Csor.00g058900 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g058900
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	MADS-box transcription factor 23-like
Location	Csor_Chr03: 6884477 .. 6886102 (+)
RNA-Seq Expression	Csor.00g058900
Synteny	Csor.00g058900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCGAGGGAAGATTGTGATAAGAAGGATCGATAATTCAGCGAGCAGACAAGTGACCTTCTCCAAGAGGAGGAAGGGACTCATTAAAAAGGCTAAAGAGCTCTCTATTCTCTGCGATGCCGAACTTGCTCTCATTATCTTCTCCAGCTCTGGCAAACAGTATGAATTTGCAAGCACTAGGTTCGCCCTCTTTTTGTTTCTTACTTCAAAATCATCTCATTATCTGTATTTCAGTTCTACTTATTAAGAAATTCAGAGGAAATAAATTTAAATGTTAGTTTGTGATTTGTTTTGGTCAGCATAGAGTCGGTAATTGAGAAATATAATAGACGAAAGGAGGAAGATGAACTGCTGTTGAATCCAATTTCTGATGTCAAGGTATACATATAAATACATCCACCATCAATCCAACTTCTTCTTGCTCTCTTTTCTCCATTCTGTGTAGGATTTACTCGATTCCTTCTTCAAAAATTACTTAATGAGTCTCACAGAGCGTGACTGTCTAAAACATAATCTTTAGATACAGATTTGAAATTTGTGCCCACAATTATTAACTAATATATACAAGATTCCAATTACTTATCTAATGGTTTAAATCTATGAGTTATATTGTGATGGTCTACTCCAATAATTTCTCAAAAATCTTCCGAGTTTATTTGATAATTGTTCTAATATAATTGCTGAGGATTAGTTGGTTAAATTATAAATTTATAAAATTTGTGCTTTAAATTTGGAATTTTAACATATTAGAAATTTTGAAAATTATTGATATATTATACATAAAACTAAACCTTTGATTATTGTGTTACATTGAAAGTTATGGCAGAAGGAAGTATCAGCTCTAAGGCAACAACTACTTAACTTGCAGGAGAACAATAGGTAATTAATTAGCTTCTTATTACAAAATTTGGTTATTGTATTGAATAATTAATTATGTTGTAACAAATGCTTAAAAATGTTTAATGTAATTAATATTTTTTTTGTATACAGGAAATTAATGGGGGAGCAGCTCTATGGTTTATCAATTAAAGACCTAAACAGCCTTGAGAGCCAATTAGAGTTCAGCTTACAAAGCATCCGAATTAAAAAGGTCAGATATTTATTTACTTATTAATTTATTAATTAGGTAACAACCCATTTTTTGCATCCTTAAATCATATGAAATTGAGGTGGGTTTAATATTAATACCAATTTCTGTGTTGCAAGCAGGAACAGATATTAAACGATGAAATAAAAGAATTGAACAGAAAGGTAAAAGGAAAAAAGAATGTTGGTTTTCATGAGAGCCTTAAACGAGTAACAAAACTTGGGTTGTTCTTCTCCGTTACCATTTGCAGGGAATTCTGATGCACCAACAAAATGTAGAGCTGGCCAATAAAGTAAACCTCTTTTGTCAAGAAAACATTGAATTGCACAGAAAGGTATCTCTCTCGAACAAAGCCTCAACCAATTAATTCCATAAATCATTGTGATAATTAGTTCTTAATCTCTGCAGGTTTACGGGCATGATTCAAGATTAGAGATGAGCGTGGCCACCGGAAACCCGTTGATTCCGTATGCAATTGGAGGCGACGCCGGCCTGCGTGTGCCAATCCACCTTCAGCTCAGCCCGCGGGAGCAATGA

mRNA sequence

ATGGGTCGAGGGAAGATTGTGATAAGAAGGATCGATAATTCAGCGAGCAGACAAGTGACCTTCTCCAAGAGGAGGAAGGGACTCATTAAAAAGGCTAAAGAGCTCTCTATTCTCTGCGATGCCGAACTTGCTCTCATTATCTTCTCCAGCTCTGGCAAACAGTATGAATTTGCAAGCACTAGCATAGAGTCGGTAATTGAGAAATATAATAGACGAAAGGAGGAAGATGAACTGCTGTTGAATCCAATTTCTGATGTCAAGAAGGAAGTATCAGCTCTAAGGCAACAACTACTTAACTTGCAGGAGAACAATAGGAAATTAATGGGGGAGCAGCTCTATGGTTTATCAATTAAAGACCTAAACAGCCTTGAGAGCCAATTAGAGTTCAGCTTACAAAGCATCCGAATTAAAAAGGGAATTCTGATGCACCAACAAAATGTAGAGCTGGCCAATAAAGTAAACCTCTTTTGTCAAGAAAACATTGAATTGCACAGAAAGGTTTACGGGCATGATTCAAGATTAGAGATGAGCGTGGCCACCGGAAACCCGTTGATTCCGTATGCAATTGGAGGCGACGCCGGCCTGCGTGTGCCAATCCACCTTCAGCTCAGCCCGCGGGAGCAATGA

Coding sequence (CDS)

ATGGGTCGAGGGAAGATTGTGATAAGAAGGATCGATAATTCAGCGAGCAGACAAGTGACCTTCTCCAAGAGGAGGAAGGGACTCATTAAAAAGGCTAAAGAGCTCTCTATTCTCTGCGATGCCGAACTTGCTCTCATTATCTTCTCCAGCTCTGGCAAACAGTATGAATTTGCAAGCACTAGCATAGAGTCGGTAATTGAGAAATATAATAGACGAAAGGAGGAAGATGAACTGCTGTTGAATCCAATTTCTGATGTCAAGAAGGAAGTATCAGCTCTAAGGCAACAACTACTTAACTTGCAGGAGAACAATAGGAAATTAATGGGGGAGCAGCTCTATGGTTTATCAATTAAAGACCTAAACAGCCTTGAGAGCCAATTAGAGTTCAGCTTACAAAGCATCCGAATTAAAAAGGGAATTCTGATGCACCAACAAAATGTAGAGCTGGCCAATAAAGTAAACCTCTTTTGTCAAGAAAACATTGAATTGCACAGAAAGGTTTACGGGCATGATTCAAGATTAGAGATGAGCGTGGCCACCGGAAACCCGTTGATTCCGTATGCAATTGGAGGCGACGCCGGCCTGCGTGTGCCAATCCACCTTCAGCTCAGCCCGCGGGAGCAATGA

Protein sequence

MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFASTSIESVIEKYNRRKEEDELLLNPISDVKKEVSALRQQLLNLQENNRKLMGEQLYGLSIKDLNSLESQLEFSLQSIRIKKGILMHQQNVELANKVNLFCQENIELHRKVYGHDSRLEMSVATGNPLIPYAIGGDAGLRVPIHLQLSPREQ

Homology

[Close]

BLAST of Csor.00g058900 vs. ExPASy Swiss-Prot
Match: Q6EP49 (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS27 PE=2 SV=2)

HSP 1 Score: 204.1 bits (518), Expect = 1.5e-51
Identity = 116/225 (51.56%), Postives = 158/225 (70.22%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST 60
           MGRGKIVIRRIDNS SRQVTFSKRR G+ KKAKEL+ILCDAE+ L+IFSS+G+ YE++ST
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSST 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVK---KEVSALRQQLLNLQENNRKLMGEQLYGLSI 120
           S++SVI++Y + K+E + + NP S++K   +E ++LRQQL NLQEN+R+LMGE L GL++
Sbjct: 61  SMKSVIDRYGKSKDEQQAVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLSGLNV 120

Query: 121 KDLNSLESQLEFSLQSIRIK--------------KGILMHQQNVELANKVNLFCQENIEL 180
           K+L SLE+QLE SL+S+R K              KG L+HQ+N+EL  K++L  QEN EL
Sbjct: 121 KELQSLENQLEISLRSVRTKKDHVLIDEIHELNRKGSLVHQENMELYKKISLIRQENAEL 180

Query: 181 HRKVYGHDSRLEMSVATGNPLIPYAIGGDAGLRVPIHLQLSPREQ 209
           ++K+Y  +   E++    +   PY         VP+ L LS   Q
Sbjct: 181 YKKIYETEGPSEVN---RDSPTPYNFAVIEKTNVPVQLGLSTLPQ 222

[Close]

BLAST of Csor.00g058900 vs. ExPASy Swiss-Prot
Match: Q9SZJ6 (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana OX=3702 GN=AGL21 PE=1 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 3.7e-50
Identity = 111/180 (61.67%), Postives = 145/180 (80.56%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST 60
           MGRGKIVI+RID+S SRQVTFSKRRKGLIKKAKEL+ILCDAE+ LIIFSS+GK Y+FAS+
Sbjct: 1   MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASS 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVK---KEVSALRQQLLNLQENNRKLMGEQLYGLSI 120
           S++SVI++YN+ K E + LLNP S+VK   +E + LRQ+L  LQEN+R++MGEQL GLS+
Sbjct: 61  SMKSVIDRYNKSKIEQQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSV 120

Query: 121 KDLNSLESQLEFSLQSIRIKKGILMHQQNVELANKVNLFCQENIELHRKVYG-HDSRLEM 177
            +LNSLE+Q+E SL+ IR++K  L+ Q+  EL+ K NL  QEN++L RKV   H   +E+
Sbjct: 121 NELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRKVQRIHQENVEL 180

[Close]

BLAST of Csor.00g058900 vs. ExPASy Swiss-Prot
Match: Q6Z6W2 (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS57 PE=1 SV=2)

HSP 1 Score: 186.8 bits (473), Expect = 2.5e-46
Identity = 108/225 (48.00%), Postives = 156/225 (69.33%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST 60
           MGRGKIVIRRIDNS SRQVTFSKRR GL+KKAKELSILCDAE+ L++FSS+G+ YEF+ST
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSST 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVK---KEVSALRQQLLNLQENNRKLMGEQLYGLSI 120
           ++++VI++Y   KEE  L  N  S++K   +E ++LRQQL NLQE++++LMGE+L GL +
Sbjct: 61  NMKTVIDRYTNAKEE-LLGGNATSEIKIWQREAASLRQQLHNLQESHKQLMGEELSGLGV 120

Query: 121 KDLNSLESQLEFSLQSIRIK--------------KGILMHQQNVELANKVNLFCQENIEL 180
           +DL  LE++LE SL++IR++              KG L+HQ+N+EL+  +N+  Q+ +EL
Sbjct: 121 RDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQENIELSRSLNVMSQQKLEL 180

Query: 181 HRKVYGHDSRLEMSVATGNPLIPYAIGGDAGLRVPIHLQLSPREQ 209
           + K+   + R   + A  +   PY+        +P  L+LS  +Q
Sbjct: 181 YNKLQACEQR-GATDANESSSTPYSFRIIQNANMPPSLELSQSQQ 223

[Close]

BLAST of Csor.00g058900 vs. ExPASy Swiss-Prot
Match: A2RVQ5 (Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana OX=3702 GN=AGL16 PE=1 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 3.2e-46
Identity = 110/222 (49.55%), Postives = 155/222 (69.82%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST 60
           MGRGKI I+RI+NS SRQVTFSKRR GL+KKAKEL+ILCDAE+ +IIFSS+G+ Y+F+S+
Sbjct: 1   MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDV---KKEVSALRQQLLNLQENNRKLMGEQLYGLSI 120
           S++SVIE+Y+  K E     +P S++   +KE + L++QL NLQEN+R++MGE+L GLS+
Sbjct: 61  SMKSVIERYSDAKGETSSENDPASEIQFWQKEAAILKRQLHNLQENHRQMMGEELSGLSV 120

Query: 121 KDLNSLESQLEFSLQSIRIKK--------------GILMHQQNVELANKVNLFCQENIEL 180
           + L +LE+QLE SL+ +R+KK              G L+HQ+N++L  KVNL  Q+N+EL
Sbjct: 121 EALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDLHKKVNLMHQQNMEL 180

Query: 181 HRKVYGHDSRLE-MSVATGNPLIPYAIGGDAGLRVPIHLQLS 205
           H KV    S +E + +A  N L+   +         +HLQLS
Sbjct: 181 HEKV----SEVEGVKIANKNSLLTNGLDMRDTSNEHVHLQLS 218

[Close]

BLAST of Csor.00g058900 vs. ExPASy Swiss-Prot
Match: Q38840 (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana OX=3702 GN=AGL17 PE=1 SV=2)

HSP 1 Score: 186.0 bits (471), Expect = 4.2e-46
Identity = 104/186 (55.91%), Postives = 139/186 (74.73%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST 60
           MGRGKIVI++ID+S SRQVTFSKRRKGLIKKAKEL+ILCDAE+ LIIFS++ K Y+FAS+
Sbjct: 1   MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASS 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVK---KEVSALRQQLLNLQENNRKLMGEQLYGLSI 120
           S++S IE++N  K E++ L+NP S+VK   +E   LRQ+L +LQEN R+L G +L GLS+
Sbjct: 61  SVKSTIERFNTAKMEEQELMNPASEVKFWQREAETLRQELHSLQENYRQLTGVELNGLSV 120

Query: 121 KDLNSLESQLEFSLQSIRIK--------------KGILMHQQNVELANKVNLFCQENIEL 170
           K+L ++ESQLE SL+ IR+K              K  L+H +N+EL+ KV    QEN+EL
Sbjct: 121 KELQNIESQLEMSLRGIRMKREQILTNEIKELTRKRNLVHHENLELSRKVQRIHQENVEL 180

[Close]

BLAST of Csor.00g058900 vs. NCBI nr
Match: KAG6604073.1 (MADS-box transcription factor 27, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 397 bits (1019), Expect = 5.62e-139
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST 60
           MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST
Sbjct: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVKKEVSALRQQLLNLQENNRKLMGEQLYGLSIKDL 120
           SIESVIEKYNRRKEEDELLLNPISDVKKEVSALRQQLLNLQENNRKLMGEQLYGLSIKDL
Sbjct: 61  SIESVIEKYNRRKEEDELLLNPISDVKKEVSALRQQLLNLQENNRKLMGEQLYGLSIKDL 120

Query: 121 NSLESQLEFSLQSIRIKKGILMHQQNVELANKVNLFCQENIELHRKVYGHDSRLEMSVAT 180
           NSLESQLEFSLQSIRIKKGILMHQQNVELANKVNLFCQENIELHRKVYGHDSRLEMSVAT
Sbjct: 121 NSLESQLEFSLQSIRIKKGILMHQQNVELANKVNLFCQENIELHRKVYGHDSRLEMSVAT 180

Query: 181 GNPLIPYAIGGDAGLRVPIHLQLSPREQ 208
           GNPLIPYAIGGDAGLRVPIHLQLSPREQ
Sbjct: 181 GNPLIPYAIGGDAGLRVPIHLQLSPREQ 208

[Close]

BLAST of Csor.00g058900 vs. NCBI nr
Match: XP_022950637.1 (MADS-box transcription factor 23-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 387 bits (994), Expect = 6.00e-135
Identity = 208/222 (93.69%), Postives = 208/222 (93.69%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST 60
           MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST
Sbjct: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVKKEVSALRQQLLNLQENNRKLMGEQLYGLSIKDL 120
           SIESVIEKYNRRKEEDELLLNPISDVKKEVSALRQQLLNLQENNRKLMGEQLYGLSIKDL
Sbjct: 61  SIESVIEKYNRRKEEDELLLNPISDVKKEVSALRQQLLNLQENNRKLMGEQLYGLSIKDL 120

Query: 121 NSLESQLEFSLQSIRIKK--------------GILMHQQNVELANKVNLFCQENIELHRK 180
           NSLESQLEFSLQSIRIKK              GILMHQQNVELANKVNLFCQENIELHRK
Sbjct: 121 NSLESQLEFSLQSIRIKKEQILNDEIKELNRKGILMHQQNVELANKVNLFCQENIELHRK 180

Query: 181 VYGHDSRLEMSVATGNPLIPYAIGGDAGLRVPIHLQLSPREQ 208
           VYGHDSRLEMSVATGNPLIPYAIGGDAGLRVPIHLQLSPREQ
Sbjct: 181 VYGHDSRLEMSVATGNPLIPYAIGGDAGLRVPIHLQLSPREQ 222

[Close]

BLAST of Csor.00g058900 vs. NCBI nr
Match: XP_022950636.1 (MADS-box transcription factor 23-like isoform X1 [Cucurbita moschata] >KAG7034240.1 MADS-box transcription factor 27, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 382 bits (980), Expect = 9.08e-133
Identity = 208/225 (92.44%), Postives = 208/225 (92.44%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST 60
           MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST
Sbjct: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVK---KEVSALRQQLLNLQENNRKLMGEQLYGLSI 120
           SIESVIEKYNRRKEEDELLLNPISDVK   KEVSALRQQLLNLQENNRKLMGEQLYGLSI
Sbjct: 61  SIESVIEKYNRRKEEDELLLNPISDVKLWQKEVSALRQQLLNLQENNRKLMGEQLYGLSI 120

Query: 121 KDLNSLESQLEFSLQSIRIKK--------------GILMHQQNVELANKVNLFCQENIEL 180
           KDLNSLESQLEFSLQSIRIKK              GILMHQQNVELANKVNLFCQENIEL
Sbjct: 121 KDLNSLESQLEFSLQSIRIKKEQILNDEIKELNRKGILMHQQNVELANKVNLFCQENIEL 180

Query: 181 HRKVYGHDSRLEMSVATGNPLIPYAIGGDAGLRVPIHLQLSPREQ 208
           HRKVYGHDSRLEMSVATGNPLIPYAIGGDAGLRVPIHLQLSPREQ
Sbjct: 181 HRKVYGHDSRLEMSVATGNPLIPYAIGGDAGLRVPIHLQLSPREQ 225

[Close]

BLAST of Csor.00g058900 vs. NCBI nr
Match: XP_022977970.1 (MADS-box transcription factor 23-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 374 bits (960), Expect = 1.25e-129
Identity = 204/231 (88.31%), Postives = 206/231 (89.18%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST 60
           MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAE+ALIIFSSSGKQYEFAST
Sbjct: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAST 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVKKEVSALRQQLLNLQENNRKLMGEQLYGLSIKDL 120
           SIESVIEKYNRRKEEDELLLNPISDVKKEVS LRQQLLNLQENNRKLMGEQLYGLSIKDL
Sbjct: 61  SIESVIEKYNRRKEEDELLLNPISDVKKEVSGLRQQLLNLQENNRKLMGEQLYGLSIKDL 120

Query: 121 NSLESQLEFSLQSIRIKK--------------GILMHQQNVELANKVNLFCQENIELHRK 180
           NSLESQLEFSLQSIRIKK              GILMHQQNVELANKVNLFCQEN+ELHRK
Sbjct: 121 NSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENMELHRK 180

Query: 181 VYGHDSRLEMSVATGNPLIPYAI---------GGDAGLRVPIHLQLSPREQ 208
           VYGHDSRLEMSVATGNPLIPY I         GGDAGLRVPIHLQLSPREQ
Sbjct: 181 VYGHDSRLEMSVATGNPLIPYGIISAAAAGPIGGDAGLRVPIHLQLSPREQ 231

[Close]

BLAST of Csor.00g058900 vs. NCBI nr
Match: XP_022977969.1 (MADS-box transcription factor 23-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 369 bits (946), Expect = 1.90e-127
Identity = 204/234 (87.18%), Postives = 206/234 (88.03%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST 60
           MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAE+ALIIFSSSGKQYEFAST
Sbjct: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAST 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVK---KEVSALRQQLLNLQENNRKLMGEQLYGLSI 120
           SIESVIEKYNRRKEEDELLLNPISDVK   KEVS LRQQLLNLQENNRKLMGEQLYGLSI
Sbjct: 61  SIESVIEKYNRRKEEDELLLNPISDVKLWQKEVSGLRQQLLNLQENNRKLMGEQLYGLSI 120

Query: 121 KDLNSLESQLEFSLQSIRIKK--------------GILMHQQNVELANKVNLFCQENIEL 180
           KDLNSLESQLEFSLQSIRIKK              GILMHQQNVELANKVNLFCQEN+EL
Sbjct: 121 KDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENMEL 180

Query: 181 HRKVYGHDSRLEMSVATGNPLIPYAI---------GGDAGLRVPIHLQLSPREQ 208
           HRKVYGHDSRLEMSVATGNPLIPY I         GGDAGLRVPIHLQLSPREQ
Sbjct: 181 HRKVYGHDSRLEMSVATGNPLIPYGIISAAAAGPIGGDAGLRVPIHLQLSPREQ 234

[Close]

BLAST of Csor.00g058900 vs. ExPASy TrEMBL
Match: A0A6J1GFD5 (MADS-box transcription factor 23-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453677 PE=4 SV=1)

HSP 1 Score: 387 bits (994), Expect = 2.90e-135
Identity = 208/222 (93.69%), Postives = 208/222 (93.69%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST 60
           MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST
Sbjct: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVKKEVSALRQQLLNLQENNRKLMGEQLYGLSIKDL 120
           SIESVIEKYNRRKEEDELLLNPISDVKKEVSALRQQLLNLQENNRKLMGEQLYGLSIKDL
Sbjct: 61  SIESVIEKYNRRKEEDELLLNPISDVKKEVSALRQQLLNLQENNRKLMGEQLYGLSIKDL 120

Query: 121 NSLESQLEFSLQSIRIKK--------------GILMHQQNVELANKVNLFCQENIELHRK 180
           NSLESQLEFSLQSIRIKK              GILMHQQNVELANKVNLFCQENIELHRK
Sbjct: 121 NSLESQLEFSLQSIRIKKEQILNDEIKELNRKGILMHQQNVELANKVNLFCQENIELHRK 180

Query: 181 VYGHDSRLEMSVATGNPLIPYAIGGDAGLRVPIHLQLSPREQ 208
           VYGHDSRLEMSVATGNPLIPYAIGGDAGLRVPIHLQLSPREQ
Sbjct: 181 VYGHDSRLEMSVATGNPLIPYAIGGDAGLRVPIHLQLSPREQ 222

[Close]

BLAST of Csor.00g058900 vs. ExPASy TrEMBL
Match: A0A6J1GFD4 (MADS-box transcription factor 23-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453677 PE=4 SV=1)

HSP 1 Score: 382 bits (980), Expect = 4.40e-133
Identity = 208/225 (92.44%), Postives = 208/225 (92.44%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST 60
           MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST
Sbjct: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVK---KEVSALRQQLLNLQENNRKLMGEQLYGLSI 120
           SIESVIEKYNRRKEEDELLLNPISDVK   KEVSALRQQLLNLQENNRKLMGEQLYGLSI
Sbjct: 61  SIESVIEKYNRRKEEDELLLNPISDVKLWQKEVSALRQQLLNLQENNRKLMGEQLYGLSI 120

Query: 121 KDLNSLESQLEFSLQSIRIKK--------------GILMHQQNVELANKVNLFCQENIEL 180
           KDLNSLESQLEFSLQSIRIKK              GILMHQQNVELANKVNLFCQENIEL
Sbjct: 121 KDLNSLESQLEFSLQSIRIKKEQILNDEIKELNRKGILMHQQNVELANKVNLFCQENIEL 180

Query: 181 HRKVYGHDSRLEMSVATGNPLIPYAIGGDAGLRVPIHLQLSPREQ 208
           HRKVYGHDSRLEMSVATGNPLIPYAIGGDAGLRVPIHLQLSPREQ
Sbjct: 181 HRKVYGHDSRLEMSVATGNPLIPYAIGGDAGLRVPIHLQLSPREQ 225

[Close]

BLAST of Csor.00g058900 vs. ExPASy TrEMBL
Match: A0A6J1INS2 (MADS-box transcription factor 23-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478102 PE=4 SV=1)

HSP 1 Score: 374 bits (960), Expect = 6.08e-130
Identity = 204/231 (88.31%), Postives = 206/231 (89.18%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST 60
           MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAE+ALIIFSSSGKQYEFAST
Sbjct: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAST 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVKKEVSALRQQLLNLQENNRKLMGEQLYGLSIKDL 120
           SIESVIEKYNRRKEEDELLLNPISDVKKEVS LRQQLLNLQENNRKLMGEQLYGLSIKDL
Sbjct: 61  SIESVIEKYNRRKEEDELLLNPISDVKKEVSGLRQQLLNLQENNRKLMGEQLYGLSIKDL 120

Query: 121 NSLESQLEFSLQSIRIKK--------------GILMHQQNVELANKVNLFCQENIELHRK 180
           NSLESQLEFSLQSIRIKK              GILMHQQNVELANKVNLFCQEN+ELHRK
Sbjct: 121 NSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENMELHRK 180

Query: 181 VYGHDSRLEMSVATGNPLIPYAI---------GGDAGLRVPIHLQLSPREQ 208
           VYGHDSRLEMSVATGNPLIPY I         GGDAGLRVPIHLQLSPREQ
Sbjct: 181 VYGHDSRLEMSVATGNPLIPYGIISAAAAGPIGGDAGLRVPIHLQLSPREQ 231

[Close]

BLAST of Csor.00g058900 vs. ExPASy TrEMBL
Match: A0A6J1IST8 (MADS-box transcription factor 23-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478102 PE=4 SV=1)

HSP 1 Score: 369 bits (946), Expect = 9.18e-128
Identity = 204/234 (87.18%), Postives = 206/234 (88.03%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST 60
           MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAE+ALIIFSSSGKQYEFAST
Sbjct: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAST 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVK---KEVSALRQQLLNLQENNRKLMGEQLYGLSI 120
           SIESVIEKYNRRKEEDELLLNPISDVK   KEVS LRQQLLNLQENNRKLMGEQLYGLSI
Sbjct: 61  SIESVIEKYNRRKEEDELLLNPISDVKLWQKEVSGLRQQLLNLQENNRKLMGEQLYGLSI 120

Query: 121 KDLNSLESQLEFSLQSIRIKK--------------GILMHQQNVELANKVNLFCQENIEL 180
           KDLNSLESQLEFSLQSIRIKK              GILMHQQNVELANKVNLFCQEN+EL
Sbjct: 121 KDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKVNLFCQENMEL 180

Query: 181 HRKVYGHDSRLEMSVATGNPLIPYAI---------GGDAGLRVPIHLQLSPREQ 208
           HRKVYGHDSRLEMSVATGNPLIPY I         GGDAGLRVPIHLQLSPREQ
Sbjct: 181 HRKVYGHDSRLEMSVATGNPLIPYGIISAAAAGPIGGDAGLRVPIHLQLSPREQ 234

[Close]

BLAST of Csor.00g058900 vs. ExPASy TrEMBL
Match: A0A1S3B0V7 (MADS-box transcription factor 23 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484916 PE=4 SV=1)

HSP 1 Score: 321 bits (822), Expect = 4.98e-109
Identity = 179/224 (79.91%), Postives = 194/224 (86.61%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST 60
           MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAE+ LIIFSSSGK YEFAS+
Sbjct: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVGLIIFSSSGKHYEFASS 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVK---KEVSALRQQLLNLQENNRKLMGEQLYGLSI 120
           S+ S+IEKYNRRKEEDELLLNPISDVK   KEV+ LRQQL NLQENNRKLMGEQLYGLSI
Sbjct: 61  SMHSIIEKYNRRKEEDELLLNPISDVKLWQKEVTTLRQQLHNLQENNRKLMGEQLYGLSI 120

Query: 121 KDLNSLESQLEFSLQSIRIKKGILMHQQNVELANKVNLFCQENIELHRKVYGHD-SRLEM 180
           KDLN+LE+QLEFSLQSIRIKKGILMHQ+N+EL NKV+L+CQEN+ELHRKVYGH+ SR EM
Sbjct: 121 KDLNNLENQLEFSLQSIRIKKGILMHQENIELCNKVSLYCQENMELHRKVYGHNYSRSEM 180

Query: 181 SVA-TGNPLIPYAI-----------GGDAGLRVPIHLQLSPREQ 208
           ++A TGN LIPY I           G D  L VPIHLQLSP EQ
Sbjct: 181 NLANTGNALIPYGIITATAAAAPIAGND--LCVPIHLQLSPPEQ 222

[Close]

BLAST of Csor.00g058900 vs. TAIR 10
Match: AT4G37940.1 (AGAMOUS-like 21 )

HSP 1 Score: 199.5 bits (506), Expect = 2.6e-51
Identity = 111/180 (61.67%), Postives = 145/180 (80.56%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST 60
           MGRGKIVI+RID+S SRQVTFSKRRKGLIKKAKEL+ILCDAE+ LIIFSS+GK Y+FAS+
Sbjct: 1   MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASS 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVK---KEVSALRQQLLNLQENNRKLMGEQLYGLSI 120
           S++SVI++YN+ K E + LLNP S+VK   +E + LRQ+L  LQEN+R++MGEQL GLS+
Sbjct: 61  SMKSVIDRYNKSKIEQQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSV 120

Query: 121 KDLNSLESQLEFSLQSIRIKKGILMHQQNVELANKVNLFCQENIELHRKVYG-HDSRLEM 177
            +LNSLE+Q+E SL+ IR++K  L+ Q+  EL+ K NL  QEN++L RKV   H   +E+
Sbjct: 121 NELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRKVQRIHQENVEL 180

[Close]

BLAST of Csor.00g058900 vs. TAIR 10
Match: AT3G57230.1 (AGAMOUS-like 16 )

HSP 1 Score: 186.4 bits (472), Expect = 2.3e-47
Identity = 110/222 (49.55%), Postives = 155/222 (69.82%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST 60
           MGRGKI I+RI+NS SRQVTFSKRR GL+KKAKEL+ILCDAE+ +IIFSS+G+ Y+F+S+
Sbjct: 1   MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDV---KKEVSALRQQLLNLQENNRKLMGEQLYGLSI 120
           S++SVIE+Y+  K E     +P S++   +KE + L++QL NLQEN+R++MGE+L GLS+
Sbjct: 61  SMKSVIERYSDAKGETSSENDPASEIQFWQKEAAILKRQLHNLQENHRQMMGEELSGLSV 120

Query: 121 KDLNSLESQLEFSLQSIRIKK--------------GILMHQQNVELANKVNLFCQENIEL 180
           + L +LE+QLE SL+ +R+KK              G L+HQ+N++L  KVNL  Q+N+EL
Sbjct: 121 EALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDLHKKVNLMHQQNMEL 180

Query: 181 HRKVYGHDSRLE-MSVATGNPLIPYAIGGDAGLRVPIHLQLS 205
           H KV    S +E + +A  N L+   +         +HLQLS
Sbjct: 181 HEKV----SEVEGVKIANKNSLLTNGLDMRDTSNEHVHLQLS 218

[Close]

BLAST of Csor.00g058900 vs. TAIR 10
Match: AT2G22630.1 (AGAMOUS-like 17 )

HSP 1 Score: 186.0 bits (471), Expect = 3.0e-47
Identity = 104/186 (55.91%), Postives = 139/186 (74.73%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST 60
           MGRGKIVI++ID+S SRQVTFSKRRKGLIKKAKEL+ILCDAE+ LIIFS++ K Y+FAS+
Sbjct: 1   MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASS 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVK---KEVSALRQQLLNLQENNRKLMGEQLYGLSI 120
           S++S IE++N  K E++ L+NP S+VK   +E   LRQ+L +LQEN R+L G +L GLS+
Sbjct: 61  SVKSTIERFNTAKMEEQELMNPASEVKFWQREAETLRQELHSLQENYRQLTGVELNGLSV 120

Query: 121 KDLNSLESQLEFSLQSIRIK--------------KGILMHQQNVELANKVNLFCQENIEL 170
           K+L ++ESQLE SL+ IR+K              K  L+H +N+EL+ KV    QEN+EL
Sbjct: 121 KELQNIESQLEMSLRGIRMKREQILTNEIKELTRKRNLVHHENLELSRKVQRIHQENVEL 180

[Close]

BLAST of Csor.00g058900 vs. TAIR 10
Match: AT2G14210.1 (AGAMOUS-like 44 )

HSP 1 Score: 184.9 bits (468), Expect = 6.7e-47
Identity = 114/230 (49.57%), Postives = 156/230 (67.83%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAS- 60
           MGRGKIVIRRIDNS SRQVTFSKRR GL+KKAKELSILCDAE+ +IIFSS+GK Y++AS 
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVGVIIFSSTGKLYDYASN 60

Query: 61  TSIESVIEKYNRRKEEDELLLNPISDVK---KEVSALRQQLLNLQENNRKLMGEQLYGLS 120
           +S++++IE+YNR KEE   LLN  S++K   +EV++L+QQL  LQE +RKL+GE+L G++
Sbjct: 61  SSMKTIIERYNRVKEEQHQLLNHASEIKFWQREVASLQQQLQYLQECHRKLVGEELSGMN 120

Query: 121 IKDLNSLESQLEFSLQSIRIK--------------KGILMHQQNVELANKVNLFCQENIE 180
             DL +LE QL  SL+ +R+K              KG ++ ++N EL N V++  +ENI+
Sbjct: 121 ANDLQNLEDQLVTSLKGVRLKKDQLMTNEIRELNRKGQIIQKENHELQNIVDIMRKENIK 180

Query: 181 LHRKVYGHDSRLEMSVATGNPLIPYAIGGDAGLRVP----IHLQLSPREQ 209
           L +KV+G  + +E     GN  +     G      P    I LQ +PRE+
Sbjct: 181 LQKKVHGRTNAIE-----GNSSVDPISNGTTTYAPPQLQLIQLQPAPREK 225

[Close]

BLAST of Csor.00g058900 vs. TAIR 10
Match: AT3G57230.2 (AGAMOUS-like 16 )

HSP 1 Score: 165.6 bits (418), Expect = 4.2e-41
Identity = 101/221 (45.70%), Postives = 147/221 (66.52%), Query Frame = 0


Query: 1   MGRGKIVIRRIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAST 60
           MGRGKI I+RI+NS SRQVTFSKRR GL+KKAKEL+ILCDAE+ +IIFSS+G+ Y+F+S+
Sbjct: 1   MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60

Query: 61  SIESVIEKYNRRKEEDELLLNPISDVKKEVSALRQQLLNLQE--NNRKLMGEQLYGLSIK 120
           S++SVIE+Y+  K E     +P S++++      ++    +E   +R++MGE+L GLS++
Sbjct: 61  SMKSVIERYSDAKGETSSENDPASEIQEMYIVTLEKYAYSEELVLDRQMMGEELSGLSVE 120

Query: 121 DLNSLESQLEFSLQSIRIKK--------------GILMHQQNVELANKVNLFCQENIELH 180
            L +LE+QLE SL+ +R+KK              G L+HQ+N++L  KVNL  Q+N+ELH
Sbjct: 121 ALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDLHKKVNLMHQQNMELH 180

Query: 181 RKVYGHDSRLE-MSVATGNPLIPYAIGGDAGLRVPIHLQLS 205
            KV    S +E + +A  N L+   +         +HLQLS
Sbjct: 181 EKV----SEVEGVKIANKNSLLTNGLDMRDTSNEHVHLQLS 217

The following BLAST results are available for this feature:

BLAST of Csor.00g058900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6EP49	1.5e-51	51.56	MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]
Q9SZJ6	3.7e-50	61.67	Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana OX=3702 GN=AGL21 PE=...	[more]
Q6Z6W2	2.5e-46	48.00	MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]
A2RVQ5	3.2e-46	49.55	Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana OX=3702 GN=AGL16 PE=...	[more]
Q38840	4.2e-46	55.91	Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana OX=3702 GN=AGL17 PE=...	[more]

BLAST of Csor.00g058900 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6604073.1	5.62e-139	100.00	MADS-box transcription factor 27, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022950637.1	6.00e-135	93.69	MADS-box transcription factor 23-like isoform X2 [Cucurbita moschata]	[more]
XP_022950636.1	9.08e-133	92.44	MADS-box transcription factor 23-like isoform X1 [Cucurbita moschata] >KAG703424...	[more]
XP_022977970.1	1.25e-129	88.31	MADS-box transcription factor 23-like isoform X2 [Cucurbita maxima]	[more]
XP_022977969.1	1.90e-127	87.18	MADS-box transcription factor 23-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Csor.00g058900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GFD5	2.90e-135	93.69	MADS-box transcription factor 23-like isoform X2 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1GFD4	4.40e-133	92.44	MADS-box transcription factor 23-like isoform X1 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1INS2	6.08e-130	88.31	MADS-box transcription factor 23-like isoform X2 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1IST8	9.18e-128	87.18	MADS-box transcription factor 23-like isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A1S3B0V7	4.98e-109	79.91	MADS-box transcription factor 23 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484...	[more]

BLAST of Csor.00g058900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37940.1	2.6e-51	61.67	AGAMOUS-like 21	[more]
AT3G57230.1	2.3e-47	49.55	AGAMOUS-like 16	[more]
AT2G22630.1	3.0e-47	55.91	AGAMOUS-like 17	[more]
AT2G14210.1	6.7e-47	49.57	AGAMOUS-like 44	[more]
AT3G57230.2	4.2e-41	45.70	AGAMOUS-like 16	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 83..110
None	No IPR available	PANTHER	PTHR48019:SF83	MADS-BOX TRANSCRIPTION FACTOR 23 ISOFORM X1	coord: 1..205
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 1..205
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 23..38 score: 71.33 coord: 3..23 score: 60.87 coord: 38..59 score: 62.0
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 6.2E-37 score: 138.7
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 e-value: 1.2E-23 score: 82.4
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 30.655596
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 86..167 e-value: 6.1E-19 score: 68.0
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 83..173 score: 11.684748
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 13..106 e-value: 1.4E-27 score: 97.5
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..76
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 2..77 e-value: 3.28318E-40 score: 129.98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g058900.m02	Csor.00g058900.m02	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding