Csor.00g059030 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g059030
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	UPF0029 domain-containing protein
Location	Csor_Chr03: 6811235 .. 6813596 (+)
RNA-Seq Expression	Csor.00g059030
Synteny	Csor.00g059030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCGTAGCAATTGCCTCTGCCGCAGCGCCAAATTTTCGTTACTTCAAGACTCTGAACCTCAACACTCGATTCTCTTCCTCACTGTGCGCAATTGCTCGGGATAAGAAAGATATGGTCACAACAGTCAGTAGTAGTAGCGGAAATGCAGGCGCATACACCACGATCAAAGAGATTGTGAGATTCGAAAAAGAAATCAAGAAGAGCAAGTTCATCGCCATCGCTGGTCCTGTCACCAATGAGCAGACTGCCTTCTCTTTTCTCTCCCAGGTGTTCTATGCTAGATTCTCATGGAGGAGTTTCCGATTTCTATTCCTGTTTAGCCTCGCTGCCTTTCTGTTTGTTTCCTGGAATAAATTCTCTTTTGTTCCCTTGGGATTCTATATGCCATTTTCTTTGAAGTTGTAAATTATATCGCACTTTACATTGTACATGATTCAATTGGCAAAGCTATCTATTTTGTAGTGAAATTCGTTATTGCAAATTGTATTATGACATTAGCGTCACTCTTTTAATCTCAAATATTGGAACATTGCCTCAAAATGCGTCCTTAAAAATCTTCTAGAATAGGATCGATATGTTTGTGTGAAATTCACTAATCTGGCAGGCATTTTTTGTGGTGAAACTCAGGTACGGGAACCGCGAGCTACTCACAATTGCTGGGCGTATCAGGTGCTTCTTTATCTCTTGCATGTTGTTGGATATGGTTAGATGTATTAGTTGTTACAGTTCTTGAAGAATATCTATTATGGGGTAGTTCACCATCCGTCACAGTGGTCTAATACTTTGCTCTTCACGTGGTCTGTTGAAGGTGTAATGTAACAGAGTTTATGCTAAATCACGTGATAAAATACTACATGAATAAATCTATCATCTCTTTTATATTTTTACAAAAATAACATTCCTTAAATATGATAAGAAAGATGCTACGGTTAGTTTCTGTTTTACATTTTTACACTGTTTATTTTGATAGACCTGAAAATTTTCTGCTGCGAATGTAATATCAATTAGTTTCTGACATTCCCTCGTATTTTAAAGCTCGCAAGTTTCTGATGGTCATATTATTACTTCAAAATGCAATGCTCCAGTTTTTCAGAGAGTTTTTTTTGTTCAAGAGGATTCCCATAAAGAGATGTTGAGAGGGGAGTTAATATATTTACTTCCCTGATCTCAATTCCTTTATTTATAACTTCTCTTGACTCTATTCAGGTTGGAGATCAATTTAGGTCTAATGATGATGGCGAGCCATCTGGTACTGCTGGAAAACCAATTCATTCTGCCATTGTCTCTTCGGGTATTGACAGAGTCATGGTGGTCGTGATCAGGTATTCTCTTTGCAAATAATAGGAATTAGGTTGAAACATAGTTTTTGGGATCTATTTCTAAGCAATTTTCATGGGCAAAATACTAGCCAATCGTTGACTTGGAATCCTCTTATTAATGCTTTTGGTTGATATGAATGTGTATGCTTGCCATGTGCTATAGCTAACTTCGTATGATATCTTTTCCCTCTACCAAATTTTAGGTATTTTGGAGGTATCAAACTCGGGACTGGGGGACTAGTCAGGGCTTATGGGGGAGTAGCTTCCGAATGCCTGAAAAGTGCTCAAACATGTGTCGTGAAATCTAAGGTGTTTCTTCTTCCCTCAATAGTTGTCACCCTGTGATGCTAGTATTACTCAGAAGTTTATGGAGCAAATTAACTGTACTAAACTATTTTAAATTGATTTACACAGTAAATGTTATTTTTGATAAATTGGGTTCCATGTCTTTTAGGTTCCAATGGGCGTGGAGGTACCATTCAATCTTCTAGGGGCTTTGTACCACCAGGTAAATTTGCCCATGTGATCAAGAGTTATCTTGTATGCCTCTGTCACGGGTTTGAATTTTCATCTCTAGTGCTTTTTCCCCTCAGATATTGGACGGTTATTGTTTGAACTATGGTCTCTGATTTTTCATTTGTTTCTGCTTGTTTTTTCTTCCTTCGGTATAGTTCTCATGTCATAGTCAATATTGCATTTACTTTGGACGGAAACATTTTTCTATAATTCTTACAATTACATATATACCATAGAGTGATGATCTTTCGGCTCCAGCAATAACAGAAAGGTTCTACTGTTCTGTCATGCACAGTATCCGTTTCTTCTGCCGCCTTTTTAAATGGATATTATTGTAGAGCTGAAATTTGTGTCGGTGTTTGCAGTTGCAATCTTTTCACGTTGAGGACATTAAGCAGGACTATGACTGTGGTAAAGATGGTATTACCATGGTGACATTCAAGGTTGATTTCGACCATGTTGAGAAGCTGGAGGATGCTATCAAATCTCATTGTAGCCGTGAATTAATCTTTTACAAGCAATAA

