Csor.00g059520 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g059520
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr03: 6601241 .. 6601492 (+)
RNA-Seq ExpressionCsor.00g059520
SyntenyCsor.00g059520
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGATATTGCAATTCTTGTTGCAGAGGAATACGAGAGAAGGATGAAGAATCCAAGGCAAGCGCAGGAGACGCAAAAGCTTGAAGATTTGAGTTCTGGGGTTTCCATCTCTGCAACTGCTTCGGCGATTAGGATGAAGAAGATGATGGAAATAGCAATACAAAATGCTGAGATGACGGAATTCAAATGGGTTTTCGAACCCAAATCCCAAATTGGCCGAGCCGCTTCCACCGGATTCTTCTCCGCCTGA

mRNA sequence

ATGGCGGATATTGCAATTCTTGTTGCAGAGGAATACGAGAGAAGGATGAAGAATCCAAGGCAAGCGCAGGAGACGCAAAAGCTTGAAGATTTGAGTTCTGGGGTTTCCATCTCTGCAACTGCTTCGGCGATTAGGATGAAGAAGATGATGGAAATAGCAATACAAAATGCTGAGATGACGGAATTCAAATGGGTTTTCGAACCCAAATCCCAAATTGGCCGAGCCGCTTCCACCGGATTCTTCTCCGCCTGA

Coding sequence (CDS)

ATGGCGGATATTGCAATTCTTGTTGCAGAGGAATACGAGAGAAGGATGAAGAATCCAAGGCAAGCGCAGGAGACGCAAAAGCTTGAAGATTTGAGTTCTGGGGTTTCCATCTCTGCAACTGCTTCGGCGATTAGGATGAAGAAGATGATGGAAATAGCAATACAAAATGCTGAGATGACGGAATTCAAATGGGTTTTCGAACCCAAATCCCAAATTGGCCGAGCCGCTTCCACCGGATTCTTCTCCGCCTGA

Protein sequence

MADIAILVAEEYERRMKNPRQAQETQKLEDLSSGVSISATASAIRMKKMMEIAIQNAEMTEFKWVFEPKSQIGRAASTGFFSA
Homology
BLAST of Csor.00g059520 vs. NCBI nr
Match: KAG6604012.1 (hypothetical protein SDJN03_04621, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034176.1 hypothetical protein SDJN02_03903, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 158 bits (400), Expect = 1.27e-48
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPRQAQETQKLEDLSSGVSISATASAIRMKKMMEIAIQNAEMT 60
          MADIAILVAEEYERRMKNPRQAQETQKLEDLSSGVSISATASAIRMKKMMEIAIQNAEMT
Sbjct: 1  MADIAILVAEEYERRMKNPRQAQETQKLEDLSSGVSISATASAIRMKKMMEIAIQNAEMT 60

Query: 61 EFKWVFEPKSQIGRAASTGFFSA 83
          EFKWVFEPKSQIGRAASTGFFSA
Sbjct: 61 EFKWVFEPKSQIGRAASTGFFSA 83

BLAST of Csor.00g059520 vs. NCBI nr
Match: XP_038882836.1 (uncharacterized protein LOC120073972 [Benincasa hispida])

HSP 1 Score: 137 bits (344), Expect = 4.45e-40
Identity = 69/83 (83.13%), Postives = 79/83 (95.18%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPRQAQETQKLEDLSSGVSISATASAIRMKKMMEIAIQNAEMT 60
          MADIAILVAEEYERRMKNP Q QE Q+L+DL+SGVSISATA++IRMKKMME+A QN++++
Sbjct: 1  MADIAILVAEEYERRMKNPTQVQEKQELQDLASGVSISATATSIRMKKMMEMAKQNSQIS 60

Query: 61 EFKWVFEPKSQIGRAASTGFFSA 83
          EFKWVFEPKSQIGRAASTGFFSA
Sbjct: 61 EFKWVFEPKSQIGRAASTGFFSA 83

BLAST of Csor.00g059520 vs. NCBI nr
Match: XP_011657992.1 (uncharacterized protein LOC105435930 [Cucumis sativus] >KGN48782.1 hypothetical protein Csa_003490 [Cucumis sativus])

HSP 1 Score: 118 bits (296), Expect = 1.11e-32
Identity = 68/89 (76.40%), Postives = 78/89 (87.64%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPRQAQET--QKLEDL-SSGVSISATASAIRMKKMMEIAIQN- 60
          MADIAILVAEEYERR KNPR+ QE   Q+L++L SSGVSISATA++IRMKKMME+A ++ 
Sbjct: 1  MADIAILVAEEYERRTKNPRRGQEMIRQELQELGSSGVSISATATSIRMKKMMEMAKKHN 60

Query: 61 --AEMTEFKWVFEPKSQIGRAASTGFFSA 83
            AEM+EF WVFEPKSQIGRAASTGFFSA
Sbjct: 61 YSAEMSEFNWVFEPKSQIGRAASTGFFSA 89

BLAST of Csor.00g059520 vs. NCBI nr
Match: XP_023003555.1 (uncharacterized protein LOC111497122 [Cucurbita maxima])

HSP 1 Score: 117 bits (292), Expect = 3.69e-32
Identity = 64/84 (76.19%), Postives = 73/84 (86.90%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPRQAQETQ-KLEDLSSGVSISATASAIRMKKMMEIAIQNAEM 60
          MADIAILVAEEYERRMKNPRQ ++   +++DL SGVSISATAS  R+KKMME+ ++ AE 
Sbjct: 1  MADIAILVAEEYERRMKNPRQEEKAAAEVQDLVSGVSISATAS--RVKKMMELELELAER 60

Query: 61 TEFKWVFEPKSQIGRAASTGFFSA 83
           EFKWVFEPKSQIGRAASTGFFSA
Sbjct: 61 NEFKWVFEPKSQIGRAASTGFFSA 82

BLAST of Csor.00g059520 vs. NCBI nr
Match: XP_022962826.1 (uncharacterized protein LOC111463202 [Cucurbita moschata])

HSP 1 Score: 116 bits (291), Expect = 5.24e-32
Identity = 64/84 (76.19%), Postives = 73/84 (86.90%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPRQAQETQ-KLEDLSSGVSISATASAIRMKKMMEIAIQNAEM 60
          MADIAILVAEEYERRMKNPRQ Q+   +++DL SGVSISATAS  R+KKMME+ ++ A+ 
Sbjct: 1  MADIAILVAEEYERRMKNPRQEQKAAAEVQDLVSGVSISATAS--RVKKMMELELELAQP 60

Query: 61 TEFKWVFEPKSQIGRAASTGFFSA 83
           EFKWVFEPKSQIGRAASTGFFSA
Sbjct: 61 NEFKWVFEPKSQIGRAASTGFFSA 82

BLAST of Csor.00g059520 vs. ExPASy TrEMBL
Match: A0A0A0KK75 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501230 PE=4 SV=1)

HSP 1 Score: 118 bits (296), Expect = 5.36e-33
Identity = 68/89 (76.40%), Postives = 78/89 (87.64%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPRQAQET--QKLEDL-SSGVSISATASAIRMKKMMEIAIQN- 60
          MADIAILVAEEYERR KNPR+ QE   Q+L++L SSGVSISATA++IRMKKMME+A ++ 
Sbjct: 1  MADIAILVAEEYERRTKNPRRGQEMIRQELQELGSSGVSISATATSIRMKKMMEMAKKHN 60

Query: 61 --AEMTEFKWVFEPKSQIGRAASTGFFSA 83
            AEM+EF WVFEPKSQIGRAASTGFFSA
Sbjct: 61 YSAEMSEFNWVFEPKSQIGRAASTGFFSA 89

BLAST of Csor.00g059520 vs. ExPASy TrEMBL
Match: A0A6J1KS29 (uncharacterized protein LOC111497122 OS=Cucurbita maxima OX=3661 GN=LOC111497122 PE=4 SV=1)

HSP 1 Score: 117 bits (292), Expect = 1.79e-32
Identity = 64/84 (76.19%), Postives = 73/84 (86.90%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPRQAQETQ-KLEDLSSGVSISATASAIRMKKMMEIAIQNAEM 60
          MADIAILVAEEYERRMKNPRQ ++   +++DL SGVSISATAS  R+KKMME+ ++ AE 
Sbjct: 1  MADIAILVAEEYERRMKNPRQEEKAAAEVQDLVSGVSISATAS--RVKKMMELELELAER 60

Query: 61 TEFKWVFEPKSQIGRAASTGFFSA 83
           EFKWVFEPKSQIGRAASTGFFSA
Sbjct: 61 NEFKWVFEPKSQIGRAASTGFFSA 82

BLAST of Csor.00g059520 vs. ExPASy TrEMBL
Match: A0A6J1HEA8 (uncharacterized protein LOC111463202 OS=Cucurbita moschata OX=3662 GN=LOC111463202 PE=4 SV=1)

HSP 1 Score: 116 bits (291), Expect = 2.54e-32
Identity = 64/84 (76.19%), Postives = 73/84 (86.90%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPRQAQETQ-KLEDLSSGVSISATASAIRMKKMMEIAIQNAEM 60
          MADIAILVAEEYERRMKNPRQ Q+   +++DL SGVSISATAS  R+KKMME+ ++ A+ 
Sbjct: 1  MADIAILVAEEYERRMKNPRQEQKAAAEVQDLVSGVSISATAS--RVKKMMELELELAQP 60

Query: 61 TEFKWVFEPKSQIGRAASTGFFSA 83
           EFKWVFEPKSQIGRAASTGFFSA
Sbjct: 61 NEFKWVFEPKSQIGRAASTGFFSA 82

BLAST of Csor.00g059520 vs. ExPASy TrEMBL
Match: A0A5A7T3Y6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002530 PE=4 SV=1)

HSP 1 Score: 113 bits (282), Expect = 7.10e-31
Identity = 65/88 (73.86%), Postives = 75/88 (85.23%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPRQAQET--QKLEDLSSGVSISATASAIRMKKMMEIAIQN-- 60
          MADIAILVAEEYERR K+PR+ QE   Q+L+DL SGVSISATA++I MKKMME+A +N  
Sbjct: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRNNY 60

Query: 61 -AEMTEFKWVFEPKSQIGRAASTGFFSA 83
           AE++EF  VFEPKSQIGRAASTGFFSA
Sbjct: 61 SAEISEFNRVFEPKSQIGRAASTGFFSA 88

BLAST of Csor.00g059520 vs. ExPASy TrEMBL
Match: A0A1S4DTC5 (uncharacterized protein LOC103485003 OS=Cucumis melo OX=3656 GN=LOC103485003 PE=4 SV=1)

HSP 1 Score: 113 bits (282), Expect = 7.10e-31
Identity = 65/88 (73.86%), Postives = 75/88 (85.23%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPRQAQET--QKLEDLSSGVSISATASAIRMKKMMEIAIQN-- 60
          MADIAILVAEEYERR K+PR+ QE   Q+L+DL SGVSISATA++I MKKMME+A +N  
Sbjct: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGSGVSISATATSITMKKMMEMAKRNNY 60

Query: 61 -AEMTEFKWVFEPKSQIGRAASTGFFSA 83
           AE++EF  VFEPKSQIGRAASTGFFSA
Sbjct: 61 SAEISEFNRVFEPKSQIGRAASTGFFSA 88

BLAST of Csor.00g059520 vs. TAIR 10
Match: AT5G65207.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 7.3e-05
Identity = 33/83 (39.76%), Postives = 41/83 (49.40%), Query Frame = 0

Query: 1  MADIAILVAEEYERRMKNPRQAQETQKLEDLSSGVSISATASAIRMKKMMEIAIQNAEMT 60
          MADIAILVAEEYERRMK+      +  +E     +          +   M IA    ++ 
Sbjct: 1  MADIAILVAEEYERRMKHTTVGSRSSPVEFDWWKI----------IPAKMTIAFDKMKIE 60

Query: 61 EFKWVFEPKSQIGRAASTGFFSA 84
            K  FE KS+   A S GFFSA
Sbjct: 61 SLKKNFEAKSEFALAISHGFFSA 73

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6604012.11.27e-48100.00hypothetical protein SDJN03_04621, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_038882836.14.45e-4083.13uncharacterized protein LOC120073972 [Benincasa hispida][more]
XP_011657992.11.11e-3276.40uncharacterized protein LOC105435930 [Cucumis sativus] >KGN48782.1 hypothetical ... [more]
XP_023003555.13.69e-3276.19uncharacterized protein LOC111497122 [Cucurbita maxima][more]
XP_022962826.15.24e-3276.19uncharacterized protein LOC111463202 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
A0A0A0KK755.36e-3376.40Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501230 PE=4 SV=1[more]
A0A6J1KS291.79e-3276.19uncharacterized protein LOC111497122 OS=Cucurbita maxima OX=3661 GN=LOC111497122... [more]
A0A6J1HEA82.54e-3276.19uncharacterized protein LOC111463202 OS=Cucurbita moschata OX=3662 GN=LOC1114632... [more]
A0A5A7T3Y67.10e-3173.86Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S4DTC57.10e-3173.86uncharacterized protein LOC103485003 OS=Cucumis melo OX=3656 GN=LOC103485003 PE=... [more]
Match NameE-valueIdentityDescription
AT5G65207.17.3e-0539.76unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36067EXPRESSED PROTEINcoord: 1..83

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g059520.m01Csor.00g059520.m01mRNA