Csor.00g059520 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGATATTGCAATTCTTGTTGCAGAGGAATACGAGAGAAGGATGAAGAATCCAAGGCAAGCGCAGGAGACGCAAAAGCTTGAAGATTTGAGTTCTGGGGTTTCCATCTCTGCAACTGCTTCGGCGATTAGGATGAAGAAGATGATGGAAATAGCAATACAAAATGCTGAGATGACGGAATTCAAATGGGTTTTCGAACCCAAATCCCAAATTGGCCGAGCCGCTTCCACCGGATTCTTCTCCGCCTGA ATGGCGGATATTGCAATTCTTGTTGCAGAGGAATACGAGAGAAGGATGAAGAATCCAAGGCAAGCGCAGGAGACGCAAAAGCTTGAAGATTTGAGTTCTGGGGTTTCCATCTCTGCAACTGCTTCGGCGATTAGGATGAAGAAGATGATGGAAATAGCAATACAAAATGCTGAGATGACGGAATTCAAATGGGTTTTCGAACCCAAATCCCAAATTGGCCGAGCCGCTTCCACCGGATTCTTCTCCGCCTGA ATGGCGGATATTGCAATTCTTGTTGCAGAGGAATACGAGAGAAGGATGAAGAATCCAAGGCAAGCGCAGGAGACGCAAAAGCTTGAAGATTTGAGTTCTGGGGTTTCCATCTCTGCAACTGCTTCGGCGATTAGGATGAAGAAGATGATGGAAATAGCAATACAAAATGCTGAGATGACGGAATTCAAATGGGTTTTCGAACCCAAATCCCAAATTGGCCGAGCCGCTTCCACCGGATTCTTCTCCGCCTGA MADIAILVAEEYERRMKNPRQAQETQKLEDLSSGVSISATASAIRMKKMMEIAIQNAEMTEFKWVFEPKSQIGRAASTGFFSA Homology
BLAST of Csor.00g059520 vs. NCBI nr
Match: KAG6604012.1 (hypothetical protein SDJN03_04621, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034176.1 hypothetical protein SDJN02_03903, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 158 bits (400), Expect = 1.27e-48 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of Csor.00g059520 vs. NCBI nr
Match: XP_038882836.1 (uncharacterized protein LOC120073972 [Benincasa hispida]) HSP 1 Score: 137 bits (344), Expect = 4.45e-40 Identity = 69/83 (83.13%), Postives = 79/83 (95.18%), Query Frame = 0
BLAST of Csor.00g059520 vs. NCBI nr
Match: XP_011657992.1 (uncharacterized protein LOC105435930 [Cucumis sativus] >KGN48782.1 hypothetical protein Csa_003490 [Cucumis sativus]) HSP 1 Score: 118 bits (296), Expect = 1.11e-32 Identity = 68/89 (76.40%), Postives = 78/89 (87.64%), Query Frame = 0
BLAST of Csor.00g059520 vs. NCBI nr
Match: XP_023003555.1 (uncharacterized protein LOC111497122 [Cucurbita maxima]) HSP 1 Score: 117 bits (292), Expect = 3.69e-32 Identity = 64/84 (76.19%), Postives = 73/84 (86.90%), Query Frame = 0
BLAST of Csor.00g059520 vs. NCBI nr
Match: XP_022962826.1 (uncharacterized protein LOC111463202 [Cucurbita moschata]) HSP 1 Score: 116 bits (291), Expect = 5.24e-32 Identity = 64/84 (76.19%), Postives = 73/84 (86.90%), Query Frame = 0
BLAST of Csor.00g059520 vs. ExPASy TrEMBL
Match: A0A0A0KK75 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501230 PE=4 SV=1) HSP 1 Score: 118 bits (296), Expect = 5.36e-33 Identity = 68/89 (76.40%), Postives = 78/89 (87.64%), Query Frame = 0
BLAST of Csor.00g059520 vs. ExPASy TrEMBL
Match: A0A6J1KS29 (uncharacterized protein LOC111497122 OS=Cucurbita maxima OX=3661 GN=LOC111497122 PE=4 SV=1) HSP 1 Score: 117 bits (292), Expect = 1.79e-32 Identity = 64/84 (76.19%), Postives = 73/84 (86.90%), Query Frame = 0
BLAST of Csor.00g059520 vs. ExPASy TrEMBL
Match: A0A6J1HEA8 (uncharacterized protein LOC111463202 OS=Cucurbita moschata OX=3662 GN=LOC111463202 PE=4 SV=1) HSP 1 Score: 116 bits (291), Expect = 2.54e-32 Identity = 64/84 (76.19%), Postives = 73/84 (86.90%), Query Frame = 0
BLAST of Csor.00g059520 vs. ExPASy TrEMBL
Match: A0A5A7T3Y6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002530 PE=4 SV=1) HSP 1 Score: 113 bits (282), Expect = 7.10e-31 Identity = 65/88 (73.86%), Postives = 75/88 (85.23%), Query Frame = 0
BLAST of Csor.00g059520 vs. ExPASy TrEMBL
Match: A0A1S4DTC5 (uncharacterized protein LOC103485003 OS=Cucumis melo OX=3656 GN=LOC103485003 PE=4 SV=1) HSP 1 Score: 113 bits (282), Expect = 7.10e-31 Identity = 65/88 (73.86%), Postives = 75/88 (85.23%), Query Frame = 0
BLAST of Csor.00g059520 vs. TAIR 10
Match: AT5G65207.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 43.9 bits (102), Expect = 7.3e-05 Identity = 33/83 (39.76%), Postives = 41/83 (49.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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