Csor.00g056910 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g056910
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Ribonuclease T(2)
Location	Csor_Chr04: 8474425 .. 8475272 (+)
RNA-Seq Expression	Csor.00g056910
Synteny	Csor.00g056910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTTCTTCACCCGCTTCCTTCTCATAAATCTCGCCATTTTCCAATGCCTTTCCCTCCTCCTCTGTCTCGCCGCCAAGGACTTTGATTTCTTCTACTTCGTTCAAAGTGTAAGTATATTCAACTATAACAACCCTACCCATTACCCAAGTTTCAATTTTTAACCCCTTTCTTTCTATGTTTCCTGCAGTGGCCTGGCTCTTACTGCGACACTCGCCGAAGTTGCTGCTATCCCCAGGCTGGAAAACCCTCCCCTGACTTCAAAATCCACGGCCTTTGGCCCAATTACAACGATGGCACTTACCCCTCTAATTGTGACTCATCCAACACCTTCGATCCATCCCAGGTATTTAACATCCCATACCTACATTTCTCTGGTTCCATAATTGTTTTTGTCTCATTATATTGTGGAGATGTGATTTAGGTGTCAGATTTGGAGGACAGCATGCAGCGGGACTGGCCATCACTCGCTTGTCCAAGCAGCGACAGCACCAAATTCTGGGCGCATGAGTGGAACAAACACGGGACCTGCGCCGAATCCGTCGTAGACCAACATGCATATTTCGAGGCCGCTCTCAATCTTAAAACCCAAGCCGACATACTCAAAGCTCTTCAAACCGCAGGAATAAACCCAGATGGAAGTAGCTACAGTTTGAGTAAGATCAAGAGTGCCATTGAAGATGGAGTTAAGCTGAGCCCTGGAATCACCTGCAACACCGATGAGTCCGGCAATAGTCAATTGTATGAGGTTTACTTCTGCGTCGATTCTTCAGCCTCCAACTTCATCGACTGCCCTGTTTTCCCAGATGGAAACTGTAATTCTTCCGTGGAGTTCCCCGAATTTTAG

mRNA sequence

ATGTCTTTCTTCACCCGCTTCCTTCTCATAAATCTCGCCATTTTCCAATGCCTTTCCCTCCTCCTCTGTCTCGCCGCCAAGGACTTTGATTTCTTCTACTTCGTTCAAAGTTGGCCTGGCTCTTACTGCGACACTCGCCGAAGTTGCTGCTATCCCCAGGCTGGAAAACCCTCCCCTGACTTCAAAATCCACGGCCTTTGGCCCAATTACAACGATGGCACTTACCCCTCTAATTGTGACTCATCCAACACCTTCGATCCATCCCAGGTGTCAGATTTGGAGGACAGCATGCAGCGGGACTGGCCATCACTCGCTTGTCCAAGCAGCGACAGCACCAAATTCTGGGCGCATGAGTGGAACAAACACGGGACCTGCGCCGAATCCGTCGTAGACCAACATGCATATTTCGAGGCCGCTCTCAATCTTAAAACCCAAGCCGACATACTCAAAGCTCTTCAAACCGCAGGAATAAACCCAGATGGAAGTAGCTACAGTTTGAGTAAGATCAAGAGTGCCATTGAAGATGGAGTTAAGCTGAGCCCTGGAATCACCTGCAACACCGATGAGTCCGGCAATAGTCAATTGTATGAGGTTTACTTCTGCGTCGATTCTTCAGCCTCCAACTTCATCGACTGCCCTGTTTTCCCAGATGGAAACTGTAATTCTTCCGTGGAGTTCCCCGAATTTTAG

Coding sequence (CDS)

ATGTCTTTCTTCACCCGCTTCCTTCTCATAAATCTCGCCATTTTCCAATGCCTTTCCCTCCTCCTCTGTCTCGCCGCCAAGGACTTTGATTTCTTCTACTTCGTTCAAAGTTGGCCTGGCTCTTACTGCGACACTCGCCGAAGTTGCTGCTATCCCCAGGCTGGAAAACCCTCCCCTGACTTCAAAATCCACGGCCTTTGGCCCAATTACAACGATGGCACTTACCCCTCTAATTGTGACTCATCCAACACCTTCGATCCATCCCAGGTGTCAGATTTGGAGGACAGCATGCAGCGGGACTGGCCATCACTCGCTTGTCCAAGCAGCGACAGCACCAAATTCTGGGCGCATGAGTGGAACAAACACGGGACCTGCGCCGAATCCGTCGTAGACCAACATGCATATTTCGAGGCCGCTCTCAATCTTAAAACCCAAGCCGACATACTCAAAGCTCTTCAAACCGCAGGAATAAACCCAGATGGAAGTAGCTACAGTTTGAGTAAGATCAAGAGTGCCATTGAAGATGGAGTTAAGCTGAGCCCTGGAATCACCTGCAACACCGATGAGTCCGGCAATAGTCAATTGTATGAGGTTTACTTCTGCGTCGATTCTTCAGCCTCCAACTTCATCGACTGCCCTGTTTTCCCAGATGGAAACTGTAATTCTTCCGTGGAGTTCCCCGAATTTTAG

Protein sequence

MSFFTRFLLINLAIFQCLSLLLCLAAKDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPDFKIHGLWPNYNDGTYPSNCDSSNTFDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWNKHGTCAESVVDQHAYFEAALNLKTQADILKALQTAGINPDGSSYSLSKIKSAIEDGVKLSPGITCNTDESGNSQLYEVYFCVDSSASNFIDCPVFPDGNCNSSVEFPEF

Homology

[Close]

BLAST of Csor.00g056910 vs. ExPASy Swiss-Prot
Match: P80022 (Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2)

HSP 1 Score: 308.9 bits (790), Expect = 4.7e-83
Identity = 144/229 (62.88%), Postives = 178/229 (77.73%), Query Frame = 0


Query: 2   SFFTRFLLINLAIFQCLSLLLCLAAKDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPDF 61
           S F+ FL++ L I QCLS+L   AAKDFDFFYFVQ WPGSYCDT++SCCYP  GKP+ DF
Sbjct: 5   SAFSLFLIL-LIITQCLSVL--NAAKDFDFFYFVQQWPGSYCDTKQSCCYPTTGKPAADF 64

Query: 62  KIHGLWPNYNDGTYPSNCDSSNTFDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWNK 121
            IHGLWPN NDGTYPSNCD ++ +D SQ+SDL  SMQ++WP+LACPS   + FW+HEW K
Sbjct: 65  GIHGLWPNNNDGTYPSNCDPNSPYDQSQISDLISSMQQNWPTLACPSGSGSTFWSHEWEK 124

Query: 122 HGTCAESVV-DQHAYFEAALNLKTQADILKALQTAGINPDGSSYSLSKIKSAIEDGVKLS 181
           HGTCAESV+ +QHAYF+ AL+LK Q D+L  LQ A I+PDG SY L  I++AI+  +  +
Sbjct: 125 HGTCAESVLTNQHAYFKKALDLKNQIDLLSILQGADIHPDGESYDLVNIRNAIKSAIGYT 184

Query: 182 PGITCNTDESGNSQLYEVYFCVDSSASNFIDCPVFPDGNCNSSVEFPEF 230
           P I CN D+SGNSQLY+VY CVD S S+ I+CP+FP G C +S+EFP F
Sbjct: 185 PWIQCNVDQSGNSQLYQVYICVDGSGSSLIECPIFPGGKCGTSIEFPTF 230

[Close]

BLAST of Csor.00g056910 vs. ExPASy Swiss-Prot
Match: P42813 (Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 1.7e-80
Identity = 133/229 (58.08%), Postives = 167/229 (72.93%), Query Frame = 0


Query: 6   RFLLINLAIFQCLSLLLCL-----AAKDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPD 65
           + LL +L +   L +L  +     +++DFDFFYFVQ WPGSYCDT++ CCYP +GKP+ D
Sbjct: 2   KILLASLCLISLLVILPSVFSASSSSEDFDFFYFVQQWPGSYCDTQKKCCYPNSGKPAAD 61

Query: 66  FKIHGLWPNYNDGTYPSNCDSSNTFDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWN 125
           F IHGLWPNY DGTYPSNCD+S  FD S +SDL  SM++ WP+LACPS     FW HEW 
Sbjct: 62  FGIHGLWPNYKDGTYPSNCDASKPFDSSTISDLLTSMKKSWPTLACPSGSGEAFWEHEWE 121

Query: 126 KHGTCAESVVDQHAYFEAALNLKTQADILKALQTAGINPDGSSYSLSKIKSAIEDGVKLS 185
           KHGTC+ESV+DQH YF+ ALNLK + ++L AL  AGINPDG SYSL  I+ +I++ +  +
Sbjct: 122 KHGTCSESVIDQHEYFQTALNLKQKTNLLGALTKAGINPDGKSYSLESIRDSIKESIGFT 181

Query: 186 PGITCNTDESGNSQLYEVYFCVDSSASNFIDCPVFPDGNCNSSVEFPEF 230
           P + CN D SGNSQLY+VY CVD S S  I+CPVFP G C + +EFP F
Sbjct: 182 PWVECNRDGSGNSQLYQVYLCVDRSGSGLIECPVFPHGKCGAEIEFPSF 230

[Close]

BLAST of Csor.00g056910 vs. ExPASy Swiss-Prot
Match: P80196 (Intracellular ribonuclease LX OS=Solanum lycopersicum OX=4081 GN=RNALX PE=1 SV=2)

HSP 1 Score: 293.5 bits (750), Expect = 2.1e-78
Identity = 136/224 (60.71%), Postives = 166/224 (74.11%), Query Frame = 0


Query: 8   LLINLAIFQCLSLLLCLAAKDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPDFKIHGLW 67
           LLI + + QCL L+LC+ ++DFDFFYFVQ WP SYCDTRRSCCYP  GKP  DF IHGLW
Sbjct: 8   LLIKIIVVQCL-LVLCVTSQDFDFFYFVQQWPASYCDTRRSCCYPTTGKPDEDFSIHGLW 67

Query: 68  PNYNDGTYPSNCDSSNTFDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWNKHGTCAE 127
           PNY DG +P NCD  ++ D S+ SDL  +M+++WPSLACPSSD  KFW+HEW KHGTC  
Sbjct: 68  PNYKDGKWPQNCDRESSLDESEFSDLISTMEKNWPSLACPSSDGLKFWSHEWLKHGTC-- 127

Query: 128 SVVDQHAYFEAALNLKTQADILKALQTAGINP-DGSSYSLSKIKSAIEDGVKLSPGITCN 187
           S ++QHAYF+ AL+ KT++++L+ L  AGI P +G  Y +  IK AIE GV  +P I CN
Sbjct: 128 SALNQHAYFQTALDFKTKSNLLQNLNNAGIKPRNGDYYGVESIKKAIEKGVGHTPFIECN 187

Query: 188 TDESGNSQLYEVYFCVDSSASNFIDCPVFP-DGNCNSSVEFPEF 230
            D  GN QLY+VY CVDSSAS FIDCP+FP  G C S +EFP F
Sbjct: 188 VDSQGNHQLYQVYLCVDSSASKFIDCPIFPHGGKCGSKIEFPSF 228

[Close]

BLAST of Csor.00g056910 vs. ExPASy Swiss-Prot
Match: P42815 (Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 8.1e-75
Identity = 128/224 (57.14%), Postives = 161/224 (71.88%), Query Frame = 0


Query: 6   RFLLINLAIFQCLSLLLCLAAKDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPDFKIHG 65
           +F +  LA+ Q   L +   A+DFDFFYFV  WPG+YCD+R SCCYPQ GKP+ DF IHG
Sbjct: 2   KFFIFILALQQ---LYVQSFAQDFDFFYFVLQWPGAYCDSRHSCCYPQTGKPAADFGIHG 61

Query: 66  LWPNYNDGTYPSNCDSSNTFDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWNKHGTC 125
           LWPNY  G +P NC+  + FD  +VSDL   +QR+WP+L+CPS+D  KFW HEW KHGTC
Sbjct: 62  LWPNYKTGGWPQNCNPDSRFDDLRVSDLMSDLQREWPTLSCPSNDGMKFWTHEWEKHGTC 121

Query: 126 AESVVDQHAYFEAALNLKTQADILKALQTAGINPDGSSYSLSKIKSAIEDGVKLSPGITC 185
           AES +DQH YFEA L LK +A++L AL  AGI PD   Y +  I++ I+  V  +PGI C
Sbjct: 122 AESELDQHDYFEAGLKLKQKANLLHALTNAGIKPDDKFYEMKDIENTIKQVVGFAPGIEC 181

Query: 186 NTDESGNSQLYEVYFCVDSSASNFIDCPVFPDGNCNSSVEFPEF 230
           N D S NSQLY++Y CVD+SAS FI+CPV P G C+S V+FP+F
Sbjct: 182 NKDSSHNSQLYQIYLCVDTSASKFINCPVMPHGRCDSRVQFPKF 222

[Close]

BLAST of Csor.00g056910 vs. ExPASy Swiss-Prot
Match: Q7M438 (Ribonuclease DdI OS=Dictyostelium discoideum OX=44689 GN=ddiA PE=1 SV=3)

HSP 1 Score: 146.4 bits (368), Expect = 4.1e-34
Identity = 82/203 (40.39%), Postives = 118/203 (58.13%), Query Frame = 0


Query: 28  DFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPDFKIHGLWPNYNDGTYPSNCDSSNTFDP 87
           DFDF+ FVQ W  SYCD+ ++C      K    F IHGLWP  +DG+YPS C S  +F+ 
Sbjct: 31  DFDFYLFVQQWIYSYCDS-QTCI---QNKEREAFTIHGLWPENSDGSYPSFC-SGPSFNV 90

Query: 88  SQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWNKHGTCAES--VVDQHAYFEAALNLKTQ 147
           + + DLED +  DWPSL  P++D   FW HE++KHGTC+ +  + D H YF   + L T+
Sbjct: 91  NAIQDLEDQLNFDWPSLTGPNTD---FWTHEFSKHGTCSITGPITDIHDYFATGIKLYTE 150

Query: 148 ADILKALQTAGINP-DGSSYSLSKIKSAIEDGVKLSPGITCNTDESGNSQLYEVYFCVDS 207
            +I  AL++  I P D ++Y    I +AI       PGI C+     + QL  V  C+D 
Sbjct: 151 FNITAALESENIYPSDSNTYKPVDITNAITTHFGGKPGIQCS-----SGQLSTVAVCIDK 210

Query: 208 SASNFIDCPVFPDGNCNSSVEFP 228
           ++ + +DCP     +C+ SV+FP
Sbjct: 211 NSLSIMDCPDLQGWSCSGSVKFP 220

[Close]

BLAST of Csor.00g056910 vs. NCBI nr
Match: KAG6601433.1 (hypothetical protein SDJN03_06666, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 480 bits (1235), Expect = 3.27e-171
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MSFFTRFLLINLAIFQCLSLLLCLAAKDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPD 60
           MSFFTRFLLINLAIFQCLSLLLCLAAKDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPD
Sbjct: 1   MSFFTRFLLINLAIFQCLSLLLCLAAKDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPD 60

Query: 61  FKIHGLWPNYNDGTYPSNCDSSNTFDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWN 120
           FKIHGLWPNYNDGTYPSNCDSSNTFDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWN
Sbjct: 61  FKIHGLWPNYNDGTYPSNCDSSNTFDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWN 120

Query: 121 KHGTCAESVVDQHAYFEAALNLKTQADILKALQTAGINPDGSSYSLSKIKSAIEDGVKLS 180
           KHGTCAESVVDQHAYFEAALNLKTQADILKALQTAGINPDGSSYSLSKIKSAIEDGVKLS
Sbjct: 121 KHGTCAESVVDQHAYFEAALNLKTQADILKALQTAGINPDGSSYSLSKIKSAIEDGVKLS 180

Query: 181 PGITCNTDESGNSQLYEVYFCVDSSASNFIDCPVFPDGNCNSSVEFPEF 229
           PGITCNTDESGNSQLYEVYFCVDSSASNFIDCPVFPDGNCNSSVEFPEF
Sbjct: 181 PGITCNTDESGNSQLYEVYFCVDSSASNFIDCPVFPDGNCNSSVEFPEF 229

[Close]

BLAST of Csor.00g056910 vs. NCBI nr
Match: XP_022957134.1 (extracellular ribonuclease LE-like [Cucurbita moschata])

HSP 1 Score: 474 bits (1220), Expect = 6.12e-169
Identity = 228/229 (99.56%), Postives = 228/229 (99.56%), Query Frame = 0


Query: 1   MSFFTRFLLINLAIFQCLSLLLCLAAKDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPD 60
           MSFFTRFLLINLAIFQCLSLL CLAAKDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPD
Sbjct: 1   MSFFTRFLLINLAIFQCLSLL-CLAAKDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPD 60

Query: 61  FKIHGLWPNYNDGTYPSNCDSSNTFDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWN 120
           FKIHGLWPNYNDGTYPSNCDSSNTFDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWN
Sbjct: 61  FKIHGLWPNYNDGTYPSNCDSSNTFDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWN 120

Query: 121 KHGTCAESVVDQHAYFEAALNLKTQADILKALQTAGINPDGSSYSLSKIKSAIEDGVKLS 180
           KHGTCAESVVDQHAYFEAALNLKTQADILKALQTAGINPDGSSYSLSKIKSAIEDGVKLS
Sbjct: 121 KHGTCAESVVDQHAYFEAALNLKTQADILKALQTAGINPDGSSYSLSKIKSAIEDGVKLS 180

Query: 181 PGITCNTDESGNSQLYEVYFCVDSSASNFIDCPVFPDGNCNSSVEFPEF 229
           PGITCNTDESGNSQLYEVYFCVDSSASNFIDCPVFPDGNCNSSVEFPEF
Sbjct: 181 PGITCNTDESGNSQLYEVYFCVDSSASNFIDCPVFPDGNCNSSVEFPEF 228

[Close]

BLAST of Csor.00g056910 vs. NCBI nr
Match: XP_022985198.1 (extracellular ribonuclease LE-like [Cucurbita maxima])

HSP 1 Score: 466 bits (1200), Expect = 6.86e-166
Identity = 224/229 (97.82%), Postives = 226/229 (98.69%), Query Frame = 0


Query: 1   MSFFTRFLLINLAIFQCLSLLLCLAAKDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPD 60
           MSFFTRFLLINLAIFQCLSLL CLAA+DFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPD
Sbjct: 1   MSFFTRFLLINLAIFQCLSLL-CLAARDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPD 60

Query: 61  FKIHGLWPNYNDGTYPSNCDSSNTFDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWN 120
           FKIHGLWPNYND TYPSNCDSSN FDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWN
Sbjct: 61  FKIHGLWPNYNDATYPSNCDSSNLFDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWN 120

Query: 121 KHGTCAESVVDQHAYFEAALNLKTQADILKALQTAGINPDGSSYSLSKIKSAIEDGVKLS 180
           KHGTCAESVVDQHAYFEAALNLKTQADILKALQTAGINPDGSSYSLSKIKSAIEDGVKLS
Sbjct: 121 KHGTCAESVVDQHAYFEAALNLKTQADILKALQTAGINPDGSSYSLSKIKSAIEDGVKLS 180

Query: 181 PGITCNTDESGNSQLYEVYFCVDSSASNFIDCPVFPDGNCNSSVEFPEF 229
           PGITCNTDESGNSQLYEVYFCVDSSASNFIDCPVFPDGNC+SSVEFPEF
Sbjct: 181 PGITCNTDESGNSQLYEVYFCVDSSASNFIDCPVFPDGNCDSSVEFPEF 228

[Close]

BLAST of Csor.00g056910 vs. NCBI nr
Match: XP_023551516.1 (extracellular ribonuclease LE-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 465 bits (1197), Expect = 1.97e-165
Identity = 223/229 (97.38%), Postives = 226/229 (98.69%), Query Frame = 0


Query: 1   MSFFTRFLLINLAIFQCLSLLLCLAAKDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPD 60
           MSFFTRFLLINLAIFQCLSLL CLAAKDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPD
Sbjct: 1   MSFFTRFLLINLAIFQCLSLL-CLAAKDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPD 60

Query: 61  FKIHGLWPNYNDGTYPSNCDSSNTFDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWN 120
           FKIHGLWPNYNDGTYPSNCDSSN FDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWN
Sbjct: 61  FKIHGLWPNYNDGTYPSNCDSSNLFDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWN 120

Query: 121 KHGTCAESVVDQHAYFEAALNLKTQADILKALQTAGINPDGSSYSLSKIKSAIEDGVKLS 180
           KHGTCAESVVDQHAYF+AALNLKTQADILKALQTAGINPDG SYSLSKIKSAIEDGVKLS
Sbjct: 121 KHGTCAESVVDQHAYFKAALNLKTQADILKALQTAGINPDGGSYSLSKIKSAIEDGVKLS 180

Query: 181 PGITCNTDESGNSQLYEVYFCVDSSASNFIDCPVFPDGNCNSSVEFPEF 229
           PGITCNTDESGNSQLYEVYFCVDSSASNFIDCPVFP+GNC+SSVEFPEF
Sbjct: 181 PGITCNTDESGNSQLYEVYFCVDSSASNFIDCPVFPEGNCDSSVEFPEF 228

[Close]

BLAST of Csor.00g056910 vs. NCBI nr
Match: KAG7032217.1 (Ribonuclease 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 467 bits (1201), Expect = 7.77e-163
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MSFFTRFLLINLAIFQCLSLLLCLAAKDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPD 60
           MSFFTRFLLINLAIFQCLSLLLCLAAKDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPD
Sbjct: 1   MSFFTRFLLINLAIFQCLSLLLCLAAKDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPD 60

Query: 61  FKIHGLWPNYNDGTYPSNCDSSNTFDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWN 120
           FKIHGLWPNYNDGTYPSNCDSSNTFDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWN
Sbjct: 61  FKIHGLWPNYNDGTYPSNCDSSNTFDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWN 120

Query: 121 KHGTCAESVVDQHAYFEAALNLKTQADILKALQTAGINPDGSSYSLSKIKSAIEDGVKLS 180
           KHGTCAESVVDQHAYFEAALNLKTQADILKALQTAGINPDGSSYSLSKIKSAIEDGVKLS
Sbjct: 121 KHGTCAESVVDQHAYFEAALNLKTQADILKALQTAGINPDGSSYSLSKIKSAIEDGVKLS 180

Query: 181 PGITCNTDESGNSQLYEVYFCVDSSASNFIDCPVFPDGNCNSS 223
           PGITCNTDESGNSQLYEVYFCVDSSASNFIDCPVFPDGNCNSS
Sbjct: 181 PGITCNTDESGNSQLYEVYFCVDSSASNFIDCPVFPDGNCNSS 223

[Close]

BLAST of Csor.00g056910 vs. ExPASy TrEMBL
Match: A0A6J1H135 (Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111458606 PE=3 SV=1)

HSP 1 Score: 474 bits (1220), Expect = 2.96e-169
Identity = 228/229 (99.56%), Postives = 228/229 (99.56%), Query Frame = 0


Query: 1   MSFFTRFLLINLAIFQCLSLLLCLAAKDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPD 60
           MSFFTRFLLINLAIFQCLSLL CLAAKDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPD
Sbjct: 1   MSFFTRFLLINLAIFQCLSLL-CLAAKDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPD 60

Query: 61  FKIHGLWPNYNDGTYPSNCDSSNTFDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWN 120
           FKIHGLWPNYNDGTYPSNCDSSNTFDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWN
Sbjct: 61  FKIHGLWPNYNDGTYPSNCDSSNTFDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWN 120

Query: 121 KHGTCAESVVDQHAYFEAALNLKTQADILKALQTAGINPDGSSYSLSKIKSAIEDGVKLS 180
           KHGTCAESVVDQHAYFEAALNLKTQADILKALQTAGINPDGSSYSLSKIKSAIEDGVKLS
Sbjct: 121 KHGTCAESVVDQHAYFEAALNLKTQADILKALQTAGINPDGSSYSLSKIKSAIEDGVKLS 180

Query: 181 PGITCNTDESGNSQLYEVYFCVDSSASNFIDCPVFPDGNCNSSVEFPEF 229
           PGITCNTDESGNSQLYEVYFCVDSSASNFIDCPVFPDGNCNSSVEFPEF
Sbjct: 181 PGITCNTDESGNSQLYEVYFCVDSSASNFIDCPVFPDGNCNSSVEFPEF 228

[Close]

BLAST of Csor.00g056910 vs. ExPASy TrEMBL
Match: A0A6J1JCW7 (Ribonuclease T(2) OS=Cucurbita maxima OX=3661 GN=LOC111483272 PE=3 SV=1)

HSP 1 Score: 466 bits (1200), Expect = 3.32e-166
Identity = 224/229 (97.82%), Postives = 226/229 (98.69%), Query Frame = 0


Query: 1   MSFFTRFLLINLAIFQCLSLLLCLAAKDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPD 60
           MSFFTRFLLINLAIFQCLSLL CLAA+DFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPD
Sbjct: 1   MSFFTRFLLINLAIFQCLSLL-CLAARDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPD 60

Query: 61  FKIHGLWPNYNDGTYPSNCDSSNTFDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWN 120
           FKIHGLWPNYND TYPSNCDSSN FDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWN
Sbjct: 61  FKIHGLWPNYNDATYPSNCDSSNLFDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWN 120

Query: 121 KHGTCAESVVDQHAYFEAALNLKTQADILKALQTAGINPDGSSYSLSKIKSAIEDGVKLS 180
           KHGTCAESVVDQHAYFEAALNLKTQADILKALQTAGINPDGSSYSLSKIKSAIEDGVKLS
Sbjct: 121 KHGTCAESVVDQHAYFEAALNLKTQADILKALQTAGINPDGSSYSLSKIKSAIEDGVKLS 180

Query: 181 PGITCNTDESGNSQLYEVYFCVDSSASNFIDCPVFPDGNCNSSVEFPEF 229
           PGITCNTDESGNSQLYEVYFCVDSSASNFIDCPVFPDGNC+SSVEFPEF
Sbjct: 181 PGITCNTDESGNSQLYEVYFCVDSSASNFIDCPVFPDGNCDSSVEFPEF 228

[Close]

BLAST of Csor.00g056910 vs. ExPASy TrEMBL
Match: A0A6J1G181 (Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111449750 PE=3 SV=1)

HSP 1 Score: 390 bits (1001), Expect = 6.93e-136
Identity = 185/229 (80.79%), Postives = 204/229 (89.08%), Query Frame = 0


Query: 1   MSFFTRFLLINLAIFQCLSLLLCLAAKDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPD 60
           MS FTRF+LINL IFQCLSLL CLA +DFDFFYFVQSWPGSYCDT RSCCYP+AGKPS D
Sbjct: 1   MSSFTRFVLINLVIFQCLSLL-CLA-QDFDFFYFVQSWPGSYCDTGRSCCYPRAGKPSAD 60

Query: 61  FKIHGLWPNYNDGTYPSNCDSSNTFDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWN 120
           FKIHGLWPNYNDGTYPSNCDSSN FD +Q+SDL  SMQR+WPSLACPSSDSTKFWAHEW+
Sbjct: 61  FKIHGLWPNYNDGTYPSNCDSSNPFDRTQISDLVSSMQRNWPSLACPSSDSTKFWAHEWD 120

Query: 121 KHGTCAESVVDQHAYFEAALNLKTQADILKALQTAGINPDGSSYSLSKIKSAIEDGVKLS 180
           KHGTCAESV+DQH YFE +L LK+QA+IL+AL+TAGINPDGS YSL KIKSAIE+GV   
Sbjct: 121 KHGTCAESVLDQHGYFETSLKLKSQANILQALETAGINPDGSYYSLDKIKSAIEEGVGYR 180

Query: 181 PGITCNTDESGNSQLYEVYFCVDSSASNFIDCPVFPDGNCNSSVEFPEF 229
           PGITCN D+SGN QLYEVY CVDSSAS FI+CP+FP G C S+VEFP+F
Sbjct: 181 PGITCNVDDSGNRQLYEVYLCVDSSASGFINCPIFPSGQCGSTVEFPKF 227

[Close]

BLAST of Csor.00g056910 vs. ExPASy TrEMBL
Match: A0A6J1HX05 (Ribonuclease T(2) OS=Cucurbita maxima OX=3661 GN=LOC111467429 PE=3 SV=1)

HSP 1 Score: 384 bits (987), Expect = 9.42e-134
Identity = 184/229 (80.35%), Postives = 201/229 (87.77%), Query Frame = 0


Query: 1   MSFFTRFLLINLAIFQCLSLLLCLAAKDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPD 60
           MS  TRF+LI L IFQCLSLL CLA +DFDFFYFVQSWPGSYCDT RSCCYP+AGKPS D
Sbjct: 1   MSSCTRFVLITLVIFQCLSLL-CLA-QDFDFFYFVQSWPGSYCDTGRSCCYPRAGKPSAD 60

Query: 61  FKIHGLWPNYNDGTYPSNCDSSNTFDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWN 120
           FKIHGLWPNYND TYPSNCDSSN FD +Q+SDL  SMQR+WPSLACP SDSTKFWAHEWN
Sbjct: 61  FKIHGLWPNYNDATYPSNCDSSNPFDLTQISDLVSSMQRNWPSLACPGSDSTKFWAHEWN 120

Query: 121 KHGTCAESVVDQHAYFEAALNLKTQADILKALQTAGINPDGSSYSLSKIKSAIEDGVKLS 180
           KHGTCAESV++QH YFE +LNLK+QA+IL+AL+TAGINPDGS YSL KIKSAIE GV  S
Sbjct: 121 KHGTCAESVLNQHGYFETSLNLKSQANILQALETAGINPDGSYYSLDKIKSAIEGGVGYS 180

Query: 181 PGITCNTDESGNSQLYEVYFCVDSSASNFIDCPVFPDGNCNSSVEFPEF 229
           PGITCN D+SGN QLYEVY CVDSSAS FI+CP+FP G C SSVEFP+F
Sbjct: 181 PGITCNVDDSGNRQLYEVYLCVDSSASGFINCPIFPSGQCGSSVEFPKF 227

[Close]

BLAST of Csor.00g056910 vs. ExPASy TrEMBL
Match: A0A0A0KQM0 (Ribonuclease T(2) OS=Cucumis sativus OX=3659 GN=Csa_5G605140 PE=3 SV=1)

HSP 1 Score: 384 bits (986), Expect = 2.13e-133
Identity = 181/229 (79.04%), Postives = 205/229 (89.52%), Query Frame = 0


Query: 3   FFT-RFLLINL-AIFQCLSLLLCLAAKDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPD 62
           FFT RF+LIN+  IFQC SLL    A+DFDFFYFVQSWPGSYCDT RSCCYP+ GKPS D
Sbjct: 14  FFTSRFVLINIIVIFQCFSLLS--FAQDFDFFYFVQSWPGSYCDTGRSCCYPKTGKPSGD 73

Query: 63  FKIHGLWPNYNDGTYPSNCDSSNTFDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWN 122
           FKIHGLWPNYNDGTYPSNCDSSN FD +Q+SDL  SM+++WPSLACPSSD+TKFW+HEWN
Sbjct: 74  FKIHGLWPNYNDGTYPSNCDSSNPFDRTQISDLVSSMEKNWPSLACPSSDNTKFWSHEWN 133

Query: 123 KHGTCAESVVDQHAYFEAALNLKTQADILKALQTAGINPDGSSYSLSKIKSAIEDGVKLS 182
           KHGTC+ESV+DQH+YFE  LNLK QA+IL+ALQTAGINPDGS YSL KIKSAIE+G+KLS
Sbjct: 134 KHGTCSESVLDQHSYFETTLNLKQQANILQALQTAGINPDGSYYSLDKIKSAIEEGIKLS 193

Query: 183 PGITCNTDESGNSQLYEVYFCVDSSASNFIDCPVFPDGNCNSSVEFPEF 229
           PGI+CN DESGNSQLYE+Y CVDSSASNFIDCP+FP+ NC SS+EFP+F
Sbjct: 194 PGISCNVDESGNSQLYEIYLCVDSSASNFIDCPIFPNSNCASSLEFPKF 240

[Close]

BLAST of Csor.00g056910 vs. TAIR 10
Match: AT2G02990.1 (ribonuclease 1 )

HSP 1 Score: 300.4 bits (768), Expect = 1.2e-81
Identity = 133/229 (58.08%), Postives = 167/229 (72.93%), Query Frame = 0


Query: 6   RFLLINLAIFQCLSLLLCL-----AAKDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPD 65
           + LL +L +   L +L  +     +++DFDFFYFVQ WPGSYCDT++ CCYP +GKP+ D
Sbjct: 2   KILLASLCLISLLVILPSVFSASSSSEDFDFFYFVQQWPGSYCDTQKKCCYPNSGKPAAD 61

Query: 66  FKIHGLWPNYNDGTYPSNCDSSNTFDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWN 125
           F IHGLWPNY DGTYPSNCD+S  FD S +SDL  SM++ WP+LACPS     FW HEW 
Sbjct: 62  FGIHGLWPNYKDGTYPSNCDASKPFDSSTISDLLTSMKKSWPTLACPSGSGEAFWEHEWE 121

Query: 126 KHGTCAESVVDQHAYFEAALNLKTQADILKALQTAGINPDGSSYSLSKIKSAIEDGVKLS 185
           KHGTC+ESV+DQH YF+ ALNLK + ++L AL  AGINPDG SYSL  I+ +I++ +  +
Sbjct: 122 KHGTCSESVIDQHEYFQTALNLKQKTNLLGALTKAGINPDGKSYSLESIRDSIKESIGFT 181

Query: 186 PGITCNTDESGNSQLYEVYFCVDSSASNFIDCPVFPDGNCNSSVEFPEF 230
           P + CN D SGNSQLY+VY CVD S S  I+CPVFP G C + +EFP F
Sbjct: 182 PWVECNRDGSGNSQLYQVYLCVDRSGSGLIECPVFPHGKCGAEIEFPSF 230

[Close]

BLAST of Csor.00g056910 vs. TAIR 10
Match: AT1G14220.1 (Ribonuclease T2 family protein )

HSP 1 Score: 285.8 bits (730), Expect = 3.1e-77
Identity = 123/222 (55.41%), Postives = 168/222 (75.68%), Query Frame = 0


Query: 8   LLINLAIFQCLSLLLCLAAKDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPDFKIHGLW 67
           +L+ L +FQ   L +    +DFDFFYFV  WPG+YCDT R+CCYP +GKP+ DF IHGLW
Sbjct: 9   VLLKLLVFQ--GLFVSRPQEDFDFFYFVLQWPGAYCDTSRACCYPTSGKPAADFGIHGLW 68

Query: 68  PNYNDGTYPSNCDSSNTFDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWNKHGTCAE 127
           PNYN G++PSNCD  + FD SQ+SDL  S++++WP+L+CPS++   FW HEW KHGTC+E
Sbjct: 69  PNYNGGSWPSNCDPDSQFDRSQISDLVSSLKKNWPTLSCPSNEGFNFWEHEWEKHGTCSE 128

Query: 128 SVVDQHAYFEAALNLKTQADILKALQTAGINPDGSSYSLSKIKSAIEDGVKLSPGITCNT 187
           SV+DQH YFE AL LK +A++L+ L+ +GINPD   Y+L KI +AI+DG+  +PGI CN 
Sbjct: 129 SVMDQHEYFENALKLKQKANLLQILKNSGINPDDGFYNLDKITNAIKDGIGFTPGIECNK 188

Query: 188 DESGNSQLYEVYFCVDSSASNFIDCPVFPDGNCNSSVEFPEF 230
           D   N+QL+++Y CVD+S + FI+CPV P G+C S ++F +F
Sbjct: 189 DPERNAQLHQIYICVDTSGTEFIECPVLPRGSCPSQIQFSKF 228

[Close]

BLAST of Csor.00g056910 vs. TAIR 10
Match: AT1G26820.1 (ribonuclease 3 )

HSP 1 Score: 281.6 bits (719), Expect = 5.8e-76
Identity = 128/224 (57.14%), Postives = 161/224 (71.88%), Query Frame = 0


Query: 6   RFLLINLAIFQCLSLLLCLAAKDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPDFKIHG 65
           +F +  LA+ Q   L +   A+DFDFFYFV  WPG+YCD+R SCCYPQ GKP+ DF IHG
Sbjct: 2   KFFIFILALQQ---LYVQSFAQDFDFFYFVLQWPGAYCDSRHSCCYPQTGKPAADFGIHG 61

Query: 66  LWPNYNDGTYPSNCDSSNTFDPSQVSDLEDSMQRDWPSLACPSSDSTKFWAHEWNKHGTC 125
           LWPNY  G +P NC+  + FD  +VSDL   +QR+WP+L+CPS+D  KFW HEW KHGTC
Sbjct: 62  LWPNYKTGGWPQNCNPDSRFDDLRVSDLMSDLQREWPTLSCPSNDGMKFWTHEWEKHGTC 121

Query: 126 AESVVDQHAYFEAALNLKTQADILKALQTAGINPDGSSYSLSKIKSAIEDGVKLSPGITC 185
           AES +DQH YFEA L LK +A++L AL  AGI PD   Y +  I++ I+  V  +PGI C
Sbjct: 122 AESELDQHDYFEAGLKLKQKANLLHALTNAGIKPDDKFYEMKDIENTIKQVVGFAPGIEC 181

Query: 186 NTDESGNSQLYEVYFCVDSSASNFIDCPVFPDGNCNSSVEFPEF 230
           N D S NSQLY++Y CVD+SAS FI+CPV P G C+S V+FP+F
Sbjct: 182 NKDSSHNSQLYQIYLCVDTSASKFINCPVMPHGRCDSRVQFPKF 222

[Close]

BLAST of Csor.00g056910 vs. TAIR 10
Match: AT1G14210.1 (Ribonuclease T2 family protein )

HSP 1 Score: 223.8 bits (569), Expect = 1.4e-58
Identity = 100/223 (44.84%), Postives = 145/223 (65.02%), Query Frame = 0


Query: 8   LLINLAIFQCLSLLLCLAAKDFDFFYFVQSWPGSYCDTRRSCCYPQAGKPSPDFKIHGLW 67
           ++++L I Q L +       DF+FFY+V  WPG+ CD+++ CC P  G  + DF IHGLW
Sbjct: 5   IIVSLLILQSLVVSSSQTEPDFNFFYWVNYWPGAICDSQKGCCPPTKGNTASDFIIHGLW 64

Query: 68  PNYNDGTYPSNCDSSNTFDPSQVSDLEDSMQR---DWPSLACPSSDSTKFWAHEWNKHGT 127
           P +N+GT+P+ CD +N FD S++SDL   M++   +W   ACPS++ T  W HEWNKHGT
Sbjct: 65  PQFNNGTWPAFCDQTNLFDISKISDLVCQMEKKWTEWGVWACPSNE-TNLWEHEWNKHGT 124

Query: 128 CAESVVDQHAYFEAALNLKTQADILKALQTAGINPDGSSYSLSKIKSAIEDGVKLSPGIT 187
           C +S+ DQH+YF   L  K +  +L  L   GI P+   YSL +IK+AI+  +  +PGI 
Sbjct: 125 CVQSIFDQHSYFRTNLKFKHKVHLLNILIQKGIKPNDGFYSLDEIKNAIKCAIGFAPGIE 184

Query: 188 CNTDESGNSQLYEVYFCVDSSASNFIDCPVFPDGNCNSSVEFP 228
           CN D  GN QL+++Y C+D+ A  F++CP  PD +C S ++FP
Sbjct: 185 CNEDVKGNKQLFQIYICLDNYAKEFVECPYVPDKSCASKIKFP 226

[Close]

BLAST of Csor.00g056910 vs. TAIR 10
Match: AT2G39780.1 (ribonuclease 2 )

HSP 1 Score: 129.8 bits (325), Expect = 2.8e-30
Identity = 68/173 (39.31%), Postives = 97/173 (56.07%), Query Frame = 0


Query: 27  KDFDFFYFVQSWPGSYCDTRRSCCYPQA---GKPSP-DFKIHGLWPNYNDGTYPSNCDSS 86
           ++FD+F     WPG+YC   R CC   A   G  +P  F IHGLWP+YNDG++PS C  S
Sbjct: 30  REFDYFALSLQWPGTYCRGTRHCCSKNACCRGSDAPTQFTIHGLWPDYNDGSWPSCCYRS 89

Query: 87  NTFDPSQVSDLEDSMQRDWPSLACPSSDST-----KFWAHEWNKHGTCAESVV-DQHAYF 146
           + F   ++S L D +++ WPSL+C S  S       FW HEW KHGTC+  V  D++ YF
Sbjct: 90  D-FKEKEISTLMDGLEKYWPSLSCGSPSSCNGGKGSFWGHEWEKHGTCSSPVFHDEYNYF 149

Query: 147 EAALNLKTQADILKALQTAG-INPDGSSYSLSKIKSAIEDGVKLSPGITCNTD 189
              LNL  + ++   L  AG +  +   Y L  I +AI++   ++P + C  D
Sbjct: 150 LTTLNLYLKHNVTDVLYQAGYVASNSEKYPLGGIVTAIQNAFHITPEVVCKRD 201

The following BLAST results are available for this feature:

BLAST of Csor.00g056910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P80022	4.7e-83	62.88	Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2	[more]
P42813	1.7e-80	58.08	Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1	[more]
P80196	2.1e-78	60.71	Intracellular ribonuclease LX OS=Solanum lycopersicum OX=4081 GN=RNALX PE=1 SV=2	[more]
P42815	8.1e-75	57.14	Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1	[more]
Q7M438	4.1e-34	40.39	Ribonuclease DdI OS=Dictyostelium discoideum OX=44689 GN=ddiA PE=1 SV=3	[more]

BLAST of Csor.00g056910 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6601433.1	3.27e-171	100.00	hypothetical protein SDJN03_06666, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022957134.1	6.12e-169	99.56	extracellular ribonuclease LE-like [Cucurbita moschata]	[more]
XP_022985198.1	6.86e-166	97.82	extracellular ribonuclease LE-like [Cucurbita maxima]	[more]
XP_023551516.1	1.97e-165	97.38	extracellular ribonuclease LE-like [Cucurbita pepo subsp. pepo]	[more]
KAG7032217.1	7.77e-163	100.00	Ribonuclease 3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Csor.00g056910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H135	2.96e-169	99.56	Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111458606 PE=3 SV=1	[more]
A0A6J1JCW7	3.32e-166	97.82	Ribonuclease T(2) OS=Cucurbita maxima OX=3661 GN=LOC111483272 PE=3 SV=1	[more]
A0A6J1G181	6.93e-136	80.79	Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111449750 PE=3 SV=1	[more]
A0A6J1HX05	9.42e-134	80.35	Ribonuclease T(2) OS=Cucurbita maxima OX=3661 GN=LOC111467429 PE=3 SV=1	[more]
A0A0A0KQM0	2.13e-133	79.04	Ribonuclease T(2) OS=Cucumis sativus OX=3659 GN=Csa_5G605140 PE=3 SV=1	[more]

BLAST of Csor.00g056910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02990.1	1.2e-81	58.08	ribonuclease 1	[more]
AT1G14220.1	3.1e-77	55.41	Ribonuclease T2 family protein	[more]
AT1G26820.1	5.8e-76	57.14	ribonuclease 3	[more]
AT1G14210.1	1.4e-58	44.84	Ribonuclease T2 family protein	[more]
AT2G39780.1	2.8e-30	39.31	ribonuclease 2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001568	Ribonuclease T2-like	PFAM	PF00445	Ribonuclease_T2	coord: 29..212 e-value: 1.8E-58 score: 197.8
IPR001568	Ribonuclease T2-like	PANTHER	PTHR11240	RIBONUCLEASE T2	coord: 6..229
IPR036430	Ribonuclease T2-like superfamily	GENE3D	3.90.730.10		coord: 23..229 e-value: 1.2E-79 score: 269.2
IPR036430	Ribonuclease T2-like superfamily	SUPERFAMILY	55895	Ribonuclease Rh-like	coord: 23..228
None	No IPR available	PANTHER	PTHR11240:SF64	RIBONUCLEASE 3-RELATED	coord: 6..229
IPR033130	Ribonuclease T2, His active site 2	PROSITE	PS00531	RNASE_T2_2	coord: 114..125
IPR018188	Ribonuclease T2, His active site 1	PROSITE	PS00530	RNASE_T2_1	coord: 61..68
IPR033697	Ribonuclease T2, eukaryotic	CDD	cd01061	RNase_T2_euk	coord: 29..223 e-value: 4.03405E-82 score: 241.468

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g056910.m01	Csor.00g056910.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006401	RNA catabolic process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0033897	ribonuclease T2 activity
molecular_function	GO:0003723	RNA binding