Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTGCTTGGACTCGTACAAGAGCCCAGATCAGAAGGGACACTACCCGCCGATGAGCCCAAGATTGTCCTTTTCCAATGACTTCGTCGAATCCCATCACTCCACCAACACCAACACCAACACCCATATAAGTCAACATCAAAACAGCCCTCCAAATATTTCGGCCTCCGACGACTTCGAATTCTCTGCACTCACCAATCCCAGTAATCACACAATGACCGCCGCCGACGAGCTCTTCTTCAAGGGGAAATTGTTGCCCACTCTCAGAGATGAGCTTCTCCTTCACGATGACGACGACGCTATTGTAGTGCCGTCGTTCGTGCCCCCGAAAGGCCTACCAAAATGGAAAGAGTTTCTCAGCCTCAAGAGATCGGTTGTTGATGGGCGCTGCACGAGCACGGGCGCCGACAACGACAACAATCAAGGCAAAATGCCCAAGTTGGCCCTCCATGATAAGTCATCGCATCTTGACATGACTTCGTAG
mRNA sequence
ATGGCTTGCTTGGACTCGTACAAGAGCCCAGATCAGAAGGGACACTACCCGCCGATGAGCCCAAGATTGTCCTTTTCCAATGACTTCGTCGAATCCCATCACTCCACCAACACCAACACCAACACCCATATAAGTCAACATCAAAACAGCCCTCCAAATATTTCGGCCTCCGACGACTTCGAATTCTCTGCACTCACCAATCCCAGTAATCACACAATGACCGCCGCCGACGAGCTCTTCTTCAAGGGGAAATTGTTGCCCACTCTCAGAGATGAGCTTCTCCTTCACGATGACGACGACGCTATTGTAGTGCCGTCGTTCGTGCCCCCGAAAGGCCTACCAAAATGGAAAGAGTTTCTCAGCCTCAAGAGATCGGTTGTTGATGGGCGCTGCACGAGCACGGGCGCCGACAACGACAACAATCAAGGCAAAATGCCCAAGTTGGCCCTCCATGATAAGTCATCGCATCTTGACATGACTTCGTAG
Coding sequence (CDS)
ATGGCTTGCTTGGACTCGTACAAGAGCCCAGATCAGAAGGGACACTACCCGCCGATGAGCCCAAGATTGTCCTTTTCCAATGACTTCGTCGAATCCCATCACTCCACCAACACCAACACCAACACCCATATAAGTCAACATCAAAACAGCCCTCCAAATATTTCGGCCTCCGACGACTTCGAATTCTCTGCACTCACCAATCCCAGTAATCACACAATGACCGCCGCCGACGAGCTCTTCTTCAAGGGGAAATTGTTGCCCACTCTCAGAGATGAGCTTCTCCTTCACGATGACGACGACGCTATTGTAGTGCCGTCGTTCGTGCCCCCGAAAGGCCTACCAAAATGGAAAGAGTTTCTCAGCCTCAAGAGATCGGTTGTTGATGGGCGCTGCACGAGCACGGGCGCCGACAACGACAACAATCAAGGCAAAATGCCCAAGTTGGCCCTCCATGATAAGTCATCGCATCTTGACATGACTTCGTAG
Protein sequence
MACLDSYKSPDQKGHYPPMSPRLSFSNDFVESHHSTNTNTNTHISQHQNSPPNISASDDFEFSALTNPSNHTMTAADELFFKGKLLPTLRDELLLHDDDDAIVVPSFVPPKGLPKWKEFLSLKRSVVDGRCTSTGADNDNNQGKMPKLALHDKSSHLDMTS
Homology
BLAST of Csor.00g057780 vs. NCBI nr
Match:
KAG6604184.1 (hypothetical protein SDJN03_04793, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 333 bits (855), Expect = 1.59e-115
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
Query: 1 MACLDSYKSPDQKGHYPPMSPRLSFSNDFVESHHSTNTNTNTHISQHQNSPPNISASDDF 60
MACLDSYKSPDQKGHYPPMSPRLSFSNDFVESHHSTNTNTNTHISQHQNSPPNISASDDF
Sbjct: 1 MACLDSYKSPDQKGHYPPMSPRLSFSNDFVESHHSTNTNTNTHISQHQNSPPNISASDDF 60
Query: 61 EFSALTNPSNHTMTAADELFFKGKLLPTLRDELLLHDDDDAIVVPSFVPPKGLPKWKEFL 120
EFSALTNPSNHTMTAADELFFKGKLLPTLRDELLLHDDDDAIVVPSFVPPKGLPKWKEFL
Sbjct: 61 EFSALTNPSNHTMTAADELFFKGKLLPTLRDELLLHDDDDAIVVPSFVPPKGLPKWKEFL 120
Query: 121 SLKRSVVDGRCTSTGADNDNNQGKMPKLALHDKSSHLDMTS 161
SLKRSVVDGRCTSTGADNDNNQGKMPKLALHDKSSHLDMTS
Sbjct: 121 SLKRSVVDGRCTSTGADNDNNQGKMPKLALHDKSSHLDMTS 161
BLAST of Csor.00g057780 vs. NCBI nr
Match:
XP_023544728.1 (uncharacterized protein LOC111804229 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 324 bits (830), Expect = 1.07e-111
Identity = 158/162 (97.53%), Postives = 158/162 (97.53%), Query Frame = 0
Query: 1 MACLDSYKSPDQKGHYPPMSPRLSFSNDFVESHHSTNTNTNTHISQHQNSPPNISASDDF 60
MACLDSYKSPDQKGHYPPMSPRLSFSNDFVESHH TNTNTNTHISQHQNSPPNISASDDF
Sbjct: 1 MACLDSYKSPDQKGHYPPMSPRLSFSNDFVESHHPTNTNTNTHISQHQNSPPNISASDDF 60
Query: 61 EFSALTNPSNHTMTAADELFFKGKLLPTLRDELLLHDDDD-AIVVPSFVPPKGLPKWKEF 120
EFSALTNPSNHTMTAADELFFKGKLLPTLRDELLLHDDDD AIVVPSFVPPKGLPKWKEF
Sbjct: 61 EFSALTNPSNHTMTAADELFFKGKLLPTLRDELLLHDDDDDAIVVPSFVPPKGLPKWKEF 120
Query: 121 LSLKRSVVDGRCTSTGADNDNNQGKMPKLALHDKSSHLDMTS 161
LSLKRSVVDGRCT TG DNDNNQGKMPKLALHDKSSHLDMTS
Sbjct: 121 LSLKRSVVDGRCTGTGTDNDNNQGKMPKLALHDKSSHLDMTS 162
BLAST of Csor.00g057780 vs. NCBI nr
Match:
XP_022950341.1 (uncharacterized protein LOC111453452 [Cucurbita moschata])
HSP 1 Score: 320 bits (819), Expect = 5.11e-110
Identity = 156/162 (96.30%), Postives = 157/162 (96.91%), Query Frame = 0
Query: 1 MACLDSYKSPDQKGHYPPMSPRLSFSNDFVESHHSTNTNTNTHISQHQNSPPNISASDDF 60
MACLDSYKSPDQKGHYPPMSPRLSFSNDFVESHHSTNTNTNTHISQHQN PPNISASDDF
Sbjct: 1 MACLDSYKSPDQKGHYPPMSPRLSFSNDFVESHHSTNTNTNTHISQHQNIPPNISASDDF 60
Query: 61 EFSALTNPSNHTMTAADELFFKGKLLPTLRDELLLHDDDD-AIVVPSFVPPKGLPKWKEF 120
EFSALTNPSNHTMTAADELFFKGKLLPTLRDELLLHDDDD AIVVPSFVPPKGLPKWKEF
Sbjct: 61 EFSALTNPSNHTMTAADELFFKGKLLPTLRDELLLHDDDDDAIVVPSFVPPKGLPKWKEF 120
Query: 121 LSLKRSVVDGRCTSTGADNDNNQGKMPKLALHDKSSHLDMTS 161
LSLKRSVVDGRCT TG NDNNQGKMPKLALHDKSSH+DMTS
Sbjct: 121 LSLKRSVVDGRCTGTGTHNDNNQGKMPKLALHDKSSHVDMTS 162
BLAST of Csor.00g057780 vs. NCBI nr
Match:
KAG7034345.1 (hypothetical protein SDJN02_04072, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 315 bits (808), Expect = 2.05e-108
Identity = 154/161 (95.65%), Postives = 155/161 (96.27%), Query Frame = 0
Query: 1 MACLDSYKSPDQKGHYPPMSPRLSFSNDFVESHHSTNTNTNTHISQHQNSPPNISASDDF 60
MACLDSYKSPDQKGHYPPMSPRLSFSNDFVESHHSTNT HISQHQNSPPNISASDDF
Sbjct: 1 MACLDSYKSPDQKGHYPPMSPRLSFSNDFVESHHSTNT----HISQHQNSPPNISASDDF 60
Query: 61 EFSALTNPSNHTMTAADELFFKGKLLPTLRDELLLHDDDDAIVVPSFVPPKGLPKWKEFL 120
EFSALTNPSNHTMTAADELFFKGKLLPTLRDELLLHDDDDAI VPSFVPPKGLPKWKEFL
Sbjct: 61 EFSALTNPSNHTMTAADELFFKGKLLPTLRDELLLHDDDDAIAVPSFVPPKGLPKWKEFL 120
Query: 121 SLKRSVVDGRCTSTGADNDNNQGKMPKLALHDKSSHLDMTS 161
SLKRSVVDGRCT TGADNDNNQGKMPKLALHDKSSHLDM+S
Sbjct: 121 SLKRSVVDGRCTGTGADNDNNQGKMPKLALHDKSSHLDMSS 157
BLAST of Csor.00g057780 vs. NCBI nr
Match:
XP_022977871.1 (uncharacterized protein LOC111478032 [Cucurbita maxima])
HSP 1 Score: 303 bits (776), Expect = 1.91e-103
Identity = 153/164 (93.29%), Postives = 153/164 (93.29%), Query Frame = 0
Query: 1 MACLDSYKSPDQKGHYPPMSPRLSFSNDFVESHHSTNTNTNTHISQHQNSPPNISASDDF 60
MACLDSYKSPDQKGHYPPMSPRLSFSNDFVESHHSTNTNT HISQHQN PPNIS SDDF
Sbjct: 1 MACLDSYKSPDQKGHYPPMSPRLSFSNDFVESHHSTNTNT--HISQHQNIPPNISVSDDF 60
Query: 61 EFSALTNPSNHTMTAADELFFKGKLLPTLRDELLLHDDDD--AIVVPSFVPPKGLPKWKE 120
EFSALTNPSNHTMTAADELFFKGKLLPTLRDELLL DDDD AIVVPSFVPPKGLPKWKE
Sbjct: 61 EFSALTNPSNHTMTAADELFFKGKLLPTLRDELLLQDDDDDDAIVVPSFVPPKGLPKWKE 120
Query: 121 FLSLKRSVVDGRCTSTGA--DNDNNQGKMPKLALHDKSSHLDMT 160
FLSLKRSVVDGRCT TG DNDNNQGKMPKLALHDKSSHLDMT
Sbjct: 121 FLSLKRSVVDGRCTGTGTGTDNDNNQGKMPKLALHDKSSHLDMT 162
BLAST of Csor.00g057780 vs. ExPASy TrEMBL
Match:
A0A6J1GEJ6 (uncharacterized protein LOC111453452 OS=Cucurbita moschata OX=3662 GN=LOC111453452 PE=4 SV=1)
HSP 1 Score: 320 bits (819), Expect = 2.48e-110
Identity = 156/162 (96.30%), Postives = 157/162 (96.91%), Query Frame = 0
Query: 1 MACLDSYKSPDQKGHYPPMSPRLSFSNDFVESHHSTNTNTNTHISQHQNSPPNISASDDF 60
MACLDSYKSPDQKGHYPPMSPRLSFSNDFVESHHSTNTNTNTHISQHQN PPNISASDDF
Sbjct: 1 MACLDSYKSPDQKGHYPPMSPRLSFSNDFVESHHSTNTNTNTHISQHQNIPPNISASDDF 60
Query: 61 EFSALTNPSNHTMTAADELFFKGKLLPTLRDELLLHDDDD-AIVVPSFVPPKGLPKWKEF 120
EFSALTNPSNHTMTAADELFFKGKLLPTLRDELLLHDDDD AIVVPSFVPPKGLPKWKEF
Sbjct: 61 EFSALTNPSNHTMTAADELFFKGKLLPTLRDELLLHDDDDDAIVVPSFVPPKGLPKWKEF 120
Query: 121 LSLKRSVVDGRCTSTGADNDNNQGKMPKLALHDKSSHLDMTS 161
LSLKRSVVDGRCT TG NDNNQGKMPKLALHDKSSH+DMTS
Sbjct: 121 LSLKRSVVDGRCTGTGTHNDNNQGKMPKLALHDKSSHVDMTS 162
BLAST of Csor.00g057780 vs. ExPASy TrEMBL
Match:
A0A6J1IL61 (uncharacterized protein LOC111478032 OS=Cucurbita maxima OX=3661 GN=LOC111478032 PE=4 SV=1)
HSP 1 Score: 303 bits (776), Expect = 9.25e-104
Identity = 153/164 (93.29%), Postives = 153/164 (93.29%), Query Frame = 0
Query: 1 MACLDSYKSPDQKGHYPPMSPRLSFSNDFVESHHSTNTNTNTHISQHQNSPPNISASDDF 60
MACLDSYKSPDQKGHYPPMSPRLSFSNDFVESHHSTNTNT HISQHQN PPNIS SDDF
Sbjct: 1 MACLDSYKSPDQKGHYPPMSPRLSFSNDFVESHHSTNTNT--HISQHQNIPPNISVSDDF 60
Query: 61 EFSALTNPSNHTMTAADELFFKGKLLPTLRDELLLHDDDD--AIVVPSFVPPKGLPKWKE 120
EFSALTNPSNHTMTAADELFFKGKLLPTLRDELLL DDDD AIVVPSFVPPKGLPKWKE
Sbjct: 61 EFSALTNPSNHTMTAADELFFKGKLLPTLRDELLLQDDDDDDAIVVPSFVPPKGLPKWKE 120
Query: 121 FLSLKRSVVDGRCTSTGA--DNDNNQGKMPKLALHDKSSHLDMT 160
FLSLKRSVVDGRCT TG DNDNNQGKMPKLALHDKSSHLDMT
Sbjct: 121 FLSLKRSVVDGRCTGTGTGTDNDNNQGKMPKLALHDKSSHLDMT 162
BLAST of Csor.00g057780 vs. ExPASy TrEMBL
Match:
A0A0A0KIB7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490830 PE=4 SV=1)
HSP 1 Score: 193 bits (490), Expect = 3.38e-60
Identity = 111/167 (66.47%), Postives = 128/167 (76.65%), Query Frame = 0
Query: 1 MACLDSYKSP-DQKGHYPPMSPRLSFSNDFVESHHSTNTNTNTHISQHQNSPPNISASDD 60
MACLD+YK+ DQKG +PPMSPRLSFSNDFVES ++ + + T+ Q PNI SDD
Sbjct: 2 MACLDTYKNKSDQKGQFPPMSPRLSFSNDFVESSNNPSPTSTTNNIQDPKILPNIPPSDD 61
Query: 61 FEFSALTNPSNHT-MTAADELFFKGKLLPTLRDELLLHDDDDAIVVPSFVPPKG-LPKWK 120
FEFS NP+NHT MTAAD+LFFKGKLLPTLRDELL+ DDD+ VPPKG LPKWK
Sbjct: 62 FEFSP--NPTNHTAMTAADQLFFKGKLLPTLRDELLIDDDDEDFAP---VPPKGGLPKWK 121
Query: 121 EFLSLKRSVVDGRCTST--GADNDNNQGKMPKLALHDKSS-HLDMTS 161
EFLSLKRSVVDGRCT+T +ND NQ K+PKLAL+D SS HL +TS
Sbjct: 122 EFLSLKRSVVDGRCTATDNNKNNDANQSKIPKLALYDNSSSHLPITS 163
BLAST of Csor.00g057780 vs. ExPASy TrEMBL
Match:
A0A5D3CPD3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004880 PE=4 SV=1)
HSP 1 Score: 189 bits (481), Expect = 7.66e-59
Identity = 112/170 (65.88%), Postives = 130/170 (76.47%), Query Frame = 0
Query: 1 MACLDSYKSP-DQKGHYPPMSPRLSFSNDFVESHHSTN-TNTNTHISQHQ---NSPPNIS 60
MACLD+YK+ DQKG +PPMSPRLSFSNDFVES ++ + TNT +I + N+PP
Sbjct: 2 MACLDTYKNKSDQKGQFPPMSPRLSFSNDFVESSNNPSPTNTTNNIQDPKILSNTPP--- 61
Query: 61 ASDDFEFSALTNPSNHT-MTAADELFFKGKLLPTLRDELLLHDDDDAIVVPSFVPPKGLP 120
SDDFEFS NP+NHT MTAAD+LFFKGKLLPTLRDELL+ DD+D VP P GLP
Sbjct: 62 -SDDFEFSP--NPTNHTAMTAADQLFFKGKLLPTLRDELLIDDDEDIAPVP---PKSGLP 121
Query: 121 KWKEFLSLKRSVVDGRCTSTGADN--DNNQGKMPKLALHDKSS-HLDMTS 161
KWKEFLSLKRSVVDGRCT+T + D NQGK+PKLAL+D SS HL +TS
Sbjct: 122 KWKEFLSLKRSVVDGRCTATDNNKNIDANQGKIPKLALYDNSSSHLPITS 162
BLAST of Csor.00g057780 vs. ExPASy TrEMBL
Match:
A0A1S3B2N0 (uncharacterized protein LOC103485334 OS=Cucumis melo OX=3656 GN=LOC103485334 PE=4 SV=1)
HSP 1 Score: 187 bits (474), Expect = 8.60e-58
Identity = 111/170 (65.29%), Postives = 129/170 (75.88%), Query Frame = 0
Query: 1 MACLDSYKSP-DQKGHYPPMSPRLSFSNDFVESHHSTN-TNTNTHISQHQ---NSPPNIS 60
MACLD+YK+ DQKG +PPMSPRLSFSNDFVES ++ + TNT +I + N+PP
Sbjct: 1 MACLDTYKNKSDQKGQFPPMSPRLSFSNDFVESSNNPSPTNTTNNIQDPKILSNTPP--- 60
Query: 61 ASDDFEFSALTNPSNHT-MTAADELFFKGKLLPTLRDELLLHDDDDAIVVPSFVPPKGLP 120
SDDFEFS NP+NHT MTAAD+LFFKGKLLPTL DELL+ DD+D VP P GLP
Sbjct: 61 -SDDFEFSP--NPTNHTAMTAADQLFFKGKLLPTLGDELLIDDDEDIAPVP---PKSGLP 120
Query: 121 KWKEFLSLKRSVVDGRCTSTGADN--DNNQGKMPKLALHDKSS-HLDMTS 161
KWKEFLSLKRSVVDGRCT+T + D NQGK+PKLAL+D SS HL +TS
Sbjct: 121 KWKEFLSLKRSVVDGRCTATDNNKNIDANQGKIPKLALYDNSSSHLPITS 161
BLAST of Csor.00g057780 vs. TAIR 10
Match:
AT5G66800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 83.6 bits (205), Expect = 1.6e-16
Identity = 65/155 (41.94%), Postives = 84/155 (54.19%), Query Frame = 0
Query: 1 MACLDSYKSPDQKGHYPPMSPRLSFSNDFVESH-HSTNTNTNTHISQHQNSPPNISASDD 60
MACL+ Y S G PMSPR+SFSNDFVE +T T ++ +S+ + S + S SD+
Sbjct: 1 MACLEMYNS--NGGGGTPMSPRISFSNDFVEIRPETTKTTRSSPLSKQEGS--SSSFSDN 60
Query: 61 FEFSALTNPSNHTMTAADELFFKGKLLP---------TLRDELLLHDDD-----DAIVVP 120
FEFS SN+TM ADELF KGKLLP TLR+ELL+ +D+ DA +
Sbjct: 61 FEFSV----SNYTMMPADELFSKGKLLPFKETNQVQRTLREELLVEEDEEEGPRDATNIF 120
Query: 121 SFVPP----------KGLPKWKEFLSLKRSVVDGR 131
S PP +WK L LKR+ V +
Sbjct: 121 SLKPPIFSSSSSSSSSSKGRWKGLLGLKRAHVGSK 147
BLAST of Csor.00g057780 vs. TAIR 10
Match:
AT4G34419.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G19200.1). )
HSP 1 Score: 42.0 bits (97), Expect = 5.4e-04
Identity = 32/91 (35.16%), Postives = 45/91 (49.45%), Query Frame = 0
Query: 21 PRLSFSNDFVESHHSTNTNTNTHISQHQNSPPNISASDDFEFSALTNPSNHTMTAADELF 80
PR+SFS+ F + H + +++ +P +SDDFEF N +MT ADE+F
Sbjct: 18 PRISFSSGFAATKH--------EMIKYKEAP---VSSDDFEFGV----ENFSMTTADEIF 77
Query: 81 FKGKLLP------------TLRDELLLHDDD 100
F G +LP TLR+EL D D
Sbjct: 78 FDGMILPLKEEVNTTKRMSTLREELSEEDGD 93
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6604184.1 | 1.59e-115 | 100.00 | hypothetical protein SDJN03_04793, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_023544728.1 | 1.07e-111 | 97.53 | uncharacterized protein LOC111804229 [Cucurbita pepo subsp. pepo] | [more] |
XP_022950341.1 | 5.11e-110 | 96.30 | uncharacterized protein LOC111453452 [Cucurbita moschata] | [more] |
KAG7034345.1 | 2.05e-108 | 95.65 | hypothetical protein SDJN02_04072, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022977871.1 | 1.91e-103 | 93.29 | uncharacterized protein LOC111478032 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GEJ6 | 2.48e-110 | 96.30 | uncharacterized protein LOC111453452 OS=Cucurbita moschata OX=3662 GN=LOC1114534... | [more] |
A0A6J1IL61 | 9.25e-104 | 93.29 | uncharacterized protein LOC111478032 OS=Cucurbita maxima OX=3661 GN=LOC111478032... | [more] |
A0A0A0KIB7 | 3.38e-60 | 66.47 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490830 PE=4 SV=1 | [more] |
A0A5D3CPD3 | 7.66e-59 | 65.88 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3B2N0 | 8.60e-58 | 65.29 | uncharacterized protein LOC103485334 OS=Cucumis melo OX=3656 GN=LOC103485334 PE=... | [more] |
Match Name | E-value | Identity | Description | |
AT5G66800.1 | 1.6e-16 | 41.94 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT4G34419.1 | 5.4e-04 | 35.16 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |