Csor.00g058920 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g058920
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Rhamnogalacturonan endolyase
Location	Csor_Chr03: 6877755 .. 6879126 (-)
RNA-Seq Expression	Csor.00g058920
Synteny	Csor.00g058920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGATTTGGAGTGGGAGAGGCATGGAAGAAGGTATTCGGACCGGTCTTCATTTATCTAAACTCGGATCCGGTCGGTTCTGGACCCGGTTCACTTTGGGAAGATGCTAAAAACCAGGTTTTTTTTTTTAATTTTTATGATCAGACCTTTATTTATAGGAAAAAAGGGGAAACTGAAAAATGGGTATAATTTAAAATCAGATGAGGATAGAGACAAGTAAGTGGCCATACAGCTTTGTTGGATCCACAGATTTTCCATCCTCAAACCAAAGAGGAACCGTAAGCGGTCGGTTATTAGTCCGAGATAGGTTCGTCTTTCTCCCCTTTACTTCCTTACGTTGTATTTTTCATGTCTCTGTCCTTTTAAGGTTCAACAATAAAATCCTGTCGACGTCATTTTTATTGGCAGACATGCTAAGAAGTGGTTGATGTGGGGCGATTCTGCGTATGTTGGCCTTGCAGCTCCCGGGGAATTGGGGTCTTGGCAAACAGAAAGCAAGGTCACATATAAATGGATAAATTATTGTATTTTCCATTAGATGGAAGTAATTGACCATTGTCTTCATTTTCATTGACAGGGATATCAGTTTTGGACACGGGCAGATGGGCAAGGATATTTCTCAATTAACAACATTAGGCCTGGAAACTACAATCTATACGCGTGGGTACCTGGTGTCATCGGTGATTACAAGTACGCCAATGACATCACTGTCACGTTGGGGAGTACCACCCGCCTCGGCTTACTCATATACGACCCTCCAAGACAAGGCCCAACTCTGTGGGAGATTGGCGTCCCAGACCGGACAGCCGCCGAGTTCTATATACCGGATCCCCAGCCCACCCTCATGAATCGCTTTTACAACAATTCTGATATCCATACCCCAGATAAGTTTCGACAGTACGGTCTTTGGGAGCGCTACGCCGAATTGTTTCCCCATCAAGATCTAGTCTACAACGTCGCCACCGATGACTACCGCCGACATTGGTTCTTCGCCCATGTCACCAGAGCCACCCGTTTCGGTACCTACCAAGCAACCACGTGGCAGATTGTGTTTCGTCTTCAAGGGCCCAAACAGAGCGGGAACTATATGCTTCGGTTGGCCTTGGCTTCCACTACCGAGGCGGTGGTCGAAATCCGGTTCAACAACCCGTTGGCCAGACGGGCTCATTTCTCGACCGGGTATTGGGCCTCAGGAAGGGATAACGCCATTGCTAGACATGGGATTCATGGGCTTTATTGGTTATTCAACTTCAAGGTTCCAAGTGGATATTTGGTCGAGGATGAAAACATTATCTATCTTACACAGAGACGACATATGGGACCCTTTCAAGGAGTGATGTACGATTACATACGGTTCGAAGGCGTACAATAA

mRNA sequence

ATGAGATTTGGAGTGGGAGAGGCATGGAAGAAGGTATTCGGACCGGTCTTCATTTATCTAAACTCGGATCCGGTCGGTTCTGGACCCGGTTCACTTTGGGAAGATGCTAAAAACCAGATGAGGATAGAGACAAGTAAGTGGCCATACAGCTTTGTTGGATCCACAGATTTTCCATCCTCAAACCAAAGAGGAACCGTAAGCGGTCGGTTATTAGTCCGAGATAGACATGCTAAGAAGTGGTTGATGTGGGGCGATTCTGCGTATGTTGGCCTTGCAGCTCCCGGGGAATTGGGGTCTTGGCAAACAGAAAGCAAGGGATATCAGTTTTGGACACGGGCAGATGGGCAAGGATATTTCTCAATTAACAACATTAGGCCTGGAAACTACAATCTATACGCGTGGGTACCTGGTGTCATCGGTGATTACAAGTACGCCAATGACATCACTGTCACGTTGGGGAGTACCACCCGCCTCGGCTTACTCATATACGACCCTCCAAGACAAGGCCCAACTCTGTGGGAGATTGGCGTCCCAGACCGGACAGCCGCCGAGTTCTATATACCGGATCCCCAGCCCACCCTCATGAATCGCTTTTACAACAATTCTGATATCCATACCCCAGATAAGTTTCGACAGTACGGTCTTTGGGAGCGCTACGCCGAATTGTTTCCCCATCAAGATCTAGTCTACAACGTCGCCACCGATGACTACCGCCGACATTGGTTCTTCGCCCATGTCACCAGAGCCACCCGTTTCGGTACCTACCAAGCAACCACGTGGCAGATTGTGTTTCGTCTTCAAGGGCCCAAACAGAGCGGGAACTATATGCTTCGGTTGGCCTTGGCTTCCACTACCGAGGCGGTGGTCGAAATCCGGTTCAACAACCCGTTGGCCAGACGGGCTCATTTCTCGACCGGGTATTGGGCCTCAGGAAGGGATAACGCCATTGCTAGACATGGGATTCATGGGCTTTATTGGTTATTCAACTTCAAGGTTCCAAGTGGATATTTGGTCGAGGATGAAAACATTATCTATCTTACACAGAGACGACATATGGGACCCTTTCAAGGAGTGATGTACGATTACATACGGTTCGAAGGCGTACAATAA

Coding sequence (CDS)

ATGAGATTTGGAGTGGGAGAGGCATGGAAGAAGGTATTCGGACCGGTCTTCATTTATCTAAACTCGGATCCGGTCGGTTCTGGACCCGGTTCACTTTGGGAAGATGCTAAAAACCAGATGAGGATAGAGACAAGTAAGTGGCCATACAGCTTTGTTGGATCCACAGATTTTCCATCCTCAAACCAAAGAGGAACCGTAAGCGGTCGGTTATTAGTCCGAGATAGACATGCTAAGAAGTGGTTGATGTGGGGCGATTCTGCGTATGTTGGCCTTGCAGCTCCCGGGGAATTGGGGTCTTGGCAAACAGAAAGCAAGGGATATCAGTTTTGGACACGGGCAGATGGGCAAGGATATTTCTCAATTAACAACATTAGGCCTGGAAACTACAATCTATACGCGTGGGTACCTGGTGTCATCGGTGATTACAAGTACGCCAATGACATCACTGTCACGTTGGGGAGTACCACCCGCCTCGGCTTACTCATATACGACCCTCCAAGACAAGGCCCAACTCTGTGGGAGATTGGCGTCCCAGACCGGACAGCCGCCGAGTTCTATATACCGGATCCCCAGCCCACCCTCATGAATCGCTTTTACAACAATTCTGATATCCATACCCCAGATAAGTTTCGACAGTACGGTCTTTGGGAGCGCTACGCCGAATTGTTTCCCCATCAAGATCTAGTCTACAACGTCGCCACCGATGACTACCGCCGACATTGGTTCTTCGCCCATGTCACCAGAGCCACCCGTTTCGGTACCTACCAAGCAACCACGTGGCAGATTGTGTTTCGTCTTCAAGGGCCCAAACAGAGCGGGAACTATATGCTTCGGTTGGCCTTGGCTTCCACTACCGAGGCGGTGGTCGAAATCCGGTTCAACAACCCGTTGGCCAGACGGGCTCATTTCTCGACCGGGTATTGGGCCTCAGGAAGGGATAACGCCATTGCTAGACATGGGATTCATGGGCTTTATTGGTTATTCAACTTCAAGGTTCCAAGTGGATATTTGGTCGAGGATGAAAACATTATCTATCTTACACAGAGACGACATATGGGACCCTTTCAAGGAGTGATGTACGATTACATACGGTTCGAAGGCGTACAATAA

Protein sequence

MRFGVGEAWKKVFGPVFIYLNSDPVGSGPGSLWEDAKNQMRIETSKWPYSFVGSTDFPSSNQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGSWQTESKGYQFWTRADGQGYFSINNIRPGNYNLYAWVPGVIGDYKYANDITVTLGSTTRLGLLIYDPPRQGPTLWEIGVPDRTAAEFYIPDPQPTLMNRFYNNSDIHTPDKFRQYGLWERYAELFPHQDLVYNVATDDYRRHWFFAHVTRATRFGTYQATTWQIVFRLQGPKQSGNYMLRLALASTTEAVVEIRFNNPLARRAHFSTGYWASGRDNAIARHGIHGLYWLFNFKVPSGYLVEDENIIYLTQRRHMGPFQGVMYDYIRFEGVQ

Homology

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BLAST of Csor.00g058920 vs. ExPASy Swiss-Prot
Match: Q8RJP2 (Rhamnogalacturonate lyase OS=Dickeya dadantii (strain 3937) OX=198628 GN=rhiE PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.6e-19
Identity = 100/363 (27.55%), Postives = 145/363 (39.94%), Query Frame = 0


Query: 9   WKKVFGPVFIYLNSDPVGSGPGSLWEDAKNQMRIETSKWPYSFVGSTDFPSSNQRGTVSG 68
           ++K++GP  +Y+N          L  D   +   E + WPY ++    +P   QR TVSG
Sbjct: 274 FEKLYGPWLLYINQ----GNDRELVADVSRRAEHERASWPYRWLDDARYP--RQRATVSG 333

Query: 69  RLLVRDRHAKKWLMWGDSAYVGLAAPGELGSWQTESKGYQFWTRADGQGYFSINNIRPGN 128
           RL     HA           V L +  E  ++  ++ GY F  R +  G FS++N+ PG 
Sbjct: 334 RLRTEAPHAT----------VVLNSSAE--NFDIQTTGYLFSARTNRDGRFSLSNVPPGE 393

Query: 129 YNLYAWVPGVIGDYKYANDITVTLGSTTRLGLLIYDPPRQGPTLWEIGVPDRTAAEFYIP 188
           Y L A+  G       A       G  TRLG +  D  +  P  W IG  DR A EF   
Sbjct: 394 YRLSAYADGGTQIGLLAQQTVRVEGKKTRLGQI--DARQPAPLAWAIGQADRRADEF--- 453

Query: 189 DPQPTLMNRFYNNSDIHTPDKFRQYGLWERYAELFPHQDLVYNVATDDYRRHWFFAHVTR 248
                   RF         DK RQY    R+    P  DL + +     R+ W++A    
Sbjct: 454 --------RF--------GDKPRQY----RWQTEVP-ADLTFEIGKSRERKDWYYAQT-- 513

Query: 249 ATRFGTYQATTWQIVFRLQGPKQSGNYMLRLALAS----TTEA---VVEIRFNNPLARRA 308
                  Q  +W I+F  + P+Q     + +A AS    TT A    + ++ N  L    
Sbjct: 514 -------QPGSWHILFNTRTPEQPYTLNIAIAAASNNGMTTPASSPQLAVKLNGQLLTTL 571

Query: 309 HFSTGYWASGRDNAIARHGIH-GLYWLFNFKVPSGYLVEDENIIYLTQRRHMGPFQGVMY 364
            +         D +I R  +  G Y   +  +P+G L +  N I L     M     VMY
Sbjct: 574 KYD-------NDKSIYRGAMQSGRYHEAHIPLPAGALQQGGNRITLELLGGM-----VMY 571

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BLAST of Csor.00g058920 vs. ExPASy Swiss-Prot
Match: A5ABH4 (Probable rhamnogalacturonate lyase B OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rglB PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 6.0e-11
Identity = 55/236 (23.31%), Postives = 97/236 (41.10%), Query Frame = 0


Query: 11  KVFGPVFIYLNSDPVGSG-PGSLWEDAKNQMRIETSKWPYSFVGS-----TDFPSSNQRG 70
           + FGP + + N    G G   SL E   +   +    W   F  S       +  S+QRG
Sbjct: 292 RTFGPQYYHFNG---GKGSTASLQELKSDAETLADPSWNVDFYDSIAKHVVGYTPSSQRG 351

Query: 71  TVSGRL-LVRDRHAKKWLMWGDSAYVGLAAPGELGSWQTESKGYQFWTRADGQGYFSINN 130
           +V G++ L +       ++  D  Y               S  YQ+W   D  G+FS+++
Sbjct: 352 SVQGKIKLPKGATRPIAVLTVDGQY--------FQDNSVNSSSYQYWAEIDDSGHFSVDH 411

Query: 131 IRPGNYNLYAWVPGVIGDYKYANDITVTLGSTTRLGLLIYDPPRQGPTLWEIGVPDRTAA 190
           ++ G Y L  +  G+ GD+   + + V  G  T +    ++    G  +W +G PD+++ 
Sbjct: 412 VKEGPYRLTVYADGIFGDF-VRDGVQVKAGKKTTI-QETWEAESAGTEIWRLGTPDKSSG 471

Query: 191 EF---YIPDPQPTLMNRFYNNSDIHTPDKFRQYGLWERYAELFPHQDLVYNVATDD 237
           EF      DP             +H P+    +G ++  ++ FP   + Y + T D
Sbjct: 472 EFRHGVARDP----------THPLHPPEYLIYWGAYDWQSD-FP-DGINYTIGTSD 502

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BLAST of Csor.00g058920 vs. ExPASy Swiss-Prot
Match: Q5AZ85 (Rhamnogalacturonate lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rglB PE=2 SV=2)

HSP 1 Score: 67.0 bits (162), Expect = 5.1e-10
Identity = 50/189 (26.46%), Postives = 79/189 (41.80%), Query Frame = 0


Query: 5   VGEAWKKVFGPVFIYLNSDPVGSGPGSLWEDAKNQMRIETSKWPYSFVGS-----TDFPS 64
           +   + + FGP F   N    G G  SL E       + +  W   F  S       +  
Sbjct: 285 ITNGFDRTFGPQFYLFN----GGGSSSLEELRDEARSLASPSWNADFYDSIAKHVIGYVP 344

Query: 65  SNQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGSWQTES---KGYQFWTRADGQ 124
           S+QRG+V G + +  ++AK       S    L   G    +Q  S     +Q+W   D  
Sbjct: 345 SSQRGSVKGTIKL-PKNAK-------SPIAVLTVDGHY--FQDNSAVPSSHQYWADIDKN 404

Query: 125 GYFSINNIRPGNYNLYAWVPGVIGDYKYANDITVTLGSTTRLGLLIYDPPRQGPTLWEIG 184
           G FSI+ +  G Y L  +  G+ GD+   + I V    +T +    + P   G  +W +G
Sbjct: 405 GRFSIDRVVAGKYRLTVYADGIFGDFT-RDGIVVKARKSTSI-KETWKPESAGTEIWRLG 457

Query: 185 VPDRTAAEF 186
            PD+++ EF
Sbjct: 465 TPDKSSGEF 457

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BLAST of Csor.00g058920 vs. NCBI nr
Match: KAG6604071.1 (hypothetical protein SDJN03_04680, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 788 bits (2035), Expect = 1.89e-288
Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0


Query: 1   MRFGVGEAWKKVFGPVFIYLNSDPVGSGPGSLWEDAKNQMRIETSKWPYSFVGSTDFPSS 60
           MRFGVGEAWKKVFGPVFIYLNSDPVGSGPGSLWEDAKNQMRIETSKWPYSFVGSTDFPSS
Sbjct: 1   MRFGVGEAWKKVFGPVFIYLNSDPVGSGPGSLWEDAKNQMRIETSKWPYSFVGSTDFPSS 60

Query: 61  NQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGSWQTESKGYQFWTRADGQGYFS 120
           NQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGSWQTESKGYQFWTRADGQGYFS
Sbjct: 61  NQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGSWQTESKGYQFWTRADGQGYFS 120

Query: 121 INNIRPGNYNLYAWVPGVIGDYKYANDITVTLGSTTRLGLLIYDPPRQGPTLWEIGVPDR 180
           INNIRPGNYNLYAWVPGVIGDYKYANDITVTLGSTTRLGLLIYDPPRQGPTLWEIGVPDR
Sbjct: 121 INNIRPGNYNLYAWVPGVIGDYKYANDITVTLGSTTRLGLLIYDPPRQGPTLWEIGVPDR 180

Query: 181 TAAEFYIPDPQPTLMNRFYNNSDIHTPDKFRQYGLWERYAELFPHQDLVYNVATDDYRRH 240
           TAAEFYIPDPQPTLMNRFYNNSDIHTPDKFRQYGLWERYAELFPHQDLVYNVATDDYRRH
Sbjct: 181 TAAEFYIPDPQPTLMNRFYNNSDIHTPDKFRQYGLWERYAELFPHQDLVYNVATDDYRRH 240

Query: 241 WFFAHVTRATRFGTYQATTWQIVFRLQGPKQSGNYMLRLALASTTEAVVEIRFNNPLARR 300
           WFFAHVTRATRFGTYQATTWQIVFRLQGPKQSGNYMLRLALASTTEAVVEIRFNNPLARR
Sbjct: 241 WFFAHVTRATRFGTYQATTWQIVFRLQGPKQSGNYMLRLALASTTEAVVEIRFNNPLARR 300

Query: 301 AHFSTGYWASGRDNAIARHGIHGLYWLFNFKVPSGYLVEDENIIYLTQRRHMGPFQGVMY 360
           AHFSTGYWASGRDNAIARHGIHGLYWLFNFKVPSGYLVEDENIIYLTQRRHMGPFQGVMY
Sbjct: 301 AHFSTGYWASGRDNAIARHGIHGLYWLFNFKVPSGYLVEDENIIYLTQRRHMGPFQGVMY 360

Query: 361 DYIRFEGVQ 369
           DYIRFEGVQ
Sbjct: 361 DYIRFEGVQ 369

[Close]

BLAST of Csor.00g058920 vs. NCBI nr
Match: KAG7034239.1 (rhiE, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 781 bits (2017), Expect = 1.46e-280
Identity = 366/369 (99.19%), Postives = 366/369 (99.19%), Query Frame = 0


Query: 1   MRFGVGEAWKKVFGPVFIYLNSDPVGSGPGSLWEDAKNQMRIETSKWPYSFVGSTDFPSS 60
           MRFGVGEAWKKVFGPVFIYLNSDPVGSG GSLWEDAKNQMRIETSKWPYSFVGSTDFPSS
Sbjct: 322 MRFGVGEAWKKVFGPVFIYLNSDPVGSGTGSLWEDAKNQMRIETSKWPYSFVGSTDFPSS 381

Query: 61  NQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGSWQTESKGYQFWTRADGQGYFS 120
           NQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGSWQTESKGYQFWTRADGQGYFS
Sbjct: 382 NQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGSWQTESKGYQFWTRADGQGYFS 441

Query: 121 INNIRPGNYNLYAWVPGVIGDYKYANDITVTLGSTTRLGLLIYDPPRQGPTLWEIGVPDR 180
           INNIRPGNYNLYAWVPGVIGDYKYANDITVTLGSTTRLGLLIYDPPRQGPTLWEIGVPDR
Sbjct: 442 INNIRPGNYNLYAWVPGVIGDYKYANDITVTLGSTTRLGLLIYDPPRQGPTLWEIGVPDR 501

Query: 181 TAAEFYIPDPQPTLMNRFYNNSDIHTPDKFRQYGLWERYAELFPHQDLVYNVATDDYRRH 240
           TAAEFYIPDPQPTLMNRFYNNSDIHTPDKFRQYGLWERYAELFPHQDLVYNVATDDYRRH
Sbjct: 502 TAAEFYIPDPQPTLMNRFYNNSDIHTPDKFRQYGLWERYAELFPHQDLVYNVATDDYRRH 561

Query: 241 WFFAHVTRATRFGTYQATTWQIVFRLQGPKQSGNYMLRLALASTTEAVVEIRFNNPLARR 300
           WFFAHVTR TRFGTYQATTWQIVFRLQGPKQSGNY LRLALASTTEAVVEIRFNNPLARR
Sbjct: 562 WFFAHVTRGTRFGTYQATTWQIVFRLQGPKQSGNYTLRLALASTTEAVVEIRFNNPLARR 621

Query: 301 AHFSTGYWASGRDNAIARHGIHGLYWLFNFKVPSGYLVEDENIIYLTQRRHMGPFQGVMY 360
           AHFSTGYWASGRDNAIARHGIHGLYWLFNFKVPSGYLVEDENIIYLTQRRHMGPFQGVMY
Sbjct: 622 AHFSTGYWASGRDNAIARHGIHGLYWLFNFKVPSGYLVEDENIIYLTQRRHMGPFQGVMY 681

Query: 361 DYIRFEGVQ 369
           DYIRFEGVQ
Sbjct: 682 DYIRFEGVQ 690

[Close]

BLAST of Csor.00g058920 vs. NCBI nr
Match: XP_022978916.1 (uncharacterized protein LOC111478723 [Cucurbita maxima])

HSP 1 Score: 769 bits (1986), Expect = 2.98e-275
Identity = 359/369 (97.29%), Postives = 363/369 (98.37%), Query Frame = 0


Query: 1   MRFGVGEAWKKVFGPVFIYLNSDPVGSGPGSLWEDAKNQMRIETSKWPYSFVGSTDFPSS 60
           MRFG GEAWKKVFGPVFIYLNS PVG+GPG LWEDAKNQMRIETS+WPYSFVGSTDFPSS
Sbjct: 361 MRFGEGEAWKKVFGPVFIYLNSGPVGTGPGLLWEDAKNQMRIETSRWPYSFVGSTDFPSS 420

Query: 61  NQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGSWQTESKGYQFWTRADGQGYFS 120
           NQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGSWQTESKGYQFWTRADGQGYFS
Sbjct: 421 NQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGSWQTESKGYQFWTRADGQGYFS 480

Query: 121 INNIRPGNYNLYAWVPGVIGDYKYANDITVTLGSTTRLGLLIYDPPRQGPTLWEIGVPDR 180
           INNIRPGNYNLYAW+PGVIGDYKYANDITVTLGSTTRLGLLIYDPPRQGPTLWEIGVPDR
Sbjct: 481 INNIRPGNYNLYAWIPGVIGDYKYANDITVTLGSTTRLGLLIYDPPRQGPTLWEIGVPDR 540

Query: 181 TAAEFYIPDPQPTLMNRFYNNSDIHTPDKFRQYGLWERYAELFPHQDLVYNVATDDYRRH 240
           TAAEFYIPDP PTLMNRFYNNSDIHTPDKFRQYGLWERYAELFP QDLVYNVATDDYRRH
Sbjct: 541 TAAEFYIPDPHPTLMNRFYNNSDIHTPDKFRQYGLWERYAELFPRQDLVYNVATDDYRRH 600

Query: 241 WFFAHVTRATRFGTYQATTWQIVFRLQGPKQSGNYMLRLALASTTEAVVEIRFNNPLARR 300
           WFFAHVTRATRFGTYQATTWQIVFRLQGPKQSGNYMLRLALASTTEAVVEIRFNNPLARR
Sbjct: 601 WFFAHVTRATRFGTYQATTWQIVFRLQGPKQSGNYMLRLALASTTEAVVEIRFNNPLARR 660

Query: 301 AHFSTGYWASGRDNAIARHGIHGLYWLFNFKVPSGYLVEDENIIYLTQRRHMGPFQGVMY 360
           AHF TGYWASGRDNAIARHGIHGLYWLFNF+VPSGYLVEDENIIYLTQRRHMGPFQGVMY
Sbjct: 661 AHFLTGYWASGRDNAIARHGIHGLYWLFNFQVPSGYLVEDENIIYLTQRRHMGPFQGVMY 720

Query: 361 DYIRFEGVQ 369
           DYIRFEGVQ
Sbjct: 721 DYIRFEGVQ 729

[Close]

