Csor.00g056130 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g056130
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	axial regulator YABBY 4
Location	Csor_Chr04: 8856178 .. 8860781 (-)
RNA-Seq Expression	Csor.00g056130
Synteny	Csor.00g056130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCATCTCTTTGAACTTCCTGAAAAGATTTGCTATGTGCAATGTGGAATCTGCACCACCATTTTGCTGGTATGTTGGTGTTCTTCATTGTTCTTGAGCTTCAATTCATGTGAATGATTTGTTCATGTGGAAAATGCAGGTCAGCGTGCCGTGCAGCAGCTTGTCGATGGAGGTGACGGTGACGTGCGGCCACTGCTCAAGCCTCCTTTCTGTTAACATGCTGAGAGCCACTCTGGTTCCTCTTCATTTTCTGTCTTCTCTATCTCGCAATCTGGTATTTGGAGCCTTTTTCCTTCTTCCTCTTCTTGAATTCTGATTTAATGATCAGATGTTGTTGTTTGTCTCTATCTTTTTGTCCTTTCAGCCCAAAGAAGCTTGTAGAGAAATGAGTTCAGGGAAGTTGTTTGACAGTTTCATAAGATCAAACTTGAAATTTTCTGAGTATGAAGTTGAAGAAGGCTTGATTCCTGTCACACCCCCCTCTGTAAACAAACGTAAGAACATTGTGATTTCCAATTATAACAGCTAATCTGAAAACTTCTAACTTGTTCATTTGTTTGGTTGAATGATCACTTCAAGCTCCTGAGAAAAGACAGCGTGTCCCATCAGCATACAACTGTTTCATCAAGTAAGATATCAAACTTCCAAACTTCTTACTCATTTTATAGTGAGTTTGGGATCACTTCTAATAGTAGAATATTAGTGAAGGGAAGTACTTCTCTGGCAGATATTAGGTATAGCCGATATTGTCTTCGTTGGCATTCGTTCCCCTTTTCAATCGACATGGGATCTTACAATCCACCCCTTCGGGACCTAGCGTCCTTACTGGCACCCGTTCCTCTCTTAAAACGATATGAGATGTCACAATCGACTCTCCTTCGGGGTCCAGCGTTCTTGCTAGCACTCATTTTCCTGTTCAATCGATGTGGGATCTCAATCTACTCCCTTTGAGGCTCAGTATCCTTGTTAACACTCGTTCTCTTTTTCAATCGATGTGAGATCTTAATTCACCCCCTTTCGGGGCCCAATGTTCTCACTCACACTCGTTCCTCTTTCCAATCGATGTGTGGGATCTCACAATCTAACTCCCTTCGGAGCTCAACGTCCTTGCTAATACGGCGCCCATGTCTGGTCCTTTTTGGGCTTTCTCTTTTAGGCTTCCCCTCAAGGTTTATAAAATACGTCTTTTAGGGAGAGGTTTCTACATTCTTATAAAGAATACTTCATTCTCCTCCTCTCCAACCTAAAGATACTTCATTCCCCTCTGAGGTGAGACCTCACAGCAGACACAATACTTCTAGAAGCACTTTTAGTAGAACCTAAAAGAAGCTTTTAATAAATGGATGGATTCCAAGCACTTATTAACCTTCCAAGCCATTCAAAGCGCACTTAAGTTGTTTAAAAGAATGAATCTAATCTGTTTGTGTTGGAAAAGGGATGAAATCAGAAGGCTCAAAGCTGAAAACCCTCAAATGACTCACAAGGAGGCCTTCAGAACAGCTGCAAAAAATGTAAGCAGCAGCAGTCTCAATCAACTTAATTATGTTCTGTGAATCCTGAATGATTTTGATTTTGATTTTGATTTTGATTTTGATTTTGATCTTTCAGTGGGCAAACTTCCCTCCAACAATCCAACAAAAAGAAGACCCACAGAACACTCAAATTCCAGAGGTAAAAACACAATCTTTGAGATCAGAAGTTATGATATCCAATCAACTCTTCAAACCCATTACACCAAATGGAAAGCAAAACACAAATCATTCATAACGATGCTTGAAAATGCTCCTTTTCCAAAGCCACAAATTTATGAGACTTCCATTAAAAGGGTAGGAAAGCTCATAATAATGAAGGAGTTGGGGCGTTTTTGTGGCAATTTAAAGCAACTGACGCAGTAATCAGAGTTTGTGTGTTTGAAAAGTTTCAGGTTGAGAAGAATGGAAAGTGTTTCCCAAGGCATTCAGTTTTGACATAACTCACCATTTCAGTTGAAGCCATGCCTGCAATGCTTTCACTTTCTGCTCTCTCTCTTACTTCAAAAGGGTTGTTGCCATTGGGAATCAAAGTTTCTTCCTTTTTTTCTCCTTTTCTCAGTCGATTAACTGTCTGGAAAGCTTTGATTTTTATAGAATCTTCTGGCATGTCGGTTTGTGTTTTCTTTACTAAATCGCCCTTTTCAACTTTGAAACTATCAAACCAGAATTCTTGGTTCAGAAACAAGAATTGAATGCCCAGTTCCCACTCCAAATCAATTTTAATTTTAAAATTATTAGATAATATGAAATTGGTGAAACGTTCGATTTTCATCTCATTTTAGAAAAATAGTGATGAGATAAATGGACTTCTAACAAATTATAACATAAGCGTAACAATGGAAGATAAAAGGGTCCATAATTCCATAAGAGTCCATAATGGAGTGTTGTGAGATTACATATCAATTGAAGACCAAAAATATGTATATTTTAGAAATAAGTTGATTGGCATTATAATTATTATTATTACTTTAAAAAATTTTACTTAAAATTAGACTCTGTTTGGATTCCAACGAAAACAAATTGAGAATTTAATGGGAGTGAGAGATTGCCTTTCTAGAATACCAGCTAAACGATCCAGTAAGTGTCATCATGGGCCTTGAGGCACATGGCCTATAATTATGTGGGCCTCCAAGAAGCCCATAAAATGCAATAAAAAGTATATTGGGGTGAGAGAGGCTCGAACTCTCGACCTCAGGATAACTCTTTAGCTATGAGACCTACGCGCTAGCCAACTGCGCCACCACCCCATTGATGCGATCCAAGAATTTAATTATTTATAAAAGAAACAAATTGTCCTTTTCTAGAATATCAGGCAAACGAGGCCAGAAGCCCATTAATTTCGTGGGCCTCAAAGAAGCCCATGAAAGAAGTACGGTCTTTTCTCAAATTTTACTAGGCCAAGAACTAAAAATTATCTATAGGAGTAGAAATTACGTTGGTTGGACGCTATAATTTTTCTTTTTCTTTTTTTTTCCTATGAATTATTATTAATTTTATTAAAATATTTTATAATATACTATTTAAAAAATTACGTTTAAAGTTATTTAAATAAAAGTTTCTCTTAAAAAATTATTATTATGGTTGAAAAAATAAAAACAAATTTTTTTGGGTGAACCGGGCCCTGTGGATTCCGAGGACTCATTGTTTTGATTCCAACAAATAAAAACATTTTCTTATTCGGAAAAAAGAAAAAAAATTGCTTTTCTAGAATATCGGCTAAACGATCTAGAAAGTGTCATCATGGGCCTTGAGGCACATGGCCTACAATTCTGTGGGCCTCCAAGAAGAAGCCCATACAATGGAGTAAAATTATATTGGGGTGAGAGAGGCTCGAACTCTCGACCTCAGGATCACTCTTTAGCTATGAGACCTACGCGCTAGCCAACTGCGCCACCACCCCATTTGGAATTTATTATTTTATAAAATATTACTATCATGTTTTCAGATTTTACTTGTATCTTGTGAGATCCTATGTCGGTTAGAAAGGAAAATGAAGCATTTTTTGGGTGTGCAAACCTTTCCCAAACAAACACGTTTTAAAATCGTGAAGCTGATGTCGATACGAATGTGCCAAAGTGGACAATATTTTCTAGTGGTGGGCTTGAGTTGTTACAAATGATATAGCAAAACATAAAGCGGTGTGTCAGCGAAGATGCTGGGTCTCCAAGGGGGGTGAATTGTGAGATCTCACATCGATTGAAGAGGGGAACAAAACATTCGTTATAAGGGTGTGAAAACCTTTCCCTAATAGACACATTCTAGAACGATTAGTCTAACGGCGATACGTAACCATTTTGACTCGAAAATATCTACTAGCGGTAGGTTTTGGCTATTAAAATACCCCTATAACAAAAATGGCCAAGGGGTGAAACCACTTCGAGGTATTTTTCTATTTACAATGCGGGTGCATAGTCTTTTTTTTGGTCATCATTATAGTTTTACTATAATCTCTAGTGATCCTCGAATACCAAGTATGAAGCTTTTAATTTTTGGATTTTGTTAGAATTATATTACTCGATCATAAATAAATCTAACATATGAAATATATTATTGTATAGAATTTCCTAATGGTTCTTAGATGAACTTGTTTGGAAATTACTAAAAAATTTAAATCAAGAATTAAATTTTTCTTTTTATAACTAAAAGGATTGTAACCCAAATAGTTGTGTTCGTTGAGATCCAAACTACAACTATCAATCTATCGAAGAAGGTTAGAGCTTAACGATTGAGCTAATTTTTCTCTCTCTCCTTCTCTCAAGTTCTCAAAAGATTCCGTTGCCGGCGCCGGCGTCCAAGGTGAGTTCCCAATCTTCTACCAGAATCGTCTTTTTCAGAGAGGTTTTTGTGTTTAATTGGTGTCTGCTCCGGCCATGTTGGGTTTTGCTTACTTCAAGCTCTTAATCGAACGGCTTGTTTATTGTTATCTTCTTCGGATCGTTTCTTATCAATTCCGGATCCGATTTTCTGTATCTTAGGTTAAATAATTTCAAGGTTTCTGTCGGCAGCGATGTTGGAAAGATCTCCGGTGGTGATGGAAAGGAATTCTTGAATTTTGATTTCAGCTTCTGA

mRNA sequence

ATGAACCATCTCTTTGAACTTCCTGAAAAGATTTGCTATGTGCAATGTGGAATCTGCACCACCATTTTGCTGGTCAGCGTGCCGTGCAGCAGCTTGTCGATGGAGGTGACGGTGACGTGCGGCCACTGCTCAAGCCTCCTTTCTGTTAACATGCTGAGAGCCACTCTGGTTCCTCTTCATTTTCTGTCTTCTCTATCTCGCAATCTGCCCAAAGAAGCTTGTAGAGAAATGAGTTCAGGGAAGTTGTTTGACAGTTTCATAAGATCAAACTTGAAATTTTCTGAGTATGAAGTTGAAGAAGGCTTGATTCCTGTCACACCCCCCTCTGTAAACAAACTTCTCAAAAGATTCCGTTGCCGGCGCCGGCGTCCAAGGTTAAATAATTTCAAGGTTTCTGTCGGCAGCGATGTTGGAAAGATCTCCGGTGGTGATGGAAAGGAATTCTTGAATTTTGATTTCAGCTTCTGA

Coding sequence (CDS)

ATGAACCATCTCTTTGAACTTCCTGAAAAGATTTGCTATGTGCAATGTGGAATCTGCACCACCATTTTGCTGGTCAGCGTGCCGTGCAGCAGCTTGTCGATGGAGGTGACGGTGACGTGCGGCCACTGCTCAAGCCTCCTTTCTGTTAACATGCTGAGAGCCACTCTGGTTCCTCTTCATTTTCTGTCTTCTCTATCTCGCAATCTGCCCAAAGAAGCTTGTAGAGAAATGAGTTCAGGGAAGTTGTTTGACAGTTTCATAAGATCAAACTTGAAATTTTCTGAGTATGAAGTTGAAGAAGGCTTGATTCCTGTCACACCCCCCTCTGTAAACAAACTTCTCAAAAGATTCCGTTGCCGGCGCCGGCGTCCAAGGTTAAATAATTTCAAGGTTTCTGTCGGCAGCGATGTTGGAAAGATCTCCGGTGGTGATGGAAAGGAATTCTTGAATTTTGATTTCAGCTTCTGA

Protein sequence

MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLHFLSSLSRNLPKEACREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNKLLKRFRCRRRRPRLNNFKVSVGSDVGKISGGDGKEFLNFDFSF

Homology

[Close]

BLAST of Csor.00g056130 vs. ExPASy Swiss-Prot
Match: Q9LDT3 (Axial regulator YABBY 4 OS=Arabidopsis thaliana OX=3702 GN=YAB4 PE=1 SV=2)

HSP 1 Score: 100.5 bits (249), Expect = 1.7e-20
Identity = 47/66 (71.21%), Postives = 59/66 (89.39%), Query Frame = 0


Query: 1  MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH 60
          +NHLF+LP +IC+VQCG CTTILLVSVP +SLSM VTV CGHC+SLLSVN+++A+ +PLH
Sbjct: 11 LNHLFDLPGQICHVQCGFCTTILLVSVPFTSLSMVVTVRCGHCTSLLSVNLMKASFIPLH 70

Query: 61 FLSSLS 67
           L+SLS
Sbjct: 71 LLASLS 76

[Close]

BLAST of Csor.00g056130 vs. ExPASy Swiss-Prot
Match: A2X7Q3 (Protein YABBY 4 OS=Oryza sativa subsp. indica OX=39946 GN=YAB4 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.1e-09
Identity = 37/66 (56.06%), Postives = 42/66 (63.64%), Query Frame = 0


Query: 9  EKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVP---------L 66
          E++CYV C  C TIL V VPCSSL   VTV CGHC++LLSVN LR  L+P         L
Sbjct: 23 EQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVN-LRGLLLPAPAPAPANQL 82

[Close]

BLAST of Csor.00g056130 vs. ExPASy Swiss-Prot
Match: Q6H668 (Protein YABBY 4 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB4 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.1e-09
Identity = 37/66 (56.06%), Postives = 42/66 (63.64%), Query Frame = 0


Query: 9  EKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVP---------L 66
          E++CYV C  C TIL V VPCSSL   VTV CGHC++LLSVN LR  L+P         L
Sbjct: 23 EQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVN-LRGLLLPAPAPAPANQL 82

[Close]

BLAST of Csor.00g056130 vs. ExPASy Swiss-Prot
Match: Q01JG2 (Protein YABBY 5 OS=Oryza sativa subsp. indica OX=39946 GN=YAB5 PE=3 SV=2)

HSP 1 Score: 63.2 bits (152), Expect = 3.1e-09
Identity = 35/62 (56.45%), Postives = 42/62 (67.74%), Query Frame = 0


Query: 9  EKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLHFLSSLSRN 68
          E++CYV C  C TIL V VPCSSL   VTV CGHC++LLSVN LR  L+P    +S +  
Sbjct: 29 EQLCYVHCNFCDTILAVGVPCSSLFKTVTVRCGHCANLLSVN-LRGLLLPA--AASTANQ 87

Query: 69 LP 71
          LP
Sbjct: 89 LP 87

[Close]

BLAST of Csor.00g056130 vs. ExPASy Swiss-Prot
Match: Q0JBF0 (Protein YABBY 5 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB5 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.1e-09
Identity = 35/62 (56.45%), Postives = 42/62 (67.74%), Query Frame = 0


Query: 9  EKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLHFLSSLSRN 68
          E++CYV C  C TIL V VPCSSL   VTV CGHC++LLSVN LR  L+P    +S +  
Sbjct: 29 EQLCYVHCNFCDTILAVGVPCSSLFKTVTVRCGHCANLLSVN-LRGLLLPA--AASTANQ 87

Query: 69 LP 71
          LP
Sbjct: 89 LP 87

[Close]

BLAST of Csor.00g056130 vs. NCBI nr
Match: KAG6601510.1 (Axial regulator YABBY 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 309 bits (791), Expect = 5.85e-106
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH 60
           MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH
Sbjct: 1   MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH 60

Query: 61  FLSSLSRNLPKEACREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNKLLKRFRCR 120
           FLSSLSRNLPKEACREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNKLLKRFRCR
Sbjct: 61  FLSSLSRNLPKEACREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNKLLKRFRCR 120

Query: 121 RRRPRLNNFKVSVGSDVGKISGGDGKEFLNFDFSF 155
           RRRPRLNNFKVSVGSDVGKISGGDGKEFLNFDFSF
Sbjct: 121 RRRPRLNNFKVSVGSDVGKISGGDGKEFLNFDFSF 155

[Close]

BLAST of Csor.00g056130 vs. NCBI nr
Match: KAG7032292.1 (Axial regulator YABBY 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 221 bits (562), Expect = 9.10e-71
Identity = 116/128 (90.62%), Postives = 119/128 (92.97%), Query Frame = 0


Query: 1   MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH 60
           MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH
Sbjct: 1   MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH 60

Query: 61  FLSSLSRNLPKEACREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNKLLKRFRCR 120
           FLSSLSRNLPKEACREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNK  ++   R
Sbjct: 61  FLSSLSRNLPKEACREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNKPPEK---R 120

Query: 121 RRRPRLNN 128
           +R P   N
Sbjct: 121 QRVPSAYN 125

[Close]

BLAST of Csor.00g056130 vs. NCBI nr
Match: XP_022985888.1 (axial regulator YABBY 4 isoform X4 [Cucurbita maxima])

HSP 1 Score: 219 bits (558), Expect = 6.05e-70
Identity = 115/128 (89.84%), Postives = 118/128 (92.19%), Query Frame = 0


Query: 1   MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH 60
           MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH
Sbjct: 1   MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH 60

Query: 61  FLSSLSRNLPKEACREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNKLLKRFRCR 120
           FLSSLSRNLPKE CREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNK  ++   R
Sbjct: 61  FLSSLSRNLPKETCREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNKPPEK---R 120

Query: 121 RRRPRLNN 128
           +R P   N
Sbjct: 121 QRVPSAYN 125

[Close]

BLAST of Csor.00g056130 vs. NCBI nr
Match: XP_022985875.1 (axial regulator YABBY 4 isoform X2 [Cucurbita maxima])

HSP 1 Score: 219 bits (558), Expect = 6.46e-70
Identity = 115/128 (89.84%), Postives = 118/128 (92.19%), Query Frame = 0


Query: 1   MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH 60
           MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH
Sbjct: 1   MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH 60

Query: 61  FLSSLSRNLPKEACREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNKLLKRFRCR 120
           FLSSLSRNLPKE CREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNK  ++   R
Sbjct: 61  FLSSLSRNLPKETCREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNKPPEK---R 120

Query: 121 RRRPRLNN 128
           +R P   N
Sbjct: 121 QRVPSAYN 125

[Close]

BLAST of Csor.00g056130 vs. NCBI nr
Match: XP_022985867.1 (axial regulator YABBY 4 isoform X1 [Cucurbita maxima])

HSP 1 Score: 219 bits (558), Expect = 1.02e-69
Identity = 115/128 (89.84%), Postives = 118/128 (92.19%), Query Frame = 0


Query: 1   MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH 60
           MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH
Sbjct: 1   MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH 60

Query: 61  FLSSLSRNLPKEACREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNKLLKRFRCR 120
           FLSSLSRNLPKE CREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNK  ++   R
Sbjct: 61  FLSSLSRNLPKETCREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNKPPEK---R 120

Query: 121 RRRPRLNN 128
           +R P   N
Sbjct: 121 QRVPSAYN 125

[Close]

BLAST of Csor.00g056130 vs. ExPASy TrEMBL
Match: A0A6J1JEX5 (axial regulator YABBY 4 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111483786 PE=3 SV=1)

HSP 1 Score: 219 bits (558), Expect = 2.93e-70
Identity = 115/128 (89.84%), Postives = 118/128 (92.19%), Query Frame = 0


Query: 1   MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH 60
           MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH
Sbjct: 1   MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH 60

Query: 61  FLSSLSRNLPKEACREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNKLLKRFRCR 120
           FLSSLSRNLPKE CREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNK  ++   R
Sbjct: 61  FLSSLSRNLPKETCREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNKPPEK---R 120

Query: 121 RRRPRLNN 128
           +R P   N
Sbjct: 121 QRVPSAYN 125

[Close]

BLAST of Csor.00g056130 vs. ExPASy TrEMBL
Match: A0A6J1JCH4 (axial regulator YABBY 4 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483786 PE=3 SV=1)

HSP 1 Score: 219 bits (558), Expect = 3.13e-70
Identity = 115/128 (89.84%), Postives = 118/128 (92.19%), Query Frame = 0


Query: 1   MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH 60
           MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH
Sbjct: 1   MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH 60

Query: 61  FLSSLSRNLPKEACREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNKLLKRFRCR 120
           FLSSLSRNLPKE CREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNK  ++   R
Sbjct: 61  FLSSLSRNLPKETCREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNKPPEK---R 120

Query: 121 RRRPRLNN 128
           +R P   N
Sbjct: 121 QRVPSAYN 125

[Close]

BLAST of Csor.00g056130 vs. ExPASy TrEMBL
Match: A0A6J1J630 (axial regulator YABBY 4 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483786 PE=3 SV=1)

HSP 1 Score: 219 bits (558), Expect = 4.94e-70
Identity = 115/128 (89.84%), Postives = 118/128 (92.19%), Query Frame = 0


Query: 1   MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH 60
           MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH
Sbjct: 1   MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH 60

Query: 61  FLSSLSRNLPKEACREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNKLLKRFRCR 120
           FLSSLSRNLPKE CREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNK  ++   R
Sbjct: 61  FLSSLSRNLPKETCREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNKPPEK---R 120

Query: 121 RRRPRLNN 128
           +R P   N
Sbjct: 121 QRVPSAYN 125

[Close]

BLAST of Csor.00g056130 vs. ExPASy TrEMBL
Match: A0A6J1H0F2 (axial regulator YABBY 4-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111458453 PE=3 SV=1)

HSP 1 Score: 216 bits (550), Expect = 4.83e-69
Identity = 114/128 (89.06%), Postives = 118/128 (92.19%), Query Frame = 0


Query: 1   MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH 60
           MNH FELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH
Sbjct: 1   MNHPFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH 60

Query: 61  FLSSLSRNLPKEACREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNKLLKRFRCR 120
           FLSSLSRNLPKEACREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSV+K  ++   R
Sbjct: 61  FLSSLSRNLPKEACREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVHKPPEK---R 120

Query: 121 RRRPRLNN 128
           +R P   N
Sbjct: 121 QRVPSAYN 125

[Close]

BLAST of Csor.00g056130 vs. ExPASy TrEMBL
Match: A0A6J1GXN8 (axial regulator YABBY 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111458453 PE=3 SV=1)

HSP 1 Score: 216 bits (550), Expect = 5.16e-69
Identity = 114/128 (89.06%), Postives = 118/128 (92.19%), Query Frame = 0


Query: 1   MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH 60
           MNH FELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH
Sbjct: 1   MNHPFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH 60

Query: 61  FLSSLSRNLPKEACREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVNKLLKRFRCR 120
           FLSSLSRNLPKEACREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSV+K  ++   R
Sbjct: 61  FLSSLSRNLPKEACREMSSGKLFDSFIRSNLKFSEYEVEEGLIPVTPPSVHKPPEK---R 120

Query: 121 RRRPRLNN 128
           +R P   N
Sbjct: 121 QRVPSAYN 125

[Close]

BLAST of Csor.00g056130 vs. TAIR 10
Match: AT1G23420.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 100.5 bits (249), Expect = 1.2e-21
Identity = 47/66 (71.21%), Postives = 59/66 (89.39%), Query Frame = 0


Query: 1  MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH 60
          +NHLF+LP +IC+VQCG CTTILLVSVP +SLSM VTV CGHC+SLLSVN+++A+ +PLH
Sbjct: 11 LNHLFDLPGQICHVQCGFCTTILLVSVPFTSLSMVVTVRCGHCTSLLSVNLMKASFIPLH 70

Query: 61 FLSSLS 67
           L+SLS
Sbjct: 71 LLASLS 76

[Close]

BLAST of Csor.00g056130 vs. TAIR 10
Match: AT4G00180.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 60.1 bits (144), Expect = 1.8e-09
Identity = 31/55 (56.36%), Postives = 39/55 (70.91%), Query Frame = 0


Query: 5  FELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNM-LRATLVP 59
          F   +++CYV C  C T+L VSVP SSL   VTV CGHCS+LLSV + +RA L+P
Sbjct: 19 FSSTDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALLLP 73

[Close]

BLAST of Csor.00g056130 vs. TAIR 10
Match: AT1G08465.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 58.5 bits (140), Expect = 5.4e-09
Identity = 27/43 (62.79%), Postives = 34/43 (79.07%), Query Frame = 0


Query: 9  EKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNM 52
          E++CYV C  CTTIL VSVP +SL   VTV CGHC++LLS+N+
Sbjct: 8  ERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNI 50

[Close]

BLAST of Csor.00g056130 vs. TAIR 10
Match: AT2G26580.1 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 57.8 bits (138), Expect = 9.2e-09
Identity = 32/59 (54.24%), Postives = 38/59 (64.41%), Query Frame = 0


Query: 9  EKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLHFLSSLSR 68
          E++CY+ C  C  IL V+VPCSSL   VTV CGHC++L SVNM  A       L SLSR
Sbjct: 9  EQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAA-------LQSLSR 60

[Close]

BLAST of Csor.00g056130 vs. TAIR 10
Match: AT2G26580.2 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 57.8 bits (138), Expect = 9.2e-09
Identity = 32/59 (54.24%), Postives = 38/59 (64.41%), Query Frame = 0


Query: 9  EKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLHFLSSLSR 68
          E++CY+ C  C  IL V+VPCSSL   VTV CGHC++L SVNM  A       L SLSR
Sbjct: 9  EQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAA-------LQSLSR 60

The following BLAST results are available for this feature:

BLAST of Csor.00g056130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LDT3	1.7e-20	71.21	Axial regulator YABBY 4 OS=Arabidopsis thaliana OX=3702 GN=YAB4 PE=1 SV=2	[more]
A2X7Q3	3.1e-09	56.06	Protein YABBY 4 OS=Oryza sativa subsp. indica OX=39946 GN=YAB4 PE=3 SV=1	[more]
Q6H668	3.1e-09	56.06	Protein YABBY 4 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB4 PE=2 SV=1	[more]
Q01JG2	3.1e-09	56.45	Protein YABBY 5 OS=Oryza sativa subsp. indica OX=39946 GN=YAB5 PE=3 SV=2	[more]
Q0JBF0	3.1e-09	56.45	Protein YABBY 5 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB5 PE=2 SV=1	[more]

BLAST of Csor.00g056130 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6601510.1	5.85e-106	100.00	Axial regulator YABBY 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7032292.1	9.10e-71	90.63	Axial regulator YABBY 4, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022985888.1	6.05e-70	89.84	axial regulator YABBY 4 isoform X4 [Cucurbita maxima]	[more]
XP_022985875.1	6.46e-70	89.84	axial regulator YABBY 4 isoform X2 [Cucurbita maxima]	[more]
XP_022985867.1	1.02e-69	89.84	axial regulator YABBY 4 isoform X1 [Cucurbita maxima]	[more]

BLAST of Csor.00g056130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JEX5	2.93e-70	89.84	axial regulator YABBY 4 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111483786 P...	[more]
A0A6J1JCH4	3.13e-70	89.84	axial regulator YABBY 4 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483786 P...	[more]
A0A6J1J630	4.94e-70	89.84	axial regulator YABBY 4 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483786 P...	[more]
A0A6J1H0F2	4.83e-69	89.06	axial regulator YABBY 4-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1GXN8	5.16e-69	89.06	axial regulator YABBY 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of Csor.00g056130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23420.1	1.2e-21	71.21	Plant-specific transcription factor YABBY family protein	[more]
AT4G00180.1	1.8e-09	56.36	Plant-specific transcription factor YABBY family protein	[more]
AT1G08465.1	5.4e-09	62.79	Plant-specific transcription factor YABBY family protein	[more]
AT2G26580.1	9.2e-09	54.24	plant-specific transcription factor YABBY family protein	[more]
AT2G26580.2	9.2e-09	54.24	plant-specific transcription factor YABBY family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006780	YABBY protein	PFAM	PF04690	YABBY	coord: 8..71 e-value: 2.9E-22 score: 80.0
IPR006780	YABBY protein	PANTHER	PTHR31675	PROTEIN YABBY 6-RELATED	coord: 1..114
None	No IPR available	PANTHER	PTHR31675:SF8	AXIAL REGULATOR YABBY 4	coord: 1..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g056130.m01	Csor.00g056130.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development