Csor.00g054390 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g054390
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	ribosomal protein L5
Location	Csor_Chr16: 4992534 .. 4993021 (-)
RNA-Seq Expression	Csor.00g054390
Synteny	Csor.00g054390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAATTTTTCGGTCAGAATCGCCACAGTAATGTCTCTCTTAGATTCTCCGGTCGAAATACGGGAAAACTCCATGCAATTCTCGATGGCAACAGAGTTTTGCTCATTCTCCCCGAAACTAGAAGATCATTTCGAGATCTTCGAACATATTATAGGGTTCAATGTAACTATTGTCACTTCAGCCAACACACAAGATGAGACTTTACCACCGTGGAACGGCTTTTTGCAAAAAGATGAGGGGGAAACTCAGTAAGAGGAGAAGCTAAATATACACGAGATCACAAACGTAGATTGCTCGCGGCTAAATATGAATTGAGACGAAAGCTTGATTTAGATAGAAAGCCTTTTGTAAAGATCCCACCCAATCTTACTAGTGATATGCGGGACAAAGATCGTGAGAAGTTGTCCAAGTTGACAAGAAAAGAGTTCCTTTGCACGAGTAAGAAACCTATGTATTTTCACGGGTCGCCCTCGTGGAGTAAATGA

mRNA sequence

ATGTCGAATTTTTCGGTCAGAATCGCCACAGTAATGTCTCTCTTAGATTCTCCGGTCGAAATACGGGAAAACTCCATGCAATTCTCGATGGCAACAGAGTTTTGCTCATTCTCCCCGAAACTAGAAGATCATTTCGAGATCTTCGAACATATTATAGGGTTCAATGTAACTATTGTCACTTCAGCCAACACACAAGATGAGACTTTACCACCGTGGAACGGCTTTTTGCAAAAAGATGAGGGGGAAACTCAAAAGCCTTTTGTAAAGATCCCACCCAATCTTACTAGTGATATGCGGGACAAAGATCGTGAGAAGTTGTCCAAGTTGACAAGAAAAGAGTTCCTTTGCACGAGTAAGAAACCTATGTATTTTCACGGGTCGCCCTCGTGGAGTAAATGA

Coding sequence (CDS)

ATGTCGAATTTTTCGGTCAGAATCGCCACAGTAATGTCTCTCTTAGATTCTCCGGTCGAAATACGGGAAAACTCCATGCAATTCTCGATGGCAACAGAGTTTTGCTCATTCTCCCCGAAACTAGAAGATCATTTCGAGATCTTCGAACATATTATAGGGTTCAATGTAACTATTGTCACTTCAGCCAACACACAAGATGAGACTTTACCACCGTGGAACGGCTTTTTGCAAAAAGATGAGGGGGAAACTCAAAAGCCTTTTGTAAAGATCCCACCCAATCTTACTAGTGATATGCGGGACAAAGATCGTGAGAAGTTGTCCAAGTTGACAAGAAAAGAGTTCCTTTGCACGAGTAAGAAACCTATGTATTTTCACGGGTCGCCCTCGTGGAGTAAATGA

Protein sequence

MSNFSVRIATVMSLLDSPVEIRENSMQFSMATEFCSFSPKLEDHFEIFEHIIGFNVTIVTSANTQDETLPPWNGFLQKDEGETQKPFVKIPPNLTSDMRDKDREKLSKLTRKEFLCTSKKPMYFHGSPSWSK

Homology

[Close]

BLAST of Csor.00g054390 vs. ExPASy Swiss-Prot
Match: P49388 (60S ribosomal protein L5, mitochondrial OS=Brassica napus OX=3708 GN=RPL5 PE=3 SV=2)

HSP 1 Score: 149.8 bits (377), Expect = 2.1e-35
Identity = 72/84 (85.71%), Postives = 79/84 (94.05%), Query Frame = 0


Query: 1   MSNFSVRIATVMSLLDSPVEIRENSMQFSMATEFCSFSPKLEDHFEIFEHIIGFNVTIVT 60
           MSNFSVRI+TVMSLLD PVEIR+NS+QFSM TEFC F+P+L+DHFEIFEHI GFNVTIVT
Sbjct: 102 MSNFSVRISTVMSLLDFPVEIRKNSIQFSMETEFCEFAPQLQDHFEIFEHIRGFNVTIVT 161

Query: 61  SANTQDETLPPWNGFLQKDEGETQ 85
           SANTQDETLP W+GFLQKDEGETQ
Sbjct: 162 SANTQDETLPLWSGFLQKDEGETQ 185

[Close]

BLAST of Csor.00g054390 vs. ExPASy Swiss-Prot
Match: P42793 (60S ribosomal protein L5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL5 PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 6.8e-34
Identity = 71/84 (84.52%), Postives = 76/84 (90.48%), Query Frame = 0


Query: 1   MSNFSVRIATVMSLLDSPVEIRENSMQFSMATEFCSFSPKLEDHFEIFEHIIGFNVTIVT 60
           MSNF VRI TVMSLLD PVEIR+NS+QFSM TEFC FSP+LEDHFEIFEHI GFNVTI+T
Sbjct: 102 MSNFLVRILTVMSLLDFPVEIRKNSIQFSMETEFCEFSPELEDHFEIFEHIRGFNVTIIT 161

Query: 61  SANTQDETLPPWNGFLQKDEGETQ 85
           SANTQDETL  W+GFLQKDEGETQ
Sbjct: 162 SANTQDETLLLWSGFLQKDEGETQ 185

[Close]

BLAST of Csor.00g054390 vs. ExPASy Swiss-Prot
Match: P51409 (60S ribosomal protein L5, mitochondrial OS=Solanum tuberosum OX=4113 GN=RPL5 PE=2 SV=2)

HSP 1 Score: 144.4 bits (363), Expect = 8.9e-34
Identity = 71/84 (84.52%), Postives = 77/84 (91.67%), Query Frame = 0


Query: 1   MSNFSVRIATVMSLLDSPVEIRENSMQFSMATEFCSFSPKLEDHFEIFEHIIGFNVTIVT 60
           MS+F VRI+TVMSLLDSP+EIRE S+QFSM TEFC FSP+LEDHFEIFEHI GFNVTIVT
Sbjct: 103 MSHFLVRISTVMSLLDSPLEIRERSIQFSMETEFCEFSPELEDHFEIFEHIRGFNVTIVT 162

Query: 61  SANTQDETLPPWNGFLQKDEGETQ 85
           SANTQDETL  W+GFLQKDEGETQ
Sbjct: 163 SANTQDETLLLWSGFLQKDEGETQ 186

[Close]

BLAST of Csor.00g054390 vs. ExPASy Swiss-Prot
Match: Q05492 (60S ribosomal protein L5, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPL5 PE=2 SV=2)

HSP 1 Score: 139.4 bits (350), Expect = 2.9e-32
Identity = 71/85 (83.53%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 1   MSNFSVRIATVMSLLDSPVEIRENSMQFSMATEFCSFSPKLEDHFEIFEHIIGFNVTIVT 60
           MSNF VRI TVMSLLDS VEIRENS+QFSM TEFC FSP+LEDHFEIFEHI  FNVTIVT
Sbjct: 104 MSNFLVRILTVMSLLDSRVEIRENSIQFSMETEFCEFSPELEDHFEIFEHIRRFNVTIVT 163

Query: 61  SANTQDETLPPWNGFLQKDEGETQK 86
           SANTQDETL  W+GFLQKDEGE+ K
Sbjct: 164 SANTQDETLLLWSGFLQKDEGESFK 188

[Close]

BLAST of Csor.00g054390 vs. ExPASy Swiss-Prot
Match: P26860 (60S ribosomal protein L5, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPL5 PE=3 SV=2)

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-20
Identity = 47/79 (59.49%), Postives = 62/79 (78.48%), Query Frame = 0


Query: 1   MSNFSVRIATVMSLLDSPVEIRENSMQFSMATEFCSFSPKLEDHFEIFEHIIGFNVTIVT 60
           M NF  ++ T++S  D PV+I++NS+Q SMAT      P+++DHFEIFEHI GF+VTIVT
Sbjct: 109 MYNFLEKLVTIISFYDYPVKIQKNSIQLSMATSLLRLFPEIQDHFEIFEHIRGFDVTIVT 168

Query: 61  SANTQDETLPPWNGFLQKD 80
           SANTQDET+  W+GFLQK+
Sbjct: 169 SANTQDETVILWSGFLQKE 187

[Close]

BLAST of Csor.00g054390 vs. NCBI nr
Match: KAG6577417.1 (60S ribosomal protein L5, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 270 bits (690), Expect = 2.63e-91
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MSNFSVRIATVMSLLDSPVEIRENSMQFSMATEFCSFSPKLEDHFEIFEHIIGFNVTIVT 60
           MSNFSVRIATVMSLLDSPVEIRENSMQFSMATEFCSFSPKLEDHFEIFEHIIGFNVTIVT
Sbjct: 1   MSNFSVRIATVMSLLDSPVEIRENSMQFSMATEFCSFSPKLEDHFEIFEHIIGFNVTIVT 60

Query: 61  SANTQDETLPPWNGFLQKDEGETQKPFVKIPPNLTSDMRDKDREKLSKLTRKEFLCTSKK 120
           SANTQDETLPPWNGFLQKDEGETQKPFVKIPPNLTSDMRDKDREKLSKLTRKEFLCTSKK
Sbjct: 61  SANTQDETLPPWNGFLQKDEGETQKPFVKIPPNLTSDMRDKDREKLSKLTRKEFLCTSKK 120

Query: 121 PMYFHGSPSWSK 132
           PMYFHGSPSWSK
Sbjct: 121 PMYFHGSPSWSK 132

[Close]

BLAST of Csor.00g054390 vs. NCBI nr
Match: KAG6570300.1 (60S ribosomal protein L5, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 262 bits (670), Expect = 2.96e-88
Identity = 127/132 (96.21%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   MSNFSVRIATVMSLLDSPVEIRENSMQFSMATEFCSFSPKLEDHFEIFEHIIGFNVTIVT 60
           MSNF+VRIATVMSLLDSPVEIRENSMQFSM TEFCSFSP+LEDHFEIFEHIIGFNVTI+T
Sbjct: 1   MSNFAVRIATVMSLLDSPVEIRENSMQFSMETEFCSFSPELEDHFEIFEHIIGFNVTILT 60

Query: 61  SANTQDETLPPWNGFLQKDEGETQKPFVKIPPNLTSDMRDKDREKLSKLTRKEFLCTSKK 120
           SANTQDETLPPW+GFLQKDEGETQKPFVKIPPNLTSDMRDKDREKLSKLTRKEFLCTSKK
Sbjct: 61  SANTQDETLPPWSGFLQKDEGETQKPFVKIPPNLTSDMRDKDREKLSKLTRKEFLCTSKK 120

Query: 121 PMYFHGSPSWSK 132
           PMYFHGSPSWSK
Sbjct: 121 PMYFHGSPSWSK 132

[Close]

BLAST of Csor.00g054390 vs. NCBI nr
Match: KAF8364956.1 (hypothetical protein HHK36_033039 [Tetracentron sinense] >KAF8376890.1 hypothetical protein HHK36_031399 [Tetracentron sinense])

HSP 1 Score: 176 bits (447), Expect = 1.78e-52
Identity = 91/114 (79.82%), Postives = 98/114 (85.96%), Query Frame = 0


Query: 1   MSNFSVRIATVMSLLDSPVEIRENSMQFSMATEFCSFSPKLEDHFEIFEHIIGFNVTIVT 60
           M +FSVRI+TVMSLLDSPVEIRENS+QFSM TEFC FSP+LEDHFEIFEHI GFNVTIVT
Sbjct: 105 MFHFSVRISTVMSLLDSPVEIRENSIQFSMETEFCEFSPELEDHFEIFEHIRGFNVTIVT 164

Query: 61  SANTQDETLPPWNGFLQKDEGETQKPFVKI---PPNLTSDMRDKDREKLSKLTR 111
           SANTQDETLPPW+GFLQKDEGETQ+   K     P+L SDMRDK R KLSKL R
Sbjct: 165 SANTQDETLPPWSGFLQKDEGETQRKLYKAFCKDPDLPSDMRDKHRYKLSKLPR 218

[Close]

BLAST of Csor.00g054390 vs. NCBI nr
Match: XP_023512239.1 (uncharacterized protein LOC111777027 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 164 bits (414), Expect = 1.25e-48
Identity = 79/84 (94.05%), Postives = 83/84 (98.81%), Query Frame = 0


Query: 1   MSNFSVRIATVMSLLDSPVEIRENSMQFSMATEFCSFSPKLEDHFEIFEHIIGFNVTIVT 60
           MSNF+VRI+TVMSLLDSPVEIRENSMQFSM TEFCSFSP+LEDHFEIFEHIIGFNVTIVT
Sbjct: 94  MSNFAVRISTVMSLLDSPVEIRENSMQFSMETEFCSFSPELEDHFEIFEHIIGFNVTIVT 153

Query: 61  SANTQDETLPPWNGFLQKDEGETQ 84
           SANTQDETLPPW+GFLQKDEGETQ
Sbjct: 154 SANTQDETLPPWSGFLQKDEGETQ 177

[Close]

BLAST of Csor.00g054390 vs. NCBI nr
Match: YP_009913650.1 (ribosomal protein L5 [Luffa acutangula] >QLJ93020.1 ribosomal protein L5 [Luffa acutangula])

HSP 1 Score: 161 bits (407), Expect = 1.85e-47
Identity = 77/84 (91.67%), Postives = 82/84 (97.62%), Query Frame = 0


Query: 1   MSNFSVRIATVMSLLDSPVEIRENSMQFSMATEFCSFSPKLEDHFEIFEHIIGFNVTIVT 60
           MSNFSVRI+TVMSLLDSPVEIRENS+QFSM TEFC FSP+LEDHFEIFEHI+GFNVTIVT
Sbjct: 102 MSNFSVRISTVMSLLDSPVEIRENSIQFSMETEFCEFSPELEDHFEIFEHILGFNVTIVT 161

Query: 61  SANTQDETLPPWNGFLQKDEGETQ 84
           SANTQDETLPPW+GFLQKDEGETQ
Sbjct: 162 SANTQDETLPPWSGFLQKDEGETQ 185

[Close]

BLAST of Csor.00g054390 vs. ExPASy TrEMBL
Match: A0A7D5Y005 (Ribosomal protein L5 OS=Luffa acutangula OX=56866 GN=rpl5 PE=3 SV=1)

HSP 1 Score: 161 bits (407), Expect = 8.96e-48
Identity = 77/84 (91.67%), Postives = 82/84 (97.62%), Query Frame = 0


Query: 1   MSNFSVRIATVMSLLDSPVEIRENSMQFSMATEFCSFSPKLEDHFEIFEHIIGFNVTIVT 60
           MSNFSVRI+TVMSLLDSPVEIRENS+QFSM TEFC FSP+LEDHFEIFEHI+GFNVTIVT
Sbjct: 102 MSNFSVRISTVMSLLDSPVEIRENSIQFSMETEFCEFSPELEDHFEIFEHILGFNVTIVT 161

Query: 61  SANTQDETLPPWNGFLQKDEGETQ 84
           SANTQDETLPPW+GFLQKDEGETQ
Sbjct: 162 SANTQDETLPPWSGFLQKDEGETQ 185

[Close]

BLAST of Csor.00g054390 vs. ExPASy TrEMBL
Match: V4KNP1 (Uncharacterized protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10001274mg PE=3 SV=1)

HSP 1 Score: 163 bits (412), Expect = 1.00e-47
Identity = 85/109 (77.98%), Postives = 90/109 (82.57%), Query Frame = 0


Query: 1   MSNFSVRIATVMSLLDSPVEIRENSMQFSMATEFCSFSPKLEDHFEIFEHIIGFNVTIVT 60
           MSNFSVRI+TVMSLLD PVEIR+NS+QFSM TEFC FSP+LEDHFEIFEHI GFNVTIVT
Sbjct: 102 MSNFSVRISTVMSLLDFPVEIRKNSIQFSMETEFCEFSPELEDHFEIFEHIRGFNVTIVT 161

Query: 61  SANTQDETLPPWNGFLQKDEGETQKPFVKIPPNLTSDMRDKDREKLSKL 109
           SANTQDETLPPW+GFLQKDEGET             DMRDK R KLSKL
Sbjct: 162 SANTQDETLPPWSGFLQKDEGETH------------DMRDKHRYKLSKL 198

[Close]

BLAST of Csor.00g054390 vs. ExPASy TrEMBL
Match: A0A6J1F471 (uncharacterized protein LOC111440022 OS=Cucurbita moschata OX=3662 GN=LOC111440022 PE=3 SV=1)

HSP 1 Score: 160 bits (404), Expect = 2.56e-47
Identity = 79/84 (94.05%), Postives = 81/84 (96.43%), Query Frame = 0


Query: 1   MSNFSVRIATVMSLLDSPVEIRENSMQFSMATEFCSFSPKLEDHFEIFEHIIGFNVTIVT 60
           MSNFSVRIATVMSLLDSPVEIRENSMQFSM  EFCSFSP+LEDHFEIFEHIIGFNVTIVT
Sbjct: 102 MSNFSVRIATVMSLLDSPVEIRENSMQFSMEIEFCSFSPELEDHFEIFEHIIGFNVTIVT 161

Query: 61  SANTQDETLPPWNGFLQKDEGETQ 84
           SANTQDETL PW+GFLQKDEGETQ
Sbjct: 162 SANTQDETLLPWSGFLQKDEGETQ 185

[Close]

BLAST of Csor.00g054390 vs. ExPASy TrEMBL
Match: A0A0M4REQ6 (Ribosomal protein L5 OS=Cannabis sativa OX=3483 GN=rpl5 PE=3 SV=1)

HSP 1 Score: 159 bits (402), Expect = 5.14e-47
Identity = 77/84 (91.67%), Postives = 81/84 (96.43%), Query Frame = 0


Query: 1   MSNFSVRIATVMSLLDSPVEIRENSMQFSMATEFCSFSPKLEDHFEIFEHIIGFNVTIVT 60
           MSNFSVRI+TVMSLLDSPVEIRENS+QFSM TEFC FSP+LEDHFEIFEHI GFNVTIVT
Sbjct: 102 MSNFSVRISTVMSLLDSPVEIRENSIQFSMETEFCEFSPELEDHFEIFEHIRGFNVTIVT 161

Query: 61  SANTQDETLPPWNGFLQKDEGETQ 84
           SANTQDETLPPW+GFLQKDEGETQ
Sbjct: 162 SANTQDETLPPWSGFLQKDEGETQ 185

[Close]

BLAST of Csor.00g054390 vs. ExPASy TrEMBL
Match: A0A6A1VWK1 (60S ribosomal protein L5, mitochondrial OS=Morella rubra OX=262757 GN=CJ030_MR5G009950 PE=3 SV=1)

HSP 1 Score: 159 bits (402), Expect = 5.14e-47
Identity = 77/84 (91.67%), Postives = 81/84 (96.43%), Query Frame = 0


Query: 1   MSNFSVRIATVMSLLDSPVEIRENSMQFSMATEFCSFSPKLEDHFEIFEHIIGFNVTIVT 60
           MSNFSVRI+TVMSLLDSPVEIRENS+QFSM TEFC FSP+LEDHFEIFEHI GFNVTIVT
Sbjct: 102 MSNFSVRISTVMSLLDSPVEIRENSIQFSMETEFCEFSPELEDHFEIFEHIRGFNVTIVT 161

Query: 61  SANTQDETLPPWNGFLQKDEGETQ 84
           SANTQDETLPPW+GFLQKDEGETQ
Sbjct: 162 SANTQDETLPPWSGFLQKDEGETQ 185

[Close]

BLAST of Csor.00g054390 vs. TAIR 10
Match: AT2G07725.1 (Ribosomal L5P family protein )

HSP 1 Score: 151.8 bits (382), Expect = 4.0e-37
Identity = 73/84 (86.90%), Postives = 79/84 (94.05%), Query Frame = 0


Query: 1   MSNFSVRIATVMSLLDSPVEIRENSMQFSMATEFCSFSPKLEDHFEIFEHIIGFNVTIVT 60
           MSNFSVRI+TVMSLLD PVEIR+NS+QFSM TEFC FSP+LEDHFEIFEHI GFNVTI+T
Sbjct: 102 MSNFSVRISTVMSLLDFPVEIRKNSIQFSMETEFCEFSPELEDHFEIFEHIRGFNVTIIT 161

Query: 61  SANTQDETLPPWNGFLQKDEGETQ 85
           SANTQDETLP W+GFLQKDEGETQ
Sbjct: 162 SANTQDETLPLWSGFLQKDEGETQ 185

[Close]

BLAST of Csor.00g054390 vs. TAIR 10
Match: ATMG00210.1 (ribosomal protein L5 )

HSP 1 Score: 151.8 bits (382), Expect = 4.0e-37
Identity = 73/84 (86.90%), Postives = 79/84 (94.05%), Query Frame = 0


Query: 1   MSNFSVRIATVMSLLDSPVEIRENSMQFSMATEFCSFSPKLEDHFEIFEHIIGFNVTIVT 60
           MSNFSVRI+TVMSLLD PVEIR+NS+QFSM TEFC FSP+LEDHFEIFEHI GFNVTI+T
Sbjct: 102 MSNFSVRISTVMSLLDFPVEIRKNSIQFSMETEFCEFSPELEDHFEIFEHIRGFNVTIIT 161

Query: 61  SANTQDETLPPWNGFLQKDEGETQ 85
           SANTQDETLP W+GFLQKDEGETQ
Sbjct: 162 SANTQDETLPLWSGFLQKDEGETQ 185

The following BLAST results are available for this feature:

BLAST of Csor.00g054390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49388	2.1e-35	85.71	60S ribosomal protein L5, mitochondrial OS=Brassica napus OX=3708 GN=RPL5 PE=3 S...	[more]
P42793	6.8e-34	84.52	60S ribosomal protein L5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL5 ...	[more]
P51409	8.9e-34	84.52	60S ribosomal protein L5, mitochondrial OS=Solanum tuberosum OX=4113 GN=RPL5 PE=...	[more]
Q05492	2.9e-32	83.53	60S ribosomal protein L5, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPL5 ...	[more]
P26860	1.1e-20	59.49	60S ribosomal protein L5, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPL5...	[more]

BLAST of Csor.00g054390 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6577417.1	2.63e-91	100.00	60S ribosomal protein L5, mitochondrial, partial [Cucurbita argyrosperma subsp. ...	[more]
KAG6570300.1	2.96e-88	96.21	60S ribosomal protein L5, mitochondrial, partial [Cucurbita argyrosperma subsp. ...	[more]
KAF8364956.1	1.78e-52	79.82	hypothetical protein HHK36_033039 [Tetracentron sinense] >KAF8376890.1 hypotheti...	[more]
XP_023512239.1	1.25e-48	94.05	uncharacterized protein LOC111777027 [Cucurbita pepo subsp. pepo]	[more]
YP_009913650.1	1.85e-47	91.67	ribosomal protein L5 [Luffa acutangula] >QLJ93020.1 ribosomal protein L5 [Luffa ...	[more]

BLAST of Csor.00g054390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7D5Y005	8.96e-48	91.67	Ribosomal protein L5 OS=Luffa acutangula OX=56866 GN=rpl5 PE=3 SV=1	[more]
V4KNP1	1.00e-47	77.98	Uncharacterized protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10001274mg PE=...	[more]
A0A6J1F471	2.56e-47	94.05	uncharacterized protein LOC111440022 OS=Cucurbita moschata OX=3662 GN=LOC1114400...	[more]
A0A0M4REQ6	5.14e-47	91.67	Ribosomal protein L5 OS=Cannabis sativa OX=3483 GN=rpl5 PE=3 SV=1	[more]
A0A6A1VWK1	5.14e-47	91.67	60S ribosomal protein L5, mitochondrial OS=Morella rubra OX=262757 GN=CJ030_MR5G...	[more]

BLAST of Csor.00g054390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07725.1	4.0e-37	86.90	Ribosomal L5P family protein	[more]
ATMG00210.1	4.0e-37	86.90	ribosomal protein L5	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022803	Ribosomal protein L5 domain superfamily	GENE3D	3.30.1440.10		coord: 1..77 e-value: 1.2E-7 score: 33.4
IPR022803	Ribosomal protein L5 domain superfamily	SUPERFAMILY	55282	RL5-like	coord: 1..77
IPR002132	Ribosomal protein L5	PANTHER	PTHR11994	60S RIBOSOMAL PROTEIN L11-RELATED	coord: 1..80
None	No IPR available	PANTHER	PTHR11994:SF11	60S RIBOSOMAL PROTEIN L5, MITOCHONDRIAL	coord: 1..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g054390.m01	Csor.00g054390.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome