Csor.00g059150 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g059150
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RING-type E3 ubiquitin transferase
Location	Csor_Chr03: 6765994 .. 6767875 (+)
RNA-Seq Expression	Csor.00g059150
Synteny	Csor.00g059150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCTGCCACCGGGCTTGTCTTGGGTCCCGATACCATTTTAAATTTTGTTATACACTCTGTACTCCTAACTGTTCCCTTCTATGTTCTCCAAAGCCACCGCCGCCGCATCTGCCTTTGCTTCCGTCTTCCGGTAACCCACCCCGCCCCCATCCCTCGGGAAAGACTCTACTTCTTCTCAGTTTGATCTCCACAGCTACTTTAGTCGTCGCCATCTTCATGGTTTGTCTTCTTGTCAAGAAATTGAAGGAGTATCGTAACTCCAGACAGAATGGGCCGCCTCTGTTCGATGTCCACAGAGAGAATCTCCCCGATGACGATGAAGAAGAAGGACCCGTCCTTGACCACCACGTATGGTACATCAACACCGTCGGTCTCCAGCAATCGATTATCGATTCAATCACCATGTTCAAGTACAGGAAGGACGAGAAACTAATCGAAGGATCAGACTGCTCGATCTGCCTCGGGGAGTTTCAAGACGACGAGAGCCTTCGACTGTTGCCTAAATGCAGCCACGCCTTCCATGTTCCCTGCATCGACACGTGGCTGAGATCGCACAAAAACTGCCCCCTTTGTCGTGCTCCAGTGCTGTCCAACTCCACCGCCCCTAATTTAGTCCCCATCGAACCGATCAGAAACCAGCCGCCGGCGATCGAAGATACCCAAATGGAAACAGAGGCCGTCGAGGAAGAAAACAGAGGAAATGAAAACAGTGGAGAAGGGGGTAGCAATATTGGAGGGAATTCTGAAATTCCCATCAAAGGGCTGTCTCGTACTTTGAGTGATTTGACTGAGAATCAAATTCGCGAGGCTGTGGAAGACGAAGGACAAGCGATAAGAAGGTCGGTTTCTATGGATTCAGTTTCTGCAATGGCGATTTATCAGGCGACGGCCAAAATACAAATTCCAGAAGAAGGTTCTTCTTCAAGTGGGGCGTTAGTGGAAGTGAATAATTCAGTCTCTTCGAGGAATCTTCCCTTTCCAAAGCGGGGAGTCGGAAATCAGAGCTTGTATAATCTCGTGAAGAGCATTCCATTTGGGCGTTCTGTGCAAAAGGGTGGGATCTCGATGAAAATGTTAAGTTCGGGTAGAAGGAAGATACATTGGGCCAGACATTACAGAAGCCAGAGCTCGGTCCTTCCGATGTGAGAAATAAAGAAATCTTAATGTCTGCGGAAGTCACAATCTTTTCTGTACAGTTCCAAGAAGCTGCCCTGCTCCTACACGTGTATGATAAGGTGTTCAAGCTGCTGCAACTCTGGTCTGTTCTGTTGGGGGTTTTTTTAAAAGGTAATATACGAATAGAATAAATAAAGAAGAAGATGGGCTTATTTATTTATCTCAATGCCTCGGCTTTTGTGACATTCCTAGTTATCTGCACATTCACAAACGAGGGCTGCTGATTTGAATTATGGATGATAAAAGTTAGTTTTAGAAGTAAAAATGTATTTTTGGCTACACTACACTACATTATTGTACGGGGAAGATCTCTACTTGACGTGAGCTGCACGCTAGTATGGAGTTTTATTCTCTACAAACTCATATGCAATAAACTAGTTCGAAGATGAATATGGTATTAGATGATTTTCTTACTGATTCCATTCCTGTTTGGCGCTTTTATGCCACTTGGTGACTTGAACGCTCATCCTTGGTAGGCCGTGTGGCCAGTCTCGTCTTATTAGTGAATCATGATTTAGTAACCATGTTCGATCCCACATGATAAATCTGAATTATTGTCTGCTAAAGTTGAGTTTGATCATTTGGGGGAAGGGTTGATGGTTCGGATCTTGGATTGGTGGTGGACGATATCCTTTACCTCACTTCCCACCTTCCTTCGTCGGCTTTGCTGCTCTGCATTGTCGGTGACATCCAAATCTTTTAG

mRNA sequence

ATGCCCTGCCACCGGGCTTGTCTTGGGTCCCGATACCATTTTAAATTTTGTTATACACTCTGTACTCCTAACTGTTCCCTTCTATGTTCTCCAAAGCCACCGCCGCCGCATCTGCCTTTGCTTCCGTCTTCCGGTAACCCACCCCGCCCCCATCCCTCGGGAAAGACTCTACTTCTTCTCAGTTTGATCTCCACAGCTACTTTAGTCGTCGCCATCTTCATGGTTTGTCTTCTTGTCAAGAAATTGAAGGAGTATCGTAACTCCAGACAGAATGGGCCGCCTCTGTTCGATGTCCACAGAGAGAATCTCCCCGATGACGATGAAGAAGAAGGACCCGTCCTTGACCACCACGTATGGTACATCAACACCGTCGGTCTCCAGCAATCGATTATCGATTCAATCACCATGTTCAAGTACAGGAAGGACGAGAAACTAATCGAAGGATCAGACTGCTCGATCTGCCTCGGGGAGTTTCAAGACGACGAGAGCCTTCGACTGTTGCCTAAATGCAGCCACGCCTTCCATGTTCCCTGCATCGACACGTGGCTGAGATCGCACAAAAACTGCCCCCTTTGTCGTGCTCCAGTGCTGTCCAACTCCACCGCCCCTAATTTAGTCCCCATCGAACCGATCAGAAACCAGCCGCCGGCGATCGAAGATACCCAAATGGAAACAGAGGCCGTCGAGGAAGAAAACAGAGGAAATGAAAACAGTGGAGAAGGGGGTAGCAATATTGGAGGGAATTCTGAAATTCCCATCAAAGGGCTGTCTCGTACTTTGAGTGATTTGACTGAGAATCAAATTCGCGAGGCTGTGGAAGACGAAGGACAAGCGATAAGAAGGTCGGTTTCTATGGATTCAGTTTCTGCAATGGCGATTTATCAGGCGACGGCCAAAATACAAATTCCAGAAGAAGGTTCTTCTTCAAGTGGGGCGTTAGTGGAAGTGAATAATTCAGTCTCTTCGAGGAATCTTCCCTTTCCAAAGCGGGGAGTCGGAAATCAGAGCTTGTATAATCTCGTGAAGAGCATTCCATTTGGGCGTTCTGTGCAAAAGGGTGGGATCTCGATGAAAATGTTAAGTTCGGGTAGAAGGAAGATACATTGGGCCAGACATTACAGAAGCCAGAGCTCGGTCCTTCCGATGGTTGATGGTTCGGATCTTGGATTGGTGGTGGACGATATCCTTTACCTCACTTCCCACCTTCCTTCGTCGGCTTTGCTGCTCTGCATTGTCGGTGACATCCAAATCTTTTAG

Coding sequence (CDS)

ATGCCCTGCCACCGGGCTTGTCTTGGGTCCCGATACCATTTTAAATTTTGTTATACACTCTGTACTCCTAACTGTTCCCTTCTATGTTCTCCAAAGCCACCGCCGCCGCATCTGCCTTTGCTTCCGTCTTCCGGTAACCCACCCCGCCCCCATCCCTCGGGAAAGACTCTACTTCTTCTCAGTTTGATCTCCACAGCTACTTTAGTCGTCGCCATCTTCATGGTTTGTCTTCTTGTCAAGAAATTGAAGGAGTATCGTAACTCCAGACAGAATGGGCCGCCTCTGTTCGATGTCCACAGAGAGAATCTCCCCGATGACGATGAAGAAGAAGGACCCGTCCTTGACCACCACGTATGGTACATCAACACCGTCGGTCTCCAGCAATCGATTATCGATTCAATCACCATGTTCAAGTACAGGAAGGACGAGAAACTAATCGAAGGATCAGACTGCTCGATCTGCCTCGGGGAGTTTCAAGACGACGAGAGCCTTCGACTGTTGCCTAAATGCAGCCACGCCTTCCATGTTCCCTGCATCGACACGTGGCTGAGATCGCACAAAAACTGCCCCCTTTGTCGTGCTCCAGTGCTGTCCAACTCCACCGCCCCTAATTTAGTCCCCATCGAACCGATCAGAAACCAGCCGCCGGCGATCGAAGATACCCAAATGGAAACAGAGGCCGTCGAGGAAGAAAACAGAGGAAATGAAAACAGTGGAGAAGGGGGTAGCAATATTGGAGGGAATTCTGAAATTCCCATCAAAGGGCTGTCTCGTACTTTGAGTGATTTGACTGAGAATCAAATTCGCGAGGCTGTGGAAGACGAAGGACAAGCGATAAGAAGGTCGGTTTCTATGGATTCAGTTTCTGCAATGGCGATTTATCAGGCGACGGCCAAAATACAAATTCCAGAAGAAGGTTCTTCTTCAAGTGGGGCGTTAGTGGAAGTGAATAATTCAGTCTCTTCGAGGAATCTTCCCTTTCCAAAGCGGGGAGTCGGAAATCAGAGCTTGTATAATCTCGTGAAGAGCATTCCATTTGGGCGTTCTGTGCAAAAGGGTGGGATCTCGATGAAAATGTTAAGTTCGGGTAGAAGGAAGATACATTGGGCCAGACATTACAGAAGCCAGAGCTCGGTCCTTCCGATGGTTGATGGTTCGGATCTTGGATTGGTGGTGGACGATATCCTTTACCTCACTTCCCACCTTCCTTCGTCGGCTTTGCTGCTCTGCATTGTCGGTGACATCCAAATCTTTTAG

Protein sequence

MPCHRACLGSRYHFKFCYTLCTPNCSLLCSPKPPPPHLPLLPSSGNPPRPHPSGKTLLLLSLISTATLVVAIFMVCLLVKKLKEYRNSRQNGPPLFDVHRENLPDDDEEEGPVLDHHVWYINTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSTAPNLVPIEPIRNQPPAIEDTQMETEAVEEENRGNENSGEGGSNIGGNSEIPIKGLSRTLSDLTENQIREAVEDEGQAIRRSVSMDSVSAMAIYQATAKIQIPEEGSSSSGALVEVNNSVSSRNLPFPKRGVGNQSLYNLVKSIPFGRSVQKGGISMKMLSSGRRKIHWARHYRSQSSVLPMVDGSDLGLVVDDILYLTSHLPSSALLLCIVGDIQIF

Homology

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BLAST of Csor.00g059150 vs. ExPASy Swiss-Prot
Match: Q9LX93 (E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 8.2e-33
Identity = 92/237 (38.82%), Postives = 125/237 (52.74%), Query Frame = 0


Query: 4   HRACLGSRYHFK---FCYTLCTPNCSLLCSPKPPPPHLPLLPSSGNPPRPHPSGKTLLLL 63
           HR  L S   FK   FC+    P       P PPPP          PPR       LL  
Sbjct: 5   HRKMLLSCLQFKDLRFCFRQYPP-------PPPPPP----------PPR---ELSLLLPT 64

Query: 64  SLISTATLVVAIFMVCLLVKKLKEYRNSRQNGPPLFDVHRENLPDDDEEEGPVLDHHVWY 123
           S+    ++++ +F+V  L   + + R          D +++   D+ EE      HHVW 
Sbjct: 65  SICVVGSIILFLFLVFFLYLHITQQRRISAASVTPGDTNQQEDEDETEERDFSDFHHVWQ 124

Query: 124 INTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCID 183
           I TVGL +S I+SIT+  ++K E +I+G++CS+CL EF++DESLRLLPKCSHAFH+ CID
Sbjct: 125 IPTVGLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNCID 184

Query: 184 TWLRSHKNCPLCRAPVLSNSTAPNLVPIEPIRNQPPAIEDTQMETEAVEEENRGNEN 238
           TWL SHKNCPLCRAPVL  +  P+        +QP +     +        +R N N
Sbjct: 185 TWLLSHKNCPLCRAPVLLITEPPH--QETETNHQPDSESSNDLRGRQDSSRSRRNHN 219

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BLAST of Csor.00g059150 vs. ExPASy Swiss-Prot
Match: Q8LFY8 (RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2)

HSP 1 Score: 139.0 bits (349), Expect = 1.2e-31
Identity = 98/257 (38.13%), Postives = 139/257 (54.09%), Query Frame = 0


Query: 20  LCTPNCSLLCSPKPP----PPHLPLLPSSGNP-PRPHPSGKTLLL--------LSLISTA 79
           +C P C   C P+P      P LP   SS  P P P PS   + L        L  IS  
Sbjct: 27  VCDPICPYNCYPEPDYYTISPQLPPWSSSPQPSPCPSPSISAVYLPSQDSSSSLDAISII 86

Query: 80  TLVVAIFMVCL----LVKKLKEYRNSRQNGPPLFDVHREN--LPDDDEEEGPVLDHHVWY 139
           T+  A+  + L    LV K      +R N       + +N  + +++ ++   +DH +W 
Sbjct: 87  TITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVMEEEFQDREQVDHPIWL 146

Query: 140 INTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCID 199
           I T GLQQSII+SIT+  Y++ + LIE +DC +CL EF++DESLRLLPKC+HAFH+ CID
Sbjct: 147 IRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAFHISCID 206

Query: 200 TWLRSHKNCPLCRAPV--LSNSTAPNLVPIEPIRNQPPAIEDTQMETEAVEEENRGN-EN 255
           TWL SH NCPLCRA +  +S +T     P+E      P    + +E + V+EE+ G  EN
Sbjct: 207 TWLSSHTNCPLCRAGIAMISVTTPRYSGPVE----VTPGGSGSHLENDGVDEEDHGEIEN 266

[Close]

BLAST of Csor.00g059150 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.3e-25
Identity = 123/383 (32.11%), Postives = 186/383 (48.56%), Query Frame = 0


Query: 17  CYTLCTPNCSLLCSPKPPPPHLPLLPSSGNPPRPHPSGKTLLLLSLISTATLVVAIFMVC 76
           C   C   C L+  P PP   L    SS +      S  + LL++LI   T  + +    
Sbjct: 22  CNIYCPQWCYLIFPPPPPSFFLDDDSSSSS------SSFSPLLIALIGILTSALILVSYY 81

Query: 77  LLVKKLKEYRNSRQNGPPLFDVHRENLPDDDEEEGPVLDHHVWYINTVGLQQSIIDSITM 136
            L+ K     +   +         E L  +   EG          N  GL +S+I SIT+
Sbjct: 82  TLISKYCHRHHQTSSS--------ETLNLNHNGEGFFSSTQRISTNGDGLNESMIKSITV 141

Query: 137 FKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPV 196
           +KY+  +  ++GSDCS+CL EF+++ESLRLLPKC+HAFH+PCIDTWL+SH NCPLCRA V
Sbjct: 142 YKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFV 201

Query: 197 --LSNSTA---PNLVPIEPIRNQPPAIEDTQMETEAVEEENRGNENSGEGGSNIGG-NSE 256
             ++N TA    N+  +  + NQ  +   T   +E        N N     S  G  +S 
Sbjct: 202 TGVNNPTASVGQNVSVV--VANQSNSAHQTGSVSEI-------NLNLAGYESQTGDFDSV 261