mRNA sequence

ATGCCCGTAGCAATTGCCTCTGCCGCAGCGCCAAATTTTCGTTACTTCAAGACTCTGAACCTCAACACTCGATTCTCTTCCTCACTGTGCGCAATTGCTCGGGATAAGAAAGATATGGTCACAACAGTCAGTAGTAGTAGCGGAAATGCAGGCGCATACACCACGATCAAAGAGATTGTGAGATTCGAAAAAGAAATCAAGAAGAGCAAGTTCATCGCCATCGCTGGTCCTGTCACCAATGAGCAGACTGCCTTCTCTTTTCTCTCCCAGGTACGGGAACCGCGAGCTACTCACAATTGCTGGGCGTATCAGGTTGGAGATCAATTTAGGTCTAATGATGATGGCGAGCCATCTGGTACTGCTGGAAAACCAATTCATTCTGCCATTGTCTCTTCGGGTATTGACAGAGTCATGGTGGTCGTGATCAGGTATTTTGGAGGTATCAAACTCGGGACTGGGGGACTAGTCAGGGCTTATGGGGGAGTAGCTTCCGAATGCCTGAAAAGTGCTCAAACATGTGTCGTGAAATCTAAGGTTCCAATGGGCGTGGAGGTACCATTCAATCTTCTAGGGGCTTTGTACCACCAGTTGCAATCTTTTCACGTTGAGGACATTAAGCAGGACTATGACTGTGGTAAAGATGGTATTACCATGGTGACATTCAAGGTTGATTTCGACCATGTTGAGAAGCTGGAGGATGCTATCAAATCTCATTGTAGCCGTGAATTAATCTTTTACAAGCAATAA

Coding sequence (CDS)

ATGCCCGTAGCAATTGCCTCTGCCGCAGCGCCAAATTTTCGTTACTTCAAGACTCTGAACCTCAACACTCGATTCTCTTCCTCACTGTGCGCAATTGCTCGGGATAAGAAAGATATGGTCACAACAGTCAGTAGTAGTAGCGGAAATGCAGGCGCATACACCACGATCAAAGAGATTGTGAGATTCGAAAAAGAAATCAAGAAGAGCAAGTTCATCGCCATCGCTGGTCCTGTCACCAATGAGCAGACTGCCTTCTCTTTTCTCTCCCAGGTACGGGAACCGCGAGCTACTCACAATTGCTGGGCGTATCAGGTTGGAGATCAATTTAGGTCTAATGATGATGGCGAGCCATCTGGTACTGCTGGAAAACCAATTCATTCTGCCATTGTCTCTTCGGGTATTGACAGAGTCATGGTGGTCGTGATCAGGTATTTTGGAGGTATCAAACTCGGGACTGGGGGACTAGTCAGGGCTTATGGGGGAGTAGCTTCCGAATGCCTGAAAAGTGCTCAAACATGTGTCGTGAAATCTAAGGTTCCAATGGGCGTGGAGGTACCATTCAATCTTCTAGGGGCTTTGTACCACCAGTTGCAATCTTTTCACGTTGAGGACATTAAGCAGGACTATGACTGTGGTAAAGATGGTATTACCATGGTGACATTCAAGGTTGATTTCGACCATGTTGAGAAGCTGGAGGATGCTATCAAATCTCATTGTAGCCGTGAATTAATCTTTTACAAGCAATAA

Protein sequence

MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMVTTVSSSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKVDFDHVEKLEDAIKSHCSRELIFYKQ

Homology

[Close]

BLAST of Csor.00g059030 vs. ExPASy Swiss-Prot
Match: P32438 (IMPACT family member in pol 5'region (Fragment) OS=Thermus thermophilus OX=274 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.5e-31
Identity = 67/138 (48.55%), Postives = 99/138 (71.74%), Query Frame = 0


Query: 66  IKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSGTAGKPI 125
           I++S+F+A A P  +E+ A +FL+  REP+ATHN +AY++G  +R +DDGEP    G+PI
Sbjct: 2   IQRSRFLAKAAPAASEEEALAFLAAHREPQATHNAYAYRIGPLYRFSDDGEPR-APGRPI 61

Query: 126 HSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEV 185
             AI ++G+DRV+V+V+RYFGG+KLG GGLVRAYGGVA+E L+ A    +   V +   V
Sbjct: 62  LHAIEAAGLDRVVVLVVRYFGGVKLGAGGLVRAYGGVAAEALRRAPKAPLLDWVEVAFRV 121

Query: 186 PFNLLGALYHQLQSFHVE 204
           PF  +G ++  L++ H+E
Sbjct: 122 PFPEVGRVHGLLRARHLE 138

[Close]

BLAST of Csor.00g059030 vs. ExPASy Swiss-Prot
Match: P44842 (IMPACT family member HI_0722 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_0722 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.3e-22
Identity = 60/164 (36.59%), Postives = 91/164 (55.49%), Query Frame = 0


Query: 53  YTTIKEIVRFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVRE--PRATHNCWAYQVGD--- 112
           Y   K  V FE+EIKKS+FI         + A +F +++++  P A H+CWA   G    
Sbjct: 4   YLVPKSAVVFEEEIKKSRFITYLQHTEGLEDARAFWAKIKQEHPNARHHCWAAVAGKPTD 63

Query: 113 --QFRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASE 172
             Q   +DDGEP+GTAGKP+ SA+  S +  +  VV+RY+GGI LGTGGLVRAYG    +
Sbjct: 64  SLQLGFSDDGEPAGTAGKPMLSALQGSQLGEISAVVVRYYGGILLGTGGLVRAYGNGVQQ 123

Query: 173 CLKSAQTCVVKSKVPMGVEVPFNLLGALYHQLQSFHVEDIKQDY 210
            LK  ++ +   +    ++  +  L  +    + + VE + Q +
Sbjct: 124 ALKLIESEIKVERTLFKLDCDYGQLRLVQQLCEKYQVEILSQGF 167

[Close]

BLAST of Csor.00g059030 vs. ExPASy Swiss-Prot
Match: P32437 (IMPACT family member YvyE OS=Bacillus subtilis (strain 168) OX=224308 GN=yvyE PE=3 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 4.3e-21
Identity = 61/152 (40.13%), Postives = 84/152 (55.26%), Query Frame = 0


Query: 52  AYTTIKEIVRFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREP--RATHNCWAYQVGDQ- 111
           +Y T+KE    E  I+KS+FI     V+ EQ A  F+ ++++    ATHNC AY +G+  
Sbjct: 4   SYFTVKEAGEHEIVIEKSRFICHLSRVSTEQEAQEFIQKIKKQHWNATHNCSAYVIGEND 63

Query: 112 --FRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASEC 171
              ++NDDGEPSGTAG P+   +    +     VV RYFGGIKLG GGL+RAYG   SE 
Sbjct: 64  HIQKANDDGEPSGTAGVPMLEVLKKRRLKDTCAVVTRYFGGIKLGAGGLIRAYGKSVSEG 123

Query: 172 LKSAQTCVVKSKVPMGVEVPFNLLGALYHQLQ 199
           L        K    M     +  LG + ++L+
Sbjct: 124 LNHIGVVERKLMRIMHTSADYTWLGKIENELR 155

[Close]

BLAST of Csor.00g059030 vs. ExPASy Swiss-Prot
Match: P27862 (IMPACT family member YigZ OS=Escherichia coli (strain K12) OX=83333 GN=yigZ PE=1 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 6.2e-20
Identity = 58/141 (41.13%), Postives = 82/141 (58.16%), Query Frame = 0


Query: 64  KEIKKSKFIAIAGPVTNEQTAFSFLSQVR--EPRATHNCWAYQVG-----DQFRSNDDGE 123
           +EIKKS+FI +       + A +F+  VR   P A H+C A+  G      Q   +DDGE
Sbjct: 15  EEIKKSRFITMLAHTDGVEAAKAFVESVRAEHPDARHHCVAWVAGAPDDSQQLGFSDDGE 74

Query: 124 PSGTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVK 183
           P+GTAGKP+ + ++ SG+  +  VV+RY+GGI LGTGGLV+AYGG  ++ L+   T   +
Sbjct: 75  PAGTAGKPMLAQLMGSGVGEITAVVVRYYGGILLGTGGLVKAYGGGVNQALRQLTT---Q 134

Query: 184 SKVPMGVEVPFNLLGALYHQL 198
            K P+        L   YHQL
Sbjct: 135 RKTPLTEYT----LQCEYHQL 148

[Close]

BLAST of Csor.00g059030 vs. NCBI nr
Match: XP_022950841.1 (uncharacterized protein LOC111453822 [Cucurbita moschata] >KAG6604060.1 hypothetical protein SDJN03_04669, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 496 bits (1277), Expect = 5.61e-177
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMVTTVSSSSGNAGAYTTIKEIV 60
           MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMVTTVSSSSGNAGAYTTIKEIV
Sbjct: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMVTTVSSSSGNAGAYTTIKEIV 60

Query: 61  RFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSGT 120
           RFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSGT
Sbjct: 61  RFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSGT 120

Query: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180
           AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP
Sbjct: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180

Query: 181 MGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKVDFDHVEKLEDAIKSHCS 240
           MGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKVDFDHVEKLEDAIKSHCS
Sbjct: 181 MGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKVDFDHVEKLEDAIKSHCS 240

Query: 241 RELIFYKQ 248
           RELIFYKQ
Sbjct: 241 RELIFYKQ 248

[Close]

BLAST of Csor.00g059030 vs. NCBI nr
Match: KAG7034226.1 (hypothetical protein SDJN02_03953 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 494 bits (1271), Expect = 4.61e-176
Identity = 246/248 (99.19%), Postives = 247/248 (99.60%), Query Frame = 0


Query: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMVTTVSSSSGNAGAYTTIKEIV 60
           MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMVTT+SSSSGNAGAYTTIKEIV
Sbjct: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMVTTISSSSGNAGAYTTIKEIV 60

Query: 61  RFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSGT 120
           RFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSGT
Sbjct: 61  RFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSGT 120

Query: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180
           AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP
Sbjct: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180

Query: 181 MGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKVDFDHVEKLEDAIKSHCS 240
           MGVEVPFNLLG LYHQLQSFHVEDIKQDYDCGKDGITMVTFKVDFDHVEKLEDAIKSHCS
Sbjct: 181 MGVEVPFNLLGPLYHQLQSFHVEDIKQDYDCGKDGITMVTFKVDFDHVEKLEDAIKSHCS 240

Query: 241 RELIFYKQ 248
           RELIFYKQ
Sbjct: 241 RELIFYKQ 248

[Close]

BLAST of Csor.00g059030 vs. NCBI nr
Match: XP_023543995.1 (uncharacterized protein LOC111803702 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 493 bits (1268), Expect = 8.82e-175
Identity = 246/248 (99.19%), Postives = 247/248 (99.60%), Query Frame = 0


Query: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMVTTVSSSSGNAGAYTTIKEIV 60
           MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMVTTVSS+SGNAGAYTTIKEIV
Sbjct: 53  MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMVTTVSSTSGNAGAYTTIKEIV 112

Query: 61  RFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSGT 120
           RFEKEIKKSKFIAIAGPVTNEQTAFS LSQVREPRATHNCWAYQVGDQFRSNDDGEPSGT
Sbjct: 113 RFEKEIKKSKFIAIAGPVTNEQTAFSLLSQVREPRATHNCWAYQVGDQFRSNDDGEPSGT 172

Query: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180
           AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP
Sbjct: 173 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 232

Query: 181 MGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKVDFDHVEKLEDAIKSHCS 240
           MGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKVDFDHVEKLEDAIKSHCS
Sbjct: 233 MGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKVDFDHVEKLEDAIKSHCS 292

Query: 241 RELIFYKQ 248
           RELIFYKQ
Sbjct: 293 RELIFYKQ 300

[Close]

BLAST of Csor.00g059030 vs. NCBI nr
Match: XP_022978806.1 (uncharacterized protein LOC111478661 [Cucurbita maxima])

HSP 1 Score: 481 bits (1239), Expect = 3.62e-171
Identity = 243/249 (97.59%), Postives = 246/249 (98.80%), Query Frame = 0


Query: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMVTTVSSSS-GNAGAYTTIKEI 60
           MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDM TTVSSSS GNAGAYTTIKEI
Sbjct: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMFTTVSSSSSGNAGAYTTIKEI 60

Query: 61  VRFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSG 120
           VRFEKEIKKSKFIAIAGPVTNEQ+AFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSG
Sbjct: 61  VRFEKEIKKSKFIAIAGPVTNEQSAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSG 120

Query: 121 TAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKV 180
           TAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKV
Sbjct: 121 TAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKV 180

Query: 181 PMGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKVDFDHVEKLEDAIKSHC 240
           PMGVEVPFNLLGALYHQ+QSFHVEDIKQDYDCGKDGITMVTFKVDFD VEKLEDAIKS+C
Sbjct: 181 PMGVEVPFNLLGALYHQMQSFHVEDIKQDYDCGKDGITMVTFKVDFDRVEKLEDAIKSNC 240

Query: 241 SRELIFYKQ 248
           SRELIFYKQ
Sbjct: 241 SRELIFYKQ 249

[Close]

BLAST of Csor.00g059030 vs. NCBI nr
Match: XP_022133126.1 (uncharacterized protein LOC111005799 [Momordica charantia])

HSP 1 Score: 446 bits (1146), Expect = 5.23e-157
Identity = 223/248 (89.92%), Postives = 232/248 (93.55%), Query Frame = 0


Query: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMVTTVSSSSGNAGAYTTIKEIV 60
           MP AIA AAAPN RYFK L LN+R SSSLCA AR+ KDMVT  SSSSGNAGAYT IKEIV
Sbjct: 1   MPAAIAIAAAPNCRYFKNLKLNSRLSSSLCAFARENKDMVTAASSSSGNAGAYTIIKEIV 60

Query: 61  RFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSGT 120
           RFEKEIKKSKFIAIAGPV+NEQ+AFSFLSQVR+PRATHNCWAYQVGDQ+RSNDDGEPSGT
Sbjct: 61  RFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGT 120

Query: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180
           AGKPIHSAI SSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP
Sbjct: 121 AGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180

Query: 181 MGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKVDFDHVEKLEDAIKSHCS 240
           MGVEVPF+LLG LYHQLQSF VEDIKQDYD GKDGITMVTFKVDFD VEKLEDAIKS+CS
Sbjct: 181 MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDRVEKLEDAIKSNCS 240

Query: 241 RELIFYKQ 248
           RELIFYK+
Sbjct: 241 RELIFYKR 248

[Close]

BLAST of Csor.00g059030 vs. ExPASy TrEMBL
Match: A0A6J1GFX5 (uncharacterized protein LOC111453822 OS=Cucurbita moschata OX=3662 GN=LOC111453822 PE=3 SV=1)

HSP 1 Score: 496 bits (1277), Expect = 2.71e-177
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMVTTVSSSSGNAGAYTTIKEIV 60
           MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMVTTVSSSSGNAGAYTTIKEIV
Sbjct: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMVTTVSSSSGNAGAYTTIKEIV 60

Query: 61  RFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSGT 120
           RFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSGT
Sbjct: 61  RFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSGT 120

Query: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180
           AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP
Sbjct: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180

Query: 181 MGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKVDFDHVEKLEDAIKSHCS 240
           MGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKVDFDHVEKLEDAIKSHCS
Sbjct: 181 MGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKVDFDHVEKLEDAIKSHCS 240

Query: 241 RELIFYKQ 248
           RELIFYKQ
Sbjct: 241 RELIFYKQ 248

[Close]

BLAST of Csor.00g059030 vs. ExPASy TrEMBL
Match: A0A6J1IP23 (uncharacterized protein LOC111478661 OS=Cucurbita maxima OX=3661 GN=LOC111478661 PE=3 SV=1)

HSP 1 Score: 481 bits (1239), Expect = 1.75e-171
Identity = 243/249 (97.59%), Postives = 246/249 (98.80%), Query Frame = 0


Query: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMVTTVSSSS-GNAGAYTTIKEI 60
           MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDM TTVSSSS GNAGAYTTIKEI
Sbjct: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMFTTVSSSSSGNAGAYTTIKEI 60

Query: 61  VRFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSG 120
           VRFEKEIKKSKFIAIAGPVTNEQ+AFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSG
Sbjct: 61  VRFEKEIKKSKFIAIAGPVTNEQSAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSG 120

Query: 121 TAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKV 180
           TAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKV
Sbjct: 121 TAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKV 180

Query: 181 PMGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKVDFDHVEKLEDAIKSHC 240
           PMGVEVPFNLLGALYHQ+QSFHVEDIKQDYDCGKDGITMVTFKVDFD VEKLEDAIKS+C
Sbjct: 181 PMGVEVPFNLLGALYHQMQSFHVEDIKQDYDCGKDGITMVTFKVDFDRVEKLEDAIKSNC 240

Query: 241 SRELIFYKQ 248
           SRELIFYKQ
Sbjct: 241 SRELIFYKQ 249

[Close]

BLAST of Csor.00g059030 vs. ExPASy TrEMBL
Match: A0A6J1BU50 (uncharacterized protein LOC111005799 OS=Momordica charantia OX=3673 GN=LOC111005799 PE=3 SV=1)

HSP 1 Score: 446 bits (1146), Expect = 2.53e-157
Identity = 223/248 (89.92%), Postives = 232/248 (93.55%), Query Frame = 0


Query: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMVTTVSSSSGNAGAYTTIKEIV 60
           MP AIA AAAPN RYFK L LN+R SSSLCA AR+ KDMVT  SSSSGNAGAYT IKEIV
Sbjct: 1   MPAAIAIAAAPNCRYFKNLKLNSRLSSSLCAFARENKDMVTAASSSSGNAGAYTIIKEIV 60

Query: 61  RFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSGT 120
           RFEKEIKKSKFIAIAGPV+NEQ+AFSFLSQVR+PRATHNCWAYQVGDQ+RSNDDGEPSGT
Sbjct: 61  RFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGT 120

Query: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180
           AGKPIHSAI SSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP
Sbjct: 121 AGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180

Query: 181 MGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKVDFDHVEKLEDAIKSHCS 240
           MGVEVPF+LLG LYHQLQSF VEDIKQDYD GKDGITMVTFKVDFD VEKLEDAIKS+CS
Sbjct: 181 MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDRVEKLEDAIKSNCS 240

Query: 241 RELIFYKQ 248
           RELIFYK+
Sbjct: 241 RELIFYKR 248

[Close]

BLAST of Csor.00g059030 vs. ExPASy TrEMBL
Match: A0A0A0KGN8 (UPF0029 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G499080 PE=3 SV=1)

HSP 1 Score: 441 bits (1133), Expect = 2.42e-155
Identity = 221/248 (89.11%), Postives = 235/248 (94.76%), Query Frame = 0


Query: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMVTTVSSSSGNAGAYTTIKEIV 60
           MPVAIA+AAAP+FR+F  L LNTR SSSL A+ RDKKDMV T SSS+ NAGAYTTIKEIV
Sbjct: 1   MPVAIANAAAPSFRHFNKLKLNTRLSSSLGAVHRDKKDMVATASSSTPNAGAYTTIKEIV 60

Query: 61  RFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSGT 120
           RFEKEIKKSKFIAIAGPV++EQ+AFSFLSQVR+PRATHNCWAYQVGDQ+RSNDDGEPSGT
Sbjct: 61  RFEKEIKKSKFIAIAGPVSSEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGT 120

Query: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180
           AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP
Sbjct: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180

Query: 181 MGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKVDFDHVEKLEDAIKSHCS 240
           MGVEVPF+LLG LYHQLQSF VEDIKQDYD GKDGITMVTFKVDFD VEKLEDAIKS+CS
Sbjct: 181 MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCS 240

Query: 241 RELIFYKQ 248
           REL+FYK+
Sbjct: 241 RELVFYKR 248

[Close]

BLAST of Csor.00g059030 vs. ExPASy TrEMBL
Match: A0A5D3CN06 (IMPACT family member in pol 5'region isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003200 PE=3 SV=1)

HSP 1 Score: 439 bits (1129), Expect = 9.87e-155
Identity = 222/248 (89.52%), Postives = 234/248 (94.35%), Query Frame = 0


Query: 1   MPVAIASAAAPNFRYFKTLNLNTRFSSSLCAIARDKKDMVTTVSSSSGNAGAYTTIKEIV 60
           MPVAIA AAAP+FR+FK L LNTR SSSL AI R++K MV T SSSS NAGAYTTIKEIV
Sbjct: 1   MPVAIAIAAAPSFRHFKKLKLNTRLSSSLGAIHRERKAMVATASSSSRNAGAYTTIKEIV 60

Query: 61  RFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQVGDQFRSNDDGEPSGT 120
           RFEKEIKKSKFIAIAGPV+NEQ+AFSFLSQVR+PRATHNCWAYQVGDQ+RSNDDGEPSGT
Sbjct: 61  RFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGT 120

Query: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180
           AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP
Sbjct: 121 AGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVP 180

Query: 181 MGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKVDFDHVEKLEDAIKSHCS 240
           MGVEVPF+LLG LYHQLQSF VEDIKQDYD GKDGITMVTFKVDFD VEKLEDAIKS+CS
Sbjct: 181 MGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCS 240

Query: 241 RELIFYKQ 248
           REL+FYK+
Sbjct: 241 RELVFYKR 248

[Close]

BLAST of Csor.00g059030 vs. TAIR 10
Match: AT4G38090.1 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 311.2 bits (796), Expect = 7.4e-85
Identity = 151/204 (74.02%), Postives = 180/204 (88.24%), Query Frame = 0


Query: 45  SSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQ 104
           S + N+G++TT+KE V  EKEIKKSKFIAIAGP+++EQ+A  FLSQVR+PRA+HNCWAY+
Sbjct: 30  SMASNSGSFTTLKETVSVEKEIKKSKFIAIAGPISSEQSAQMFLSQVRDPRASHNCWAYK 89

Query: 105 VGD-QFRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVA 164
           +GD   R +DDGEPSGTAGKPI SAI+SSG+DRVMVVVIRYFGGIKLGTGGLVRAYGGV 
Sbjct: 90  IGDHHHRCSDDGEPSGTAGKPIQSAILSSGLDRVMVVVIRYFGGIKLGTGGLVRAYGGVT 149

Query: 165 SECLKSAQTCVVKSKVPMGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKV 224
           S+CLK+A +C+VKSKV MGVEV F+LLG LY+QLQS H EDIK+DYD GKDG  MV+FKV
Sbjct: 150 SDCLKTAPSCLVKSKVQMGVEVTFDLLGVLYNQLQSCHAEDIKEDYDTGKDGTAMVSFKV 209

Query: 225 DFDHVEKLEDAIKSHCSRELIFYK 248
           +FD V+KLEDAIKS+C R+L+FYK
Sbjct: 210 EFDLVDKLEDAIKSNCRRDLVFYK 233

[Close]

BLAST of Csor.00g059030 vs. TAIR 10
Match: AT4G38090.4 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 299.3 bits (765), Expect = 2.9e-81
Identity = 147/204 (72.06%), Postives = 177/204 (86.76%), Query Frame = 0


Query: 45  SSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQ 104
           S + N+G++TT+KE V  EKEIKKSKFIAIAGP+++EQ+A  FLSQVR+PRA+HNCWAY+
Sbjct: 30  SMASNSGSFTTLKETVSVEKEIKKSKFIAIAGPISSEQSAQMFLSQVRDPRASHNCWAYK 89

Query: 105 VGD-QFRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVA 164
           +GD   R +DDGEPSGTAGKPI SAI+SSG+DRVMVVVIRYFGGIKLGTGGLVRAYGGV 
Sbjct: 90  IGDHHHRCSDDGEPSGTAGKPIQSAILSSGLDRVMVVVIRYFGGIKLGTGGLVRAYGGVT 149

Query: 165 SECLKSAQTCVVKSKVPMGVEVPFNLLGALYHQLQSFHVEDIKQDYDCGKDGITMVTFKV 224
           S+CLK+A +C+V+    MGVEV F+LLG LY+QLQS H EDIK+DYD GKDG  MV+FKV
Sbjct: 150 SDCLKTAPSCLVQ----MGVEVTFDLLGVLYNQLQSCHAEDIKEDYDTGKDGTAMVSFKV 209

Query: 225 DFDHVEKLEDAIKSHCSRELIFYK 248
           +FD V+KLEDAIKS+C R+L+FYK
Sbjct: 210 EFDLVDKLEDAIKSNCRRDLVFYK 229

[Close]

BLAST of Csor.00g059030 vs. TAIR 10
Match: AT4G38090.2 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 233.4 bits (594), Expect = 1.9e-61
Identity = 114/154 (74.03%), Postives = 137/154 (88.96%), Query Frame = 0


Query: 45  SSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQ 104
           S + N+G++TT+KE V  EKEIKKSKFIAIAGP+++EQ+A  FLSQVR+PRA+HNCWAY+
Sbjct: 30  SMASNSGSFTTLKETVSVEKEIKKSKFIAIAGPISSEQSAQMFLSQVRDPRASHNCWAYK 89

Query: 105 VGD-QFRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVA 164
           +GD   R +DDGEPSGTAGKPI SAI+SSG+DRVMVVVIRYFGGIKLGTGGLVRAYGGV 
Sbjct: 90  IGDHHHRCSDDGEPSGTAGKPIQSAILSSGLDRVMVVVIRYFGGIKLGTGGLVRAYGGVT 149

Query: 165 SECLKSAQTCVVKSKVPMGVEVPFNLLGALYHQL 198
           S+CLK+A +C+VKSKV MGVEV F+LLG LY+Q+
Sbjct: 150 SDCLKTAPSCLVKSKVQMGVEVTFDLLGVLYNQV 183

[Close]

BLAST of Csor.00g059030 vs. TAIR 10
Match: AT4G38090.3 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 209.1 bits (531), Expect = 3.9e-54
Identity = 102/136 (75.00%), Postives = 122/136 (89.71%), Query Frame = 0


Query: 45  SSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVTNEQTAFSFLSQVREPRATHNCWAYQ 104
           S + N+G++TT+KE V  EKEIKKSKFIAIAGP+++EQ+A  FLSQVR+PRA+HNCWAY+
Sbjct: 30  SMASNSGSFTTLKETVSVEKEIKKSKFIAIAGPISSEQSAQMFLSQVRDPRASHNCWAYK 89

Query: 105 VGD-QFRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVA 164
           +GD   R +DDGEPSGTAGKPI SAI+SSG+DRVMVVVIRYFGGIKLGTGGLVRAYGGV 
Sbjct: 90  IGDHHHRCSDDGEPSGTAGKPIQSAILSSGLDRVMVVVIRYFGGIKLGTGGLVRAYGGVT 149

Query: 165 SECLKSAQTCVVKSKV 180
           S+CLK+A +C+VKSKV
Sbjct: 150 SDCLKTAPSCLVKSKV 165

The following BLAST results are available for this feature:

BLAST of Csor.00g059030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P32438	3.5e-31	48.55	IMPACT family member in pol 5'region (Fragment) OS=Thermus thermophilus OX=274 P...	[more]
P44842	1.3e-22	36.59	IMPACT family member HI_0722 OS=Haemophilus influenzae (strain ATCC 51907 / DSM ...	[more]
P32437	4.3e-21	40.13	IMPACT family member YvyE OS=Bacillus subtilis (strain 168) OX=224308 GN=yvyE PE...	[more]
P27862	6.2e-20	41.13	IMPACT family member YigZ OS=Escherichia coli (strain K12) OX=83333 GN=yigZ PE=1...	[more]

BLAST of Csor.00g059030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022950841.1	5.61e-177	100.00	uncharacterized protein LOC111453822 [Cucurbita moschata] >KAG6604060.1 hypothet...	[more]
KAG7034226.1	4.61e-176	99.19	hypothetical protein SDJN02_03953 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023543995.1	8.82e-175	99.19	uncharacterized protein LOC111803702 [Cucurbita pepo subsp. pepo]	[more]
XP_022978806.1	3.62e-171	97.59	uncharacterized protein LOC111478661 [Cucurbita maxima]	[more]
XP_022133126.1	5.23e-157	89.92	uncharacterized protein LOC111005799 [Momordica charantia]	[more]

BLAST of Csor.00g059030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GFX5	2.71e-177	100.00	uncharacterized protein LOC111453822 OS=Cucurbita moschata OX=3662 GN=LOC1114538...	[more]
A0A6J1IP23	1.75e-171	97.59	uncharacterized protein LOC111478661 OS=Cucurbita maxima OX=3661 GN=LOC111478661...	[more]
A0A6J1BU50	2.53e-157	89.92	uncharacterized protein LOC111005799 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A0A0KGN8	2.42e-155	89.11	UPF0029 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G499080 PE=...	[more]
A0A5D3CN06	9.87e-155	89.52	IMPACT family member in pol 5'region isoform X1 OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of Csor.00g059030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38090.1	7.4e-85	74.02	Ribosomal protein S5 domain 2-like superfamily protein	[more]
AT4G38090.4	2.9e-81	72.06	Ribosomal protein S5 domain 2-like superfamily protein	[more]
AT4G38090.2	1.9e-61	74.03	Ribosomal protein S5 domain 2-like superfamily protein	[more]
AT4G38090.3	3.9e-54	75.00	Ribosomal protein S5 domain 2-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036956	Impact, N-terminal domain superfamily	GENE3D	3.30.230.30		coord: 52..175 e-value: 2.4E-41 score: 142.2
IPR001498	Impact, N-terminal	PFAM	PF01205	UPF0029	coord: 67..167 e-value: 3.7E-26 score: 91.5
None	No IPR available	PANTHER	PTHR16301:SF20	IMPACT FAMILY MEMBER YIGZ	coord: 52..247
IPR023582	Impact family	PANTHER	PTHR16301	IMPACT-RELATED	coord: 52..247
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 53..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g059030.m01	Csor.00g059030.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006446	regulation of translational initiation
cellular_component	GO:0005840	ribosome