Csor.00g054930 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g054930
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	tRNA pseudouridine synthase
Location	Csor_Chr04: 9630122 .. 9636291 (-)
RNA-Seq Expression	Csor.00g054930
Synteny	Csor.00g054930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGAGAACCAGAAGCATAGGCTAGAGTTCAGTTCCGATTCATCACCTCAAAGGCCATTGAAAATTGGAAAGACTACGAACGAAGATCTCCCTGGCGATAAGGAGGAAGCGGAATCCATGAACCGGAATCCTGGAATCCAACGCTACCTTGTCGCAGTCGAATATATTGGAACTCGTTTTTCTGGTTCTCAGCAGCAGCCCAACTGTCGTACGGTGGTCGGCGTGCTTGAGGTACACCGCCTTTGCCATCTTTCATTACTCTGCGTATCGTTCTTAACCGATGAAACTCTTTGAAATGGAACATAATTTCTTTGTATCATTAAGAAACGGGTTGAACAATTGGTCTCTTGCATTATTCTATAAATGATTACTTCTACTTCTCAGGAAGCGTTCCGGAAGTTTATCGGTCAATCAGTTTCAGTGTTTTGTTCTAGCAGAACTGTAAGTTTTTCTTATTCTGGATATTTGTTCCTTTTTGTCATATAAAAACCAGTTTTATTGCTGTTATTAGAATGTTCAGTGTACTTGTAGGGTAGCTTCCATGACTTTTATCTTGCTGAATCTTCTGTCCTCCGGTAGTTCTTCTCCCACTAGCTTTGATTTGCGCAGAGTAGGATATGAAACTGAATTGGTAGTTTGATTGTAGGGCTTATGTTCATTTGAGATGCATGGACTTGCCTCTATTGTTCTAAGTCGGATTTTAAAACAAAACCATTGGAACTGTGAGATCCCATATCGGTTGGAGAGGAGAACGAAACATTTATTATAAGGGTGTAGAAACCTCTCCCTGACAGACGCGTTTTAAAACTGTGAGGCTGATGGCGATAGATAACGGGCCAAAGCGGACAATATCTGTTAGCGATGAGCTTGGGCTGTTACAAATGGTATCAGAGCCAGACACCGAGCGGTGTGCTAGCGAGGGCACTGGCCCCCAAGGGGGTGGATTGTGAGATCCCACATTGGTTGAAGAGGAGAATGAAGCATTCCTTATAAGGGTGTAGAAACCTCTCCCTGACAGACGCGTTTTAAAATAGTGAGGCTGACGACGATACATAACGGGCCAAAGCGGACAATATCTGTTAGTGTTGGGCTTGGGTTGTTACAAATGGTATCAGAGCCAGACACTGAGCGGTGTGCCAGCGAGGGCACTGGCCCCCAAGCGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAGTTTTCCTTATAAGGGTGTGAAAACGTCACCCTAACAGACATGTTTTAAAATTGTAAGGTTGACGGCGATACATAACGAGCCAAAATGGATAGTATTTGTTAGAGCCAGGCACCGAGCGGTGTGCTAGCAAAGACGCTAGCCTCCAAGGGAGTGGATTGTGAGATCCCACATCATTTGGAGAGGGGAATGAAGCATTCCTTATAAGGGTGTGGGAACCTCTCTTAACAAACGCATTTTAAAATCGTGAAACTAATAGCATACGTAATGGGCCAAAGCAGACAATACCTGTTAGTGGTGAACTAGGAGCATTTTAGGATAAGTTGTTTTTCTGGCTTGTTTGCTGCAGACTGCAGTGCATCTTGCTCCATATTCACCTGTTCTGAGTTGTGCTTGGTAGAAAGGGATCCGTTATTGAGCTGCTCTATTGACTTGATTGATTGCTTTGATAATCGTATTCCCATGCGTCACATTACATGTCTTGCTACCATAAGTAGATTAAGTTATCCCATTCACGTTGTGACTTTCCTTCTTTTTTCAATGAAGGATGCTGGAGTACATGCCTTATCAAATGTTTGTCATGTTGATGTTGAGCGCATAAGCAAAAGAAAGCCTGGAGAAGTGGTTTGTCCCTTTGTATAGAATATAAGCATCTCTCTCCCCTTTTCATATGTACACATAATATATGCTAACTAGATGAGTAATTTCCCCTGAAAACTTTTATTCACTCGTGGACTTTGTTGTTGAGATAAAACTTTCTTATCCTTGAAAACATGAGTTTGAAGTAATGGTGCTCAACTTTGCTACAGAGATGCTAACTTCTTTTTCCTAACTATGATGCAGTTACCACCTCATGAACCGAGTGTCGTTCGTAGGGCCGTGAATCATTTCTTACAGGTTCGGTTCTCTCCTAGCCAATCCCTTTTTTGAGCTACTTTTGCTTCTCTCGATTTTCGTTGTTTCGATCTTGTGCTTCATTTTTAACTCAACGATGCTAAGTTATAGTCGTGTTAAAATTTCCATTTTCAAACTATAAAATTTATCTTCCCTTTTAAATTTGCAAGCATGATAGAATCTTCCCTTTTACCAGTACTATTGACTATTGTTCATAGGCGATAGATAAGCGAGTGTAACGGCCCAAGCCCCCCACCGCTAGCAAATATTGTCCTCTTTGGAATTTCCGTTTCGTGCTTCTTCCTAAAGTTTTAAAATGCGTCTGCTAGGGAGAGGTTCCCACACCAAGGATGTTTTGTTCCCCTATCCAACTTACGTGGGATCTCACAATCCACCCCCTTCGGGGCCCAGCATTCTTGCTGGCACACTGCCTGGTGCCCAACCCCCCTTCAGGGCTCAGCCTCTTCACTGGCACACCGCCTGGTGCCCAACCCCCCTTCGTTCTTTGTCATCTTCTTCCTTAAGCCGCTGCCACCCAAAGTCCACGTCGTCCCGTCGCTGTCTATTTCCCACATCACCTCGTGCCCCTTCGCACATCAAAAAACCGCCATCCAGCAACCACATCACCGCTGCGAGTGAACTTCGTTGCCAAAATCGACATTAAGAGGATTAAACGCAGCAAAGATACAATGCGGTTTTCTCTTGGGATAGATAGGATTGGAACCAATCTCTACGTGGACAGCAGGCTCGATTTAAATCGAAGCGAACCAATAGCTGTAGGAACGATTAGTAAATGAGCTCTCTAGGTAAGGGACCCTTCTGTTGAAACTAAATGTTTTTTGGTTTTAAAAAAGGGTCGAGCAGATTTGTCATATGGTTGTGCGCTGTGGGTTGTGTAATTGGTTGGTGGGCGATAAATATTGGGTCATTGATGACTGTTAAACACACAGTATAAATTGTTGAATGTGTGTAGTTGTATTCGATGTGAGTTGTATGACACAATATACGTGTGTTCATGAAATTCAACGTTTTACATTTTGGGACCTATTGCATGCATATTGTGTTTATTGATGGCGATGGTTAAGGGACTTGTGATAATAGTTACACGCCGTGTGTTTCGAGTAACTAGCCACTAATAATCACTTTCGGTGATGATGGTAGAAAATGACTATCAAGGTAAGGATTACACGCGGTGTGTTTCGGGTAACCAGCTGTGGATAGTCATATTAAGGAAATAAGGAAGGATGTTGATATCCTCGTGGTAATGGTTACACGTTGTGTGTTTCGGGGTTTTACGTTTTGGGACCTATTGCATGCATATTGTGTTTATTGGTGGTGATGGTTAAGGGACTTGTGATAATAGTTACACGCCGTGTATTTCGGGTAACTAGCCACTAATAATCACTTTCGGTGATGATGGTAGAAAATGACTATTAAGGTAAGGGTTACACGCTGTGTGTTTCGGGTAACCTACCAGGGATAATCATTTTAAGGAGTAAAGGTGGGCGTTGATTTTCTTGTGGCAATAATCACCCGCTGCGTGTTTCGGGTGATTAACCACTAGGGTCCCTCGATTTTGGTTGATCGTCTTGTGACGATTTATGTATTTGACCCAATAGGGGAGTTCCTTAGTGAGTATTTCCTATTTTTAAAATGGTTTTCAGGCGAAGCTGTGTCACAGAGGTGACGAGTTGGATGCCCAAGTCAGTCATGGGGCAACTCAAGGAGTTTATGTTCATTGGAATTTTATTTTGATGGATAGACGTTTTCGCACTTTTGTTTATTAATTTAAATTATGTGTGTGAACGCCTAGTTATGGAACCAGATGGTCACACCAGATTACCTTTTGATTTTAATTTTTAGGCGGCATGTTTCTAACCTTGTAAGGGTACCCACACCTTATTTTAATAAATGATCGTTTTTGCATAGTTTTCATTAATTTTTAAATAAATCAAATTATTTTTGGTAACGGCCTTGACCACTACTTATAAGATAAGTCGGGTCGTTACAGAAACATTCTTTATAAGGGTGTGGAATCCTCTCTTTAGCAGACACATTTTAAAACCTCTTTATGTTTAAACATTTTTATGCGGCATGTTTTTAACCTTTTGAAGTTGAAGGTACCCCACACATGATTTTAATAAATGATCGTTTTTGCATACTTTTCATCTATTTTTATATAAATCAAATTATTTTTGGTAACGGCCATGATCACTACTTATAAGATAAATCGAGTCGTTATAAATGGTATTAGAGCTAGACACCAGACCATATACCATCGAGGAGGCTGTTCCTCGAAGGGGGTAGACACGAGGCAATGTGCAATAAGGATGCTGGGGTCCCACATCAATTGGATGAAGGAAAGAGTGTCAGCGAGGACGCTAGGCCCTGAAGGGGGTGGATTGCAATGTCCCACATTGGTTGGTGAGGAGAACAAAACACCCTTTATAAGGGTGTGGCCAGCGAGGAGGCTGTTCCCCGAAAGGGGTAGACACGAGGCGATGTGCAGTAAGGATGCTGGGGTCCCACATCAATTGGATGAAGGAAAGAGTGTCAGCGAGGACGCTAGGCCCCGAAGGGGGGTGGATTGCAATGTCCCACATTGGTTGGTGAGGAGAACAAAACACCCTTTATAAGGGTGTTGAAACCTTCTCCTAGCAGACGTGTTTTAAATCCTTGAGGGGAAGGCCAAAAGGGAAAGCCCAAAGAGGACAATATCTACTAGCAGTGGGCCTGGGTCGTTACAGTTTCGCTTCCCTCTCCAACCGATGTGGATTCTCACAGCGAGCACCTAAGAAGAATCTTCCTTTTTCCAGCTTGAACCTTTGCTTTTTATTGTATGAGACAAAGAAAATGATGAAAGGTATCTGTGTCTGTTTTGATTCCAGAAAAATGACGGCGATGTTACGGTAGTTGATGTTCGAAGTGTTCCTAATGATTATCATGCGAGATATAAAGCTCAAGAGCGTACGTGAGTATTGTCCATCCAGTTGATACCATCGTTGCCTGTTAGACAGTAGAATTAATTGTCCATACGTACATAACACAATTTTTTGTATCTCATGAAACATTTTCAGATACTTTTATCGGTTAGTTTCTGGGCCAGAAACTTTGTCAAGCTTTGACAAGGATCGAGTATGGCACGTGCCCGAGATACTGAATATTGGAGCCATGCAGGTATGAACAATTAACATTGCAATGCTGGAGATCATGTCGATTTCGAATTACATTCAGGAACTGATACAACATTATTGGAATGTATGAATTCAGGAGGCATGTAAAGTGCTTGTTGGGCATCATGACTTTAGCTCCTTCAGGGCAGCTGGTTGTCAGGTCACTTAATACTAAAACTATTTATGTTCCCAGCTTATTATACATTTTGTTTGTAACAAAGCCAGGGCGTGGTCGGGGGACGAAACTGTGTATGGTGTAACGTAAATTAGTTTCGATGTGCAGTGCAGGCAAACTCCCCAATGAGAACTCTTGATGAACTAGACGTTTGTGAGGTGGTTTCGACGCCCTATTTTCCATCGTCAATGGAGCGAAAGCAAAGGCAGGGTAAAGAAGGTGAGAATGGAGTGCTACATTCTGAAAGTTATGAGGTTGGATTTGGGATCAGGAGAAGGCATCGTTGTTTCGTTGTGACAGCACGAGCACGCTCGTTTCTTTATCATCAGGTAGGTAATAAACATAACCAACCCTAAGAGACTGTTTCTTTTCTAGTAATGGAGAAAAGGGTTTTACGAGATTGATTGATTGATTGATTAGTTAATCTGGACTCGAATATTTCTTAGGTGAGACTGATGGTTGGCGTTCTTAAAGCGGTCGGAACCGGAGATCTAACCGTAGGAGATGGTAGGTGGTTGGACTGCAACATATACAATAGAACATGGCCGTTTGAAGGTAGCTAGCTAACAGTAATATGGTCTTCTGTGTTGTTTGCTGCAGTGGAAAGAATCTTGGAAGCGAAGAATGTGAGTTCAGCAAGTCCGATGGCTCCTGCCTGTGGACTCTACCTAGGACATGTCAAATATGATCTACCGCCGCCACCGCCGGCGCCCACTGAATGA

mRNA sequence

ATGACGGAGAACCAGAAGCATAGGCTAGAGTTCAGTTCCGATTCATCACCTCAAAGGCCATTGAAAATTGGAAAGACTACGAACGAAGATCTCCCTGGCGATAAGGAGGAAGCGGAATCCATGAACCGGAATCCTGGAATCCAACGCTACCTTGTCGCAGTCGAATATATTGGAACTCGTTTTTCTGGTTCTCAGCAGCAGCCCAACTGTCGTACGGTGGTCGGCGTGCTTGAGGAAGCGTTCCGGAAGTTTATCGGTCAATCAGTTTCAGTGTTTTGTTCTAGCAGAACTGATGCTGGAGTACATGCCTTATCAAATGTTTGTCATGTTGATGTTGAGCGCATAAGCAAAAGAAAGCCTGGAGAAGTGTTACCACCTCATGAACCGAGTGTCGTTCGTAGGGCCGTGAATCATTTCTTACAGAAAAATGACGGCGATGTTACGGTAGTTGATGTTCGAAGTGTTCCTAATGATTATCATGCGAGATATAAAGCTCAAGAGCGTACATACTTTTATCGGTTAGTTTCTGGGCCAGAAACTTTGTCAAGCTTTGACAAGGATCGAGTATGGCACGTGCCCGAGATACTGAATATTGGAGCCATGCAGGAGGCATGTAAAGTGCTTGTTGGGCATCATGACTTTAGCTCCTTCAGGGCAGCTGGTTGTCAGGCAAACTCCCCAATGAGAACTCTTGATGAACTAGACGTTTGTGAGGTGGTTTCGACGCCCTATTTTCCATCGTCAATGGAGCGAAAGCAAAGGCAGGGTAAAGAAGGTGAGAATGGAGTGCTACATTCTGAAAGTTATGAGGTTGGATTTGGGATCAGGAGAAGGCATCGTTGTTTCGTTGTGACAGCACGAGCACGCTCGTTTCTTTATCATCAGGTGAGACTGATGGTTGGCGTTCTTAAAGCGGTCGGAACCGGAGATCTAACCGTAGGAGATGTGGAAAGAATCTTGGAAGCGAAGAATGTGAGTTCAGCAAGTCCGATGGCTCCTGCCTGTGGACTCTACCTAGGACATGTCAAATATGATCTACCGCCGCCACCGCCGGCGCCCACTGAATGA

Coding sequence (CDS)

ATGACGGAGAACCAGAAGCATAGGCTAGAGTTCAGTTCCGATTCATCACCTCAAAGGCCATTGAAAATTGGAAAGACTACGAACGAAGATCTCCCTGGCGATAAGGAGGAAGCGGAATCCATGAACCGGAATCCTGGAATCCAACGCTACCTTGTCGCAGTCGAATATATTGGAACTCGTTTTTCTGGTTCTCAGCAGCAGCCCAACTGTCGTACGGTGGTCGGCGTGCTTGAGGAAGCGTTCCGGAAGTTTATCGGTCAATCAGTTTCAGTGTTTTGTTCTAGCAGAACTGATGCTGGAGTACATGCCTTATCAAATGTTTGTCATGTTGATGTTGAGCGCATAAGCAAAAGAAAGCCTGGAGAAGTGTTACCACCTCATGAACCGAGTGTCGTTCGTAGGGCCGTGAATCATTTCTTACAGAAAAATGACGGCGATGTTACGGTAGTTGATGTTCGAAGTGTTCCTAATGATTATCATGCGAGATATAAAGCTCAAGAGCGTACATACTTTTATCGGTTAGTTTCTGGGCCAGAAACTTTGTCAAGCTTTGACAAGGATCGAGTATGGCACGTGCCCGAGATACTGAATATTGGAGCCATGCAGGAGGCATGTAAAGTGCTTGTTGGGCATCATGACTTTAGCTCCTTCAGGGCAGCTGGTTGTCAGGCAAACTCCCCAATGAGAACTCTTGATGAACTAGACGTTTGTGAGGTGGTTTCGACGCCCTATTTTCCATCGTCAATGGAGCGAAAGCAAAGGCAGGGTAAAGAAGGTGAGAATGGAGTGCTACATTCTGAAAGTTATGAGGTTGGATTTGGGATCAGGAGAAGGCATCGTTGTTTCGTTGTGACAGCACGAGCACGCTCGTTTCTTTATCATCAGGTGAGACTGATGGTTGGCGTTCTTAAAGCGGTCGGAACCGGAGATCTAACCGTAGGAGATGTGGAAAGAATCTTGGAAGCGAAGAATGTGAGTTCAGCAAGTCCGATGGCTCCTGCCTGTGGACTCTACCTAGGACATGTCAAATATGATCTACCGCCGCCACCGCCGGCGCCCACTGAATGA

Protein sequence

MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLPGDKEEAESMNRNPGIQRYLVAVEYIGTRFSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPETLSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVVSTPYFPSSMERKQRQGKEGENGVLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPPPAPTE

Homology

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BLAST of Csor.00g054930 vs. ExPASy Swiss-Prot
Match: A7IKI9 (tRNA pseudouridine synthase A OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) OX=78245 GN=truA PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.2e-45
Identity = 115/296 (38.85%), Postives = 156/296 (52.70%), Query Frame = 0


Query: 49  RYLVAVEYIGTRFSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSNVC 108
           RY + +EY GT ++G Q Q + +TV G L +AF++F G+ V V  + RTDAGVHA   V 
Sbjct: 3   RYKLTIEYDGTPYAGWQIQADQQTVQGALAQAFKRFCGEDVHVAGAGRTDAGVHATGQVA 62

Query: 109 HVDVERISKRKPGEVLPPHEPSVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQER 168
           HVD+ R                 VR A+   L+ +   + V+    VP+ + AR+ A +R
Sbjct: 63  HVDLSR-----------HWRSDTVRDAMTAQLRPH--PIAVLSAEEVPDSFDARFSATKR 122

Query: 169 TYFYRLVSGPETLSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPM 228
            Y YR+++    L + D+DR W +P+ L+  AM EA + L+G HDFS+FRAA CQA SP+
Sbjct: 123 HYLYRIINRRPDL-ALDRDRAWRIPQKLDAQAMHEAAQRLLGKHDFSTFRAAECQAASPL 182

Query: 229 RTLDELDVCEVVSTPYFPSSMERKQRQGKEGENGVLHSESYEVGFGIRRRHRCFVVTARA 288
           +TLD+LDV                 R G E                IR       V   A
Sbjct: 183 KTLDQLDV----------------SRSGDE----------------IR-------VITSA 242

Query: 289 RSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKY 345
           RSFL+HQVR MVG L  VG G  +  D+E  L+A + +   PMAPA GLYL  V Y
Sbjct: 243 RSFLHHQVRSMVGSLMRVGEGRWSADDLEAALKAADRTRCGPMAPAAGLYLAAVSY 245

[Close]

BLAST of Csor.00g054930 vs. ExPASy Swiss-Prot
Match: B6IPI0 (tRNA pseudouridine synthase A OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX=414684 GN=truA PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.1e-45
Identity = 118/298 (39.60%), Postives = 156/298 (52.35%), Query Frame = 0


Query: 47  IQRYLVAVEYIGTRFSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSN 106
           +QR+ + +EY G  F G Q+Q N  +V   LEEA  +F  ++V+VFC+ RTDAGVHAL+ 
Sbjct: 1   MQRWKLTLEYDGRPFVGWQRQDNGPSVQQALEEAIYRFTQETVTVFCAGRTDAGVHALAM 60

Query: 107 VCHVDVERISKRKPGEVLPPHEPSVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQ 166
           V  VD+ R +               V+ A+N  L+ +   V V+ V  V  D+HAR+   
Sbjct: 61  VASVDLAREA-----------TADKVQAALNFHLKPH--PVAVLRVEPVAPDFHARFSCL 120

Query: 167 ERTYFYRLVSGPETLSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANS 226
            R Y YR+++     ++ +  RVWHV   L+  AM EA + LVG HDFSSFRA+ CQA S
Sbjct: 121 GRAYLYRILN-RRAPAALEAGRVWHVQGGLDAEAMHEAAQRLVGQHDFSSFRASLCQAKS 180

Query: 227 PMRTLDELDVCEVVSTPYFPSSMERKQRQGKEGENGVLHSESYEVGFGIRRRHRCFVVTA 286
           P++TL +L V                                  VG  +R       + A
Sbjct: 181 PVKTLSDLSVA--------------------------------RVGEEVR-------IVA 240

Query: 287 RARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKY 345
           RARSFL+HQVR MVG LK VG G  T  DV R L A+N S+A P APA GLY     Y
Sbjct: 241 RARSFLHHQVRNMVGTLKLVGEGRWTADDVSRALAARNRSAAGPTAPAAGLYFTEAWY 245

[Close]

BLAST of Csor.00g054930 vs. ExPASy Swiss-Prot
Match: Q2WAT0 (tRNA pseudouridine synthase A OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) OX=342108 GN=truA PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.7e-45
Identity = 118/306 (38.56%), Postives = 154/306 (50.33%), Query Frame = 0


Query: 49  RYLVAVEYIGTRFSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSNVC 108
           RY + VEY GT F+G Q+Q    +V G+LE+A  K  G   ++  + RTDAGVHA   V 
Sbjct: 3   RYRLLVEYDGTPFNGWQRQDKGLSVQGILEKAVEKLCGVPCTLHAAGRTDAGVHATGQVA 62

Query: 109 HVDVERISKRKPGEVLPPHEPSVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQER 168
           HVD+ R            +    VR A+N+ ++     V VV    V  D+HAR+ A  R
Sbjct: 63  HVDLPR-----------DYPADTVRDALNYHMKPK--PVAVVAAELVDEDFHARFSAVGR 122

Query: 169 TYFYRLVSGPETLSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPM 228
            Y YR+V+    L + D+ R W VP  L+  AM E  + L+GHHDFS+FRA+ CQA SPM
Sbjct: 123 AYLYRIVNRRAPL-ALDQHRAWWVPVALDAEAMAEGARRLLGHHDFSTFRASECQAKSPM 182

Query: 229 RTLDELDVCEVVSTPYFPSSMERKQRQGKEGENGVLHSESYEVGFGIRRRHRCFVVTARA 288
           +TLD LDV                                  VG  IR       + A A
Sbjct: 183 KTLDVLDVT--------------------------------RVGEEIR-------IVAEA 242

Query: 289 RSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPP 348
           RSFL+HQVR MVG LK VG G  +  D+ ++LEA++ +   P APA GL L  V Y    
Sbjct: 243 RSFLHHQVRNMVGTLKLVGEGKWSPDDMAKVLEARDRTKGGPTAPAAGLVLTGVSYSASG 255

Query: 349 PPPAPT 355
               PT
Sbjct: 303 GKSGPT 255

[Close]

BLAST of Csor.00g054930 vs. ExPASy Swiss-Prot
Match: A9ILJ7 (tRNA pseudouridine synthase A OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) OX=382640 GN=truA PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.0e-44
Identity = 106/300 (35.33%), Postives = 162/300 (54.00%), Query Frame = 0


Query: 47  IQRYLVAVEYIGTRFSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSN 106
           + R+ + +EY G+ ++G Q+Q    T+ G LE+A  +F GQ +++  + RTDAGVHA   
Sbjct: 1   MSRFKLTLEYDGSNYAGWQRQAKLHTIQGALEQAIFRFSGQQLTITTAGRTDAGVHATGQ 60

Query: 107 VCHVDVERISKRKPGEVLPPHEPSVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQ 166
           V HVD  +          PPH    VR A+N  L++    +++++V +VP+D+ AR+ A 
Sbjct: 61  VAHVDFIK--------NWPPH---TVRDALNALLRQQSEAISILNVENVPDDFDARFSAI 120

Query: 167 ERTYFYRLVS--GPETLSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQA 226
           +R Y +++++   P  L++    RVW +P+ LN  AM EA + LVG HDF++FR+A CQA
Sbjct: 121 KRHYLFKILNRRSPPALNA---KRVWWIPKPLNAQAMHEAAQKLVGQHDFTTFRSAHCQA 180

Query: 227 NSPMRTLDELDVCEVVSTPYFPSSMERKQRQGKEGENGVLHSESYEVGFGIRRRHRCFVV 286
            SP+RTL+ LD+                Q++G+E                         +
Sbjct: 181 KSPIRTLERLDI----------------QKEGEE-----------------------IFI 240

Query: 287 TARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKY 345
            A+ARSFL+HQ+R   G L  VG G  T  D+E  L AK+      +AP  GLYL  V+Y
Sbjct: 241 YAKARSFLHHQIRSFAGSLMEVGIGRWTAQDLEAALHAKDRKRCGVVAPPSGLYLTKVEY 247

[Close]

BLAST of Csor.00g054930 vs. ExPASy Swiss-Prot
Match: A7HPQ3 (tRNA pseudouridine synthase A OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) OX=402881 GN=truA PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.4e-44
Identity = 111/297 (37.37%), Postives = 155/297 (52.19%), Query Frame = 0


Query: 49  RYLVAVEYIGTRFSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSNVC 108
           RY + +EY G+ F G Q Q N R+V  VLEE  + F GQ + +F + RTDAGVHAL  V 
Sbjct: 3   RYKLTIEYDGSPFVGWQAQTNGRSVQQVLEEGIKGFCGQELKIFGAGRTDAGVHALGQVA 62

Query: 109 HVDVERISKRKPGEVLPPHEPSVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQER 168
           HVD E            P  P  +R AVN  ++ +   V +V+   VP+ + AR+ A +R
Sbjct: 63  HVDFE-----------TPVAPDTLRDAVNAHMRPH--PVAIVEAEEVPDSFEARFSAVKR 122

Query: 169 TYFYRLVSGPETLSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPM 228
            Y YR+V+    L + D+ + W V + L+  AM +A + LVG+HDF++FR+  CQA SP+
Sbjct: 123 HYMYRIVNRRAPL-TLDRGQAWLVHKTLDADAMHDAAQALVGNHDFTTFRSVQCQAKSPV 182

Query: 229 RTLDELDVCEVVSTPYFPSSMERKQRQGKEGENGVLHSESYEVGFGIRRRHRCFVVTARA 288
           +T+DE+ V                 R   E E                       +  RA
Sbjct: 183 KTVDEISV----------------SRYADEIE-----------------------IVCRA 242

Query: 289 RSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYD 346
           RSFL++QVR  VG LK VG G  T   VE+ L AK+ ++  P+AP  GLYL  V Y+
Sbjct: 243 RSFLHNQVRSFVGTLKMVGDGSWTRRKVEKALAAKDRAACGPVAPPDGLYLLQVDYE 246

[Close]

BLAST of Csor.00g054930 vs. NCBI nr
Match: KAG6601629.1 (hypothetical protein SDJN03_06862, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 722 bits (1863), Expect = 1.06e-262
Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 0


Query: 1   MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLPGDKEEAESMNRNPGIQRYLVAVEYIGTR 60
           MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLPGDKEEAESMNRNPGIQRYLVAVEYIGTR
Sbjct: 1   MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLPGDKEEAESMNRNPGIQRYLVAVEYIGTR 60

Query: 61  FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSNVCHVDVERISKRKP 120
           FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSNVCHVDVERISKRKP
Sbjct: 61  FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSNVCHVDVERISKRKP 120

Query: 121 GEVLPPHEPSVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPET 180
           GEVLPPHEPSVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPET
Sbjct: 121 GEVLPPHEPSVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPET 180

Query: 181 LSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVV 240
           LSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVV
Sbjct: 181 LSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVV 240

Query: 241 STPYFPSSMERKQRQGKEGENGVLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLMV 300
           STPYFPSSMERKQRQGKEGENGVLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLMV
Sbjct: 241 STPYFPSSMERKQRQGKEGENGVLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLMV 300

Query: 301 GVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPPPAPTE 355
           GVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPPPAPTE
Sbjct: 301 GVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPPPAPTE 355

[Close]

BLAST of Csor.00g054930 vs. NCBI nr
Match: XP_022956590.1 (uncharacterized protein LOC111458281 [Cucurbita moschata])

HSP 1 Score: 713 bits (1841), Expect = 2.48e-259
Identity = 354/356 (99.44%), Postives = 354/356 (99.44%), Query Frame = 0


Query: 1   MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLPGDKEEAESMNRNPGIQRYLVAVEYIGTR 60
           MTENQKHRLEFSSDSSPQRPLKIGKTTNEDL GDKEEAESMNRNPGIQRYLVAVEYIGTR
Sbjct: 1   MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLLGDKEEAESMNRNPGIQRYLVAVEYIGTR 60

Query: 61  FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSNVCHVDVERISKRKP 120
           FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSNVCHVDVERISKRKP
Sbjct: 61  FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSNVCHVDVERISKRKP 120

Query: 121 GEVLPPHEPSVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPET 180
           GEVLPPHEPSVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPET
Sbjct: 121 GEVLPPHEPSVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPET 180

Query: 181 LSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVV 240
           LSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVV
Sbjct: 181 LSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVV 240

Query: 241 STPYFPSSMERKQRQGKE-GENGVLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLM 300
           STPYFPSSMERKQRQGKE GENGVLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLM
Sbjct: 241 STPYFPSSMERKQRQGKEEGENGVLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLM 300

Query: 301 VGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPPPAPTE 355
           VGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPPPAPTE
Sbjct: 301 VGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPPPAPTE 356

[Close]

BLAST of Csor.00g054930 vs. NCBI nr
Match: KAG7032390.1 (truA, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 711 bits (1836), Expect = 2.01e-258
Identity = 354/361 (98.06%), Postives = 354/361 (98.06%), Query Frame = 0


Query: 1   MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLPGDKEEAESMNRNPGIQRYLVAVEYIGTR 60
           MTENQKHRLEFSSDSSPQRPLKIGKTTNEDL GDKEEAESMNRNPGIQRYLVAVEYIGTR
Sbjct: 5   MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLLGDKEEAESMNRNPGIQRYLVAVEYIGTR 64

Query: 61  FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSNVCHVDVERISKRKP 120
           FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSNVCHVDVERISKRKP
Sbjct: 65  FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSNVCHVDVERISKRKP 124

Query: 121 GEVLPPHEPSVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPET 180
           GEVLPPHEPSVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPET
Sbjct: 125 GEVLPPHEPSVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPET 184

Query: 181 LSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQ------ANSPMRTLDEL 240
           LSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQ      ANSPMRTLDEL
Sbjct: 185 LSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQFRCAVQANSPMRTLDEL 244

Query: 241 DVCEVVSTPYFPSSMERKQRQGKEGENGVLHSESYEVGFGIRRRHRCFVVTARARSFLYH 300
           DVCEVVSTPYFPSSMERKQRQGKEGENGVLHSESYEVGFGIRRRHRCFVVTARARSFLYH
Sbjct: 245 DVCEVVSTPYFPSSMERKQRQGKEGENGVLHSESYEVGFGIRRRHRCFVVTARARSFLYH 304

Query: 301 QVRLMVGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPPPAPT 355
           QVRLMVGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPPPAPT
Sbjct: 305 QVRLMVGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPPPAPT 364

[Close]

BLAST of Csor.00g054930 vs. NCBI nr
Match: XP_023524389.1 (uncharacterized protein LOC111788293 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 706 bits (1823), Expect = 1.38e-256
Identity = 351/356 (98.60%), Postives = 351/356 (98.60%), Query Frame = 0


Query: 1   MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLPGDKEEAESMNRNPGIQRYLVAVEYIGTR 60
           MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLPGDKEEAESMNRNPGIQRYLVAVEYIGTR
Sbjct: 1   MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLPGDKEEAESMNRNPGIQRYLVAVEYIGTR 60

Query: 61  FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSNVCHVDVERISKRKP 120
           FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSNVCHVDVERISKRKP
Sbjct: 61  FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSNVCHVDVERISKRKP 120

Query: 121 GEVLPPHEPSVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPET 180
           GEVLPPHEP VVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPET
Sbjct: 121 GEVLPPHEPGVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPET 180

Query: 181 LSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVV 240
           LSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVV
Sbjct: 181 LSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVV 240

Query: 241 STPYFPSSMERKQRQGKEG-ENGVLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLM 300
           STPYFPSSMERKQRQGKE  EN VLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLM
Sbjct: 241 STPYFPSSMERKQRQGKEECENEVLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLM 300

Query: 301 VGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPPPAPTE 355
           VGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPP APTE
Sbjct: 301 VGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPPTAPTE 356

[Close]

BLAST of Csor.00g054930 vs. NCBI nr
Match: XP_022998153.1 (uncharacterized protein LOC111492882 [Cucurbita maxima])

HSP 1 Score: 705 bits (1820), Expect = 3.94e-256
Identity = 349/356 (98.03%), Postives = 351/356 (98.60%), Query Frame = 0


Query: 1   MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLPGDKEEAESMNRNPGIQRYLVAVEYIGTR 60
           MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLPGDKEEAESMNRNPGIQRYLVAVEYIGTR
Sbjct: 1   MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLPGDKEEAESMNRNPGIQRYLVAVEYIGTR 60

Query: 61  FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSNVCHVDVERISKRKP 120
           FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSNVCHVDVERISKRKP
Sbjct: 61  FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSNVCHVDVERISKRKP 120

Query: 121 GEVLPPHEPSVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPET 180
           GEVLPPHEP VVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPET
Sbjct: 121 GEVLPPHEPGVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPET 180

Query: 181 LSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVV 240
           LSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEV+
Sbjct: 181 LSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVI 240

Query: 241 STPYFPSSMERKQRQGKE-GENGVLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLM 300
           STPYFPSSMERKQRQGKE GEN VLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLM
Sbjct: 241 STPYFPSSMERKQRQGKEEGENEVLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLM 300

Query: 301 VGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPPPAPTE 355
           VGVLK VGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPP PAP+E
Sbjct: 301 VGVLKVVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPLPAPSE 356

[Close]

BLAST of Csor.00g054930 vs. ExPASy TrEMBL
Match: A0A6J1GY72 (tRNA pseudouridine synthase OS=Cucurbita moschata OX=3662 GN=LOC111458281 PE=3 SV=1)

HSP 1 Score: 713 bits (1841), Expect = 1.20e-259
Identity = 354/356 (99.44%), Postives = 354/356 (99.44%), Query Frame = 0


Query: 1   MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLPGDKEEAESMNRNPGIQRYLVAVEYIGTR 60
           MTENQKHRLEFSSDSSPQRPLKIGKTTNEDL GDKEEAESMNRNPGIQRYLVAVEYIGTR
Sbjct: 1   MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLLGDKEEAESMNRNPGIQRYLVAVEYIGTR 60

Query: 61  FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSNVCHVDVERISKRKP 120
           FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSNVCHVDVERISKRKP
Sbjct: 61  FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSNVCHVDVERISKRKP 120

Query: 121 GEVLPPHEPSVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPET 180
           GEVLPPHEPSVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPET
Sbjct: 121 GEVLPPHEPSVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPET 180

Query: 181 LSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVV 240
           LSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVV
Sbjct: 181 LSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVV 240

Query: 241 STPYFPSSMERKQRQGKE-GENGVLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLM 300
           STPYFPSSMERKQRQGKE GENGVLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLM
Sbjct: 241 STPYFPSSMERKQRQGKEEGENGVLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLM 300

Query: 301 VGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPPPAPTE 355
           VGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPPPAPTE
Sbjct: 301 VGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPPPAPTE 356

[Close]

BLAST of Csor.00g054930 vs. ExPASy TrEMBL
Match: A0A6J1KFZ8 (tRNA pseudouridine synthase OS=Cucurbita maxima OX=3661 GN=LOC111492882 PE=3 SV=1)

HSP 1 Score: 705 bits (1820), Expect = 1.91e-256
Identity = 349/356 (98.03%), Postives = 351/356 (98.60%), Query Frame = 0


Query: 1   MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLPGDKEEAESMNRNPGIQRYLVAVEYIGTR 60
           MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLPGDKEEAESMNRNPGIQRYLVAVEYIGTR
Sbjct: 1   MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLPGDKEEAESMNRNPGIQRYLVAVEYIGTR 60

Query: 61  FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSNVCHVDVERISKRKP 120
           FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSNVCHVDVERISKRKP
Sbjct: 61  FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSNVCHVDVERISKRKP 120

Query: 121 GEVLPPHEPSVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPET 180
           GEVLPPHEP VVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPET
Sbjct: 121 GEVLPPHEPGVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPET 180

Query: 181 LSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVV 240
           LSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEV+
Sbjct: 181 LSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVI 240

Query: 241 STPYFPSSMERKQRQGKE-GENGVLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLM 300
           STPYFPSSMERKQRQGKE GEN VLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLM
Sbjct: 241 STPYFPSSMERKQRQGKEEGENEVLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLM 300

Query: 301 VGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPPPAPTE 355
           VGVLK VGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPP PAP+E
Sbjct: 301 VGVLKVVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPLPAPSE 356

[Close]

BLAST of Csor.00g054930 vs. ExPASy TrEMBL
Match: A0A5D3CZZ6 (tRNA pseudouridine synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002730 PE=3 SV=1)

HSP 1 Score: 630 bits (1624), Expect = 1.22e-226
Identity = 312/351 (88.89%), Postives = 326/351 (92.88%), Query Frame = 0


Query: 1   MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLPGDKEEAESMNRNPGIQRYLVAVEYIGTR 60
           MTENQKH LE S DSS QRPLKIGKTT++   GD+EEAE+MN  PGIQRYLVAVEYIGTR
Sbjct: 1   MTENQKHGLELSIDSSSQRPLKIGKTTDQVFHGDEEEAETMNPKPGIQRYLVAVEYIGTR 60

Query: 61  FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSNVCHVDVERISKRKP 120
           FSGSQQQPNCRTVVG LEEAF+KFIGQ VSVFCSSRTDAGVHALSNVCHVDVERISKRKP
Sbjct: 61  FSGSQQQPNCRTVVGALEEAFQKFIGQPVSVFCSSRTDAGVHALSNVCHVDVERISKRKP 120

Query: 121 GEVLPPHEPSVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPET 180
           GEVLPPHEP VV +AVNHFLQK++GDVTVVDVRSVPND+HARYKAQERTYFYRLVSGPE 
Sbjct: 121 GEVLPPHEPGVVHKAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEA 180

Query: 181 LSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVV 240
           LSSF+KDR WHVPE LNIGAMQEACKVLVGHHDFSSFRAAGCQANSP+RTLDEL+VCEV 
Sbjct: 181 LSSFEKDRAWHVPETLNIGAMQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELNVCEVA 240

Query: 241 STPYFPSSMERKQRQGKE-GENGVLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLM 300
           STPYFP+SMERKQRQGKE  EN   HSE+ EVGFGIRRRHRCFVVTARARSFLYHQVRLM
Sbjct: 241 STPYFPTSMERKQRQGKEESENEEPHSETCEVGFGIRRRHRCFVVTARARSFLYHQVRLM 300

Query: 301 VGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPP 350
           VGVLKAVGTGDLTVGDVERILEAKNVSSA PMAPACGLYLGHVKYDLPP P
Sbjct: 301 VGVLKAVGTGDLTVGDVERILEAKNVSSARPMAPACGLYLGHVKYDLPPAP 351

[Close]

BLAST of Csor.00g054930 vs. ExPASy TrEMBL
Match: A0A1S3BDG9 (tRNA pseudouridine synthase OS=Cucumis melo OX=3656 GN=LOC103488841 PE=3 SV=1)

HSP 1 Score: 630 bits (1624), Expect = 1.22e-226
Identity = 312/351 (88.89%), Postives = 326/351 (92.88%), Query Frame = 0


Query: 1   MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLPGDKEEAESMNRNPGIQRYLVAVEYIGTR 60
           MTENQKH LE S DSS QRPLKIGKTT++   GD+EEAE+MN  PGIQRYLVAVEYIGTR
Sbjct: 1   MTENQKHGLELSIDSSSQRPLKIGKTTDQVFHGDEEEAETMNPKPGIQRYLVAVEYIGTR 60

Query: 61  FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSNVCHVDVERISKRKP 120
           FSGSQQQPNCRTVVG LEEAF+KFIGQ VSVFCSSRTDAGVHALSNVCHVDVERISKRKP
Sbjct: 61  FSGSQQQPNCRTVVGALEEAFQKFIGQPVSVFCSSRTDAGVHALSNVCHVDVERISKRKP 120

Query: 121 GEVLPPHEPSVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPET 180
           GEVLPPHEP VV +AVNHFLQK++GDVTVVDVRSVPND+HARYKAQERTYFYRLVSGPE 
Sbjct: 121 GEVLPPHEPGVVHKAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEA 180

Query: 181 LSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVV 240
           LSSF+KDR WHVPE LNIGAMQEACKVLVGHHDFSSFRAAGCQANSP+RTLDEL+VCEV 
Sbjct: 181 LSSFEKDRAWHVPETLNIGAMQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELNVCEVA 240

Query: 241 STPYFPSSMERKQRQGKE-GENGVLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLM 300
           STPYFP+SMERKQRQGKE  EN   HSE+ EVGFGIRRRHRCFVVTARARSFLYHQVRLM
Sbjct: 241 STPYFPTSMERKQRQGKEESENEEPHSETCEVGFGIRRRHRCFVVTARARSFLYHQVRLM 300

Query: 301 VGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPP 350
           VGVLKAVGTGDLTVGDVERILEAKNVSSA PMAPACGLYLGHVKYDLPP P
Sbjct: 301 VGVLKAVGTGDLTVGDVERILEAKNVSSARPMAPACGLYLGHVKYDLPPAP 351

[Close]

BLAST of Csor.00g054930 vs. ExPASy TrEMBL
Match: A0A1S3BDY4 (tRNA pseudouridine synthase OS=Cucumis melo OX=3656 GN=LOC103488841 PE=3 SV=1)

HSP 1 Score: 624 bits (1608), Expect = 3.23e-224
Identity = 311/351 (88.60%), Postives = 325/351 (92.59%), Query Frame = 0


Query: 1   MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLPGDKEEAESMNRNPGIQRYLVAVEYIGTR 60
           MTENQKH LE S DSS QRPLKIGKTT++   GD+EEAE+MN  PGIQRYLVAVEYIGTR
Sbjct: 1   MTENQKHGLELSIDSSSQRPLKIGKTTDQVFHGDEEEAETMNPKPGIQRYLVAVEYIGTR 60

Query: 61  FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSNVCHVDVERISKRKP 120
           FSGSQQQPNCRTVVG LEEAF+KFIGQ VSVFCSSRTDAGVHALSNVCHVDVERISKRKP
Sbjct: 61  FSGSQQQPNCRTVVGALEEAFQKFIGQPVSVFCSSRTDAGVHALSNVCHVDVERISKRKP 120

Query: 121 GEVLPPHEPSVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPET 180
           GEVLPPHEP VV +AVNHFLQK++GDVTVVDVRSVPND+HARYKAQERTYFYRLVSGPE 
Sbjct: 121 GEVLPPHEPGVVHKAVNHFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEA 180

Query: 181 LSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVV 240
           LSSF+KDR WHVPE LNIGAMQEACKVLVGHHDFSSFRAAGCQANSP+RTLDEL+VCEV 
Sbjct: 181 LSSFEKDRAWHVPETLNIGAMQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELNVCEVA 240

Query: 241 STPYFPSSMERKQRQGKE-GENGVLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLM 300
           STPYFP+SMERKQRQGKE  EN   HSE+ EVGFGIRRRHRCFVVTARARSFLYHQVRLM
Sbjct: 241 STPYFPTSMERKQRQGKEESENEEPHSETCEVGFGIRRRHRCFVVTARARSFLYHQVRLM 300

Query: 301 VGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPP 350
           VGVLKAVGTGDLTVGD ERILEAKNVSSA PMAPACGLYLGHVKYDLPP P
Sbjct: 301 VGVLKAVGTGDLTVGD-ERILEAKNVSSARPMAPACGLYLGHVKYDLPPAP 350

[Close]

BLAST of Csor.00g054930 vs. TAIR 10
Match: AT1G09800.1 (Pseudouridine synthase family protein )

HSP 1 Score: 459.1 bits (1180), Expect = 3.1e-129
Identity = 239/372 (64.25%), Postives = 278/372 (74.73%), Query Frame = 0


Query: 1   MTENQKHRLE-FSSDSSPQRPLKIGKTTN-EDLPGDKEEA----ESMNR-NPGIQRYLVA 60
           M++N KH L+  +S+ S +R  K+ +     D   ++++     ESMN  NP +QRYLVA
Sbjct: 1   MSDNLKHPLDCTASEESLERLSKVARIEGFSDEESEEQQGLADLESMNPVNPRVQRYLVA 60

Query: 61  VEYIGTRFSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTDAGVHALSNVCHVDVE 120
           +EYIGTRFSGSQQQ   RTVVGVL+EAF KFIGQ V +FCSSRTDAGVHALSNVCHVDVE
Sbjct: 61  IEYIGTRFSGSQQQAKDRTVVGVLQEAFHKFIGQPVKIFCSSRTDAGVHALSNVCHVDVE 120

Query: 121 RISKRKPGEVLPPHEPSVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYR 180
           RISKRKPGEVLPPHEP VV+RAVNHFLQ+ DGDV V+DVR VP++YHARYKAQERTYFYR
Sbjct: 121 RISKRKPGEVLPPHEPGVVQRAVNHFLQRKDGDVMVIDVRCVPSNYHARYKAQERTYFYR 180

Query: 181 LVSGPETLSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDE 240
           L+SG + LS  +KDR WHVPE LN+  MQEAC+VLVG HDFSSFRAAGCQA SPMR+LDE
Sbjct: 181 LLSGSDPLSILEKDRCWHVPEELNLRFMQEACRVLVGSHDFSSFRAAGCQAKSPMRSLDE 240

Query: 241 LDVCEVVSTPYFPSSMER------------------KQRQGKEGENGVLHSESYEVGFGI 300
           L++ EV STPYFPS  ER                   +  G     G +   +    FG 
Sbjct: 241 LNITEVPSTPYFPSITERTLSNLNNGDPLACSNQPKSETAGVTTNVGEVEGSTEGDSFGR 300

Query: 301 RRRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPAC 348
           RRRHRC+VVTAR+R FLYHQVRL+VG LK VGTG+LTV DVERILEAK VS+A PMAPA 
Sbjct: 301 RRRHRCYVVTARSRGFLYHQVRLIVGALKCVGTGELTVSDVERILEAKTVSAAKPMAPAS 360

[Close]

BLAST of Csor.00g054930 vs. TAIR 10
Match: AT1G34150.1 (Pseudouridine synthase family protein )

HSP 1 Score: 62.4 bits (150), Expect = 8.5e-10
Identity = 80/330 (24.24%), Postives = 124/330 (37.58%), Query Frame = 0


Query: 6   KHRLEFSSDSSPQRPLKIGKTTNEDLPGDKEEAESMNRNPGIQRYL-VAVEYIGTRFSG- 65
           KH    S  SS  R  ++ K       GDK    S   +   +RY+ + + Y G RF G 
Sbjct: 57  KHDRSLSDSSSLVRRRRVRK-------GDKNSIPSHLIS---KRYVALKIMYFGKRFYGF 116

Query: 66  ---SQQQPNCRTVVGVLEEAFRKFIGQSVSVFCS--SRTDAGVHALSNVCHVDVERISKR 125
              +Q +P+  + V    E  R  +G       S   RTD GV +   V  + +    K 
Sbjct: 117 SAEAQMEPSIESEVFKALERTRLLVGDKKDSCYSRCGRTDKGVSSTGQVIALFLRSRLKS 176

Query: 126 KPGEVLPPHEPSVVRRAVNHFLQKND----GDVTVVDVRSVPNDYHARYKAQERTYFYRL 185
            PG+           R    +++  +     D+ V+     P D+HAR+    R Y Y  
Sbjct: 177 PPGDSKAQVNGRTGERPEYDYVRVLNRALPDDIRVIGWSPAPIDFHARFSCYAREYKYFF 236

Query: 186 VSGPETLSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDEL 245
                          W   + LN+ AM  A K  +G HDF +F    C+       +D  
Sbjct: 237 ---------------WR--QNLNLSAMDFAGKKFIGEHDFRNF----CK-------MDVA 296

Query: 246 DV-CEVVSTPYFPSSMERKQRQGKEGENGVLHSESYEVGFGIRRRHRCFVVTARARSFLY 305
           +V C      +F  S  +   +G +                          T R  +FL+
Sbjct: 297 NVHCYTRRVTFFEVSPCQNSHEGDQ----------------------LCTFTMRGSAFLW 326

Query: 306 HQVRLMVGVLKAVGTGDLTVGDVERILEAK 324
           HQ+R MV VL  +G G  +V  ++ +L+ K
Sbjct: 357 HQIRCMVAVLFMIGQGVESVDVIDTLLDTK 326

[Close]

BLAST of Csor.00g054930 vs. TAIR 10
Match: AT5G35400.1 (Pseudouridine synthase family protein )

HSP 1 Score: 60.5 bits (145), Expect = 3.2e-09
Identity = 76/337 (22.55%), Postives = 124/337 (36.80%), Query Frame = 0


Query: 50  YLVAVEYIGTRFSGSQQQPNCRTVVGVLEEAFRKFIGQSVS-------------VFCSSR 109
           + + + Y G  F G Q+QP+  TV GV+E++   F+ +  +             V  + R
Sbjct: 95  FKIVLSYNGASFDGWQKQPDLHTVQGVVEKSLGGFVDERKAQLLKKKCKPLEGRVLVAGR 154

Query: 110 TDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAVNHFLQKNDGDVTVVDVRSVP 169
           TD GV AL+ VC     R             EP  +  A+N   +   G + VV +  V 
Sbjct: 155 TDKGVSALNQVCSFYTWR----------KDIEPIAIEDAIN---KDASGKLRVVSISKVS 214

Query: 170 NDYHARYKAQERTYFYRL-VSGPETLSS---------FDKDR----------------VW 229
             +H  + A+ R Y Y   +   E L           FD+++                + 
Sbjct: 215 RSFHPNFSAKWRRYLYIFPLDDAEPLRKSGENHENFIFDENKKKQRNGLLSEEIAEEVIM 274

Query: 230 HVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVVSTPYFPSSME 289
              + L I     A +V+    DFS         +   + L  L   +V+S   F    +
Sbjct: 275 SEDDELEIEETSNALEVVEKPSDFS--------VSKVDQLLQHLQ-GKVLSYKMFARDTK 334

Query: 290 RKQRQGKEGENGVLHSESYEVGFGIR---RRHRCFVVTARARSFLYHQVRLMVGVLKAVG 345
             + +G   E  + H+ + E+           R   V   A  FL   VR++V       
Sbjct: 335 AARNEGPPTECFMYHARAAEIRLSSSDCVEGRRVMCVELVANRFLRKMVRVLVATSIREA 394

[Close]

BLAST of Csor.00g054930 vs. TAIR 10
Match: AT5G35400.2 (Pseudouridine synthase family protein )

HSP 1 Score: 54.7 bits (130), Expect = 1.8e-07
Identity = 37/136 (27.21%), Postives = 58/136 (42.65%), Query Frame = 0


Query: 50  YLVAVEYIGTRFSGSQQQPNCRTVVGVLEEAFRKFIGQSVS-------------VFCSSR 109
           + + + Y G  F G Q+QP+  TV GV+E++   F+ +  +             V  + R
Sbjct: 95  FKIVLSYNGASFDGWQKQPDLHTVQGVVEKSLGGFVDERKAQLLKKKCKPLEGRVLVAGR 154

Query: 110 TDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAVNHFLQKNDGDVTVVDVRSVP 169
           TD GV AL+ VC     R             EP  +  A+N   +   G + VV +  V 
Sbjct: 155 TDKGVSALNQVCSFYTWR----------KDIEPIAIEDAIN---KDASGKLRVVSISKVS 214

Query: 170 NDYHARYKAQERTYFY 173
             +H  + A+ R Y Y
Sbjct: 215 RSFHPNFSAKWRRYLY 217

The following BLAST results are available for this feature:

BLAST of Csor.00g054930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A7IKI9	1.2e-45	38.85	tRNA pseudouridine synthase A OS=Xanthobacter autotrophicus (strain ATCC BAA-115...	[more]
B6IPI0	2.1e-45	39.60	tRNA pseudouridine synthase A OS=Rhodospirillum centenum (strain ATCC 51521 / SW...	[more]
Q2WAT0	2.7e-45	38.56	tRNA pseudouridine synthase A OS=Magnetospirillum magneticum (strain AMB-1 / ATC...	[more]
A9ILJ7	1.0e-44	35.33	tRNA pseudouridine synthase A OS=Bartonella tribocorum (strain CIP 105476 / IBS ...	[more]
A7HPQ3	1.4e-44	37.37	tRNA pseudouridine synthase A OS=Parvibaculum lavamentivorans (strain DS-1 / DSM...	[more]

BLAST of Csor.00g054930 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6601629.1	1.06e-262	100.00	hypothetical protein SDJN03_06862, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022956590.1	2.48e-259	99.44	uncharacterized protein LOC111458281 [Cucurbita moschata]	[more]
KAG7032390.1	2.01e-258	98.06	truA, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023524389.1	1.38e-256	98.60	uncharacterized protein LOC111788293 [Cucurbita pepo subsp. pepo]	[more]
XP_022998153.1	3.94e-256	98.03	uncharacterized protein LOC111492882 [Cucurbita maxima]	[more]

BLAST of Csor.00g054930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GY72	1.20e-259	99.44	tRNA pseudouridine synthase OS=Cucurbita moschata OX=3662 GN=LOC111458281 PE=3 S...	[more]
A0A6J1KFZ8	1.91e-256	98.03	tRNA pseudouridine synthase OS=Cucurbita maxima OX=3661 GN=LOC111492882 PE=3 SV=...	[more]
A0A5D3CZZ6	1.22e-226	88.89	tRNA pseudouridine synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3BDG9	1.22e-226	88.89	tRNA pseudouridine synthase OS=Cucumis melo OX=3656 GN=LOC103488841 PE=3 SV=1	[more]
A0A1S3BDY4	3.23e-224	88.60	tRNA pseudouridine synthase OS=Cucumis melo OX=3656 GN=LOC103488841 PE=3 SV=1	[more]

BLAST of Csor.00g054930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09800.1	3.1e-129	64.25	Pseudouridine synthase family protein	[more]
AT1G34150.1	8.5e-10	24.24	Pseudouridine synthase family protein	[more]
AT5G35400.1	3.2e-09	22.55	Pseudouridine synthase family protein	[more]
AT5G35400.2	1.8e-07	27.21	Pseudouridine synthase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020095	Pseudouridine synthase I, TruA, C-terminal	GENE3D	3.30.70.660		coord: 167..346 e-value: 1.8E-39 score: 136.7
IPR020097	Pseudouridine synthase I, TruA, alpha/beta domain	PFAM	PF01416	PseudoU_synth_1	coord: 53..163 e-value: 1.9E-8 score: 34.7 coord: 204..345 e-value: 5.8E-31 score: 107.2
IPR020094	Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal	GENE3D	3.30.70.580		coord: 45..165 e-value: 5.5E-28 score: 99.3
None	No IPR available	PIRSR	PIRSR001430-2	PIRSR001430-2	coord: 87..236 e-value: 8.0E-34 score: 115.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	PANTHER	PTHR11142:SF0	TRNA PSEUDOURIDINE SYNTHASE-LIKE 1	coord: 33..345
IPR001406	Pseudouridine synthase I, TruA	PANTHER	PTHR11142	PSEUDOURIDYLATE SYNTHASE	coord: 33..345
IPR001406	Pseudouridine synthase I, TruA	HAMAP	MF_00171	TruA	coord: 48..344 score: 29.679564
IPR001406	Pseudouridine synthase I, TruA	CDD	cd02570	PseudoU_synth_EcTruA	coord: 54..344 e-value: 8.80056E-106 score: 308.248
IPR020103	Pseudouridine synthase, catalytic domain superfamily	SUPERFAMILY	55120	Pseudouridine synthase	coord: 47..345

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g054930.m01	Csor.00g054930.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031119	tRNA pseudouridine synthesis
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0009451	RNA modification
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0106029	tRNA pseudouridine synthase activity
molecular_function	GO:0009982	pseudouridine synthase activity