BLAST of Csor.00g058920 vs. NCBI nr
Match: XP_023543064.1 (uncharacterized protein LOC111803045 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 702 bits (1812), Expect = 1.52e-250
Identity = 329/330 (99.70%), Postives = 330/330 (100.00%), Query Frame = 0


Query: 40  MRIETSKWPYSFVGSTDFPSSNQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGS 99
           MRIETSKWPYSFVGSTDFPSSNQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGS
Sbjct: 286 MRIETSKWPYSFVGSTDFPSSNQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGS 345

Query: 100 WQTESKGYQFWTRADGQGYFSINNIRPGNYNLYAWVPGVIGDYKYANDITVTLGSTTRLG 159
           WQTESKGYQFWTRADGQGYFSINNIRPGNYNLYAWVPGVIGDYKYANDITVTLGSTTRLG
Sbjct: 346 WQTESKGYQFWTRADGQGYFSINNIRPGNYNLYAWVPGVIGDYKYANDITVTLGSTTRLG 405

Query: 160 LLIYDPPRQGPTLWEIGVPDRTAAEFYIPDPQPTLMNRFYNNSDIHTPDKFRQYGLWERY 219
           LLIYDPPRQGPTLWEIGVPDRTAAEFYIPDPQPTLMNRFYNNSDIH+PDKFRQYGLWERY
Sbjct: 406 LLIYDPPRQGPTLWEIGVPDRTAAEFYIPDPQPTLMNRFYNNSDIHSPDKFRQYGLWERY 465

Query: 220 AELFPHQDLVYNVATDDYRRHWFFAHVTRATRFGTYQATTWQIVFRLQGPKQSGNYMLRL 279
           AELFPHQDLVYNVATDDYRRHWFFAHVTRATRFGTYQATTWQIVFRLQGPKQSGNYMLRL
Sbjct: 466 AELFPHQDLVYNVATDDYRRHWFFAHVTRATRFGTYQATTWQIVFRLQGPKQSGNYMLRL 525

Query: 280 ALASTTEAVVEIRFNNPLARRAHFSTGYWASGRDNAIARHGIHGLYWLFNFKVPSGYLVE 339
           ALASTTEAVVEIRFNNPLARRAHFSTGYWASGRDNAIARHGIHGLYWLFNFKVPSGYLVE
Sbjct: 526 ALASTTEAVVEIRFNNPLARRAHFSTGYWASGRDNAIARHGIHGLYWLFNFKVPSGYLVE 585

Query: 340 DENIIYLTQRRHMGPFQGVMYDYIRFEGVQ 369
           DENIIYLTQRRHMGPFQGVMYDYIRFEGVQ
Sbjct: 586 DENIIYLTQRRHMGPFQGVMYDYIRFEGVQ 615

[Close]

BLAST of Csor.00g058920 vs. NCBI nr
Match: XP_022950941.1 (uncharacterized protein LOC111453886 [Cucurbita moschata])

HSP 1 Score: 701 bits (1809), Expect = 9.80e-250
Identity = 329/330 (99.70%), Postives = 329/330 (99.70%), Query Frame = 0


Query: 40  MRIETSKWPYSFVGSTDFPSSNQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGS 99
           MRIETSKWPYSFVGSTDFPSSNQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGS
Sbjct: 309 MRIETSKWPYSFVGSTDFPSSNQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGS 368

Query: 100 WQTESKGYQFWTRADGQGYFSINNIRPGNYNLYAWVPGVIGDYKYANDITVTLGSTTRLG 159
           WQTESKGYQFWTRADGQGYFSINNIRPGNYNLYAWVPGVIGDYKYANDITVTLGSTTRLG
Sbjct: 369 WQTESKGYQFWTRADGQGYFSINNIRPGNYNLYAWVPGVIGDYKYANDITVTLGSTTRLG 428

Query: 160 LLIYDPPRQGPTLWEIGVPDRTAAEFYIPDPQPTLMNRFYNNSDIHTPDKFRQYGLWERY 219
           LLIYDPPRQGPTLWEIGVPDRTAAEFYIPDPQPTLMNRFYNNSDIHTPDKFRQYGLWERY
Sbjct: 429 LLIYDPPRQGPTLWEIGVPDRTAAEFYIPDPQPTLMNRFYNNSDIHTPDKFRQYGLWERY 488

Query: 220 AELFPHQDLVYNVATDDYRRHWFFAHVTRATRFGTYQATTWQIVFRLQGPKQSGNYMLRL 279
           AELFPHQDLVYNVATDDYRRHWFFAHVTRATRFGTYQATTWQIVFRLQGPKQSGNYMLRL
Sbjct: 489 AELFPHQDLVYNVATDDYRRHWFFAHVTRATRFGTYQATTWQIVFRLQGPKQSGNYMLRL 548

Query: 280 ALASTTEAVVEIRFNNPLARRAHFSTGYWASGRDNAIARHGIHGLYWLFNFKVPSGYLVE 339
           ALASTTEAVVEIRFNNPLAR AHFSTGYWASGRDNAIARHGIHGLYWLFNFKVPSGYLVE
Sbjct: 549 ALASTTEAVVEIRFNNPLARGAHFSTGYWASGRDNAIARHGIHGLYWLFNFKVPSGYLVE 608

Query: 340 DENIIYLTQRRHMGPFQGVMYDYIRFEGVQ 369
           DENIIYLTQRRHMGPFQGVMYDYIRFEGVQ
Sbjct: 609 DENIIYLTQRRHMGPFQGVMYDYIRFEGVQ 638

[Close]

BLAST of Csor.00g058920 vs. ExPASy TrEMBL
Match: A0A6J1IPB6 (Rhamnogalacturonan endolyase OS=Cucurbita maxima OX=3661 GN=LOC111478723 PE=3 SV=1)

HSP 1 Score: 769 bits (1986), Expect = 1.44e-275
Identity = 359/369 (97.29%), Postives = 363/369 (98.37%), Query Frame = 0


Query: 1   MRFGVGEAWKKVFGPVFIYLNSDPVGSGPGSLWEDAKNQMRIETSKWPYSFVGSTDFPSS 60
           MRFG GEAWKKVFGPVFIYLNS PVG+GPG LWEDAKNQMRIETS+WPYSFVGSTDFPSS
Sbjct: 361 MRFGEGEAWKKVFGPVFIYLNSGPVGTGPGLLWEDAKNQMRIETSRWPYSFVGSTDFPSS 420

Query: 61  NQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGSWQTESKGYQFWTRADGQGYFS 120
           NQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGSWQTESKGYQFWTRADGQGYFS
Sbjct: 421 NQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGSWQTESKGYQFWTRADGQGYFS 480

Query: 121 INNIRPGNYNLYAWVPGVIGDYKYANDITVTLGSTTRLGLLIYDPPRQGPTLWEIGVPDR 180
           INNIRPGNYNLYAW+PGVIGDYKYANDITVTLGSTTRLGLLIYDPPRQGPTLWEIGVPDR
Sbjct: 481 INNIRPGNYNLYAWIPGVIGDYKYANDITVTLGSTTRLGLLIYDPPRQGPTLWEIGVPDR 540

Query: 181 TAAEFYIPDPQPTLMNRFYNNSDIHTPDKFRQYGLWERYAELFPHQDLVYNVATDDYRRH 240
           TAAEFYIPDP PTLMNRFYNNSDIHTPDKFRQYGLWERYAELFP QDLVYNVATDDYRRH
Sbjct: 541 TAAEFYIPDPHPTLMNRFYNNSDIHTPDKFRQYGLWERYAELFPRQDLVYNVATDDYRRH 600

Query: 241 WFFAHVTRATRFGTYQATTWQIVFRLQGPKQSGNYMLRLALASTTEAVVEIRFNNPLARR 300
           WFFAHVTRATRFGTYQATTWQIVFRLQGPKQSGNYMLRLALASTTEAVVEIRFNNPLARR
Sbjct: 601 WFFAHVTRATRFGTYQATTWQIVFRLQGPKQSGNYMLRLALASTTEAVVEIRFNNPLARR 660

Query: 301 AHFSTGYWASGRDNAIARHGIHGLYWLFNFKVPSGYLVEDENIIYLTQRRHMGPFQGVMY 360
           AHF TGYWASGRDNAIARHGIHGLYWLFNF+VPSGYLVEDENIIYLTQRRHMGPFQGVMY
Sbjct: 661 AHFLTGYWASGRDNAIARHGIHGLYWLFNFQVPSGYLVEDENIIYLTQRRHMGPFQGVMY 720

Query: 361 DYIRFEGVQ 369
           DYIRFEGVQ
Sbjct: 721 DYIRFEGVQ 729

[Close]

BLAST of Csor.00g058920 vs. ExPASy TrEMBL
Match: A0A6J1GG74 (Rhamnogalacturonan endolyase OS=Cucurbita moschata OX=3662 GN=LOC111453886 PE=3 SV=1)

HSP 1 Score: 701 bits (1809), Expect = 4.74e-250
Identity = 329/330 (99.70%), Postives = 329/330 (99.70%), Query Frame = 0


Query: 40  MRIETSKWPYSFVGSTDFPSSNQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGS 99
           MRIETSKWPYSFVGSTDFPSSNQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGS
Sbjct: 309 MRIETSKWPYSFVGSTDFPSSNQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGS 368

Query: 100 WQTESKGYQFWTRADGQGYFSINNIRPGNYNLYAWVPGVIGDYKYANDITVTLGSTTRLG 159
           WQTESKGYQFWTRADGQGYFSINNIRPGNYNLYAWVPGVIGDYKYANDITVTLGSTTRLG
Sbjct: 369 WQTESKGYQFWTRADGQGYFSINNIRPGNYNLYAWVPGVIGDYKYANDITVTLGSTTRLG 428

Query: 160 LLIYDPPRQGPTLWEIGVPDRTAAEFYIPDPQPTLMNRFYNNSDIHTPDKFRQYGLWERY 219
           LLIYDPPRQGPTLWEIGVPDRTAAEFYIPDPQPTLMNRFYNNSDIHTPDKFRQYGLWERY
Sbjct: 429 LLIYDPPRQGPTLWEIGVPDRTAAEFYIPDPQPTLMNRFYNNSDIHTPDKFRQYGLWERY 488

Query: 220 AELFPHQDLVYNVATDDYRRHWFFAHVTRATRFGTYQATTWQIVFRLQGPKQSGNYMLRL 279
           AELFPHQDLVYNVATDDYRRHWFFAHVTRATRFGTYQATTWQIVFRLQGPKQSGNYMLRL
Sbjct: 489 AELFPHQDLVYNVATDDYRRHWFFAHVTRATRFGTYQATTWQIVFRLQGPKQSGNYMLRL 548

Query: 280 ALASTTEAVVEIRFNNPLARRAHFSTGYWASGRDNAIARHGIHGLYWLFNFKVPSGYLVE 339
           ALASTTEAVVEIRFNNPLAR AHFSTGYWASGRDNAIARHGIHGLYWLFNFKVPSGYLVE
Sbjct: 549 ALASTTEAVVEIRFNNPLARGAHFSTGYWASGRDNAIARHGIHGLYWLFNFKVPSGYLVE 608

Query: 340 DENIIYLTQRRHMGPFQGVMYDYIRFEGVQ 369
           DENIIYLTQRRHMGPFQGVMYDYIRFEGVQ
Sbjct: 609 DENIIYLTQRRHMGPFQGVMYDYIRFEGVQ 638

[Close]

BLAST of Csor.00g058920 vs. ExPASy TrEMBL
Match: A0A5D3CNX4 (Rhamnogalacturonan endolyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003420 PE=3 SV=1)

HSP 1 Score: 627 bits (1618), Expect = 2.32e-221
Identity = 293/371 (78.98%), Postives = 325/371 (87.60%), Query Frame = 0


Query: 1   MRFGVGEAWKKVFGPVFIYLNSDPVGS-GPGSLWEDAKNQMRIETSKWPYSFVGSTDFPS 60
           MRF  GEAWKKVFGPVF YLNSDP G+  PGSLWEDAKNQM IETS+WPY+FV S +FPS
Sbjct: 246 MRFREGEAWKKVFGPVFTYLNSDPTGTDNPGSLWEDAKNQMTIETSRWPYNFVESREFPS 305

Query: 61  SNQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGSWQTESKGYQFWTRADGQGYF 120
           S+QRG++ G+LLVRDR+AK   MW DSAYVGLAAPGELGSWQ ESKGYQFWTRAD  GYF
Sbjct: 306 SDQRGSLRGQLLVRDRYAKYPQMWADSAYVGLAAPGELGSWQRESKGYQFWTRADEHGYF 365

Query: 121 SINNIRPGNYNLYAWVPGVIGDYKYANDITVTLGSTTRLGLLIYDPPRQGPTLWEIGVPD 180
           SI+NIR G YNLYAWVPGV+GDYKY  +IT+T  S+T L LL++DPPRQGPTLWEIG+PD
Sbjct: 366 SIDNIRSGTYNLYAWVPGVLGDYKYDKEITITPRSSTNLNLLVFDPPRQGPTLWEIGIPD 425

Query: 181 RTAAEFYIPDPQPTLMNRFYNNSDIHT-PDKFRQYGLWERYAELFPHQDLVYNVATDDYR 240
           R AAEFYIP P+PTLMNRFYN+S IH   D FRQYGLWERYAEL+PHQDLVYNV TDDYR
Sbjct: 426 RKAAEFYIPSPRPTLMNRFYNDSKIHIHDDNFRQYGLWERYAELYPHQDLVYNVDTDDYR 485

Query: 241 RHWFFAHVTRATRFGTYQATTWQIVFRLQGPKQSGNYMLRLALASTTEAVVEIRFNNPLA 300
           R+WFFAHVTRAT  G Y+ATTWQIVFRLQ PK+ GNYMLRLALAS+TEAV++IRFNNP  
Sbjct: 486 RNWFFAHVTRATNSGIYEATTWQIVFRLQRPKKIGNYMLRLALASSTEAVIDIRFNNPST 545

Query: 301 RRAHFSTGYWASGRDNAIARHGIHGLYWLFNFKVPSGYLVEDENIIYLTQRRHMGPFQGV 360
           +R HF+TGYW+SG+DNAIARHGIHGLYWLFNFKVPS YLVE EN+IYLTQRRH G FQGV
Sbjct: 546 KRTHFTTGYWSSGKDNAIARHGIHGLYWLFNFKVPSQYLVEGENVIYLTQRRHTGAFQGV 605

Query: 361 MYDYIRFEGVQ 369
           MYDYIRFE V+
Sbjct: 606 MYDYIRFEDVE 616

[Close]

BLAST of Csor.00g058920 vs. ExPASy TrEMBL
Match: A0A1S3B219 (Rhamnogalacturonan endolyase OS=Cucumis melo OX=3656 GN=LOC103484918 PE=3 SV=1)

HSP 1 Score: 627 bits (1618), Expect = 3.06e-221
Identity = 293/371 (78.98%), Postives = 325/371 (87.60%), Query Frame = 0


Query: 1   MRFGVGEAWKKVFGPVFIYLNSDPVGS-GPGSLWEDAKNQMRIETSKWPYSFVGSTDFPS 60
           MRF  GEAWKKVFGPVF YLNSDP G+  PGSLWEDAKNQM IETS+WPY+FV S +FPS
Sbjct: 254 MRFREGEAWKKVFGPVFTYLNSDPTGTDNPGSLWEDAKNQMTIETSRWPYNFVESREFPS 313

Query: 61  SNQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGSWQTESKGYQFWTRADGQGYF 120
           S+QRG++ G+LLVRDR+AK   MW DSAYVGLAAPGELGSWQ ESKGYQFWTRAD  GYF
Sbjct: 314 SDQRGSLRGQLLVRDRYAKYPQMWADSAYVGLAAPGELGSWQRESKGYQFWTRADEHGYF 373

Query: 121 SINNIRPGNYNLYAWVPGVIGDYKYANDITVTLGSTTRLGLLIYDPPRQGPTLWEIGVPD 180
           SI+NIR G YNLYAWVPGV+GDYKY  +IT+T  S+T L LL++DPPRQGPTLWEIG+PD
Sbjct: 374 SIDNIRSGTYNLYAWVPGVLGDYKYDKEITITPRSSTNLNLLVFDPPRQGPTLWEIGIPD 433

Query: 181 RTAAEFYIPDPQPTLMNRFYNNSDIHT-PDKFRQYGLWERYAELFPHQDLVYNVATDDYR 240
           R AAEFYIP P+PTLMNRFYN+S IH   D FRQYGLWERYAEL+PHQDLVYNV TDDYR
Sbjct: 434 RKAAEFYIPSPRPTLMNRFYNDSKIHIHDDNFRQYGLWERYAELYPHQDLVYNVDTDDYR 493

Query: 241 RHWFFAHVTRATRFGTYQATTWQIVFRLQGPKQSGNYMLRLALASTTEAVVEIRFNNPLA 300
           R+WFFAHVTRAT  G Y+ATTWQIVFRLQ PK+ GNYMLRLALAS+TEAV++IRFNNP  
Sbjct: 494 RNWFFAHVTRATNSGIYEATTWQIVFRLQRPKKIGNYMLRLALASSTEAVIDIRFNNPST 553

Query: 301 RRAHFSTGYWASGRDNAIARHGIHGLYWLFNFKVPSGYLVEDENIIYLTQRRHMGPFQGV 360
           +R HF+TGYW+SG+DNAIARHGIHGLYWLFNFKVPS YLVE EN+IYLTQRRH G FQGV
Sbjct: 554 KRTHFTTGYWSSGKDNAIARHGIHGLYWLFNFKVPSQYLVEGENVIYLTQRRHTGAFQGV 613

Query: 361 MYDYIRFEGVQ 369
           MYDYIRFE V+
Sbjct: 614 MYDYIRFEDVE 624

[Close]

BLAST of Csor.00g058920 vs. ExPASy TrEMBL
Match: A0A1S3B1X3 (Rhamnogalacturonan endolyase OS=Cucumis melo OX=3656 GN=LOC103484918 PE=3 SV=1)

HSP 1 Score: 627 bits (1618), Expect = 3.53e-220
Identity = 293/371 (78.98%), Postives = 325/371 (87.60%), Query Frame = 0


Query: 1   MRFGVGEAWKKVFGPVFIYLNSDPVGS-GPGSLWEDAKNQMRIETSKWPYSFVGSTDFPS 60
           MRF  GEAWKKVFGPVF YLNSDP G+  PGSLWEDAKNQM IETS+WPY+FV S +FPS
Sbjct: 326 MRFREGEAWKKVFGPVFTYLNSDPTGTDNPGSLWEDAKNQMTIETSRWPYNFVESREFPS 385

Query: 61  SNQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGSWQTESKGYQFWTRADGQGYF 120
           S+QRG++ G+LLVRDR+AK   MW DSAYVGLAAPGELGSWQ ESKGYQFWTRAD  GYF
Sbjct: 386 SDQRGSLRGQLLVRDRYAKYPQMWADSAYVGLAAPGELGSWQRESKGYQFWTRADEHGYF 445

Query: 121 SINNIRPGNYNLYAWVPGVIGDYKYANDITVTLGSTTRLGLLIYDPPRQGPTLWEIGVPD 180
           SI+NIR G YNLYAWVPGV+GDYKY  +IT+T  S+T L LL++DPPRQGPTLWEIG+PD
Sbjct: 446 SIDNIRSGTYNLYAWVPGVLGDYKYDKEITITPRSSTNLNLLVFDPPRQGPTLWEIGIPD 505

Query: 181 RTAAEFYIPDPQPTLMNRFYNNSDIHT-PDKFRQYGLWERYAELFPHQDLVYNVATDDYR 240
           R AAEFYIP P+PTLMNRFYN+S IH   D FRQYGLWERYAEL+PHQDLVYNV TDDYR
Sbjct: 506 RKAAEFYIPSPRPTLMNRFYNDSKIHIHDDNFRQYGLWERYAELYPHQDLVYNVDTDDYR 565

Query: 241 RHWFFAHVTRATRFGTYQATTWQIVFRLQGPKQSGNYMLRLALASTTEAVVEIRFNNPLA 300
           R+WFFAHVTRAT  G Y+ATTWQIVFRLQ PK+ GNYMLRLALAS+TEAV++IRFNNP  
Sbjct: 566 RNWFFAHVTRATNSGIYEATTWQIVFRLQRPKKIGNYMLRLALASSTEAVIDIRFNNPST 625

Query: 301 RRAHFSTGYWASGRDNAIARHGIHGLYWLFNFKVPSGYLVEDENIIYLTQRRHMGPFQGV 360
           +R HF+TGYW+SG+DNAIARHGIHGLYWLFNFKVPS YLVE EN+IYLTQRRH G FQGV
Sbjct: 626 KRTHFTTGYWSSGKDNAIARHGIHGLYWLFNFKVPSQYLVEGENVIYLTQRRHTGAFQGV 685

Query: 361 MYDYIRFEGVQ 369
           MYDYIRFE V+
Sbjct: 686 MYDYIRFEDVE 696

[Close]

BLAST of Csor.00g058920 vs. TAIR 10
Match: AT1G09910.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 441.4 bits (1134), Expect = 7.0e-124
Identity = 207/366 (56.56%), Postives = 253/366 (69.13%), Query Frame = 0


Query: 2   RFGVGEAWKKVFGPVFIYLNSDPVGSGPGSLWEDAKNQMRIETSKWPYSFVGSTDFPSSN 61
           RF  GE WKKV+GPVFIYLNS   G  P  LW+DAK +M  E  +WPYSFV S D+P S 
Sbjct: 314 RFEHGEPWKKVYGPVFIYLNSTANGDDPLCLWDDAKIKMMAEVERWPYSFVASDDYPKSE 373

Query: 62  QRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGSWQTESKGYQFWTRADGQGYFSI 121
           +RGT  GRLL+RDR     L+    AYVGLA PG+ GSWQ E KGYQFW  AD  GYFSI
Sbjct: 374 ERGTARGRLLIRDRFINNDLISARGAYVGLAPPGDSGSWQIECKGYQFWAIADEAGYFSI 433

Query: 122 NNIRPGNYNLYAWVPGVIGDYKYANDITVTLGSTTRLGLLIYDPPRQGPTLWEIGVPDRT 181
            N+RPG YNLYAWVP  IGDY     + VT G    +G ++Y+PPR GPTLWEIG+PDR 
Sbjct: 434 GNVRPGEYNLYAWVPSFIGDYHNGTIVRVTSGCMIEMGDIVYEPPRDGPTLWEIGIPDRK 493

Query: 182 AAEFYIPDPQPTLMNRFYNNSDIHTPDKFRQYGLWERYAELFPHQDLVYNVATDDYRRHW 241
           A+EF+IPDP PTL+NR      +H  D+FRQYGLW++Y +++P+ DLVY V   DYRR W
Sbjct: 494 ASEFFIPDPDPTLVNRVL----VHHQDRFRQYGLWKKYTDMYPNDDLVYTVGVSDYRRDW 553

Query: 242 FFAHVTRATRFGTYQATTWQIVFRLQGPKQSGNYMLRLALASTTEAVVEIRFNNPLARRA 301
           FFAHV R  +   ++ TTWQI+F L+   Q  NY LR+A+AS T A ++IR N+  A R 
Sbjct: 554 FFAHVPR-KKGDVHEGTTWQIIFNLENIDQKANYKLRVAIASATLAELQIRINDAEAIRP 613

Query: 302 HFSTGYWASGRDNAIARHGIHGLYWLFNFKVPSGYLVEDENIIYLTQRRHMGPFQGVMYD 361
            F+TG    GRDN+IARHGIHG+Y L+   +P   LV+ +N I+L Q R  GPFQG+MYD
Sbjct: 614 LFTTG--LIGRDNSIARHGIHGVYMLYAVNIPGNRLVQGDNTIFLKQPRCNGPFQGIMYD 672

Query: 362 YIRFEG 368
           YIR EG
Sbjct: 674 YIRLEG 672

[Close]

BLAST of Csor.00g058920 vs. TAIR 10
Match: AT1G09890.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 438.0 bits (1125), Expect = 7.8e-123
Identity = 210/366 (57.38%), Postives = 256/366 (69.95%), Query Frame = 0


Query: 2   RFGVGEAWKKVFGPVFIYLNSD-PVGSGPGSLWEDAKNQMRIETSKWPYSFVGSTDFPSS 61
           +F  GEAWKKVFGPVF+YLNS     + P  LW+DAK+QM +E   WPYSF  S D+  +
Sbjct: 256 KFSEGEAWKKVFGPVFVYLNSSTDDDNDPLWLWQDAKSQMNVEAESWPYSFPASDDYVKT 315

Query: 62  NQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGSWQTESKGYQFWTRADGQGYFS 121
            QRG V GRLLV+DR+  K  +  +  YVGLA PG  GSWQ E K YQFWTR D +G+F 
Sbjct: 316 EQRGNVVGRLLVQDRYVDKDFIAANRGYVGLAVPGAAGSWQRECKEYQFWTRTDEEGFFY 375

Query: 122 INNIRPGNYNLYAWVPGVIGDYKYANDITVTLGSTTRLGLLIYDPPRQGPTLWEIGVPDR 181
           I+ IRPG YNLYAW+PG IGDYKY + IT+T G    +  L+Y PPR G TLWEIG PDR
Sbjct: 376 ISGIRPGQYNLYAWIPGFIGDYKYDDVITITSGCYIYVEDLVYQPPRNGATLWEIGFPDR 435

Query: 182 TAAEFYIPDPQPTLMNRFYNNSDIHTPDKFRQYGLWERYAELFPHQDLVYNVATDDYRRH 241
           +AAEFY+PDP P  +N  Y N     PD+FRQYGLWERYAEL+P +DLVY V + DYR+ 
Sbjct: 436 SAAEFYVPDPNPKYINNLYQNH----PDRFRQYGLWERYAELYPDKDLVYVVGSSDYRKD 495

Query: 242 WFFAHVTRATRFGTYQATTWQIVFRLQGPKQSGNYMLRLALASTTEAVVEIRFNNPLARR 301
           WF+A VTR     TYQ TTWQI F L+   ++ +Y LR+A+AS T + ++IR NN  A  
Sbjct: 496 WFYAQVTRKKDNKTYQGTTWQIKFELKNIDKNHSYTLRVAIASATFSELQIRVNNANA-S 555

Query: 302 AHFSTGYWASGRDNAIARHGIHGLYWLFNFKVPSGYLVEDENIIYLTQRRHMGPFQGVMY 361
             F++G    GRDN+IARHGIHGLYWLFN +V    L+E EN ++LTQ R   PFQG+MY
Sbjct: 556 PMFTSG--LIGRDNSIARHGIHGLYWLFNVEVAGSKLLEGENTLFLTQPRSTSPFQGIMY 614

Query: 362 DYIRFE 367
           DYIRFE
Sbjct: 616 DYIRFE 614

[Close]

BLAST of Csor.00g058920 vs. TAIR 10
Match: AT2G22620.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 435.6 bits (1119), Expect = 3.8e-122
Identity = 206/366 (56.28%), Postives = 252/366 (68.85%), Query Frame = 0


Query: 1   MRFGVGEAWKKVFGPVFIYLNSDPVGSGPGSLWEDAKNQMRIETSKWPYSFVGSTDFPSS 60
           M +  GE WKKVFGPV  YLNS         LW DAK QM  E   WPY F+ S D+P  
Sbjct: 313 MDYRNGEPWKKVFGPVLAYLNSVSPKDSTLRLWRDAKRQMAAEVKSWPYDFITSEDYPLR 372

Query: 61  NQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGSWQTESKGYQFWTRADGQGYFS 120
           +QRGT+ G+ L++D +  +  ++G  A+VGLA  GE GSWQTESKGYQFWT+AD +G F 
Sbjct: 373 HQRGTLEGQFLIKDSYVSRLKIYGKFAFVGLAPIGEAGSWQTESKGYQFWTKADRRGRFI 432

Query: 121 INNIRPGNYNLYAWVPGVIGDYKYANDITVTLGSTTRLGLLIYDPPRQGPTLWEIGVPDR 180
           I N+R GNY+LYAW  G IGDYKY  +IT+T GS   +G L+Y+PPR GPTLWEIGVPDR
Sbjct: 433 IENVRAGNYSLYAWGSGFIGDYKYEQNITITPGSEMNVGPLVYEPPRNGPTLWEIGVPDR 492

Query: 181 TAAEFYIPDPQPTLMNRFYNNSDIHTPDKFRQYGLWERYAELFPHQDLVYNVATDDYRRH 240
           TA EFYIPDP PTLMN+ Y N      D+FRQYGLW+RYA+L+P  DLVY +   DYR  
Sbjct: 493 TAGEFYIPDPYPTLMNKLYVNP---LQDRFRQYGLWDRYADLYPQNDLVYTIGVSDYRSD 552

Query: 241 WFFAHVTRATRFGTYQATTWQIVFRLQGPKQSGNYMLRLALASTTEAVVEIRFNNPLARR 300
           WFFAHV R     TYQ TTWQI+F L+   + G Y LR+ALAS  ++ ++IR N+P +  
Sbjct: 553 WFFAHVARNVGNDTYQPTTWQIIFNLKNVNRIGRYTLRIALASAADSELQIRINDPKS-D 612

Query: 301 AHFSTGYWASGRDNAIARHGIHGLYWLFNFKVPSGYLVEDENIIYLTQRRHMGPFQGVMY 360
           A F+TG+   G+DNAIARHGIHGLY L++  V    L   +N I+LTQ R   PFQG+MY
Sbjct: 613 AIFTTGF--IGKDNAIARHGIHGLYRLYSIDVAGNLLSVGDNTIFLTQTRSRTPFQGIMY 672

Query: 361 DYIRFE 367
           DYIR E
Sbjct: 673 DYIRLE 672

[Close]

BLAST of Csor.00g058920 vs. TAIR 10
Match: AT2G22620.2 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 435.6 bits (1119), Expect = 3.8e-122
Identity = 206/366 (56.28%), Postives = 252/366 (68.85%), Query Frame = 0


Query: 1   MRFGVGEAWKKVFGPVFIYLNSDPVGSGPGSLWEDAKNQMRIETSKWPYSFVGSTDFPSS 60
           M +  GE WKKVFGPV  YLNS         LW DAK QM  E   WPY F+ S D+P  
Sbjct: 233 MDYRNGEPWKKVFGPVLAYLNSVSPKDSTLRLWRDAKRQMAAEVKSWPYDFITSEDYPLR 292

Query: 61  NQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGSWQTESKGYQFWTRADGQGYFS 120
           +QRGT+ G+ L++D +  +  ++G  A+VGLA  GE GSWQTESKGYQFWT+AD +G F 
Sbjct: 293 HQRGTLEGQFLIKDSYVSRLKIYGKFAFVGLAPIGEAGSWQTESKGYQFWTKADRRGRFI 352

Query: 121 INNIRPGNYNLYAWVPGVIGDYKYANDITVTLGSTTRLGLLIYDPPRQGPTLWEIGVPDR 180
           I N+R GNY+LYAW  G IGDYKY  +IT+T GS   +G L+Y+PPR GPTLWEIGVPDR
Sbjct: 353 IENVRAGNYSLYAWGSGFIGDYKYEQNITITPGSEMNVGPLVYEPPRNGPTLWEIGVPDR 412

Query: 181 TAAEFYIPDPQPTLMNRFYNNSDIHTPDKFRQYGLWERYAELFPHQDLVYNVATDDYRRH 240
           TA EFYIPDP PTLMN+ Y N      D+FRQYGLW+RYA+L+P  DLVY +   DYR  
Sbjct: 413 TAGEFYIPDPYPTLMNKLYVNP---LQDRFRQYGLWDRYADLYPQNDLVYTIGVSDYRSD 472

Query: 241 WFFAHVTRATRFGTYQATTWQIVFRLQGPKQSGNYMLRLALASTTEAVVEIRFNNPLARR 300
           WFFAHV R     TYQ TTWQI+F L+   + G Y LR+ALAS  ++ ++IR N+P +  
Sbjct: 473 WFFAHVARNVGNDTYQPTTWQIIFNLKNVNRIGRYTLRIALASAADSELQIRINDPKS-D 532

Query: 301 AHFSTGYWASGRDNAIARHGIHGLYWLFNFKVPSGYLVEDENIIYLTQRRHMGPFQGVMY 360
           A F+TG+   G+DNAIARHGIHGLY L++  V    L   +N I+LTQ R   PFQG+MY
Sbjct: 533 AIFTTGF--IGKDNAIARHGIHGLYRLYSIDVAGNLLSVGDNTIFLTQTRSRTPFQGIMY 592

Query: 361 DYIRFE 367
           DYIR E
Sbjct: 593 DYIRLE 592

[Close]

BLAST of Csor.00g058920 vs. TAIR 10
Match: AT1G09880.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 434.9 bits (1117), Expect = 6.6e-122
Identity = 211/368 (57.34%), Postives = 257/368 (69.84%), Query Frame = 0


Query: 1   MRFGVGEAWKKVFGPVFIYLNSDPVGSGPGSLWEDAKNQMRIETSKWPYSFVGSTDFPSS 60
           M F  GEAWKKVFGPVFIYLNS P G  P  LW +AKNQ +IE  KWPY+F  S DFP+S
Sbjct: 259 MSFKNGEAWKKVFGPVFIYLNSFPKGVDPLLLWHEAKNQTKIEEEKWPYNFTASDDFPAS 318

Query: 61  NQRGTVSGRLLVRDRHAKKWLMWGDSAYVGLAAPGELGSWQTESKGYQFWTRADGQGYFS 120
           +QRG+VSGRLLVRDR      +  + +YVGLAAPG++GSWQ E KGYQFW++AD  G FS
Sbjct: 319 DQRGSVSGRLLVRDRFISSEDIPANGSYVGLAAPGDVGSWQRECKGYQFWSKADENGSFS 378

Query: 121 INNIRPGNYNLYAWVPGVIGDYKYANDITVTLGSTTRLGLLIYDPPRQGPTLWEIGVPDR 180
           INN+R G YNLYA+ PG IGDY       ++ GS   LG L+Y+PPR G TLWEIGVPDR
Sbjct: 379 INNVRSGRYNLYAFAPGFIGDYHNDTVFDISPGSKISLGDLVYEPPRDGSTLWEIGVPDR 438

Query: 181 TAAEFYIPDPQPTLMNRFYNNSDIHTPDKFRQYGLWERYAELFPHQDLVYNVATDDYRRH 240
           +AAEFYIPDP P+ +N+ Y N      DK+RQYGLWERY+EL+P +D+VYNV  DDY ++
Sbjct: 439 SAAEFYIPDPNPSFVNKLYLNHS----DKYRQYGLWERYSELYPDEDMVYNVDIDDYSKN 498

Query: 241 WFFAHVTRATRFGTYQATTWQIVFRLQGPKQ--SGNYMLRLALASTTEAVVEIRFNNPLA 300
           WFF  VTR    G Y+ TTWQI F+     +  +GN+ LR+ALA++  A +++R N+  A
Sbjct: 499 WFFMQVTRKQANGGYKGTTWQIRFQFDDKMKNVTGNFKLRIALATSNVAELQVRVNDLSA 558

Query: 301 RRAHFSTGYWASGRDNAIARHGIHGLYWLFNFKVPSGYLVEDENIIYLTQRRHMGPFQGV 360
               F T     GRDN IARHGIHGLYWL++  VP+  L    N IYLTQ     PFQG+
Sbjct: 559 DPPLFRTE--QIGRDNTIARHGIHGLYWLYSVNVPAASLHVGNNTIYLTQALATSPFQGL 618

Query: 361 MYDYIRFE 367
           MYDYIR E
Sbjct: 619 MYDYIRLE 620

The following BLAST results are available for this feature:

BLAST of Csor.00g058920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RJP2	1.6e-19	27.55	Rhamnogalacturonate lyase OS=Dickeya dadantii (strain 3937) OX=198628 GN=rhiE PE...	[more]
A5ABH4	6.0e-11	23.31	Probable rhamnogalacturonate lyase B OS=Aspergillus niger (strain CBS 513.88 / F...	[more]
Q5AZ85	5.1e-10	26.46	Rhamnogalacturonate lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 ...	[more]

BLAST of Csor.00g058920 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6604071.1	1.89e-288	100.00	hypothetical protein SDJN03_04680, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7034239.1	1.46e-280	99.19	rhiE, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022978916.1	2.98e-275	97.29	uncharacterized protein LOC111478723 [Cucurbita maxima]	[more]
XP_023543064.1	1.52e-250	99.70	uncharacterized protein LOC111803045 [Cucurbita pepo subsp. pepo]	[more]
XP_022950941.1	9.80e-250	99.70	uncharacterized protein LOC111453886 [Cucurbita moschata]	[more]

BLAST of Csor.00g058920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IPB6	1.44e-275	97.29	Rhamnogalacturonan endolyase OS=Cucurbita maxima OX=3661 GN=LOC111478723 PE=3 SV...	[more]
A0A6J1GG74	4.74e-250	99.70	Rhamnogalacturonan endolyase OS=Cucurbita moschata OX=3662 GN=LOC111453886 PE=3 ...	[more]
A0A5D3CNX4	2.32e-221	78.98	Rhamnogalacturonan endolyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3B219	3.06e-221	78.98	Rhamnogalacturonan endolyase OS=Cucumis melo OX=3656 GN=LOC103484918 PE=3 SV=1	[more]
A0A1S3B1X3	3.53e-220	78.98	Rhamnogalacturonan endolyase OS=Cucumis melo OX=3656 GN=LOC103484918 PE=3 SV=1	[more]

BLAST of Csor.00g058920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09910.1	7.0e-124	56.56	Rhamnogalacturonate lyase family protein	[more]
AT1G09890.1	7.8e-123	57.38	Rhamnogalacturonate lyase family protein	[more]
AT2G22620.1	3.8e-122	56.28	Rhamnogalacturonate lyase family protein	[more]
AT2G22620.2	3.8e-122	56.28	Rhamnogalacturonate lyase family protein	[more]
AT1G09880.1	6.6e-122	57.34	Rhamnogalacturonate lyase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029413	Rhamnogalacturonan lyase, domain II	PFAM	PF14686	fn3_3	coord: 85..158 e-value: 1.3E-26 score: 92.1
IPR029413	Rhamnogalacturonan lyase, domain II	CDD	cd10316	RGL4_M	coord: 62..159 e-value: 9.47676E-36 score: 123.898
None	No IPR available	GENE3D	2.60.120.260		coord: 169..365 e-value: 3.8E-11 score: 44.8
None	No IPR available	GENE3D	2.60.40.1120		coord: 59..160 e-value: 7.9E-11 score: 44.0
None	No IPR available	PANTHER	PTHR32018	RHAMNOGALACTURONATE LYASE FAMILY PROTEIN	coord: 1..367
None	No IPR available	PANTHER	PTHR32018:SF6	RHAMNOGALACTURONATE LYASE FAMILY PROTEIN	coord: 1..367
None	No IPR available	CDD	cd10317	RGL4_C	coord: 173..366 e-value: 4.20989E-41 score: 140.103
IPR029411	Rhamnogalacturonan lyase, domain III	PFAM	PF14683	CBM-like	coord: 171..364 e-value: 5.5E-48 score: 163.1
IPR008979	Galactose-binding-like domain superfamily	SUPERFAMILY	49785	Galactose-binding domain-like	coord: 169..366
IPR013784	Carbohydrate-binding-like fold	SUPERFAMILY	49452	Starch-binding domain-like	coord: 60..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g058920.m01	Csor.00g058920.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0102210	rhamnogalacturonan endolyase activity