Csor.00g054450 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g054450
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	2-iminobutanoate/2-iminopropanoate deaminase-like
Location	Csor_Chr16: 5273805 .. 5275251 (+)
RNA-Seq Expression	Csor.00g054450
Synteny	Csor.00g054450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTACTGCACGTCTCACACCTTCCAAATTCCGGCCTCCAACGTCATTTCACGGCCGCGCACTGTCACTCCCTCTGTCGGCGCCGCCGTGTCCTTGTGGCGCCGCCCTTCATCTATTCCATCTATTTCAAACCGCAACATGTCCTTCAAATGCCACGCCATTTCCAAGTGTAATGGTACTACGCTCTCACTTACATCGATATGTTTTTAAAATTTTTCGTTTTTTGAAACGGGATTTTCGATCTTTTGATTAGATTAGAGATATATAACTTTTTTTAATAGTCGAATTATGTTGATATTAACAATTGACATTTTTCAACAATGGTCCTTCCAAGTCTACTTTTGCAATTTGTAGTTTCTAAAAGCTTTGAATCTCATTTCAACACTTAACTACATAAATGCGGACACAATCATTACAATTCCTTAATCAAGTCTAATGTTCAATTTGAGGATAAAAATTGACCCTATAATAAATTTAAAATCTAAGAGTAAAAATTGATTTTTTCCTCCCAAACATTTTTCTATCATTATATCAATGGTCATCAACATTTTCTGTGACAGATATCACACCTATTATAACCGAAGAGGCTCCAGAAGCATTAGGGCCATATTCTCAAGGCATCATAGCCAACAACTTTATATTTGTGTCTGGCTCCCTAGGTCTTATTCCCGAGGTAGCTTCATCATTTTATGATTTTATTTATTGTTACGTTCTACTTTACGTGTAGATTATGTGAATTTTTTAAATGTCTAATCCAACATAACTCAAGTGTTTAGGTCTACTTACATGTATTTGTAGATTCGTAGTTTCGAATTTCGTGTATGTGTATGCACTTTCTATGAGGTCTAATTGAGTGTGTATGTTTATGATTTAATACAGACAGGAGAATTAATTTCCGATCATGTTGGAGACCAAACTGTGCAGGTATTATTTGTTTATTTTTTTCATTAGATCTTGTTGTGCTTTGTAGACCCAAAAGTTTTATAAAAAAAAAATGTTAGAAAATGAAATGAAATATGATTACGCAGGCCCTCAAAAATATAGGTGCAATATTGAAAGCCGGAGGTGCGGACTATAATAGAGTGGTTAAGACAACTATTATGTATGAAAATCTTTTTCGTATATTTTGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCTTGAAACCTACATTTTTACAACAATTCTTTGTTGCAGGCTGGCTGATGTAGCAGACTTTGCATTAGTGAATGAAATTTATGCTCGATGTAAGTTCTTTTCTTTCTTTTTTTTGTAATTTTTTTAGTGAAGAAAATGAAACTGAGAGGAGTTCTTGGTCTTTTTTACAGACTTTTCTGAGCAACCTTTTCCAGCTCGGTCAACATTTCAGGTTGGAGCGTTGCCCAAAAATGCCAAGATTGAAATCGATGCAATAGCTTTGGTTTAA

mRNA sequence

ATGGCTTACTGCACGTCTCACACCTTCCAAATTCCGGCCTCCAACGTCATTTCACGGCCGCGCACTGTCACTCCCTCTGTCGGCGCCGCCGTGTCCTTGTGGCGCCGCCCTTCATCTATTCCATCTATTTCAAACCGCAACATGTCCTTCAAATGCCACGCCATTTCCAAGTGTAATGATATCACACCTATTATAACCGAAGAGGCTCCAGAAGCATTAGGGCCATATTCTCAAGGCATCATAGCCAACAACTTTATATTTGTGTCTGGCTCCCTAGGTCTTATTCCCGAGACAGGAGAATTAATTTCCGATCATGTTGGAGACCAAACTGTGCAGGCCCTCAAAAATATAGGTGCAATATTGAAAGCCGGAGGTGCGGACTATAATAGAGTGGTTAAGACAACTATTATGCTGGCTGATGTAGCAGACTTTGCATTAGTGAATGAAATTTATGCTCGATACTTTTCTGAGCAACCTTTTCCAGCTCGGTCAACATTTCAGGTTGGAGCGTTGCCCAAAAATGCCAAGATTGAAATCGATGCAATAGCTTTGGTTTAA

Coding sequence (CDS)

ATGGCTTACTGCACGTCTCACACCTTCCAAATTCCGGCCTCCAACGTCATTTCACGGCCGCGCACTGTCACTCCCTCTGTCGGCGCCGCCGTGTCCTTGTGGCGCCGCCCTTCATCTATTCCATCTATTTCAAACCGCAACATGTCCTTCAAATGCCACGCCATTTCCAAGTGTAATGATATCACACCTATTATAACCGAAGAGGCTCCAGAAGCATTAGGGCCATATTCTCAAGGCATCATAGCCAACAACTTTATATTTGTGTCTGGCTCCCTAGGTCTTATTCCCGAGACAGGAGAATTAATTTCCGATCATGTTGGAGACCAAACTGTGCAGGCCCTCAAAAATATAGGTGCAATATTGAAAGCCGGAGGTGCGGACTATAATAGAGTGGTTAAGACAACTATTATGCTGGCTGATGTAGCAGACTTTGCATTAGTGAATGAAATTTATGCTCGATACTTTTCTGAGCAACCTTTTCCAGCTCGGTCAACATTTCAGGTTGGAGCGTTGCCCAAAAATGCCAAGATTGAAATCGATGCAATAGCTTTGGTTTAA

Protein sequence

MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCNDITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIALV

Homology

[Close]

BLAST of Csor.00g054450 vs. ExPASy Swiss-Prot
Match: Q94JQ4 (Reactive Intermediate Deaminase A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RIDA PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.2e-41
Identity = 93/155 (60.00%), Postives = 112/155 (72.26%), Query Frame = 0


Query: 29  AAVSLWRRPSSIPSISNRNMSFKCHAISKCNDITPIITEEAPEALGPYSQGIIANNFIFV 88
           A VSL+R  S  P  +  ++S    ++ K      + TE+AP ALGPYSQ I ANN +F+
Sbjct: 38  AGVSLFRMSSRSPPFA--SLSVSASSVKK----EVVSTEKAPAALGPYSQAIKANNLVFL 97

Query: 89  SGSLGLIPETGELISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVN 148
           SG LGLIPETG+ +S+ V DQT Q LKN+G ILKA GADY+ VVKTTIMLAD+ADF  VN
Sbjct: 98  SGVLGLIPETGKFVSESVEDQTEQVLKNMGEILKASGADYSSVVKTTIMLADLADFKTVN 157

Query: 149 EIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIA 184
           EIYA+YF   P PARST+QV ALP NAKIEI+ IA
Sbjct: 158 EIYAKYF-PAPSPARSTYQVAALPLNAKIEIECIA 185

[Close]

BLAST of Csor.00g054450 vs. ExPASy Swiss-Prot
Match: Q10121 (RutC family protein C23G10.2 OS=Caenorhabditis elegans OX=6239 GN=C23G10.2 PE=3 SV=3)

HSP 1 Score: 138.7 bits (348), Expect = 6.9e-32
Identity = 67/121 (55.37%), Postives = 93/121 (76.86%), Query Frame = 0


Query: 64  IITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAILKA 123
           I +  AP A+GPYSQ + A N I++SGSLGL P+TG+L  + V +QT Q+LKN+G +LKA
Sbjct: 44  ISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDL-KEGVVEQTHQSLKNLGEVLKA 103

Query: 124 GGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIA 183
            GADY  VVKTT++L ++ADFA VNE+Y +YF + P+PAR+ +QV ALPK   +EI+A+A
Sbjct: 104 AGADYGNVVKTTVLLQNIADFAAVNEVYGQYF-KSPYPARAAYQVAALPKGGLVEIEAVA 162

Query: 184 L 185
           +
Sbjct: 164 I 162

[Close]

BLAST of Csor.00g054450 vs. ExPASy Swiss-Prot
Match: P52758 (2-iminobutanoate/2-iminopropanoate deaminase OS=Homo sapiens OX=9606 GN=RIDA PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.0e-31
Identity = 63/121 (52.07%), Postives = 90/121 (74.38%), Query Frame = 0


Query: 64  IITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAILKA 123
           I T +AP A+GPYSQ ++ +  I++SG +G+ P +G+L+S  V ++  QALKN+G ILKA
Sbjct: 9   ISTAKAPGAIGPYSQAVLVDRTIYISGQIGMDPSSGQLVSGGVAEEAKQALKNMGEILKA 68

Query: 124 GGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIA 183
            G D+  VVKTT++LAD+ DF  VNEIY +YF    FPAR+ +QV ALPK ++IEI+A+A
Sbjct: 69  AGCDFTNVVKTTVLLADINDFNTVNEIYKQYFKSN-FPARAAYQVAALPKGSRIEIEAVA 128

Query: 184 L 185
           +
Sbjct: 129 I 128

[Close]

BLAST of Csor.00g054450 vs. ExPASy Swiss-Prot
Match: Q3T114 (2-iminobutanoate/2-iminopropanoate deaminase OS=Bos taurus OX=9913 GN=RIDA PE=2 SV=3)

HSP 1 Score: 132.1 bits (331), Expect = 6.4e-30
Identity = 60/121 (49.59%), Postives = 88/121 (72.73%), Query Frame = 0


Query: 64  IITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAILKA 123
           I T +AP A+GPYSQ ++ +  I++SG LG+ P +G+L+   V ++  QAL NIG ILKA
Sbjct: 9   ISTAKAPAAIGPYSQAVLVDRTIYISGQLGMDPASGQLVPGGVAEEAKQALTNIGEILKA 68

Query: 124 GGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIA 183
            G D+  VVK T++LAD+ DF+ VN++Y +YF +  FPAR+ +QV ALPK  ++EI+AIA
Sbjct: 69  AGCDFTNVVKATVLLADINDFSTVNDVYKQYF-QSSFPARAAYQVAALPKGGRVEIEAIA 128

Query: 184 L 185
           +
Sbjct: 129 V 128

[Close]

BLAST of Csor.00g054450 vs. ExPASy Swiss-Prot
Match: P80601 (2-iminobutanoate/2-iminopropanoate deaminase OS=Capra hircus OX=9925 GN=RIDA PE=1 SV=3)

HSP 1 Score: 131.0 bits (328), Expect = 1.4e-29
Identity = 60/121 (49.59%), Postives = 88/121 (72.73%), Query Frame = 0


Query: 64  IITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAILKA 123
           I T +AP A+GPYSQ ++ +  I++SG LG+ P +G+L+   V ++  QAL NIG ILKA
Sbjct: 9   ISTAKAPAAIGPYSQAVLVDRTIYISGQLGMDPASGQLVPGGVVEEAKQALTNIGEILKA 68

Query: 124 GGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIA 183
            G D+  VVK T++LAD+ DF+ VN++Y +YF +  FPAR+ +QV ALPK  ++EI+AIA
Sbjct: 69  AGCDFTNVVKATVLLADINDFSAVNDVYKQYF-QSSFPARAAYQVAALPKGGRVEIEAIA 128

Query: 184 L 185
           +
Sbjct: 129 V 128

[Close]

BLAST of Csor.00g054450 vs. NCBI nr
Match: KAG6577420.1 (Reactive Intermediate Deaminase A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 367 bits (941), Expect = 7.59e-128
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCND 60
           MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCND
Sbjct: 1   MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCND 60

Query: 61  ITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAI 120
           ITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAI
Sbjct: 61  ITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAI 120

Query: 121 LKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEID 180
           LKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEID
Sbjct: 121 LKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEID 180

Query: 181 AIALV 185
           AIALV
Sbjct: 181 AIALV 185

[Close]

BLAST of Csor.00g054450 vs. NCBI nr
Match: XP_022932153.1 (2-iminobutanoate/2-iminopropanoate deaminase-like [Cucurbita moschata])

HSP 1 Score: 365 bits (937), Expect = 3.09e-127
Identity = 184/185 (99.46%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCND 60
           MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCND
Sbjct: 1   MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCND 60

Query: 61  ITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAI 120
           ITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAI
Sbjct: 61  ITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAI 120

Query: 121 LKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEID 180
           LKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSE+PFPARSTFQVGALPKNAKIEID
Sbjct: 121 LKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQVGALPKNAKIEID 180

Query: 181 AIALV 185
           AIALV
Sbjct: 181 AIALV 185

[Close]

BLAST of Csor.00g054450 vs. NCBI nr
Match: KAG7015494.1 (Reactive Intermediate Deaminase A, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 354 bits (908), Expect = 1.16e-122
Identity = 183/195 (93.85%), Postives = 184/195 (94.36%), Query Frame = 0


Query: 1   MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCND 60
           MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCND
Sbjct: 1   MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCND 60

Query: 61  ITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAI 120
           ITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAI
Sbjct: 61  ITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAI 120

Query: 121 LKAGGADYNRVVKTTIMLADVADFALVNEIYARY----------FSEQPFPARSTFQVGA 180
           LKAGGADYNRVVKTTIMLADVADFALVNEIYAR           FSE+PFPARSTFQVGA
Sbjct: 121 LKAGGADYNRVVKTTIMLADVADFALVNEIYARLKKMKLRGVLDFSEKPFPARSTFQVGA 180

Query: 181 LPKNAKIEIDAIALV 185
           LPKNAKIEIDAIALV
Sbjct: 181 LPKNAKIEIDAIALV 195

[Close]

BLAST of Csor.00g054450 vs. NCBI nr
Match: XP_023552960.1 (2-iminobutanoate/2-iminopropanoate deaminase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 347 bits (890), Expect = 4.54e-120
Identity = 174/185 (94.05%), Postives = 179/185 (96.76%), Query Frame = 0


Query: 1   MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCND 60
           MAYCT+HTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAIS+C+D
Sbjct: 1   MAYCTAHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISECDD 60

Query: 61  ITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAI 120
           ITPI TEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQT QALKNIGAI
Sbjct: 61  ITPIATEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTEQALKNIGAI 120

Query: 121 LKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEID 180
           LKAGG DYNRVVKTTIMLADVADFALVNEIYA+YFSE P PARSTFQ GALPKNAKIEID
Sbjct: 121 LKAGGVDYNRVVKTTIMLADVADFALVNEIYAKYFSEYPAPARSTFQAGALPKNAKIEID 180

Query: 181 AIALV 185
           AIA+V
Sbjct: 181 AIAVV 185

[Close]

BLAST of Csor.00g054450 vs. NCBI nr
Match: KAG6577421.1 (Reactive Intermediate Deaminase A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 342 bits (877), Expect = 4.35e-118
Identity = 170/185 (91.89%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 1   MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCND 60
           MAYC++++FQIPA+NVISRPRTVTPSVGA+VSLWRRPSSIPSISNRNMSFKCHAISKC D
Sbjct: 1   MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRD 60

Query: 61  ITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAI 120
           I PI T+EAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQT QAL+NIGAI
Sbjct: 61  IIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTEQALRNIGAI 120

Query: 121 LKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEID 180
           L+AGGADYNRVVKTTIMLADVADFALVNEIYARYFSE+PFPARSTFQ+GALPKNAKIEID
Sbjct: 121 LRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQIGALPKNAKIEID 180

Query: 181 AIALV 185
           AIALV
Sbjct: 181 AIALV 185

[Close]

BLAST of Csor.00g054450 vs. ExPASy TrEMBL
Match: A0A6J1F0U9 (2-iminobutanoate/2-iminopropanoate deaminase-like OS=Cucurbita moschata OX=3662 GN=LOC111438474 PE=3 SV=1)

HSP 1 Score: 365 bits (937), Expect = 1.50e-127
Identity = 184/185 (99.46%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCND 60
           MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCND
Sbjct: 1   MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCND 60

Query: 61  ITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAI 120
           ITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAI
Sbjct: 61  ITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAI 120

Query: 121 LKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEID 180
           LKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSE+PFPARSTFQVGALPKNAKIEID
Sbjct: 121 LKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQVGALPKNAKIEID 180

Query: 181 AIALV 185
           AIALV
Sbjct: 181 AIALV 185

[Close]

BLAST of Csor.00g054450 vs. ExPASy TrEMBL
Match: A0A6J1EVW2 (2-iminobutanoate/2-iminopropanoate deaminase-like OS=Cucurbita moschata OX=3662 GN=LOC111438479 PE=3 SV=1)

HSP 1 Score: 341 bits (875), Expect = 4.25e-118
Identity = 171/185 (92.43%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCND 60
           MAYC++++FQIPA+NVISRPRTVTPSVGA+VSLWRRPSSIPSISNRNMSFKCHAISKC D
Sbjct: 1   MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRD 60

Query: 61  ITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAI 120
           I PI T+EAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQ  QAL+NIGAI
Sbjct: 61  IIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQPRQALRNIGAI 120

Query: 121 LKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEID 180
           L+AGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEID
Sbjct: 121 LRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEID 180

Query: 181 AIALV 185
           AIALV
Sbjct: 181 AIALV 185

[Close]

BLAST of Csor.00g054450 vs. ExPASy TrEMBL
Match: A0A6J1JD57 (2-iminobutanoate/2-iminopropanoate deaminase-like OS=Cucurbita maxima OX=3661 GN=LOC111483310 PE=3 SV=1)

HSP 1 Score: 341 bits (874), Expect = 6.04e-118
Identity = 172/185 (92.97%), Postives = 177/185 (95.68%), Query Frame = 0


Query: 1   MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCND 60
           MAYCT+HTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKC+D
Sbjct: 1   MAYCTAHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCDD 60

Query: 61  ITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAI 120
           IT I T EAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVG+Q  QALKNIGAI
Sbjct: 61  ITTIETNEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGEQAEQALKNIGAI 120

Query: 121 LKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEID 180
           LKAGGADYNRVVKTTIMLADVADFALVN+IYARYFSE P PARSTFQ GALPKNAKIEID
Sbjct: 121 LKAGGADYNRVVKTTIMLADVADFALVNQIYARYFSEYPAPARSTFQAGALPKNAKIEID 180

Query: 181 AIALV 185
           AIA+V
Sbjct: 181 AIAVV 185

[Close]

BLAST of Csor.00g054450 vs. ExPASy TrEMBL
Match: A0RZC7 (Plastid-lipid associated protein OS=Cucumis sativus OX=3659 GN=CHRD PE=2 SV=1)

HSP 1 Score: 272 bits (696), Expect = 8.59e-91
Identity = 138/186 (74.19%), Postives = 157/186 (84.41%), Query Frame = 0


Query: 1   MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPS-SIPSISNRNMSFKCHAISKCN 60
           MA   +HT QIPAS  I+R R++TPS G AVSLWRRPS +IPSIS+  MSFKCHAISKC 
Sbjct: 1   MAMSAAHTLQIPASTAITRRRSITPSAGTAVSLWRRPSPAIPSISSHQMSFKCHAISKCT 60

Query: 61  -DITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIG 120
            +I  I T+ APEALGPYSQGIIANN ++VSGSLGLIPETG+LISD VG+QT QALKN+G
Sbjct: 61  TEIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVG 120

Query: 121 AILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIE 180
           AIL+AGGADY+RV+KTTIMLA+VADF LVNEIY +YF   P PARSTF  GALPKNAKIE
Sbjct: 121 AILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNSPAPARSTFAAGALPKNAKIE 180

Query: 181 IDAIAL 184
           IDAIA+
Sbjct: 181 IDAIAV 186

[Close]

BLAST of Csor.00g054450 vs. ExPASy TrEMBL
Match: A0A0A0L6A5 (Plastid-lipid associated protein OS=Cucumis sativus OX=3659 GN=Csa_3G076580 PE=3 SV=1)

HSP 1 Score: 271 bits (692), Expect = 3.49e-90
Identity = 138/186 (74.19%), Postives = 157/186 (84.41%), Query Frame = 0


Query: 1   MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPS-SIPSISNRNMSFKCHAISKCN 60
           MA   +HT QIPAS  I+R R++TPS   AVSLWRRPS +IPSIS+R MSFKCHAISKC 
Sbjct: 1   MAMSAAHTLQIPASTAITRRRSITPSASTAVSLWRRPSPAIPSISSRQMSFKCHAISKCT 60

Query: 61  -DITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIG 120
            +I  I T+ APEALGPYSQGIIANN ++VSGSLGLIPETG+LISD VG+QT QALKN+G
Sbjct: 61  TEIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVG 120

Query: 121 AILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIE 180
           AIL+AGGADY+RV+KTTIMLA+VADF LVNEIY +YF   P PARSTF  GALPKNAKIE
Sbjct: 121 AILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNCPAPARSTFAAGALPKNAKIE 180

Query: 181 IDAIAL 184
           IDAIA+
Sbjct: 181 IDAIAV 186

[Close]

BLAST of Csor.00g054450 vs. TAIR 10
Match: AT3G20390.1 (endoribonuclease L-PSP family protein )

HSP 1 Score: 168.7 bits (426), Expect = 4.4e-42
Identity = 93/155 (60.00%), Postives = 112/155 (72.26%), Query Frame = 0


Query: 29  AAVSLWRRPSSIPSISNRNMSFKCHAISKCNDITPIITEEAPEALGPYSQGIIANNFIFV 88
           A VSL+R  S  P  +  ++S    ++ K      + TE+AP ALGPYSQ I ANN +F+
Sbjct: 38  AGVSLFRMSSRSPPFA--SLSVSASSVKK----EVVSTEKAPAALGPYSQAIKANNLVFL 97

Query: 89  SGSLGLIPETGELISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVN 148
           SG LGLIPETG+ +S+ V DQT Q LKN+G ILKA GADY+ VVKTTIMLAD+ADF  VN
Sbjct: 98  SGVLGLIPETGKFVSESVEDQTEQVLKNMGEILKASGADYSSVVKTTIMLADLADFKTVN 157

Query: 149 EIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIA 184
           EIYA+YF   P PARST+QV ALP NAKIEI+ IA
Sbjct: 158 EIYAKYF-PAPSPARSTYQVAALPLNAKIEIECIA 185

The following BLAST results are available for this feature:

BLAST of Csor.00g054450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94JQ4	6.2e-41	60.00	Reactive Intermediate Deaminase A, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q10121	6.9e-32	55.37	RutC family protein C23G10.2 OS=Caenorhabditis elegans OX=6239 GN=C23G10.2 PE=3 ...	[more]
P52758	2.0e-31	52.07	2-iminobutanoate/2-iminopropanoate deaminase OS=Homo sapiens OX=9606 GN=RIDA PE=...	[more]
Q3T114	6.4e-30	49.59	2-iminobutanoate/2-iminopropanoate deaminase OS=Bos taurus OX=9913 GN=RIDA PE=2 ...	[more]
P80601	1.4e-29	49.59	2-iminobutanoate/2-iminopropanoate deaminase OS=Capra hircus OX=9925 GN=RIDA PE=...	[more]

BLAST of Csor.00g054450 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6577420.1	7.59e-128	100.00	Reactive Intermediate Deaminase A, chloroplastic, partial [Cucurbita argyrosperm...	[more]
XP_022932153.1	3.09e-127	99.46	2-iminobutanoate/2-iminopropanoate deaminase-like [Cucurbita moschata]	[more]
KAG7015494.1	1.16e-122	93.85	Reactive Intermediate Deaminase A, chloroplastic [Cucurbita argyrosperma subsp. ...	[more]
XP_023552960.1	4.54e-120	94.05	2-iminobutanoate/2-iminopropanoate deaminase-like [Cucurbita pepo subsp. pepo]	[more]
KAG6577421.1	4.35e-118	91.89	Reactive Intermediate Deaminase A, chloroplastic, partial [Cucurbita argyrosperm...	[more]

BLAST of Csor.00g054450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F0U9	1.50e-127	99.46	2-iminobutanoate/2-iminopropanoate deaminase-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1EVW2	4.25e-118	92.43	2-iminobutanoate/2-iminopropanoate deaminase-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1JD57	6.04e-118	92.97	2-iminobutanoate/2-iminopropanoate deaminase-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0RZC7	8.59e-91	74.19	Plastid-lipid associated protein OS=Cucumis sativus OX=3659 GN=CHRD PE=2 SV=1	[more]
A0A0A0L6A5	3.49e-90	74.19	Plastid-lipid associated protein OS=Cucumis sativus OX=3659 GN=Csa_3G076580 PE=3...	[more]

BLAST of Csor.00g054450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20390.1	4.4e-42	60.00	endoribonuclease L-PSP family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006175	YjgF/YER057c/UK114 family	PFAM	PF01042	Ribonuc_L-PSP	coord: 67..184 e-value: 2.7E-39 score: 133.9
IPR006175	YjgF/YER057c/UK114 family	PANTHER	PTHR11803	2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA	coord: 65..183
IPR035959	RutC-like superfamily	GENE3D	3.30.1330.40		coord: 62..185 e-value: 2.8E-44 score: 152.3
IPR035959	RutC-like superfamily	SUPERFAMILY	55298	YjgF-like	coord: 62..185
IPR006056	RidA family	TIGRFAM	TIGR00004	TIGR00004	coord: 63..184 e-value: 1.1E-46 score: 156.1
None	No IPR available	PANTHER	PTHR11803:SF51	BNAA05G36080D PROTEIN	coord: 65..183
None	No IPR available	CDD	cd00448	YjgF_YER057c_UK114_family	coord: 76..183 e-value: 5.0953E-45 score: 142.697
IPR019897	RidA, conserved site	PROSITE	PS01094	UPF0076	coord: 161..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g054450.m01	Csor.00g054450.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1901565	organonitrogen compound catabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0019239	deaminase activity