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Csor.00g053120 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTACAAGACGACCATATCTAACAATCGAGTTTCCAACAAACACAAACACTAGAGGTAATAACAAGAAAAAGATCTTGAAATTGACCTTTGTTCTTTTCACCTGGGATCTGTAGCTTGAATATGATGACACAGATAGCAAAATGACCAAGATTCCAAGAACAGCAAGCAGAGGCCTTGGCGGAGGAGCTATGGAGGCCAAGGCCTGCTCTGCCCATCCTTGTTTCCATGATGGGCCTCTCCTCTCTCTTATCAACCAACCCATTGTTCTTCTCTCTGTTGTTTGA ATGATTACAAGACGACCATATCTAACAATCGAGTTTCCAACAAACACAAACACTAGAGATAGCAAAATGACCAAGATTCCAAGAACAGCAAGCAGAGGCCTTGGCGGAGGAGCTATGGAGGCCAAGGCCTGCTCTGCCCATCCTTGTTTCCATGATGGGCCTCTCCTCTCTCTTATCAACCAACCCATTGTTCTTCTCTCTGTTGTTTGA ATGATTACAAGACGACCATATCTAACAATCGAGTTTCCAACAAACACAAACACTAGAGATAGCAAAATGACCAAGATTCCAAGAACAGCAAGCAGAGGCCTTGGCGGAGGAGCTATGGAGGCCAAGGCCTGCTCTGCCCATCCTTGTTTCCATGATGGGCCTCTCCTCTCTCTTATCAACCAACCCATTGTTCTTCTCTCTGTTGTTTGA MITRRPYLTIEFPTNTNTRDSKMTKIPRTASRGLGGGAMEAKACSAHPCFHDGPLLSLINQPIVLLSVV Homology
BLAST of Csor.00g053120 vs. NCBI nr
Match: KAG6585541.1 (hypothetical protein SDJN03_18274, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 140 bits (354), Expect = 4.94e-42 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of Csor.00g053120 vs. NCBI nr
Match: KAG7020454.1 (hypothetical protein SDJN02_17138, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 139 bits (351), Expect = 1.38e-41 Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0
BLAST of Csor.00g053120 vs. NCBI nr
Match: XP_038884859.1 (uncharacterized protein LOC120075491 [Benincasa hispida]) HSP 1 Score: 81.6 bits (200), Expect = 3.35e-16 Identity = 37/44 (84.09%), Postives = 38/44 (86.36%), Query Frame = 0
BLAST of Csor.00g053120 vs. NCBI nr
Match: PON93893.1 (hypothetical protein TorRG33x02_102830 [Trema orientale]) HSP 1 Score: 50.4 bits (119), Expect = 3.55e-06 Identity = 25/44 (56.82%), Postives = 28/44 (63.64%), Query Frame = 0
BLAST of Csor.00g053120 vs. NCBI nr
Match: PON70726.1 (hypothetical protein PanWU01x14_077520, partial [Parasponia andersonii]) HSP 1 Score: 50.4 bits (119), Expect = 7.86e-06 Identity = 25/44 (56.82%), Postives = 28/44 (63.64%), Query Frame = 0
BLAST of Csor.00g053120 vs. ExPASy TrEMBL
Match: A0A2P5F7W8 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_102830 PE=4 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 1.72e-06 Identity = 25/44 (56.82%), Postives = 28/44 (63.64%), Query Frame = 0
BLAST of Csor.00g053120 vs. ExPASy TrEMBL
Match: A0A2P5DBQ6 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_077520 PE=4 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 3.80e-06 Identity = 25/44 (56.82%), Postives = 28/44 (63.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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