Csor.00g054190 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGTTTGGCGGCAGTGGCGGCGGTGGCGACAAGCATCAGCACCTCCTGCATCTGAATTTCCATTTCCATATTCATTTGCCTCACTTTCACCACCATCATCATCGGAACAAGGTGGAGACTCCCAAGGGGTGTTTGGCAATTCTCGTCGGCCAACAGCAAGAGCGGTTCGTGATTCCTGTCATTTATGTTAACCATCCTTTGTTCGCTCGGCTCTTGAAGGAGGCCGAAGACGAGTATGGCTTCGACCAGAAAGGACCTATCGCCATCCCTTGCCCTGTCGACGACTTCCGTACTCTCCAGGGCATAATTCATCACGATCATCACCCCCATCATCTTCTTCCCATCTCCTGTTTTAGGGATTCGTCTCATCCCCATTGCTGATATTGATGAATACCGACCTTAGTTCTTAGTTTTGGGTCCTCTTCGTTTGTTTGTTAATTTTCTGATACACATAACCAATAGCAATTCATGCGTTACCATTGCTTTCTGGAAGTGGAATTGGAATTTCCTCTGTTTATACATTCAAATTATTGTCACTGTCAACATGGTCTAGCTTGCCATTGAATGTTGTATCATATACGAGCTTCTTCAGCCTCAATCATGATGATTAATCTCTGTTTCTTCCTAGTTAAAATTCAAATAACGTAATCAAAACTGTCTGAAATTGATTCTCGGAAGGATATTTGACCATTGGAACTCTTTTATCTTTCTAAATTGGCCCGTTTGACTTCAAAAAATGAGGGATCTCTATCCCATGGGAAAAGGGGTGGGTGGAGATTGCTTTGCTTGTAAGGATGTAATAACTTTTTATTATTCTTTCTGGCAATGACACCTACAGCTTTGCTGACGCGTTTTTCTGTGTATACTAAATCCTCCCTTGAATAACGCTAAGTCAAATTCTCTTTAGAACATTATTATGCTTCTTCCACTTCAGTATGTATTGCATTACAGTCTTGCAGATGCCATCATTGACTTCCCAATTATGACCATCCATAGCCCACATGGAATGGACGACATCAGCTCACCCCACCTCAACCCCATCAGTATTCTTACTTTCCTGTTTCCCTTCATTGCTTTTCTTTTATTCATATATTCATTACGTTTGGAAGTAACTCGATATGTCAAGACTAAACCCATATGTTTACAGAAAAACATAAAAAAGAAACAGAATGAAGAATTCTAAAATCTTGAAAACTATATCTTCAAACGTTTATTTCAATTGAGCACTTAAGTTTGGGAGAATGAAAGAACATAATATAGCATATCAGTTTGGCAAGTCTCAGTAAAATCTGTATTCTGATCTCTGCCTTGTTTTTACATGTAGGAAGGATTATAAAGAACTGGGCGGTGAAATGGGAAAGAATGCAATACATGGTACATCCTCGTTTCTTTTTATGTTTCTCAATCGCATGGCCCTCTTTTATTCAGTGTTTTGAAGCTGCTAGGAATCAAATTGATAATACAATAAGGAGAAAAAAATGAATCAAGTGTACAGCTATTGAACTATCTGCTTCTTCTGTGTGTTAATGTCTTGTATTAGAGTAGCGGATTGTAA ATGGGGTTTGGCGGCAGTGGCGGCGGTGGCGACAAGCATCAGCACCTCCTGCATCTGAATTTCCATTTCCATATTCATTTGCCTCACTTTCACCACCATCATCATCGGAACAAGGTGGAGACTCCCAAGGGGTGTTTGGCAATTCTCGTCGGCCAACAGCAAGAGCGTCTTGCAGATGCCATCATTGACTTCCCAATTATGACCATCCATAGCCCACATGGAATGGACGACATCAGCTCACCCCACCTCAACCCCATCAGAAGGATTATAAAGAACTGGGCGGTGAAATGGGAAAGAATGCAATACATGAGTAGCGGATTGTAA ATGGGGTTTGGCGGCAGTGGCGGCGGTGGCGACAAGCATCAGCACCTCCTGCATCTGAATTTCCATTTCCATATTCATTTGCCTCACTTTCACCACCATCATCATCGGAACAAGGTGGAGACTCCCAAGGGGTGTTTGGCAATTCTCGTCGGCCAACAGCAAGAGCGTCTTGCAGATGCCATCATTGACTTCCCAATTATGACCATCCATAGCCCACATGGAATGGACGACATCAGCTCACCCCACCTCAACCCCATCAGAAGGATTATAAAGAACTGGGCGGTGAAATGGGAAAGAATGCAATACATGAGTAGCGGATTGTAA MGFGGSGGGGDKHQHLLHLNFHFHIHLPHFHHHHHRNKVETPKGCLAILVGQQQERLADAIIDFPIMTIHSPHGMDDISSPHLNPIRRIIKNWAVKWERMQYMSSGL Homology
BLAST of Csor.00g054190 vs. NCBI nr
Match: KAG6579300.1 (hypothetical protein SDJN03_23748, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 230 bits (587), Expect = 2.12e-76 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of Csor.00g054190 vs. NCBI nr
Match: KAG7016800.1 (Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 124 bits (311), Expect = 1.15e-33 Identity = 57/62 (91.94%), Postives = 58/62 (93.55%), Query Frame = 0
BLAST of Csor.00g054190 vs. NCBI nr
Match: XP_022974339.1 (auxin-responsive protein SAUR32-like [Cucurbita maxima]) HSP 1 Score: 117 bits (293), Expect = 2.74e-31 Identity = 56/65 (86.15%), Postives = 57/65 (87.69%), Query Frame = 0
BLAST of Csor.00g054190 vs. NCBI nr
Match: XP_023549648.1 (auxin-responsive protein SAUR32 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 117 bits (293), Expect = 2.74e-31 Identity = 56/65 (86.15%), Postives = 57/65 (87.69%), Query Frame = 0
BLAST of Csor.00g054190 vs. NCBI nr
Match: KGN49830.1 (hypothetical protein Csa_000428 [Cucumis sativus]) HSP 1 Score: 87.0 bits (214), Expect = 2.03e-19 Identity = 43/58 (74.14%), Postives = 48/58 (82.76%), Query Frame = 0
BLAST of Csor.00g054190 vs. ExPASy TrEMBL
Match: A0A6J1IHB8 (auxin-responsive protein SAUR32-like OS=Cucurbita maxima OX=3661 GN=LOC111472971 PE=3 SV=1) HSP 1 Score: 117 bits (293), Expect = 1.33e-31 Identity = 56/65 (86.15%), Postives = 57/65 (87.69%), Query Frame = 0
BLAST of Csor.00g054190 vs. ExPASy TrEMBL
Match: A0A0A0KJC7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139100 PE=3 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 9.82e-20 Identity = 43/58 (74.14%), Postives = 48/58 (82.76%), Query Frame = 0
BLAST of Csor.00g054190 vs. ExPASy TrEMBL
Match: A0A6J1H1R3 (auxin-responsive protein SAUR32-like OS=Cucurbita moschata OX=3662 GN=LOC111459565 PE=3 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 6.19e-12 Identity = 33/51 (64.71%), Postives = 39/51 (76.47%), Query Frame = 0
BLAST of Csor.00g054190 vs. ExPASy TrEMBL
Match: A0A2G2X7E4 (Auxin-responsive protein SAUR32 OS=Capsicum baccatum OX=33114 GN=CQW23_07865 PE=3 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 8.20e-10 Identity = 39/92 (42.39%), Postives = 50/92 (54.35%), Query Frame = 0
BLAST of Csor.00g054190 vs. ExPASy TrEMBL
Match: A0A2G3CXV7 (Auxin-responsive protein SAUR32 OS=Capsicum chinense OX=80379 GN=BC332_08651 PE=3 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 8.20e-10 Identity = 39/92 (42.39%), Postives = 50/92 (54.35%), Query Frame = 0
BLAST of Csor.00g054190 vs. TAIR 10
Match: AT5G53590.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 51.2 bits (121), Expect = 5.9e-07 Identity = 24/65 (36.92%), Postives = 37/65 (56.92%), Query Frame = 0
BLAST of Csor.00g054190 vs. TAIR 10
Match: AT4G00880.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 41.2 bits (95), Expect = 6.1e-04 Identity = 25/65 (38.46%), Postives = 36/65 (55.38%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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