Csor.00g054210 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g054210
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr15: 7526071 .. 7526358 (+)
RNA-Seq ExpressionCsor.00g054210
SyntenyCsor.00g054210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACGCATATCGAAGACATCGTCGCCCCTTTCCTATTCTTTCTTCATTGCGTTGTTGTCTCCATCATTGTTTCTCTCTTTCGCTTCTTTCTCGTCATCTTCCACACTCATCTATTCCTCATCGCTTGTCATTGTCGTTCACGACCAATGTCGTCCAAGGAGGGACTCGCACACTTGAAGCCAAGAGTTACACTGTCTCCCTCGCACACCAGCCATTGCAACTATTGCCCCCACATTCACCACCACAGCTACCTGTCCATGAGACGATCATTGTCGCTATTATCTAG

mRNA sequence

ATGCACGCATATCGAAGACATCGTCGCCCCTTTCCTATTCTTTCTTCATTGCGTTGTTGTCTCCATCATTGTTTCTCTCTTTCGCTTCTTTCTCGTCATCTTCCACACTCATCTATTCCTCATCGCTTGTCATTGTCGTTCACGACCAATGTCGTCCAAGGAGGGACTCGCACACTTGAAGCCAAGAGTTACACTGTCTCCCTCGCACACCAGCCATTGCAACTATTGCCCCCACATTCACCACCACAGCTACCTGTCCATGAGACGATCATTGTCGCTATTATCTAG

Coding sequence (CDS)

ATGCACGCATATCGAAGACATCGTCGCCCCTTTCCTATTCTTTCTTCATTGCGTTGTTGTCTCCATCATTGTTTCTCTCTTTCGCTTCTTTCTCGTCATCTTCCACACTCATCTATTCCTCATCGCTTGTCATTGTCGTTCACGACCAATGTCGTCCAAGGAGGGACTCGCACACTTGAAGCCAAGAGTTACACTGTCTCCCTCGCACACCAGCCATTGCAACTATTGCCCCCACATTCACCACCACAGCTACCTGTCCATGAGACGATCATTGTCGCTATTATCTAG

Protein sequence

MHAYRRHRRPFPILSSLRCCLHHCFSLSLLSRHLPHSSIPHRLSLSFTTNVVQGGTRTLEAKSYTVSLAHQPLQLLPPHSPPQLPVHETIIVAII
Homology
[Close]
BLAST of Csor.00g054210 vs. NCBI nr
Match: KAG6579298.1 (hypothetical protein SDJN03_23746, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 193 bits (490), Expect = 5.57e-62
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  MHAYRRHRRPFPILSSLRCCLHHCFSLSLLSRHLPHSSIPHRLSLSFTTNVVQGGTRTLE 60
          MHAYRRHRRPFPILSSLRCCLHHCFSLSLLSRHLPHSSIPHRLSLSFTTNVVQGGTRTLE
Sbjct: 1  MHAYRRHRRPFPILSSLRCCLHHCFSLSLLSRHLPHSSIPHRLSLSFTTNVVQGGTRTLE 60

Query: 61 AKSYTVSLAHQPLQLLPPHSPPQLPVHETIIVAII 95
          AKSYTVSLAHQPLQLLPPHSPPQLPVHETIIVAII
Sbjct: 61 AKSYTVSLAHQPLQLLPPHSPPQLPVHETIIVAII 95

The following BLAST results are available for this feature:
BLAST of Csor.00g054210 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g054210 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6579298.15.57e-62100.00hypothetical protein SDJN03_23746, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g054210 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g054210 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g054210.m01Csor.00g054210.m01mRNA