCATACAAAATTGAAAAGAAAAATTAAATGGTTACAAATCATAGGGAGAGTAAATTGTTGAAAGAGAGGCCCAAAATGTTTTATTAAACCAATTGAATAAGAAAGATGCTAAAACTTGAAAATCCGAGAAAACCCGTTTTAAAATTTACAATTTTTTTTTTTTTTTAAGTGACTCCGGCGGAGGTGGCGGAGCACAGCTGCTGA

mRNA sequence

ATGGTAATGGAAATGGAAATCGAAAGGACCCACATTGAGAGTTTAAGGATACTTGGGGAAGCCCATGTGGTAGGTTCTTGGAGGGTCGAGGTCGGGGTCAGGGAATGGAAAGAGGGAACGGAAAAGGAGAGGGAGCTACTGAGAGGGATGATGATCATGAAACTCCATAAACTCGTGACTCCGGCGGAGGTGGCGGAGCACAGCTGCTGA

Coding sequence (CDS)

ATGGTAATGGAAATGGAAATCGAAAGGACCCACATTGAGAGTTTAAGGATACTTGGGGAAGCCCATGTGGTAGGTTCTTGGAGGGTCGAGGTCGGGGTCAGGGAATGGAAAGAGGGAACGGAAAAGGAGAGGGAGCTACTGAGAGGGATGATGATCATGAAACTCCATAAACTCGTGACTCCGGCGGAGGTGGCGGAGCACAGCTGCTGA

Protein sequence

MVMEMEIERTHIESLRILGEAHVVGSWRVEVGVREWKEGTEKERELLRGMMIMKLHKLVTPAEVAEHSC
Homology
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BLAST of Csor.00g060180 vs. NCBI nr
Match: KAG6603946.1 (hypothetical protein SDJN03_04555, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 141 bits (356), Expect = 2.44e-42
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  MVMEMEIERTHIESLRILGEAHVVGSWRVEVGVREWKEGTEKERELLRGMMIMKLHKLVT 60
          MVMEMEIERTHIESLRILGEAHVVGSWRVEVGVREWKEGTEKERELLRGMMIMKLHKLVT
Sbjct: 1  MVMEMEIERTHIESLRILGEAHVVGSWRVEVGVREWKEGTEKERELLRGMMIMKLHKLVT 60

Query: 61 PAEVAEHSC 69
          PAEVAEHSC
Sbjct: 61 PAEVAEHSC 69

The following BLAST results are available for this feature:
BLAST of Csor.00g060180 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g060180 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6603946.12.44e-42100.00hypothetical protein SDJN03_04555, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g060180 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g060180 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g060180.m01Csor.00g060180.m01mRNA