Query: 257 IPIKGL---SRTLSDLTENQI----REAVEDEGQAIRRSVSMDSVSAMAIYQATAKIQIP 316
           + I+ L   SR     +E Q+    RE  +++   IRRSVS++S   ++I     +I+  
Sbjct: 262 VVIEDLEIGSRNSDARSELQLPEERRETKDEDSLPIRRSVSLNSGVVVSIADVLREIE-D 321

Query: 317 EEGSSSSGALVEVNNSVSSRNLPFPKRGVGNQSLYNLVKSIPFGRSVQK-GGIS---MKM 376
           EEG S            +S+     + G G        K+IP   + Q+ GG+S   ++ 
Sbjct: 322 EEGESGGVG--------TSQRREEGEDGDG--------KTIPPTEANQRSGGVSGFFVRS 362

Query: 377 LSSGRRKIHWARHYRSQSSVLPM 383
           LS+GR    ++R+ R ++  LP+
Sbjct: 382 LSTGR--FIFSRYDRGRNYRLPL 362

[Close]

BLAST of Csor.00g059150 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 2.4e-24
Identity = 83/241 (34.44%), Postives = 127/241 (52.70%), Query Frame = 0


Query: 20  LCTPNCSLLCSPKPPPPHLPLLPSSGNPPRPHPSGKTLLLLSLISTATLVVAIFMVCLLV 79
           +C+  C   C    PPP    L    +      S   + L+ ++++A ++V+ +    L+
Sbjct: 24  VCSVYCPQWCYVIFPPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYY---TLI 83

Query: 80  KKLKEYRNSRQNGPPLFDVHRENLPDDDEEEGPVLDHHVWYIN---TV------GLQQSI 139
            K    R    +      ++R  +  D   +G   +++    N   T+      GL +S+
Sbjct: 84  SKYCHRRRHNSSSTSAAAINR--ISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESL 143

Query: 140 IDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCIDTWLRSHKNCP 199
           I SIT++KYRK +  +E SDCS+CL EFQ++ESLRLLPKC+HAFHVPCIDTWL+SH NCP
Sbjct: 144 IKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCP 203

Query: 200 LCRAPVLSNSTAPNLVPIEPIRNQPPAIEDTQMET--EAVEEENRGNENSGEGGSNIGGN 250
           LCRA ++++S     V I  + NQ    E+  + T  ++V   N   ENS      +   
Sbjct: 204 LCRAFIVTSSA----VEIVDLTNQQIVTENNSISTGDDSVVVVNLDLENSRSRNETVNEG 255

[Close]

BLAST of Csor.00g059150 vs. ExPASy Swiss-Prot
Match: P0C041 (Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 PE=3 SV=2)

HSP 1 Score: 110.2 bits (274), Expect = 5.9e-23
Identity = 71/193 (36.79%), Postives = 97/193 (50.26%), Query Frame = 0


Query: 17  CYTLCTPNCSLLCSPKPPPPHLPLLPSSGNPPRPHPSGKTLLLLSLISTATLVVAIFMVC 76
           C T C   C+ + +  PPP       + G    P+ S   + +  + +TA L+ A +   
Sbjct: 24  CSTFCPQWCTYI-NFSPPPISYEQFLNDGVASNPNLSPLVIAIFGIFATAFLLAAYY--- 83

Query: 77  LLVKK------LKEYRNSRQNGPPLFDVHRENLPDDDEEEGPVLDHHVWYINTVGLQQSI 136
            LV K        E  +       + DV+     D D       D      +T GL  ++
Sbjct: 84  TLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQD-------DPFALESSTAGLDDTL 143

Query: 137 IDSITMFKYRKDEK--LIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCIDTWLRSHKN 196
           I  I  FK +K +    I G+DCSICLGEF +DESLRLLPKC+H FHV CID WL+SH N
Sbjct: 144 IKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSN 203

Query: 197 CPLCRAPVLSNST 202
           CPLCRA ++  +T
Sbjct: 204 CPLCRAKIIVPTT 205

[Close]

BLAST of Csor.00g059150 vs. NCBI nr
Match: KAG6604048.1 (RING-H2 finger protein ATL54, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 826 bits (2134), Expect = 7.18e-302
Identity = 418/418 (100.00%), Postives = 418/418 (100.00%), Query Frame = 0


Query: 1   MPCHRACLGSRYHFKFCYTLCTPNCSLLCSPKPPPPHLPLLPSSGNPPRPHPSGKTLLLL 60
           MPCHRACLGSRYHFKFCYTLCTPNCSLLCSPKPPPPHLPLLPSSGNPPRPHPSGKTLLLL
Sbjct: 1   MPCHRACLGSRYHFKFCYTLCTPNCSLLCSPKPPPPHLPLLPSSGNPPRPHPSGKTLLLL 60

Query: 61  SLISTATLVVAIFMVCLLVKKLKEYRNSRQNGPPLFDVHRENLPDDDEEEGPVLDHHVWY 120
           SLISTATLVVAIFMVCLLVKKLKEYRNSRQNGPPLFDVHRENLPDDDEEEGPVLDHHVWY
Sbjct: 61  SLISTATLVVAIFMVCLLVKKLKEYRNSRQNGPPLFDVHRENLPDDDEEEGPVLDHHVWY 120

Query: 121 INTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCID 180
           INTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCID
Sbjct: 121 INTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCID 180

Query: 181 TWLRSHKNCPLCRAPVLSNSTAPNLVPIEPIRNQPPAIEDTQMETEAVEEENRGNENSGE 240
           TWLRSHKNCPLCRAPVLSNSTAPNLVPIEPIRNQPPAIEDTQMETEAVEEENRGNENSGE
Sbjct: 181 TWLRSHKNCPLCRAPVLSNSTAPNLVPIEPIRNQPPAIEDTQMETEAVEEENRGNENSGE 240

Query: 241 GGSNIGGNSEIPIKGLSRTLSDLTENQIREAVEDEGQAIRRSVSMDSVSAMAIYQATAKI 300
           GGSNIGGNSEIPIKGLSRTLSDLTENQIREAVEDEGQAIRRSVSMDSVSAMAIYQATAKI
Sbjct: 241 GGSNIGGNSEIPIKGLSRTLSDLTENQIREAVEDEGQAIRRSVSMDSVSAMAIYQATAKI 300

Query: 301 QIPEEGSSSSGALVEVNNSVSSRNLPFPKRGVGNQSLYNLVKSIPFGRSVQKGGISMKML 360
           QIPEEGSSSSGALVEVNNSVSSRNLPFPKRGVGNQSLYNLVKSIPFGRSVQKGGISMKML
Sbjct: 301 QIPEEGSSSSGALVEVNNSVSSRNLPFPKRGVGNQSLYNLVKSIPFGRSVQKGGISMKML 360

Query: 361 SSGRRKIHWARHYRSQSSVLPMVDGSDLGLVVDDILYLTSHLPSSALLLCIVGDIQIF 418
           SSGRRKIHWARHYRSQSSVLPMVDGSDLGLVVDDILYLTSHLPSSALLLCIVGDIQIF
Sbjct: 361 SSGRRKIHWARHYRSQSSVLPMVDGSDLGLVVDDILYLTSHLPSSALLLCIVGDIQIF 418

[Close]

BLAST of Csor.00g059150 vs. NCBI nr
Match: KAG7034214.1 (RING-H2 finger protein ATL54, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 759 bits (1959), Expect = 1.58e-275
Identity = 384/394 (97.46%), Postives = 388/394 (98.48%), Query Frame = 0


Query: 1   MPCHRACLGSRYHFKFCYTLCTPNCSLLCSPKPPPPHLPLLPSSGNPPRPHPSGKTLLLL 60
           MPCHRACLGSRYHFKFCYTLCTPNCSLLCSPKPPPPHLPLLPSSGNPPRPHPSGKTLLLL
Sbjct: 1   MPCHRACLGSRYHFKFCYTLCTPNCSLLCSPKPPPPHLPLLPSSGNPPRPHPSGKTLLLL 60

Query: 61  SLISTATLVVAIFMVCLLVKKLKEYRNSRQNGPPLFDVHRENLPDDDEEEGPVLDHHVWY 120
           SLISTATLVVAIFMVCLLVKKLKEYRNSRQNGPPLFDVHRENLPDDDEEEGPVLDHHVWY
Sbjct: 61  SLISTATLVVAIFMVCLLVKKLKEYRNSRQNGPPLFDVHRENLPDDDEEEGPVLDHHVWY 120

Query: 121 INTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCID 180
           INTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCID
Sbjct: 121 INTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCID 180

Query: 181 TWLRSHKNCPLCRAPVLSNSTAPNLVPIEPIRNQPPAIEDTQMETEAVEEENRGNENSGE 240
           TWLRSHKNCPLCRAPVLSNSTAPNLVPIEPIRNQPPAIEDTQMETEAVEEENRGNENSGE
Sbjct: 181 TWLRSHKNCPLCRAPVLSNSTAPNLVPIEPIRNQPPAIEDTQMETEAVEEENRGNENSGE 240

Query: 241 GGSNIGGNSEIPIKGLSRTLSDLTENQIREAVEDEGQAIRRSVSMDSVSAMAIYQATAKI 300
           GGSNIGGNSEIPIKGLSRTLSDLTENQIREAVEDEGQAIRRSVSMDSVSAMAIYQATAKI
Sbjct: 241 GGSNIGGNSEIPIKGLSRTLSDLTENQIREAVEDEGQAIRRSVSMDSVSAMAIYQATAKI 300

Query: 301 QIPEEGSSSSGALVEVNNSVSSRNLPFPKRGVGNQSLYNLVKSIPFGRSVQKGGISMKML 360
           QIPEEGSSSSGALVEVNNSVSSRNLPFPKRGVGNQSLYNLVKSIPFGRSVQKGGISMKML
Sbjct: 301 QIPEEGSSSSGALVEVNNSVSSRNLPFPKRGVGNQSLYNLVKSIPFGRSVQKGGISMKML 360

Query: 361 SSGRRKIHWARHYRSQSSVLPMVDGSDLGLVVDD 394
           SSGRRKIHWARHYRSQSSVLP+    +L LV+ +
Sbjct: 361 SSGRRKIHWARHYRSQSSVLPI--SPNLNLVLSE 392

[Close]

BLAST of Csor.00g059150 vs. NCBI nr
Match: XP_023544216.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 744 bits (1920), Expect = 8.17e-270
Identity = 376/384 (97.92%), Postives = 378/384 (98.44%), Query Frame = 0


Query: 1   MPCHRACLGSRYHFKFCYTLCTPNCSLLCSPKPPPPHLPLLPSSGNPPRPHPSGKTLLLL 60
           MPCHRACLGSRYHFKFCYTLCTPNCSLLCSPKPPPPHLPLLPSSGNPPRPHPSGKTLLLL
Sbjct: 1   MPCHRACLGSRYHFKFCYTLCTPNCSLLCSPKPPPPHLPLLPSSGNPPRPHPSGKTLLLL 60

Query: 61  SLISTATLVVAIFMVCLLVKKLKEYRNSRQNGPPLFDVHRENLPDDD--EEEGPVLDHHV 120
           SLISTATLVVAIFMVCLLVKKLKEYRNSRQNGPPLFDVHRENLPDDD  EEEGPVLDHHV
Sbjct: 61  SLISTATLVVAIFMVCLLVKKLKEYRNSRQNGPPLFDVHRENLPDDDDDEEEGPVLDHHV 120

Query: 121 WYINTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPC 180
           WYINTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPC
Sbjct: 121 WYINTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPC 180

Query: 181 IDTWLRSHKNCPLCRAPVLSNSTAPNLVPIEPIRNQPPAIEDTQMETEAVEEENRGNENS 240
           IDTWLRSHKNCPLCRAPVLSNS APNLVPIEPIRNQPPAIEDTQMETEAVEEENRGNENS
Sbjct: 181 IDTWLRSHKNCPLCRAPVLSNSAAPNLVPIEPIRNQPPAIEDTQMETEAVEEENRGNENS 240

Query: 241 GEGGSNIGGNSEIPIKGLSRTLSDLTENQIREAVEDEGQAIRRSVSMDSVSAMAIYQATA 300
           GEGGSN GGNSEIPIKGLSRTLSDLTENQIREAV+DEGQAIRRSVSMDSVSAMAIYQATA
Sbjct: 241 GEGGSNSGGNSEIPIKGLSRTLSDLTENQIREAVQDEGQAIRRSVSMDSVSAMAIYQATA 300

Query: 301 KIQIPEEGSSSSGALVEVNNSVSSRNLPFPKRGVGNQSLYNLVKSIPFGRSVQKGGISMK 360
           KIQIPEEGSSSSGALVEV NSVSSRN+PFPKRGVGNQSLYNLVKSIPFGRSVQKGGISMK
Sbjct: 301 KIQIPEEGSSSSGALVEVKNSVSSRNVPFPKRGVGNQSLYNLVKSIPFGRSVQKGGISMK 360

Query: 361 MLSSGRRKIHWARHYRSQSSVLPM 382
           MLSS RRKIHWARHYRSQSSVLPM
Sbjct: 361 MLSSSRRKIHWARHYRSQSSVLPM 384

[Close]

BLAST of Csor.00g059150 vs. NCBI nr
Match: XP_022949771.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata])

HSP 1 Score: 741 bits (1914), Expect = 5.99e-269
Identity = 374/382 (97.91%), Postives = 377/382 (98.69%), Query Frame = 0


Query: 1   MPCHRACLGSRYHFKFCYTLCTPNCSLLCSPKPPPPHLPLLPSSGNPPRPHPSGKTLLLL 60
           MPCHRACLGSRYHFKFCYTLCTPNCSLLCSPKPPPPHLPLLPSSGNPPRPHPSGKTLLLL
Sbjct: 1   MPCHRACLGSRYHFKFCYTLCTPNCSLLCSPKPPPPHLPLLPSSGNPPRPHPSGKTLLLL 60

Query: 61  SLISTATLVVAIFMVCLLVKKLKEYRNSRQNGPPLFDVHRENLPDDDEEEGPVLDHHVWY 120
           SLISTATLVVAIFM+CLLVKKLKEYRNSRQNGPPLFDVHRENLPDDDEE GPVLDHHVWY
Sbjct: 61  SLISTATLVVAIFMLCLLVKKLKEYRNSRQNGPPLFDVHRENLPDDDEE-GPVLDHHVWY 120

Query: 121 INTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCID 180
           INTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCID
Sbjct: 121 INTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCID 180

Query: 181 TWLRSHKNCPLCRAPVLSNSTAPNLVPIEPIRNQPPAIEDTQMETEAVEEENRGNENSGE 240
           TWLRSHKNCPLCRAPVLSNS APNLVPIEPI NQPPAIEDTQMETEAVEEENRGNENSGE
Sbjct: 181 TWLRSHKNCPLCRAPVLSNSAAPNLVPIEPIGNQPPAIEDTQMETEAVEEENRGNENSGE 240

Query: 241 GGSNIGGNSEIPIKGLSRTLSDLTENQIREAVEDEGQAIRRSVSMDSVSAMAIYQATAKI 300
           GGSN GGNSEIPIKGLSRTLSDLTENQ+REAVEDEGQAIRRSVSMDSVSAMAIYQATAKI
Sbjct: 241 GGSNSGGNSEIPIKGLSRTLSDLTENQVREAVEDEGQAIRRSVSMDSVSAMAIYQATAKI 300

