Csor.00g058400 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g058400
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial
Location	Csor_Chr03: 7107193 .. 7110300 (-)
RNA-Seq Expression	Csor.00g058400
Synteny	Csor.00g058400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAATTCATTGCAGCGGATCTGGAGCAACAGTCGTGCTATTCGTGGTACTGTGGCTCCTCTCTGCAGGTCATTTTCTTCCGATTCCTTGGTTCAATTGAAGCCCGGCGAGATCGGTATGGTCTCTGGAATTCCAGACGAACACCTTACCAGAAGGGTAATAGCCCAGGCATTCATTTTTATCAATGAGTTTCTGATTGCTTGCGTTTTTGTTTAATTTCGAGGGATCGGGTTATTGGATGGTAACGATGTTTTTTTGGGGATTAGGTATTCTTATACCCGTCTGATTGGGTATTCTTGCTTGCTTTTAGCTGGGCATTTTTTGAATGGTCTGCAGTGGCTAAACCCATTAGGTGCTACTTTGTTAATACTATGTCGAAATGTAGACGGTTCCGATAAGGAGATGGAAATATCCGGTTTATTTTTCACTACGACATTACCATTGGTGTTGATAGTCTACTGATACCCAAAAAGTTGACTAAAATAAGGTTAAAGTCTGTAGGAGCCCAAGGTTCAATCACAAAGAACAACTGCACATTTCGTTTTTCGTTTTTACACTACTGTCTATTGCTATCGGTTGCCCTCTCTCTCAAGATCCTAATCAGTTACTTGGCAGAAATCATTTTTTTTTAATGTTGATTTAACAAAAGGCTTGATCAATTACTATCTCACAGTCTCTTTAAGTTATTCAGGACCAATTGTTGAATCATCCATTTTTTTGGCATGAAAGGCAAATGTTTTTTTTTTTTTTCTTCTAAATTTTTTGGACTATTGAACTTTGTCATGTATTGAGGTTTAATCTTGTGATTCTAATATGCCGAGCCATGGCATTGAATTTTCCTGTTGTTTAATCTTTTTCGATACAACCATCTCAATTCATTTATCTTCCTATTATGAAATTATATCAGGTTGTAATTTACTCTCCTGCTAGAACTGCATCCCAGCAAGGATCAGGCAAGGTTGGCAAGTGGAAAATCAATTTTATGTCAACGCAAAAGTATGAACCTTCTTTTCTTTCTTTTTCCTGAGTTTTATTTTTTAAAAAATCGGAAATTGTTGCTTCATTAGTTAACAGAAATTTGAACTTAGTTCTAGGAGATTCCTAGGTGCTTGAGCAAAATATTGTGCACAACATGTTTTACTGCGTAAACTTCAAGTGCCTAAAAGTTAATGATCCTTGTTCTCGTACTTTCAACAGTTGGGAGTTTTTCCCCTAATAATTTTTGTCTTTTATTTATTTATTTTTTTTTATTTATTATTATTTTTTTTTTACTTTTGTTGCTCTGCTCAGGCATTTCTTTTCCGTATTGCCTGTGTGTAATATTTCATTTATTTTCATAAAAGTTCGGTTTCTCATTTGAAAAAAGGAAAATACACAAACAGAAGGGTAAATAGTTTTTCTATGCTTATTGACATGTTTGTAGGTGGGAAAACCCATTGATGGGGTGGACTTCTACTGGGGACCCTTACGCCAACGTAGGGGATTCGGCACTGTCTTTTGATAGTGAGGAAGCTGCAAAGGAATTTGCTGACAAACATGGATGGGAATATGTGGTAATGCTTCGTTTAACCATTTAGAAAGGGAAAAAAAATATATATATATTCTTGTAATTTCTTTATGTAGTTTGAGTTGTCATATCTTAGGTTAGTTATTAACTATGTTATTTTTCCACTGTCAGTTGCCTCCAAATATGTAACAATTATAGCTGGTGGTGTTGGTTAATTGTCCATATATTCTAATATATTCTTTTTACCATAGATCTTCGCTTTTCCACAAGGTTAAAACAATGCGTTCTAATTCTAAATAAATATAACTAAAATGAAATTGCCCTTGGACATGGTCGTTTAATATGTTTCTTCAGAATAACAAATGTGTTTCACGATTTCTGCATTTGGGCTATGATATGGCGTTTGATTCTGAATGTAAGATTTTACTTTTGAAGACAGTGGAAATGAATTCTGTTTTTTAACATCCTAGTATTAGTTTAAAGCTAAAAATTCGGAAATTTCGAGAGGAGAAATTTGGGGGGAGAAATGCCAATTTTTCTTCCAAATTTGGTCCATTAGATGCAGAGAGTTCATTTTCCTTATTTAGCATTCGGTTGACATTGCATTACAATTTTATCATCATCGGATTCTGTAGAGTGGACTCTTAAAGGACTTCTTTTTCTTTTTAATTGCTTCCTTCATGTTCAGATTTAGGGATCACTTTTCTGGCCTGCATATAATTATGAGGTTACATTGAGACAATCCCCAAACTGAGGGTTAATTTCTAATTCATTCGTTGATTTTTTGTTTTTTCTCTCTCCTTTTTGTAGGTTAAGAAGCGCCACACACCACTTTTGAAGGTTTGAGATTCTTTCCCATTATTTTAACTTCGTTGAGCTTGTATTTTGTCTATACTTCTGTGAATGTAATTTGGGAGAAGAGGGGGAGGGGGGAGGAGTGGTTTGCTGGCCCTCCATAGTGTTCACACTGAACCGTAGATTGATTCGTCCCTTGAGCTCTCTGGCAGTTGTGCAAACTTCCAACTATTTTCTTGGAATGATCCTCTTGTGTCAAATTTCATTCTTTTATCTTATGCAACTTCTTTCATAATCTTTTAGAGTTCTGCTGGCATTTTATTGTATCCTCCGGTTTTTGTGGCCTTCAGGGCATTTGGTATGGGAATTATAAATCTTTTTTGCAATCTAGAGTCTTCTTGTGGCTAGTTTAGGGGAGCTCAGTGTCAGTTTCCAATTGGTACCAGTAGTTATTTCTTAGTATATGCTAATTCTTTCCTAGATGACTTTATATCAGTTCTCATTGTTACGACTGGAGTAGTTTAGATGCCCTACCAGCTCAGATTTCCTTTTAGATAGATGAGGAGAAGGAGGATGAAGATCTTGCTATTGGTTTGAAAGTTAATCATGTTAACATTCCAGTAATGAAGGGATTTTGATGCTGCTTTGTTTCTTAATGTCATCTAACCCTTGGATGTCTTTAGTTCACCGGGATAACCCAAAATAAAGAAACAGAAACTTATAACCCTCTGTTTTGACTGCAGGTGAAGGCATATGCGGACAATTTCAAGTGGAAGGGCCATCCTGAAGCCAAGGAGGCTTAA

mRNA sequence

ATGGCTAATTCATTGCAGCGGATCTGGAGCAACAGTCGTGCTATTCGTGGTACTGTGGCTCCTCTCTGCAGGTCATTTTCTTCCGATTCCTTGGTTCAATTGAAGCCCGGCGAGATCGGTATGGTCTCTGGAATTCCAGACGAACACCTTACCAGAAGGGTTGTAATTTACTCTCCTGCTAGAACTGCATCCCAGCAAGGATCAGGCAAGGTTGGCAAGTGGAAAATCAATTTTATGTCAACGCAAAAGTGGGAAAACCCATTGATGGGGTGGACTTCTACTGGGGACCCTTACGCCAACGTAGGGGATTCGGCACTGTCTTTTGATAGTGAGGAAGCTGCAAAGGAATTTGCTGACAAACATGGATGGGAATATGTGGTTAAGAAGCGCCACACACCACTTTTGAAGGTGAAGGCATATGCGGACAATTTCAAGTGGAAGGGCCATCCTGAAGCCAAGGAGGCTTAA

Coding sequence (CDS)

ATGGCTAATTCATTGCAGCGGATCTGGAGCAACAGTCGTGCTATTCGTGGTACTGTGGCTCCTCTCTGCAGGTCATTTTCTTCCGATTCCTTGGTTCAATTGAAGCCCGGCGAGATCGGTATGGTCTCTGGAATTCCAGACGAACACCTTACCAGAAGGGTTGTAATTTACTCTCCTGCTAGAACTGCATCCCAGCAAGGATCAGGCAAGGTTGGCAAGTGGAAAATCAATTTTATGTCAACGCAAAAGTGGGAAAACCCATTGATGGGGTGGACTTCTACTGGGGACCCTTACGCCAACGTAGGGGATTCGGCACTGTCTTTTGATAGTGAGGAAGCTGCAAAGGAATTTGCTGACAAACATGGATGGGAATATGTGGTTAAGAAGCGCCACACACCACTTTTGAAGGTGAAGGCATATGCGGACAATTTCAAGTGGAAGGGCCATCCTGAAGCCAAGGAGGCTTAA

Protein sequence

MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADKHGWEYVVKKRHTPLLKVKAYADNFKWKGHPEAKEA

Homology

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BLAST of Csor.00g058400 vs. ExPASy Swiss-Prot
Match: Q9FJW4 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=FRO1 PE=1 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 3.3e-56
Identity = 100/139 (71.94%), Postives = 123/139 (88.49%), Query Frame = 0


Query: 15  IRGTVAPLCRSFSSDSLVQ--LKPGEIGMVSGIPDEHLTRRVVIYSPARTASQQGSGKVG 74
           I  T+  + R F++D++V+   K GEIG VSGIP+EHL+R+V+IYSPARTA+Q GSGK+G
Sbjct: 13  IAATLRRVARPFATDAVVESDYKRGEIGKVSGIPEEHLSRKVIIYSPARTATQSGSGKLG 72

Query: 75  KWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADKHGWEYVVKKRHT 134
           KWKINF+ST KWENPLMGWTSTGDPYANVGDSAL+FDSEEAAK FA++HGW+Y VKK +T
Sbjct: 73  KWKINFVSTLKWENPLMGWTSTGDPYANVGDSALAFDSEEAAKSFAERHGWDYKVKKPNT 132

Query: 135 PLLKVKAYADNFKWKGHPE 152
           PLLKVK+Y+DNFKWKG+P+
Sbjct: 133 PLLKVKSYSDNFKWKGNPQ 151

[Close]

BLAST of Csor.00g058400 vs. ExPASy Swiss-Prot
Match: Q5XIF3 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs4 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.7e-23
Identity = 50/110 (45.45%), Postives = 71/110 (64.55%), Query Frame = 0


Query: 38  EIGMVSGIPDEHL-TRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGD 97
           ++  ++G+P+EH+ TR+V I+ PAR   Q G     KWK+ F + ++WENPLMGW ST D
Sbjct: 60  DVTPLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTAD 119

Query: 98  PYANVGDSALSFDSEEAAKEFADKHGWEYVVKKRHTPLLKVKAYADNFKW 147
           P +N+    L+F ++E A  FA+KHGW Y V+ R  P  K K+Y  NF W
Sbjct: 120 PLSNM---VLTFSAKEDAVAFAEKHGWSYDVEGRKVPKPKSKSYGANFSW 166

[Close]

BLAST of Csor.00g058400 vs. ExPASy Swiss-Prot
Match: Q0MQH0 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Gorilla gorilla gorilla OX=9595 GN=NDUFS4 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.4e-23
Identity = 49/110 (44.55%), Postives = 72/110 (65.45%), Query Frame = 0


Query: 38  EIGMVSGIPDEHL-TRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGD 97
           +I  ++G+P+EH+ TR+V I+ PAR   Q G     KWK+ F + ++WENPLMGW ST D
Sbjct: 60  DITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTAD 119

Query: 98  PYANVGDSALSFDSEEAAKEFADKHGWEYVVKKRHTPLLKVKAYADNFKW 147
           P +N+    L+F ++E A  FA+K+GW Y +++R  P  K K+Y  NF W
Sbjct: 120 PLSNM---VLTFSTKEDAVSFAEKNGWSYDIEERKVPKPKSKSYGANFSW 166

[Close]

BLAST of Csor.00g058400 vs. ExPASy Swiss-Prot
Match: O43181 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Homo sapiens OX=9606 GN=NDUFS4 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.4e-23
Identity = 49/110 (44.55%), Postives = 72/110 (65.45%), Query Frame = 0


Query: 38  EIGMVSGIPDEHL-TRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGD 97
           +I  ++G+P+EH+ TR+V I+ PAR   Q G     KWK+ F + ++WENPLMGW ST D
Sbjct: 60  DITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTAD 119

Query: 98  PYANVGDSALSFDSEEAAKEFADKHGWEYVVKKRHTPLLKVKAYADNFKW 147
           P +N+    L+F ++E A  FA+K+GW Y +++R  P  K K+Y  NF W
Sbjct: 120 PLSNM---VLTFSTKEDAVSFAEKNGWSYDIEERKVPKPKSKSYGANFSW 166

[Close]

BLAST of Csor.00g058400 vs. ExPASy Swiss-Prot
Match: P0CB95 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Pongo abelii OX=9601 GN=NDUFS4 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 8.3e-23
Identity = 50/110 (45.45%), Postives = 72/110 (65.45%), Query Frame = 0


Query: 38  EIGMVSGIPDEHL-TRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGD 97
           +I  ++G+P+EH+ TR+V I+ PAR   Q G     KWK+ F + ++WENPLMGW ST D
Sbjct: 60  DITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTAD 119

Query: 98  PYANVGDSALSFDSEEAAKEFADKHGWEYVVKKRHTPLLKVKAYADNFKW 147
           P +N+    L+F ++E A  FA+K+GW Y V++R  P  K K+Y  NF W
Sbjct: 120 PLSNM---VLTFRTKEDAVSFAEKNGWSYDVEERKVPKPKSKSYGANFSW 166

[Close]

BLAST of Csor.00g058400 vs. NCBI nr
Match: XP_022950018.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucurbita moschata] >KAG6604122.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 321 bits (823), Expect = 7.69e-111
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60
           MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA
Sbjct: 1   MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60

Query: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120
           RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK
Sbjct: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120

Query: 121 HGWEYVVKKRHTPLLKVKAYADNFKWKGHPEAKEA 155
           HGWEYVVKKRHTPLLKVKAYADNFKWKGHPEAKEA
Sbjct: 121 HGWEYVVKKRHTPLLKVKAYADNFKWKGHPEAKEA 155

[Close]

BLAST of Csor.00g058400 vs. NCBI nr
Match: XP_022977437.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 320 bits (821), Expect = 1.55e-110
Identity = 154/155 (99.35%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60
           MANSLQRIWSNSRA+RGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA
Sbjct: 1   MANSLQRIWSNSRALRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60

Query: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120
           RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK
Sbjct: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120

Query: 121 HGWEYVVKKRHTPLLKVKAYADNFKWKGHPEAKEA 155
           HGWEYVVKKRHTPLLKVKAYADNFKWKGHPEAKEA
Sbjct: 121 HGWEYVVKKRHTPLLKVKAYADNFKWKGHPEAKEA 155

[Close]

BLAST of Csor.00g058400 vs. NCBI nr
Match: XP_023543137.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 313 bits (802), Expect = 1.23e-107
Identity = 150/155 (96.77%), Postives = 151/155 (97.42%), Query Frame = 0


Query: 1   MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60
           MAN LQRIWSNSRA+RGTVAP CR FSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA
Sbjct: 1   MANPLQRIWSNSRALRGTVAPFCRPFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60

Query: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120
           RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK
Sbjct: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120

Query: 121 HGWEYVVKKRHTPLLKVKAYADNFKWKGHPEAKEA 155
           HGWEYVVKK HTPLLKVKAYADNFKWKGHPEAKEA
Sbjct: 121 HGWEYVVKKHHTPLLKVKAYADNFKWKGHPEAKEA 155

[Close]

BLAST of Csor.00g058400 vs. NCBI nr
Match: KAG7034286.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 302 bits (773), Expect = 1.25e-102
Identity = 155/194 (79.90%), Postives = 155/194 (79.90%), Query Frame = 0


Query: 1   MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60
           MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA
Sbjct: 1   MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60

Query: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120
           RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK
Sbjct: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120

Query: 121 HGWEYVVKKRHTPLLK---------------------------------------VKAYA 155
           HGWEYVVKKRHTPLLK                                       VKAYA
Sbjct: 121 HGWEYVVKKRHTPLLKSSAGILLYPPVFVAFRAFDEEKEDEDLAIGLKVNHVNIPVKAYA 180

[Close]

BLAST of Csor.00g058400 vs. NCBI nr
Match: XP_038881462.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Benincasa hispida])

HSP 1 Score: 300 bits (769), Expect = 1.32e-102
Identity = 143/155 (92.26%), Postives = 151/155 (97.42%), Query Frame = 0


Query: 1   MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60
           MANSLQRIWS+  A+RGTVAPLCRSFS+DSLVQ+KPGEIGMVSGIP+EHLTRRV+IYSPA
Sbjct: 1   MANSLQRIWSHGCALRGTVAPLCRSFSTDSLVQVKPGEIGMVSGIPEEHLTRRVIIYSPA 60

Query: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120
           RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAK FA+K
Sbjct: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEK 120

Query: 121 HGWEYVVKKRHTPLLKVKAYADNFKWKGHPEAKEA 155
           HGWEYVV+KRHTPLLKVKAYADNFKWKG PEAKEA
Sbjct: 121 HGWEYVVQKRHTPLLKVKAYADNFKWKGPPEAKEA 155

[Close]

BLAST of Csor.00g058400 vs. ExPASy TrEMBL
Match: A0A6J1GDQ9 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111453236 PE=3 SV=1)

HSP 1 Score: 321 bits (823), Expect = 3.72e-111
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60
           MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA
Sbjct: 1   MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60

Query: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120
           RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK
Sbjct: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120

Query: 121 HGWEYVVKKRHTPLLKVKAYADNFKWKGHPEAKEA 155
           HGWEYVVKKRHTPLLKVKAYADNFKWKGHPEAKEA
Sbjct: 121 HGWEYVVKKRHTPLLKVKAYADNFKWKGHPEAKEA 155

[Close]

BLAST of Csor.00g058400 vs. ExPASy TrEMBL
Match: A0A6J1IIF4 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111477781 PE=3 SV=1)

HSP 1 Score: 320 bits (821), Expect = 7.51e-111
Identity = 154/155 (99.35%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60
           MANSLQRIWSNSRA+RGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA
Sbjct: 1   MANSLQRIWSNSRALRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60

Query: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120
           RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK
Sbjct: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120

Query: 121 HGWEYVVKKRHTPLLKVKAYADNFKWKGHPEAKEA 155
           HGWEYVVKKRHTPLLKVKAYADNFKWKGHPEAKEA
Sbjct: 121 HGWEYVVKKRHTPLLKVKAYADNFKWKGHPEAKEA 155

[Close]

BLAST of Csor.00g058400 vs. ExPASy TrEMBL
Match: A0A6J1HE01 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111463327 PE=3 SV=1)

HSP 1 Score: 299 bits (765), Expect = 2.61e-102
Identity = 141/155 (90.97%), Postives = 149/155 (96.13%), Query Frame = 0


Query: 1   MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60
           MANSLQRIW+   A+RGT+APLCRSFS+DSLV++KPGEIGMVSGIP+EHLTRRVVIYSPA
Sbjct: 1   MANSLQRIWNRGCALRGTMAPLCRSFSADSLVEVKPGEIGMVSGIPEEHLTRRVVIYSPA 60

Query: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120
           RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAK FA+K
Sbjct: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEK 120

Query: 121 HGWEYVVKKRHTPLLKVKAYADNFKWKGHPEAKEA 155
           HGWEYVVKKRHTPLLK KAYADNFKWKGHPE KEA
Sbjct: 121 HGWEYVVKKRHTPLLKAKAYADNFKWKGHPEPKEA 155

[Close]

BLAST of Csor.00g058400 vs. ExPASy TrEMBL
Match: A0A6J1KR46 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111496890 PE=3 SV=1)

HSP 1 Score: 299 bits (765), Expect = 2.61e-102
Identity = 141/155 (90.97%), Postives = 149/155 (96.13%), Query Frame = 0


Query: 1   MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60
           MANSLQRIW+   A+RGT+APLCRSFS+DSLV++KPGEIGMVSGIP+EHLTRRVVIYSPA
Sbjct: 1   MANSLQRIWNRGCALRGTMAPLCRSFSADSLVEVKPGEIGMVSGIPEEHLTRRVVIYSPA 60

Query: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120
           RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAK FA+K
Sbjct: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEK 120

Query: 121 HGWEYVVKKRHTPLLKVKAYADNFKWKGHPEAKEA 155
           HGWEYVVKKRHTPLLK KAYADNFKWKGHPE KEA
Sbjct: 121 HGWEYVVKKRHTPLLKAKAYADNFKWKGHPEPKEA 155

[Close]

BLAST of Csor.00g058400 vs. ExPASy TrEMBL
Match: A0A6J1BSY3 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111005430 PE=3 SV=1)

HSP 1 Score: 297 bits (760), Expect = 1.51e-101
Identity = 141/155 (90.97%), Postives = 150/155 (96.77%), Query Frame = 0


Query: 1   MANSLQRIWSNSRAIRGTVAPLCRSFSSDSLVQLKPGEIGMVSGIPDEHLTRRVVIYSPA 60
           MANSLQRIW++   +RGT+APLCRSFS+DSLVQ+KPGEIGMVSGIP+EHLTRRVVIYSPA
Sbjct: 1   MANSLQRIWNHRCGLRGTLAPLCRSFSADSLVQVKPGEIGMVSGIPEEHLTRRVVIYSPA 60

Query: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADK 120
           RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAK FA+K
Sbjct: 61  RTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKAFAEK 120

Query: 121 HGWEYVVKKRHTPLLKVKAYADNFKWKGHPEAKEA 155
           HGW+YVVKKRHTPLLKVKAYADNFKWKG PEAKEA
Sbjct: 121 HGWDYVVKKRHTPLLKVKAYADNFKWKGPPEAKEA 155

[Close]

BLAST of Csor.00g058400 vs. TAIR 10
Match: AT5G67590.1 (NADH-ubiquinone oxidoreductase-related )

HSP 1 Score: 219.2 bits (557), Expect = 2.4e-57
Identity = 100/139 (71.94%), Postives = 123/139 (88.49%), Query Frame = 0


Query: 15  IRGTVAPLCRSFSSDSLVQ--LKPGEIGMVSGIPDEHLTRRVVIYSPARTASQQGSGKVG 74
           I  T+  + R F++D++V+   K GEIG VSGIP+EHL+R+V+IYSPARTA+Q GSGK+G
Sbjct: 13  IAATLRRVARPFATDAVVESDYKRGEIGKVSGIPEEHLSRKVIIYSPARTATQSGSGKLG 72

Query: 75  KWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAAKEFADKHGWEYVVKKRHT 134
           KWKINF+ST KWENPLMGWTSTGDPYANVGDSAL+FDSEEAAK FA++HGW+Y VKK +T
Sbjct: 73  KWKINFVSTLKWENPLMGWTSTGDPYANVGDSALAFDSEEAAKSFAERHGWDYKVKKPNT 132

Query: 135 PLLKVKAYADNFKWKGHPE 152
           PLLKVK+Y+DNFKWKG+P+
Sbjct: 133 PLLKVKSYSDNFKWKGNPQ 151

The following BLAST results are available for this feature:

BLAST of Csor.00g058400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJW4	3.3e-56	71.94	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Arabidop...	[more]
Q5XIF3	3.7e-23	45.45	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Rattus n...	[more]
Q0MQH0	6.4e-23	44.55	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Gorilla ...	[more]
O43181	6.4e-23	44.55	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Homo sap...	[more]
P0CB95	8.3e-23	45.45	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Pongo ab...	[more]

BLAST of Csor.00g058400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022950018.1	7.69e-111	100.00	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucur...	[more]
XP_022977437.1	1.55e-110	99.35	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucur...	[more]
XP_023543137.1	1.23e-107	96.77	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucur...	[more]
KAG7034286.1	1.25e-102	79.90	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, partial [C...	[more]
XP_038881462.1	1.32e-102	92.26	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Benincasa ...	[more]

BLAST of Csor.00g058400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GDQ9	3.72e-111	100.00	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucurbit...	[more]
A0A6J1IIF4	7.51e-111	99.35	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucurbit...	[more]
A0A6J1HE01	2.61e-102	90.97	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucurbit...	[more]
A0A6J1KR46	2.61e-102	90.97	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucurbit...	[more]
A0A6J1BSY3	1.51e-101	90.97	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Momordic...	[more]

BLAST of Csor.00g058400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67590.1	2.4e-57	71.94	NADH-ubiquinone oxidoreductase-related	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006885	NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial	PFAM	PF04800	ETC_C1_NDUFA4	coord: 53..148 e-value: 1.3E-32 score: 112.0
IPR006885	NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial	PANTHER	PTHR12219	NADH-UBIQUINONE OXIDOREDUCTASE	coord: 13..154
IPR038532	NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamily	GENE3D	3.30.160.190	atu1810 like domain	coord: 52..127 e-value: 1.4E-33 score: 116.6
None	No IPR available	PANTHER	PTHR12219:SF23	NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 4, MITOCHONDRIAL-LIKE	coord: 13..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g058400.m01	Csor.00g058400.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0070469	respirasome
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H