Csor.00g053570 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g053570
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Poly(A)-specific ribonuclease
Location	Csor_Chr12: 1954601 .. 1955425 (-)
RNA-Seq Expression	Csor.00g053570
Synteny	Csor.00g053570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCATATTGCCGAAAGGTGAGTCGATTCATATCCGTGAGGTGTGGAACCATAACGTGGAGGAAGAGTTCGCTCTAATGCGTGAAATTGTCGACCAATTTAATTACATAGCGATGGATACTGAGTTCCCCGGCGTGGTGGTTCGCCCTGTGGGTGCTTTTAAGAATATCAACGATTATAACTATCAAACCCTCAAAGATAATGTCGACACGTTGAAGTTGATTCAGTTGGGTCTTACGTTTTCTGATGAGAATGGGAATCTCCCAACTTGTGGAACAGATAAGTTTTGCATTTGGCAGTTCAATTTCAGGGAGTTCAACATTAGTAACGATATTTTCGCTAGTGATTCCATTGAGCTTTTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATTGATGTCAATCACTTCGGTGAGCTTCTAATGTCATCTGGGATTGTTTTGAACGATAATGTTTACTGGGTGACCTTTCACAGTGGGTATGATTTTGGGTACTTGCTGAAATTGTTGACTTGCCGAAGCCTACCAGGGACGCAGGCTGCATTCTTTGATTTGATCAATATGTATTTCCCAATGGTTTATGACATCAAGCATTTGATGAAGTTTTGCAACAGTTTCCATGGTGGGCTGAACAAGCTTGCAGAGTTATTAGAAGTGGAAAGGATTGGAGTTTGCCATCAAGCGGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTGAGGGATACTTTTTTCAATGGGTCTACTCAGAAATACGCCGGTGTTTTATATGGTCTGGGCGTTGAAACTGGCCAGACTACTAATTAA

mRNA sequence

ATGTCCATATTGCCGAAAGGTGAGTCGATTCATATCCGTGAGGTGTGGAACCATAACGTGGAGGAAGAGTTCGCTCTAATGCGTGAAATTGTCGACCAATTTAATTACATAGCGATGGATACTGAGTTCCCCGGCGTGGTGGTTCGCCCTGTGGGTGCTTTTAAGAATATCAACGATTATAACTATCAAACCCTCAAAGATAATGTCGACACGTTGAAGTTGATTCAGTTGGGTCTTACGTTTTCTGATGAGAATGGGAATCTCCCAACTTGTGGAACAGATAAGTTTTGCATTTGGCAGTTCAATTTCAGGGAGTTCAACATTAGTAACGATATTTTCGCTAGTGATTCCATTGAGCTTTTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATTGATGTCAATCACTTCGGTGAGCTTCTAATGTCATCTGGGATTGTTTTGAACGATAATGTTTACTGGGTGACCTTTCACAGTGGGTATGATTTTGGGTACTTGCTGAAATTGTTGACTTGCCGAAGCCTACCAGGGACGCAGGCTGCATTCTTTGATTTGATCAATATGTATTTCCCAATGGTTTATGACATCAAGCATTTGATGAAGTTTTGCAACAGTTTCCATGGTGGGCTGAACAAGCTTGCAGAGTTATTAGAAGTGGAAAGGATTGGAGTTTGCCATCAAGCGGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTGAGGGATACTTTTTTCAATGGGTCTACTCAGAAATACGCCGGTGTTTTATATGGTCTGGGCGTTGAAACTGGCCAGACTACTAATTAA

Coding sequence (CDS)

ATGTCCATATTGCCGAAAGGTGAGTCGATTCATATCCGTGAGGTGTGGAACCATAACGTGGAGGAAGAGTTCGCTCTAATGCGTGAAATTGTCGACCAATTTAATTACATAGCGATGGATACTGAGTTCCCCGGCGTGGTGGTTCGCCCTGTGGGTGCTTTTAAGAATATCAACGATTATAACTATCAAACCCTCAAAGATAATGTCGACACGTTGAAGTTGATTCAGTTGGGTCTTACGTTTTCTGATGAGAATGGGAATCTCCCAACTTGTGGAACAGATAAGTTTTGCATTTGGCAGTTCAATTTCAGGGAGTTCAACATTAGTAACGATATTTTCGCTAGTGATTCCATTGAGCTTTTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATTGATGTCAATCACTTCGGTGAGCTTCTAATGTCATCTGGGATTGTTTTGAACGATAATGTTTACTGGGTGACCTTTCACAGTGGGTATGATTTTGGGTACTTGCTGAAATTGTTGACTTGCCGAAGCCTACCAGGGACGCAGGCTGCATTCTTTGATTTGATCAATATGTATTTCCCAATGGTTTATGACATCAAGCATTTGATGAAGTTTTGCAACAGTTTCCATGGTGGGCTGAACAAGCTTGCAGAGTTATTAGAAGTGGAAAGGATTGGAGTTTGCCATCAAGCGGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTGAGGGATACTTTTTTCAATGGGTCTACTCAGAAATACGCCGGTGTTTTATATGGTCTGGGCGTTGAAACTGGCCAGACTACTAATTAA

Protein sequence

MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

Homology

[Close]

BLAST of Csor.00g053570 vs. ExPASy Swiss-Prot
Match: Q9SKZ2 (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 438.0 bits (1125), Expect = 8.1e-122
Identity = 202/272 (74.26%), Postives = 237/272 (87.13%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 60
           MS+  K +SI IREVWN N+E E AL+RE+VD F ++AMDTEFPG+V RPVG FK   +Y
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIWQFNFREFNISNDIFASDSIE 120
           +Y+TLK NV+ LK+IQLGLTFSDE GNLPTCGTD K+CIWQFNFREF++ +DI+A+DSIE
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 121 LLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSL 180
           LLRQ GIDF KNNE GID   F ELLMSSGIVLN+NV+WVTFHSGYDFGYLLKLLTC++L
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 181 PGTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           P TQ  FF++I++YFP VYDIKHLMKFCNS HGGLNKLAELL+VER+G+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ 272
           +CTFRKL++ FF GS +KY+GVLYGLGVE GQ
Sbjct: 241 SCTFRKLQENFFIGSMEKYSGVLYGLGVENGQ 272

[Close]

BLAST of Csor.00g053570 vs. ExPASy Swiss-Prot
Match: Q9SAI2 (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=CAF1-6 PE=1 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 9.0e-121
Identity = 200/271 (73.80%), Postives = 233/271 (85.98%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 60
           MS+  K +SI IREVWN N++EE  L+R++VD F Y+AMDTEFPG+VVRPVG FK+  DY
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120
           +Y+TLK NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF++ +DIFA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180
           L+Q GID  KN  +GID   F ELLMSSGIVLN+NV+WVTFHSGYDFGYLLKLLTC++LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
            +Q  FF LIN+YFP VYDIKHLMKFCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ 272
           CTFRKL++ FF G   KY+GVLYGLGVE GQ
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVENGQ 271

[Close]

BLAST of Csor.00g053570 vs. ExPASy Swiss-Prot
Match: Q9LEU4 (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=CAF1-10 PE=2 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 3.8e-119
Identity = 201/268 (75.00%), Postives = 232/268 (86.57%), Query Frame = 0


Query: 6   KGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTL 65
           K +SI IREVW++N+ EEFAL+REIVD+F+YIAMDTEFPGVV++PV  FK  ND NY+TL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 66  KDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIELLRQCG 125
           K+NVD LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFREFNI  DI+AS+SIELLRQCG
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 126 IDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAA 185
           IDF+KN E+GIDV  FGEL+MSSGIVLND + WVTFH GYDFGYL+KLLTC+ LP  QA 
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 186 FFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRK 245
           FF L+ +YFP VYDIKHLM FCN   GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

Query: 246 LRDTFFNGSTQKYAGVLYGLGVETGQTT 274
           L++ +F GST+KY GVLYGLGVE G TT
Sbjct: 246 LKERYFPGSTEKYTGVLYGLGVEDGTTT 273

[Close]

BLAST of Csor.00g053570 vs. ExPASy Swiss-Prot
Match: Q9S9P2 (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=CAF1-2 PE=1 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 3.8e-95
Identity = 164/264 (62.12%), Postives = 204/264 (77.27%), Query Frame = 0


Query: 8   ESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNIN------DYN 67
           ++I IREVWNHN+E+E AL+ + +D F Y+AMDTEFPG+V + V A  N N      +YN
Sbjct: 12  DTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYN 71

Query: 68  YQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIELL 127
           Y TLK NV+ LKLIQLGLT SDE GNLPTCGT+K CIWQFNFREFN+ +D+FA DSIELL
Sbjct: 72  YDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELL 131

Query: 128 RQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPG 187
           R+  ID +KNNE G+D   F ELLM SG+VLND ++WVTFH GYDFGYLLKLL+ + LP 
Sbjct: 132 RKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPE 191

Query: 188 TQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTAC 247
             + FFD +  +FP+VYDIK+LM FC + +GGL K+AELL V+R+G+ HQAGSDSLLT  
Sbjct: 192 EISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQAGSDSLLTLR 251

Query: 248 TFRKLRDTFFNGSTQKYAGVLYGL 266
           TF K+++ FF GS  KY+G L+GL
Sbjct: 252 TFIKMKEFFFTGSLLKYSGFLFGL 275

[Close]

BLAST of Csor.00g053570 vs. ExPASy Swiss-Prot
Match: Q9UFF9 (CCR4-NOT transcription complex subunit 8 OS=Homo sapiens OX=9606 GN=CNOT8 PE=1 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 3.8e-79
Identity = 144/265 (54.34%), Postives = 190/265 (71.70%), Query Frame = 0


Query: 12  IREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDT 71
           I EVW  N+EEE   +REIV  ++YIAMDTEFPGVVVRP+G F++  DY YQ L+ NVD 
Sbjct: 12  ICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDL 71

Query: 72  LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIELLRQCGIDFQKN 131
           LK+IQLGLTF++E G  P+        WQFNF+ FN++ D+++ DSI+LL   G+ FQK+
Sbjct: 72  LKIIQLGLTFTNEKGEYPS----GINTWQFNFK-FNLTEDMYSQDSIDLLANSGLQFQKH 131

Query: 132 NEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLIN 191
            EEGID  HF ELLM+SG+VL DNV W++FHSGYDFGY++KLLT   LP  +  FF ++N
Sbjct: 132 EEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHEFFHILN 191

Query: 192 MYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFF 251
           ++FP +YD+K+LMK C +  GGL ++A+ L+++RIG  HQAGSDSLLT   F ++++ FF
Sbjct: 192 LFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQRIGRQHQAGSDSLLTGMAFFRMKELFF 251

Query: 252 NGSTQ--KYAGVLYGLGVETGQTTN 275
             S    KY G LYGLG    Q  N
Sbjct: 252 EDSIDDAKYCGRLYGLGTGVAQKQN 271

[Close]

BLAST of Csor.00g053570 vs. NCBI nr
Match: XP_022951690.1 (probable CCR4-associated factor 1 homolog 7 [Cucurbita moschata] >XP_023002466.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita maxima] >KAG6585496.1 putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 573 bits (1478), Expect = 9.48e-207
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 60
           MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY
Sbjct: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120
           NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL
Sbjct: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 274
           CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Sbjct: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 274

[Close]

BLAST of Csor.00g053570 vs. NCBI nr
Match: XP_023538244.1 (probable CCR4-associated factor 1 homolog 7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 572 bits (1474), Expect = 3.86e-206
Identity = 273/274 (99.64%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 60
           MSILPKGESIHIREVWNHNVEEEFALMREIVD+FNYIAMDTEFPGVVVRPVGAFKNINDY
Sbjct: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDKFNYIAMDTEFPGVVVRPVGAFKNINDY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120
           NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL
Sbjct: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 274
           CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Sbjct: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 274

[Close]

BLAST of Csor.00g053570 vs. NCBI nr
Match: KAG7020412.1 (putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 573 bits (1478), Expect = 1.15e-202
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 60
           MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY
Sbjct: 261 MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 320

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120
           NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL
Sbjct: 321 NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 380

Query: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP
Sbjct: 381 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 440

Query: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 441 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 500

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 274
           CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Sbjct: 501 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 534

[Close]

BLAST of Csor.00g053570 vs. NCBI nr
Match: XP_022132176.1 (probable CCR4-associated factor 1 homolog 7 [Momordica charantia])

HSP 1 Score: 539 bits (1389), Expect = 3.52e-193
Identity = 257/274 (93.80%), Postives = 264/274 (96.35%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 60
           MSILPKGESIHIREVW+HN+EEEFAL+REIVDQFNYIAMDTEFPGVV+RPVGAFKNIN+Y
Sbjct: 1   MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120
           NYQTLKDNVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNIS DIFASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDF+KNNEEGIDVN F ELLMSSGIVLND V WVTFHSGYDFGYLLKLLTCRSLP
Sbjct: 121 LRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
            TQA FFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 DTQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 274
           CTFRKLRDTFFNGSTQKYAGVLYGLGVE GQ+ N
Sbjct: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVENGQSIN 274

[Close]

BLAST of Csor.00g053570 vs. NCBI nr
Match: XP_038886120.1 (probable CCR4-associated factor 1 homolog 7 [Benincasa hispida])

HSP 1 Score: 535 bits (1377), Expect = 2.38e-191
Identity = 252/274 (91.97%), Postives = 266/274 (97.08%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 60
           MSILPKGESI+IREVWNHN+EEEFAL+REIVDQFNYIAMDTEFPGVVVRPVG+FKNIN+Y
Sbjct: 1   MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120
           NY+TLK+NVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNI  DI+ASDSIEL
Sbjct: 61  NYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICEDIYASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180
           LR+CGIDF+K NEEGIDVN F ELLMSSGIVLNDN+YWVTFHSGYDFGYLLKLLTCR+LP
Sbjct: 121 LRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLP 180

Query: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
            TQA FFDLI+MYFPMVYDIKHLM+FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 QTQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 274
           CTFRKLRDTFFNGSTQKYAGVLYGLGVE GQTTN
Sbjct: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVEPGQTTN 274

[Close]

BLAST of Csor.00g053570 vs. ExPASy TrEMBL
Match: A0A6J1KLE0 (Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111496296 PE=3 SV=1)

HSP 1 Score: 573 bits (1478), Expect = 4.59e-207
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 60
           MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY
Sbjct: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120
           NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL
Sbjct: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 274
           CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Sbjct: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 274

[Close]

BLAST of Csor.00g053570 vs. ExPASy TrEMBL
Match: A0A6J1GJJ8 (Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111454439 PE=3 SV=1)

HSP 1 Score: 573 bits (1478), Expect = 4.59e-207
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 60
           MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY
Sbjct: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120
           NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL
Sbjct: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 274
           CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Sbjct: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 274

[Close]

BLAST of Csor.00g053570 vs. ExPASy TrEMBL
Match: A0A6J1BRI8 (Poly(A)-specific ribonuclease OS=Momordica charantia OX=3673 GN=LOC111005098 PE=3 SV=1)

HSP 1 Score: 539 bits (1389), Expect = 1.71e-193
Identity = 257/274 (93.80%), Postives = 264/274 (96.35%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 60
           MSILPKGESIHIREVW+HN+EEEFAL+REIVDQFNYIAMDTEFPGVV+RPVGAFKNIN+Y
Sbjct: 1   MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120
           NYQTLKDNVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNIS DIFASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDF+KNNEEGIDVN F ELLMSSGIVLND V WVTFHSGYDFGYLLKLLTCRSLP
Sbjct: 121 LRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
            TQA FFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 DTQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 274
           CTFRKLRDTFFNGSTQKYAGVLYGLGVE GQ+ N
Sbjct: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVENGQSIN 274

[Close]

BLAST of Csor.00g053570 vs. ExPASy TrEMBL
Match: A0A0A0LSM4 (Poly(A)-specific ribonuclease OS=Cucumis sativus OX=3659 GN=Csa_2G382590 PE=3 SV=1)

HSP 1 Score: 532 bits (1370), Expect = 1.34e-190
Identity = 250/274 (91.24%), Postives = 268/274 (97.81%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 60
           MSILPKGESI+IREVWN N+EEEFAL+R+IVDQFNYIAMDTEFPGVVVRPVG+FKNIN+Y
Sbjct: 1   MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120
           NY+TL++NVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNI +DI+ASDSIEL
Sbjct: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICDDIYASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180
           LR+CGIDFQK +EEGIDVN FGELLMSSGIVLNDN++WVTFHSGYDFGYLLKLLTCR+LP
Sbjct: 121 LRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLP 180

Query: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
            TQA FFDLI+MYFPMVYDIKHLM+FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 274
           CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Sbjct: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 274

[Close]

BLAST of Csor.00g053570 vs. ExPASy TrEMBL
Match: A0A6J1BVW9 (Poly(A)-specific ribonuclease OS=Momordica charantia OX=3673 GN=LOC111005192 PE=3 SV=1)

HSP 1 Score: 530 bits (1366), Expect = 5.47e-190
Identity = 251/274 (91.61%), Postives = 263/274 (95.99%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 60
           MSILPKG+SI IREVWN N+EEEFAL+REIVD+FNYIAMDTEFPGVV+RPVGAFKNINDY
Sbjct: 1   MSILPKGDSIQIREVWNDNLEEEFALIREIVDEFNYIAMDTEFPGVVLRPVGAFKNINDY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120
           NYQTLKDNVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFN+S DIFASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNVSEDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDF+KNNEEGIDVN FGELLMSSG+VLND V WVTFHSGYDFGYLLKLLTCR+LP
Sbjct: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRTLP 180

Query: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
            TQA FFDLIN+YFPMVYDIKHLMKFCNS HGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 DTQAGFFDLINIYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 274
           CTFRKLRDTFFNGST+KYAGVLYGLGVE+GQ TN
Sbjct: 241 CTFRKLRDTFFNGSTKKYAGVLYGLGVESGQRTN 274

[Close]

BLAST of Csor.00g053570 vs. TAIR 10
Match: AT2G32070.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 438.0 bits (1125), Expect = 5.8e-123
Identity = 202/272 (74.26%), Postives = 237/272 (87.13%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 60
           MS+  K +SI IREVWN N+E E AL+RE+VD F ++AMDTEFPG+V RPVG FK   +Y
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIWQFNFREFNISNDIFASDSIE 120
           +Y+TLK NV+ LK+IQLGLTFSDE GNLPTCGTD K+CIWQFNFREF++ +DI+A+DSIE
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 121 LLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSL 180
           LLRQ GIDF KNNE GID   F ELLMSSGIVLN+NV+WVTFHSGYDFGYLLKLLTC++L
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 181 PGTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           P TQ  FF++I++YFP VYDIKHLMKFCNS HGGLNKLAELL+VER+G+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ 272
           +CTFRKL++ FF GS +KY+GVLYGLGVE GQ
Sbjct: 241 SCTFRKLQENFFIGSMEKYSGVLYGLGVENGQ 272

[Close]

BLAST of Csor.00g053570 vs. TAIR 10
Match: AT1G80780.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 434.5 bits (1116), Expect = 6.4e-122
Identity = 200/271 (73.80%), Postives = 233/271 (85.98%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 60
           MS+  K +SI IREVWN N++EE  L+R++VD F Y+AMDTEFPG+VVRPVG FK+  DY
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120
           +Y+TLK NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF++ +DIFA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180
           L+Q GID  KN  +GID   F ELLMSSGIVLN+NV+WVTFHSGYDFGYLLKLLTC++LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
            +Q  FF LIN+YFP VYDIKHLMKFCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ 272
           CTFRKL++ FF G   KY+GVLYGLGVE GQ
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVENGQ 271

[Close]

BLAST of Csor.00g053570 vs. TAIR 10
Match: AT1G80780.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 434.5 bits (1116), Expect = 6.4e-122
Identity = 200/271 (73.80%), Postives = 233/271 (85.98%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 60
           MS+  K +SI IREVWN N++EE  L+R++VD F Y+AMDTEFPG+VVRPVG FK+  DY
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120
           +Y+TLK NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF++ +DIFA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180
           L+Q GID  KN  +GID   F ELLMSSGIVLN+NV+WVTFHSGYDFGYLLKLLTC++LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
            +Q  FF LIN+YFP VYDIKHLMKFCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ 272
           CTFRKL++ FF G   KY+GVLYGLGVE GQ
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVENGQ 271

[Close]

BLAST of Csor.00g053570 vs. TAIR 10
Match: AT1G80780.3 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 430.6 bits (1106), Expect = 9.2e-121
Identity = 198/268 (73.88%), Postives = 231/268 (86.19%), Query Frame = 0


Query: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 60
           MS+  K +SI IREVWN N++EE  L+R++VD F Y+AMDTEFPG+VVRPVG FK+  DY
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120
           +Y+TLK NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF++ +DIFA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180
           L+Q GID  KN  +GID   F ELLMSSGIVLN+NV+WVTFHSGYDFGYLLKLLTC++LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
            +Q  FF LIN+YFP VYDIKHLMKFCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVE 269
           CTFRKL++ FF G   KY+GVLYGLGVE
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVE 268

[Close]

BLAST of Csor.00g053570 vs. TAIR 10
Match: AT5G10960.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 429.1 bits (1102), Expect = 2.7e-120
Identity = 201/268 (75.00%), Postives = 232/268 (86.57%), Query Frame = 0


Query: 6   KGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTL 65
           K +SI IREVW++N+ EEFAL+REIVD+F+YIAMDTEFPGVV++PV  FK  ND NY+TL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 66  KDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIELLRQCG 125
           K+NVD LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFREFNI  DI+AS+SIELLRQCG
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 126 IDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAA 185
           IDF+KN E+GIDV  FGEL+MSSGIVLND + WVTFH GYDFGYL+KLLTC+ LP  QA 
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 186 FFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRK 245
           FF L+ +YFP VYDIKHLM FCN   GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

Query: 246 LRDTFFNGSTQKYAGVLYGLGVETGQTT 274
           L++ +F GST+KY GVLYGLGVE G TT
Sbjct: 246 LKERYFPGSTEKYTGVLYGLGVEDGTTT 273

The following BLAST results are available for this feature:

BLAST of Csor.00g053570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKZ2	8.1e-122	74.26	Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9SAI2	9.0e-121	73.80	Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9LEU4	3.8e-119	75.00	Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9S9P2	3.8e-95	62.12	Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9UFF9	3.8e-79	54.34	CCR4-NOT transcription complex subunit 8 OS=Homo sapiens OX=9606 GN=CNOT8 PE=1 S...	[more]

BLAST of Csor.00g053570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022951690.1	9.48e-207	100.00	probable CCR4-associated factor 1 homolog 7 [Cucurbita moschata] >XP_023002466.1...	[more]
XP_023538244.1	3.86e-206	99.64	probable CCR4-associated factor 1 homolog 7 [Cucurbita pepo subsp. pepo]	[more]
KAG7020412.1	1.15e-202	100.00	putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp....	[more]
XP_022132176.1	3.52e-193	93.80	probable CCR4-associated factor 1 homolog 7 [Momordica charantia]	[more]
XP_038886120.1	2.38e-191	91.97	probable CCR4-associated factor 1 homolog 7 [Benincasa hispida]	[more]

BLAST of Csor.00g053570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KLE0	4.59e-207	100.00	Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111496296 PE=3 S...	[more]
A0A6J1GJJ8	4.59e-207	100.00	Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111454439 PE=3...	[more]
A0A6J1BRI8	1.71e-193	93.80	Poly(A)-specific ribonuclease OS=Momordica charantia OX=3673 GN=LOC111005098 PE=...	[more]
A0A0A0LSM4	1.34e-190	91.24	Poly(A)-specific ribonuclease OS=Cucumis sativus OX=3659 GN=Csa_2G382590 PE=3 SV...	[more]
A0A6J1BVW9	5.47e-190	91.61	Poly(A)-specific ribonuclease OS=Momordica charantia OX=3673 GN=LOC111005192 PE=...	[more]

BLAST of Csor.00g053570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32070.1	5.8e-123	74.26	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.1	6.4e-122	73.80	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.2	6.4e-122	73.80	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.3	9.2e-121	73.88	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G10960.1	2.7e-120	75.00	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 15..136 e-value: 1.5E-12 score: 47.5
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 2..268 e-value: 3.5E-99 score: 333.3
None	No IPR available	PANTHER	PTHR10797:SF68	CCR4-ASSOCIATED FACTOR 1 HOMOLOG 10-RELATED	coord: 1..274
IPR039637	CCR4-NOT transcription complex subunit 7/8/Pop2	PANTHER	PTHR10797	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT	coord: 1..274
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 12..265

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g053570.m01	Csor.00g053570.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043928	exonucleolytic catabolism of deadenylated mRNA
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
cellular_component	GO:0030015	CCR4-NOT core complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000932	P-body
cellular_component	GO:0030014	CCR4-NOT complex
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004535	poly(A)-specific ribonuclease activity