Query: 301 QIPEEGSSSSGALVEVNNSVSSRNLPFPKRGVGNQSLYNLVKSIPFGRSVQKGGISMKML 360
           QIPEEGSSSSGALVEV NSVSSRN+PFPKRGVGNQSLYNLVKSIPFGRSVQKGGISMKML
Sbjct: 301 QIPEEGSSSSGALVEVKNSVSSRNVPFPKRGVGNQSLYNLVKSIPFGRSVQKGGISMKML 360

Query: 361 SSGRRKIHWARHYRSQSSVLPM 382
           SSGRRKIHWARHYRSQSSVLPM
Sbjct: 361 SSGRRKIHWARHYRSQSSVLPM 381

[Close]

BLAST of Csor.00g059150 vs. NCBI nr
Match: XP_022978507.1 (RING-H2 finger protein ATL54-like [Cucurbita maxima])

HSP 1 Score: 715 bits (1846), Expect = 1.38e-258
Identity = 365/382 (95.55%), Postives = 369/382 (96.60%), Query Frame = 0


Query: 1   MPCHRACLGSRYHFKFCYTLCTPNCSLLCSPKPPPPHLPLLPSSGNPPRPHPSGKTLLLL 60
           MPCHRACLGSRYHFKFCYTLCTPNCSLLCSPK  PPHLPLLPSSGNPPRPHPSGKTLLLL
Sbjct: 1   MPCHRACLGSRYHFKFCYTLCTPNCSLLCSPKSLPPHLPLLPSSGNPPRPHPSGKTLLLL 60

Query: 61  SLISTATLVVAIFMVCLLVKKLKEYRNSRQNGPPLFDVHRENLPDDDEEEGPVLDHHVWY 120
           SLISTAT +VAIFMVCLLVKKLKEYRNSRQNGPPLFDVHRENLPD+DEE  PVLDHHVWY
Sbjct: 61  SLISTATFIVAIFMVCLLVKKLKEYRNSRQNGPPLFDVHRENLPDEDEE-APVLDHHVWY 120

Query: 121 INTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCID 180
           INTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCID
Sbjct: 121 INTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCID 180

Query: 181 TWLRSHKNCPLCRAPVLSNSTAPNLVPIEPIRNQPPAIEDTQMETEAVEEENRGNENSGE 240
           TWLRSHKNCPLCRAPVLSNS APNLVP EPIRNQPPAIE TQMETEAVEEENRG+ NSGE
Sbjct: 181 TWLRSHKNCPLCRAPVLSNSAAPNLVPTEPIRNQPPAIEVTQMETEAVEEENRGDANSGE 240

Query: 241 GGSNIGGNSEIPIKGLSRTLSDLTENQIREAVEDEGQAIRRSVSMDSVSAMAIYQATAKI 300
           GGSN GGNSEIPIKGLS TLSDLTENQIREAVEDEGQAIRRSVSMDSVSAMAIYQATAKI
Sbjct: 241 GGSNSGGNSEIPIKGLSLTLSDLTENQIREAVEDEGQAIRRSVSMDSVSAMAIYQATAKI 300

Query: 301 QIPEEGSSSSGALVEVNNSVSSRNLPFPKRGVGNQSLYNLVKSIPFGRSVQKGGISMKML 360
           QIPEEGSSSSGALVEV NSVSSRN+PFPKRGVGNQSLYNLVKSIPFGRSVQKGGISMKML
Sbjct: 301 QIPEEGSSSSGALVEVKNSVSSRNVPFPKRGVGNQSLYNLVKSIPFGRSVQKGGISMKML 360

Query: 361 SSGRRKIHWARHYRSQSSVLPM 382
           SSGRRKIH ARHYRSQSSVLPM
Sbjct: 361 SSGRRKIHSARHYRSQSSVLPM 381

[Close]

BLAST of Csor.00g059150 vs. ExPASy TrEMBL
Match: A0A6J1GCY1 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111453059 PE=3 SV=1)

HSP 1 Score: 741 bits (1914), Expect = 2.90e-269
Identity = 374/382 (97.91%), Postives = 377/382 (98.69%), Query Frame = 0


Query: 1   MPCHRACLGSRYHFKFCYTLCTPNCSLLCSPKPPPPHLPLLPSSGNPPRPHPSGKTLLLL 60
           MPCHRACLGSRYHFKFCYTLCTPNCSLLCSPKPPPPHLPLLPSSGNPPRPHPSGKTLLLL
Sbjct: 1   MPCHRACLGSRYHFKFCYTLCTPNCSLLCSPKPPPPHLPLLPSSGNPPRPHPSGKTLLLL 60

Query: 61  SLISTATLVVAIFMVCLLVKKLKEYRNSRQNGPPLFDVHRENLPDDDEEEGPVLDHHVWY 120
           SLISTATLVVAIFM+CLLVKKLKEYRNSRQNGPPLFDVHRENLPDDDEE GPVLDHHVWY
Sbjct: 61  SLISTATLVVAIFMLCLLVKKLKEYRNSRQNGPPLFDVHRENLPDDDEE-GPVLDHHVWY 120

Query: 121 INTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCID 180
           INTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCID
Sbjct: 121 INTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCID 180

Query: 181 TWLRSHKNCPLCRAPVLSNSTAPNLVPIEPIRNQPPAIEDTQMETEAVEEENRGNENSGE 240
           TWLRSHKNCPLCRAPVLSNS APNLVPIEPI NQPPAIEDTQMETEAVEEENRGNENSGE
Sbjct: 181 TWLRSHKNCPLCRAPVLSNSAAPNLVPIEPIGNQPPAIEDTQMETEAVEEENRGNENSGE 240

Query: 241 GGSNIGGNSEIPIKGLSRTLSDLTENQIREAVEDEGQAIRRSVSMDSVSAMAIYQATAKI 300
           GGSN GGNSEIPIKGLSRTLSDLTENQ+REAVEDEGQAIRRSVSMDSVSAMAIYQATAKI
Sbjct: 241 GGSNSGGNSEIPIKGLSRTLSDLTENQVREAVEDEGQAIRRSVSMDSVSAMAIYQATAKI 300

Query: 301 QIPEEGSSSSGALVEVNNSVSSRNLPFPKRGVGNQSLYNLVKSIPFGRSVQKGGISMKML 360
           QIPEEGSSSSGALVEV NSVSSRN+PFPKRGVGNQSLYNLVKSIPFGRSVQKGGISMKML
Sbjct: 301 QIPEEGSSSSGALVEVKNSVSSRNVPFPKRGVGNQSLYNLVKSIPFGRSVQKGGISMKML 360

Query: 361 SSGRRKIHWARHYRSQSSVLPM 382
           SSGRRKIHWARHYRSQSSVLPM
Sbjct: 361 SSGRRKIHWARHYRSQSSVLPM 381

[Close]

BLAST of Csor.00g059150 vs. ExPASy TrEMBL
Match: A0A6J1IL98 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111478464 PE=3 SV=1)

HSP 1 Score: 715 bits (1846), Expect = 6.66e-259
Identity = 365/382 (95.55%), Postives = 369/382 (96.60%), Query Frame = 0


Query: 1   MPCHRACLGSRYHFKFCYTLCTPNCSLLCSPKPPPPHLPLLPSSGNPPRPHPSGKTLLLL 60
           MPCHRACLGSRYHFKFCYTLCTPNCSLLCSPK  PPHLPLLPSSGNPPRPHPSGKTLLLL
Sbjct: 1   MPCHRACLGSRYHFKFCYTLCTPNCSLLCSPKSLPPHLPLLPSSGNPPRPHPSGKTLLLL 60

Query: 61  SLISTATLVVAIFMVCLLVKKLKEYRNSRQNGPPLFDVHRENLPDDDEEEGPVLDHHVWY 120
           SLISTAT +VAIFMVCLLVKKLKEYRNSRQNGPPLFDVHRENLPD+DEE  PVLDHHVWY
Sbjct: 61  SLISTATFIVAIFMVCLLVKKLKEYRNSRQNGPPLFDVHRENLPDEDEE-APVLDHHVWY 120

Query: 121 INTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCID 180
           INTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCID
Sbjct: 121 INTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCID 180

Query: 181 TWLRSHKNCPLCRAPVLSNSTAPNLVPIEPIRNQPPAIEDTQMETEAVEEENRGNENSGE 240
           TWLRSHKNCPLCRAPVLSNS APNLVP EPIRNQPPAIE TQMETEAVEEENRG+ NSGE
Sbjct: 181 TWLRSHKNCPLCRAPVLSNSAAPNLVPTEPIRNQPPAIEVTQMETEAVEEENRGDANSGE 240

Query: 241 GGSNIGGNSEIPIKGLSRTLSDLTENQIREAVEDEGQAIRRSVSMDSVSAMAIYQATAKI 300
           GGSN GGNSEIPIKGLS TLSDLTENQIREAVEDEGQAIRRSVSMDSVSAMAIYQATAKI
Sbjct: 241 GGSNSGGNSEIPIKGLSLTLSDLTENQIREAVEDEGQAIRRSVSMDSVSAMAIYQATAKI 300

Query: 301 QIPEEGSSSSGALVEVNNSVSSRNLPFPKRGVGNQSLYNLVKSIPFGRSVQKGGISMKML 360
           QIPEEGSSSSGALVEV NSVSSRN+PFPKRGVGNQSLYNLVKSIPFGRSVQKGGISMKML
Sbjct: 301 QIPEEGSSSSGALVEVKNSVSSRNVPFPKRGVGNQSLYNLVKSIPFGRSVQKGGISMKML 360

Query: 361 SSGRRKIHWARHYRSQSSVLPM 382
           SSGRRKIH ARHYRSQSSVLPM
Sbjct: 361 SSGRRKIHSARHYRSQSSVLPM 381

[Close]

BLAST of Csor.00g059150 vs. ExPASy TrEMBL
Match: A0A0A0KK07 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_6G499220 PE=3 SV=1)

HSP 1 Score: 553 bits (1426), Expect = 1.04e-194
Identity = 301/398 (75.63%), Postives = 324/398 (81.41%), Query Frame = 0


Query: 1   MPCHRACLG-SRYHFKFCYTLCTPNCSLLCS----------PKPPPPH---LPLLPSSGN 60
           MPC   C   +  HF+ C  LC+P CS +C           P+PPPP    LP LPSS  
Sbjct: 1   MPCQSNCAPITPSHFQVCTLLCSPKCSSICFQLPKAPIVDLPRPPPPPPLPLPQLPSSIV 60

Query: 61  PPRPH-PSGKTLLLLSLISTATLVVAIFMVCLLVKKLKEYRNSRQNG-PPLFDVHRENLP 120
           PP+ H P   TLLLLSLI+TATLV AIF++CLL KK +EYRNSR N  P LFDV  ENLP
Sbjct: 61  PPQNHTPERSTLLLLSLITTATLVAAIFLLCLLFKKFREYRNSRHNRLPVLFDVQAENLP 120

Query: 121 DDDEEEGPVLDHHVWYINTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESL 180
           D+DEEE PV+DHHVWYINTVGLQQS IDSITMFKYRKDEKLI+GSDCSICLGEFQDDESL
Sbjct: 121 DNDEEE-PVIDHHVWYINTVGLQQSAIDSITMFKYRKDEKLIDGSDCSICLGEFQDDESL 180

Query: 181 RLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSTAPNLVPIEPIRNQPPAIEDTQME 240
           RLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLS+   P+L PIEPI NQP  IE+ Q E
Sbjct: 181 RLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSDPATPSLAPIEPITNQPAPIENIQRE 240

Query: 241 TEAVEEENRGNENSGEGGSNIGGNSEIPIKGLSRTLSDLTENQIREAVEDEGQAIRRSVS 300
           TEA+EEENR +ENSGE GSN G NS IPIK LSRTLS+LTENQ REAVEDEGQ IRRSVS
Sbjct: 241 TEAIEEENREDENSGEVGSNSGENSVIPIKRLSRTLSNLTENQNREAVEDEGQGIRRSVS 300

Query: 301 MDSVSAMAIYQATAKIQIPEEGSSSSGALVEVNNSVSSRNLPFPKRGVGNQSLYNLVKSI 360
           MDSVSAMAIYQATAKIQIPEEG SSSG L+EV NSVSSRNLPFPK G+GNQSLYNLVK I
Sbjct: 301 MDSVSAMAIYQATAKIQIPEEGCSSSGTLMEVKNSVSSRNLPFPKGGIGNQSLYNLVKGI 360

Query: 361 PFGRSVQKGGISMKMLSSGRRKIHWARHYRSQSSVLPM 382
            FG S+QKGGISMK  SSGRRK+ WARHYRSQSSVLPM
Sbjct: 361 SFGCSMQKGGISMKRFSSGRRKLQWARHYRSQSSVLPM 397

[Close]

BLAST of Csor.00g059150 vs. ExPASy TrEMBL
Match: A0A5A7T0B5 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003050 PE=3 SV=1)

HSP 1 Score: 507 bits (1306), Expect = 1.40e-176
Identity = 287/403 (71.22%), Postives = 316/403 (78.41%), Query Frame = 0


Query: 1   MPCHRACLGSR-YHFKFCYTLCTPNCSLLC--------------SPKPPPPH---LPLLP 60
           M C   C+ +   HF+ C +LC+P CS LC               P+PPPP    LP LP
Sbjct: 1   MSCQSNCVPTTPSHFQVCTSLCSPKCSGLCFGLPKVPIVVLPRPQPRPPPPPPLPLPQLP 60

Query: 61  SSGNPPRPHPSGK-TLLLLSLISTATLVVAIFMVCLLVKKLKEYRNSRQNG-PPLFDVHR 120
           SS  PP+ H  G+ TLLLLSLI+TATLV AIFM+CLL KK +EYRNSR N  P LFDV  
Sbjct: 61  SSIVPPQTHTPGRSTLLLLSLITTATLVAAIFMLCLLFKKFREYRNSRHNRLPVLFDVQG 120

Query: 121 ENLPDDDEEEGPVLDHHVWYINTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQD 180
           ENLPD DEEE PV+DHHVWYINTVGLQQS+IDSITMFKYRKDEKLI+GSDCSICLGEFQD
Sbjct: 121 ENLPDSDEEE-PVIDHHVWYINTVGLQQSVIDSITMFKYRKDEKLIDGSDCSICLGEFQD 180

Query: 181 DESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSTAPNLVPIEPIR-NQPPAIE 240
           DESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLS+S AP+L PIEPIR NQP  IE
Sbjct: 181 DESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSDSVAPSLAPIEPIRRNQPEPIE 240

Query: 241 DTQMETEAVEEENRGNENSGEGGSNIGGNSEIPIKGLSRTLSDLTENQIREAVEDEGQAI 300
           +TQMETE +EEEN  +ENSGE G     NSEI IK LSRTLS+L +N   EAVEDEGQ +
Sbjct: 241 NTQMETETIEEENGVDENSGEVGRE---NSEILIKRLSRTLSNLNQNS--EAVEDEGQGL 300

Query: 301 RRSVSMDSVSAMAIYQATAKIQIPEEGSSSSGALVEVNNSVSSRNLPFPKRGVGNQSLYN 360
           RRSVSMDSVSAMAIYQ T KIQIPEEG SS+G L+EV +SVSS+NL       GNQSLYN
Sbjct: 301 RRSVSMDSVSAMAIYQVTTKIQIPEEGCSSNGTLMEVKDSVSSKNL-------GNQSLYN 360

Query: 361 LVKSIPFGRSVQKGGISMKMLSSGRRKIHWARHYRSQSSVLPM 382
           LVKSI FG S+QKGGIS+K  SSGRRK+ WARHYRSQSSVLPM
Sbjct: 361 LVKSISFGHSMQKGGISIKRFSSGRRKLQWARHYRSQSSVLPM 390

[Close]

BLAST of Csor.00g059150 vs. ExPASy TrEMBL
Match: A0A1S3B1E6 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103484949 PE=3 SV=1)

HSP 1 Score: 507 bits (1306), Expect = 1.40e-176
Identity = 287/403 (71.22%), Postives = 316/403 (78.41%), Query Frame = 0


Query: 1   MPCHRACLGSR-YHFKFCYTLCTPNCSLLC--------------SPKPPPPH---LPLLP 60
           M C   C+ +   HF+ C +LC+P CS LC               P+PPPP    LP LP
Sbjct: 1   MSCQSNCVPTTPSHFQVCTSLCSPKCSGLCFGLPKVPIVVLPRPQPRPPPPPPLPLPQLP 60

Query: 61  SSGNPPRPHPSGK-TLLLLSLISTATLVVAIFMVCLLVKKLKEYRNSRQNG-PPLFDVHR 120
           SS  PP+ H  G+ TLLLLSLI+TATLV AIFM+CLL KK +EYRNSR N  P LFDV  
Sbjct: 61  SSIVPPQTHTPGRSTLLLLSLITTATLVAAIFMLCLLFKKFREYRNSRHNRLPVLFDVQG 120

Query: 121 ENLPDDDEEEGPVLDHHVWYINTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQD 180
           ENLPD DEEE PV+DHHVWYINTVGLQQS+IDSITMFKYRKDEKLI+GSDCSICLGEFQD
Sbjct: 121 ENLPDSDEEE-PVIDHHVWYINTVGLQQSVIDSITMFKYRKDEKLIDGSDCSICLGEFQD 180

Query: 181 DESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSTAPNLVPIEPIR-NQPPAIE 240
           DESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLS+S AP+L PIEPIR NQP  IE
Sbjct: 181 DESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSDSVAPSLAPIEPIRRNQPEPIE 240

Query: 241 DTQMETEAVEEENRGNENSGEGGSNIGGNSEIPIKGLSRTLSDLTENQIREAVEDEGQAI 300
           +TQMETE +EEEN  +ENSGE G     NSEI IK LSRTLS+L +N   EAVEDEGQ +
Sbjct: 241 NTQMETETIEEENGVDENSGEVGRE---NSEILIKRLSRTLSNLNQNS--EAVEDEGQGL 300

Query: 301 RRSVSMDSVSAMAIYQATAKIQIPEEGSSSSGALVEVNNSVSSRNLPFPKRGVGNQSLYN 360
           RRSVSMDSVSAMAIYQ T KIQIPEEG SS+G L+EV +SVSS+NL       GNQSLYN
Sbjct: 301 RRSVSMDSVSAMAIYQVTTKIQIPEEGCSSNGTLMEVKDSVSSKNL-------GNQSLYN 360

Query: 361 LVKSIPFGRSVQKGGISMKMLSSGRRKIHWARHYRSQSSVLPM 382
           LVKSI FG S+QKGGIS+K  SSGRRK+ WARHYRSQSSVLPM
Sbjct: 361 LVKSISFGHSMQKGGISIKRFSSGRRKLQWARHYRSQSSVLPM 390

[Close]

BLAST of Csor.00g059150 vs. TAIR 10
Match: AT4G33565.1 (RING/U-box superfamily protein )

HSP 1 Score: 144.1 bits (362), Expect = 2.6e-34
Identity = 96/324 (29.63%), Postives = 159/324 (49.07%), Query Frame = 0


Query: 3   CHRACLGSRYHFKFCYTLCTPNCSLLCSPKPPPPHLPLLPSSGNPPRPHPSGKTLLLLSL 62
           C   C+       +C + C   C  +C          ++ S  +PP        L  + +
Sbjct: 75  CKNNCIQELKTLGYCSSYCLDECPSICE--------IVVISGLSPPAEIHHDDNLKRILI 134

Query: 63  ISTATLVVAIFMVCLLVKKLKEYRNSRQN--GPPLFDVHRENLPDDDEEEGPVLDHHVWY 122
           IS ++++  +F++ LLV   K Y   R++      + +      D D     ++DH +W+
Sbjct: 135 ISASSIITTLFLLTLLVLCFKFYYRRRRSITTSRRWSMEEARNWDFDGPAPVIVDHPIWH 194

Query: 123 INTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCID 182
           I T+GL  ++I SI + +Y K + ++EG+DCS+CL EF+++E+LRLLPKC HAFH+ CID
Sbjct: 195 IRTIGLNPTVISSIKVCQYSKKDGVVEGTDCSVCLSEFEEEETLRLLPKCKHAFHLYCID 254

Query: 183 TWLRSHKNCPLCRAPVLSNSTAPNLVPIEPIRNQPPAIEDTQMETEAVEEENRGNENSGE 242
           TWLRSH NCPLCRAP++  +T         I +    +E+  +    + EEN G++   E
Sbjct: 255 TWLRSHTNCPLCRAPIVEANTM--------IDDHSEGLEEISV---MIPEEN-GDDTDEE 314

Query: 243 GGSNIGGNSEIPIKGLSRTLSDLTENQIREAVEDEGQAIRRSVSMDSVSAMAIYQATA-- 302
                          +         N  R+  E + Q +RRSVS+DS+S + + +     
Sbjct: 315 ---------------IEEERDGFVSNISRDHGESQQQRVRRSVSLDSLSGLRVSEVVVGR 363

Query: 303 -KIQIPEEGSSSSGALVEVNNSVS 322
            K ++    +  SG    +  S+S
Sbjct: 375 EKEKLKRGNNIGSGRSSLLKRSIS 363

[Close]

BLAST of Csor.00g059150 vs. TAIR 10
Match: AT5G10380.1 (RING/U-box superfamily protein )

HSP 1 Score: 142.9 bits (359), Expect = 5.8e-34
Identity = 92/237 (38.82%), Postives = 125/237 (52.74%), Query Frame = 0


Query: 4   HRACLGSRYHFK---FCYTLCTPNCSLLCSPKPPPPHLPLLPSSGNPPRPHPSGKTLLLL 63
           HR  L S   FK   FC+    P       P PPPP          PPR       LL  
Sbjct: 5   HRKMLLSCLQFKDLRFCFRQYPP-------PPPPPP----------PPR---ELSLLLPT 64

Query: 64  SLISTATLVVAIFMVCLLVKKLKEYRNSRQNGPPLFDVHRENLPDDDEEEGPVLDHHVWY 123
           S+    ++++ +F+V  L   + + R          D +++   D+ EE      HHVW 
Sbjct: 65  SICVVGSIILFLFLVFFLYLHITQQRRISAASVTPGDTNQQEDEDETEERDFSDFHHVWQ 124

Query: 124 INTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCID 183
           I TVGL +S I+SIT+  ++K E +I+G++CS+CL EF++DESLRLLPKCSHAFH+ CID
Sbjct: 125 IPTVGLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNCID 184

Query: 184 TWLRSHKNCPLCRAPVLSNSTAPNLVPIEPIRNQPPAIEDTQMETEAVEEENRGNEN 238
           TWL SHKNCPLCRAPVL  +  P+        +QP +     +        +R N N
Sbjct: 185 TWLLSHKNCPLCRAPVLLITEPPH--QETETNHQPDSESSNDLRGRQDSSRSRRNHN 219

[Close]

BLAST of Csor.00g059150 vs. TAIR 10
Match: AT1G72220.1 (RING/U-box superfamily protein )

HSP 1 Score: 139.0 bits (349), Expect = 8.4e-33
Identity = 98/257 (38.13%), Postives = 139/257 (54.09%), Query Frame = 0


Query: 20  LCTPNCSLLCSPKPP----PPHLPLLPSSGNP-PRPHPSGKTLLL--------LSLISTA 79
           +C P C   C P+P      P LP   SS  P P P PS   + L        L  IS  
Sbjct: 27  VCDPICPYNCYPEPDYYTISPQLPPWSSSPQPSPCPSPSISAVYLPSQDSSSSLDAISII 86

Query: 80  TLVVAIFMVCL----LVKKLKEYRNSRQNGPPLFDVHREN--LPDDDEEEGPVLDHHVWY 139
           T+  A+  + L    LV K      +R N       + +N  + +++ ++   +DH +W 
Sbjct: 87  TITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVMEEEFQDREQVDHPIWL 146

Query: 140 INTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCID 199
           I T GLQQSII+SIT+  Y++ + LIE +DC +CL EF++DESLRLLPKC+HAFH+ CID
Sbjct: 147 IRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAFHISCID 206

Query: 200 TWLRSHKNCPLCRAPV--LSNSTAPNLVPIEPIRNQPPAIEDTQMETEAVEEENRGN-EN 255
           TWL SH NCPLCRA +  +S +T     P+E      P    + +E + V+EE+ G  EN
Sbjct: 207 TWLSSHTNCPLCRAGIAMISVTTPRYSGPVE----VTPGGSGSHLENDGVDEEDHGEIEN 266

[Close]

BLAST of Csor.00g059150 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 119.0 bits (297), Expect = 9.0e-27
Identity = 123/383 (32.11%), Postives = 186/383 (48.56%), Query Frame = 0


Query: 17  CYTLCTPNCSLLCSPKPPPPHLPLLPSSGNPPRPHPSGKTLLLLSLISTATLVVAIFMVC 76
           C   C   C L+  P PP   L    SS +      S  + LL++LI   T  + +    
Sbjct: 22  CNIYCPQWCYLIFPPPPPSFFLDDDSSSSS------SSFSPLLIALIGILTSALILVSYY 81

Query: 77  LLVKKLKEYRNSRQNGPPLFDVHRENLPDDDEEEGPVLDHHVWYINTVGLQQSIIDSITM 136
            L+ K     +   +         E L  +   EG          N  GL +S+I SIT+
Sbjct: 82  TLISKYCHRHHQTSSS--------ETLNLNHNGEGFFSSTQRISTNGDGLNESMIKSITV 141

Query: 137 FKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPV 196
           +KY+  +  ++GSDCS+CL EF+++ESLRLLPKC+HAFH+PCIDTWL+SH NCPLCRA V
Sbjct: 142 YKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFV 201

Query: 197 --LSNSTA---PNLVPIEPIRNQPPAIEDTQMETEAVEEENRGNENSGEGGSNIGG-NSE 256
             ++N TA    N+  +  + NQ  +   T   +E        N N     S  G  +S 
Sbjct: 202 TGVNNPTASVGQNVSVV--VANQSNSAHQTGSVSEI-------NLNLAGYESQTGDFDSV 261

Query: 257 IPIKGL---SRTLSDLTENQI----REAVEDEGQAIRRSVSMDSVSAMAIYQATAKIQIP 316
           + I+ L   SR     +E Q+    RE  +++   IRRSVS++S   ++I     +I+  
Sbjct: 262 VVIEDLEIGSRNSDARSELQLPEERRETKDEDSLPIRRSVSLNSGVVVSIADVLREIE-D 321

Query: 317 EEGSSSSGALVEVNNSVSSRNLPFPKRGVGNQSLYNLVKSIPFGRSVQK-GGIS---MKM 376
           EEG S            +S+     + G G        K+IP   + Q+ GG+S   ++ 
Sbjct: 322 EEGESGGVG--------TSQRREEGEDGDG--------KTIPPTEANQRSGGVSGFFVRS 362

Query: 377 LSSGRRKIHWARHYRSQSSVLPM 383
           LS+GR    ++R+ R ++  LP+
Sbjct: 382 LSTGR--FIFSRYDRGRNYRLPL 362

[Close]

BLAST of Csor.00g059150 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 114.8 bits (286), Expect = 1.7e-25
Identity = 83/241 (34.44%), Postives = 127/241 (52.70%), Query Frame = 0


Query: 20  LCTPNCSLLCSPKPPPPHLPLLPSSGNPPRPHPSGKTLLLLSLISTATLVVAIFMVCLLV 79
           +C+  C   C    PPP    L    +      S   + L+ ++++A ++V+ +    L+
Sbjct: 24  VCSVYCPQWCYVIFPPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYY---TLI 83

Query: 80  KKLKEYRNSRQNGPPLFDVHRENLPDDDEEEGPVLDHHVWYIN---TV------GLQQSI 139
            K    R    +      ++R  +  D   +G   +++    N   T+      GL +S+
Sbjct: 84  SKYCHRRRHNSSSTSAAAINR--ISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESL 143

Query: 140 IDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCIDTWLRSHKNCP 199
           I SIT++KYRK +  +E SDCS+CL EFQ++ESLRLLPKC+HAFHVPCIDTWL+SH NCP
Sbjct: 144 IKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCP 203

Query: 200 LCRAPVLSNSTAPNLVPIEPIRNQPPAIEDTQMET--EAVEEENRGNENSGEGGSNIGGN 250
           LCRA ++++S     V I  + NQ    E+  + T  ++V   N   ENS      +   
Sbjct: 204 LCRAFIVTSSA----VEIVDLTNQQIVTENNSISTGDDSVVVVNLDLENSRSRNETVNEG 255

The following BLAST results are available for this feature:

BLAST of Csor.00g059150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LX93	8.2e-33	38.82	E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 ...	[more]
Q8LFY8	1.2e-31	38.13	RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2	[more]
Q9LF64	1.3e-25	32.11	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q9SRQ8	2.4e-24	34.44	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]
P0C041	5.9e-23	36.79	Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 P...	[more]

BLAST of Csor.00g059150 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6604048.1	7.18e-302	100.00	RING-H2 finger protein ATL54, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7034214.1	1.58e-275	97.46	RING-H2 finger protein ATL54, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_023544216.1	8.17e-270	97.92	E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022949771.1	5.99e-269	97.91	E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata]	[more]
XP_022978507.1	1.38e-258	95.55	RING-H2 finger protein ATL54-like [Cucurbita maxima]	[more]

BLAST of Csor.00g059150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GCY1	2.90e-269	97.91	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111453059...	[more]
A0A6J1IL98	6.66e-259	95.55	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111478464 P...	[more]
A0A0A0KK07	1.04e-194	75.63	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_6G499220 PE...	[more]
A0A5A7T0B5	1.40e-176	71.22	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3B1E6	1.40e-176	71.22	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103484949 PE=3 ...	[more]

BLAST of Csor.00g059150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33565.1	2.6e-34	29.63	RING/U-box superfamily protein	[more]
AT5G10380.1	5.8e-34	38.82	RING/U-box superfamily protein	[more]
AT1G72220.1	8.4e-33	38.13	RING/U-box superfamily protein	[more]
AT5G17600.1	9.0e-27	32.11	RING/U-box superfamily protein	[more]
AT3G03550.1	1.7e-25	34.44	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 151..192 e-value: 1.5E-7 score: 41.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 150..193 e-value: 5.6E-14 score: 52.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 151..193 score: 12.754832
None	No IPR available	SMART	SM01197	FANCL_C_2	coord: 147..200 e-value: 0.0092 score: -1.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..251
None	No IPR available	PANTHER	PTHR45676:SF126	RING-H2 FINGER PROTEIN ATL54	coord: 15..367
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 150..193 e-value: 1.63292E-17 score: 73.8753
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 139..199
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 126..201 e-value: 5.6E-23 score: 82.0
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 15..367

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g059150.m01	Csor.00g059150.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane