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Csor.00g058470 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTATGGAGGCATTTTGTGCTTATACTTCCTCATCTTCCTCTTCCTCCTCGAGCTTTTTGGCTCAGAAAAGGGACCAATCTGAGGACGTGAGGAGGGAATTTTCGAGTTATTCCAATAATAATCTTCACTGTGTTCGAAAGCCGATGGCGAAGCCATGGAAGAAGCCGGCGATTGCGCCACTGCCACCGACTCGGCCGAGGGTCTACAAAGTGGACCCACTTAACTTCCGGAATTTGGTTCAGAAACTCACCGGTTTGGCTGAGCTTCGATCTCCACGCCTCCAAAAGATGGCGCCACCACCGCTTGATATTGCCCGCTGTCCAGTCTCGAACGTTGCCGTCGTGGAAGCCTCCACGCTTCAGCCTTTGCCTGTGAGGCTGGACGAGGCGGTGGACGGTGGGAGCTTTCTCGAGCTCAACTTGTCGCCCTTCAACAAAAATTGGTGCTCTTTCCCTGCTTTGAGCCCCGAAAGTCTTGCCCTTTTGGATGCAATTTAG ATGGGTATGGAGGCATTTTGTGCTTATACTTCCTCATCTTCCTCTTCCTCCTCGAGCTTTTTGGCTCAGAAAAGGGACCAATCTGAGGACGTGAGGAGGGAATTTTCGAGTTATTCCAATAATAATCTTCACTGTGTTCGAAAGCCGATGGCGAAGCCATGGAAGAAGCCGGCGATTGCGCCACTGCCACCGACTCGGCCGAGGGTCTACAAAGTGGACCCACTTAACTTCCGGAATTTGGTTCAGAAACTCACCGGTTTGGCTGAGCTTCGATCTCCACGCCTCCAAAAGATGGCGCCACCACCGCTTGATATTGCCCGCTGTCCAGTCTCGAACGTTGCCGTCGTGGAAGCCTCCACGCTTCAGCCTTTGCCTGTGAGGCTGGACGAGGCGGTGGACGGTGGGAGCTTTCTCGAGCTCAACTTGTCGCCCTTCAACAAAAATTGGTGCTCTTTCCCTGCTTTGAGCCCCGAAAGTCTTGCCCTTTTGGATGCAATTTAG ATGGGTATGGAGGCATTTTGTGCTTATACTTCCTCATCTTCCTCTTCCTCCTCGAGCTTTTTGGCTCAGAAAAGGGACCAATCTGAGGACGTGAGGAGGGAATTTTCGAGTTATTCCAATAATAATCTTCACTGTGTTCGAAAGCCGATGGCGAAGCCATGGAAGAAGCCGGCGATTGCGCCACTGCCACCGACTCGGCCGAGGGTCTACAAAGTGGACCCACTTAACTTCCGGAATTTGGTTCAGAAACTCACCGGTTTGGCTGAGCTTCGATCTCCACGCCTCCAAAAGATGGCGCCACCACCGCTTGATATTGCCCGCTGTCCAGTCTCGAACGTTGCCGTCGTGGAAGCCTCCACGCTTCAGCCTTTGCCTGTGAGGCTGGACGAGGCGGTGGACGGTGGGAGCTTTCTCGAGCTCAACTTGTCGCCCTTCAACAAAAATTGGTGCTCTTTCCCTGCTTTGAGCCCCGAAAGTCTTGCCCTTTTGGATGCAATTTAG MGMEAFCAYTSSSSSSSSSFLAQKRDQSEDVRREFSSYSNNNLHCVRKPMAKPWKKPAIAPLPPTRPRVYKVDPLNFRNLVQKLTGLAELRSPRLQKMAPPPLDIARCPVSNVAVVEASTLQPLPVRLDEAVDGGSFLELNLSPFNKNWCSFPALSPESLALLDAI Homology
BLAST of Csor.00g058470 vs. ExPASy Swiss-Prot
Match: Q9SZG3 (VQ motif-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=VQ29 PE=1 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 6.9e-07 Identity = 30/76 (39.47%), Postives = 47/76 (61.84%), Query Frame = 0
BLAST of Csor.00g058470 vs. NCBI nr
Match: KAG6604115.1 (VQ motif-containing protein 29, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 330 bits (847), Expect = 3.87e-114 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of Csor.00g058470 vs. NCBI nr
Match: XP_022950153.1 (uncharacterized protein LOC111453330 [Cucurbita moschata] >KAG7034278.1 VQ motif-containing protein 29, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 327 bits (839), Expect = 6.43e-113 Identity = 165/166 (99.40%), Postives = 165/166 (99.40%), Query Frame = 0
BLAST of Csor.00g058470 vs. NCBI nr
Match: XP_022977273.1 (uncharacterized protein LOC111477640 [Cucurbita maxima]) HSP 1 Score: 299 bits (765), Expect = 9.37e-102 Identity = 154/166 (92.77%), Postives = 156/166 (93.98%), Query Frame = 0
BLAST of Csor.00g058470 vs. NCBI nr
Match: XP_038883814.1 (uncharacterized protein LOC120074676 [Benincasa hispida]) HSP 1 Score: 264 bits (674), Expect = 1.08e-87 Identity = 141/171 (82.46%), Postives = 153/171 (89.47%), Query Frame = 0
BLAST of Csor.00g058470 vs. NCBI nr
Match: XP_011657908.1 (uncharacterized protein LOC105435910 [Cucumis sativus]) HSP 1 Score: 253 bits (646), Expect = 1.81e-83 Identity = 134/169 (79.29%), Postives = 145/169 (85.80%), Query Frame = 0
BLAST of Csor.00g058470 vs. ExPASy TrEMBL
Match: A0A6J1GE45 (uncharacterized protein LOC111453330 OS=Cucurbita moschata OX=3662 GN=LOC111453330 PE=4 SV=1) HSP 1 Score: 327 bits (839), Expect = 3.11e-113 Identity = 165/166 (99.40%), Postives = 165/166 (99.40%), Query Frame = 0
BLAST of Csor.00g058470 vs. ExPASy TrEMBL
Match: A0A6J1IPH4 (uncharacterized protein LOC111477640 OS=Cucurbita maxima OX=3661 GN=LOC111477640 PE=4 SV=1) HSP 1 Score: 299 bits (765), Expect = 4.54e-102 Identity = 154/166 (92.77%), Postives = 156/166 (93.98%), Query Frame = 0
BLAST of Csor.00g058470 vs. ExPASy TrEMBL
Match: A0A0A0KJR2 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G495810 PE=4 SV=1) HSP 1 Score: 253 bits (646), Expect = 8.74e-84 Identity = 134/169 (79.29%), Postives = 145/169 (85.80%), Query Frame = 0
BLAST of Csor.00g058470 vs. ExPASy TrEMBL
Match: A0A1S3B142 (uncharacterized protein LOC103484869 OS=Cucumis melo OX=3656 GN=LOC103484869 PE=4 SV=1) HSP 1 Score: 252 bits (644), Expect = 1.89e-83 Identity = 133/170 (78.24%), Postives = 147/170 (86.47%), Query Frame = 0
BLAST of Csor.00g058470 vs. ExPASy TrEMBL
Match: A0A6J1HHA9 (uncharacterized protein LOC111463479 OS=Cucurbita moschata OX=3662 GN=LOC111463479 PE=4 SV=1) HSP 1 Score: 235 bits (600), Expect = 7.49e-77 Identity = 126/164 (76.83%), Postives = 135/164 (82.32%), Query Frame = 0
BLAST of Csor.00g058470 vs. TAIR 10
Match: AT2G22880.1 (VQ motif-containing protein ) HSP 1 Score: 63.9 bits (154), Expect = 1.4e-10 Identity = 41/123 (33.33%), Postives = 60/123 (48.78%), Query Frame = 0
BLAST of Csor.00g058470 vs. TAIR 10
Match: AT4G37710.1 (VQ motif-containing protein ) HSP 1 Score: 55.5 bits (132), Expect = 4.9e-08 Identity = 30/76 (39.47%), Postives = 47/76 (61.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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