Csor.00g052840 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g052840
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	thioredoxin H-type-like
Location	Csor_Chr12: 2434436 .. 2435399 (+)
RNA-Seq Expression	Csor.00g052840
Synteny	Csor.00g052840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGAAGAAGGGCAGGTGATCGCATGCCATAAGAAAGCTGAGTGGGATGCTCATTTAGCGAAAGCGAAGGAATCTGGAAAACTGGTATCGTATTGTTGTTTTTGTTTTTCAGGCTCCTCATTTCTAGATTTCAATTGATTTCGATCGGATTTTGGATTTACTGGATATTATGTGTATTGAAGCATTTCACGTTTATGATTGCTTGTTAGGAGATCGTTTGATGTTTTGGTAAAAGTCGCGATGGATTCGTTAGGGTTTCTGATCTCTCTTACGCTAGTAGTAATATTCGATTTATCTCGATTGAATGATCGTGTTGAAATTGATGCTTTCGAGTTTTCCTTTATAACGTTTTGTGGAATCTTTTGATTTGTGTTATTCTTTAATCATTCTCTGTTACTTTTTTCGTTCTTTTTGGTAAGAAATTGTTGATTATTCTATTTTGCGTTGACCGAACTTGAGTGATTCTGTATTACAGTTTGTGTCTGTTTTTTTGTTCCTGATGATTCTTAAGTTTTGTTTGATAGATTGTTGTGGATTTTACTGCTTCCTGGTGCGGGCCATGCCGTACAATTGCTCCATATTTCTCAGAATTGGCTAAGAATCATCCCGGTGTCGTTTTCCTGAAAGTGGACGTCGATGAATTGAACGTAAATATATTGAATCTCTTTTAACTCTTCTCAATCTATGATATCATATGTCAACATTTCTGTTCCATCGCGATATTGCTGATTACTGTAGCATGCAGTGGAGCTGTTTTCTTTTTGACTGATCAAACAAAGGCTTCTGTTTCTCTCTGCAGACTGTTGCTACCGAGTGGGAGATCAATGCAATGCCGACATTTGTTTTCATGAAACGAGGGGAAACAGTTCACAAGATTGTTGGTGCTGATAAATCGGCGCTGTTGAAAAAAATAGAAGAGCTCAAGACTCCAACTGCTGCTACTACTTCTTCTACTGCTTAG

mRNA sequence

ATGGCTGAAGAAGGGCAGGTGATCGCATGCCATAAGAAAGCTGAGTGGGATGCTCATTTAGCGAAAGCGAAGGAATCTGGAAAACTGATTGTTGTGGATTTTACTGCTTCCTGGTGCGGGCCATGCCGTACAATTGCTCCATATTTCTCAGAATTGGCTAAGAATCATCCCGGTGTCGTTTTCCTGAAAGTGGACGTCGATGAATTGAACACTGTTGCTACCGAGTGGGAGATCAATGCAATGCCGACATTTGTTTTCATGAAACGAGGGGAAACAGTTCACAAGATTGTTGGTGCTGATAAATCGGCGCTGTTGAAAAAAATAGAAGAGCTCAAGACTCCAACTGCTGCTACTACTTCTTCTACTGCTTAG

Coding sequence (CDS)

ATGGCTGAAGAAGGGCAGGTGATCGCATGCCATAAGAAAGCTGAGTGGGATGCTCATTTAGCGAAAGCGAAGGAATCTGGAAAACTGATTGTTGTGGATTTTACTGCTTCCTGGTGCGGGCCATGCCGTACAATTGCTCCATATTTCTCAGAATTGGCTAAGAATCATCCCGGTGTCGTTTTCCTGAAAGTGGACGTCGATGAATTGAACACTGTTGCTACCGAGTGGGAGATCAATGCAATGCCGACATTTGTTTTCATGAAACGAGGGGAAACAGTTCACAAGATTGTTGGTGCTGATAAATCGGCGCTGTTGAAAAAAATAGAAGAGCTCAAGACTCCAACTGCTGCTACTACTTCTTCTACTGCTTAG

Protein sequence

MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTSSTA

Homology

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BLAST of Csor.00g052840 vs. ExPASy Swiss-Prot
Match: Q96419 (Thioredoxin H-type OS=Fagopyrum esculentum OX=3617 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 9.8e-35
Identity = 69/108 (63.89%), Postives = 80/108 (74.07%), Query Frame = 0


Query: 1   MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVV 60
           MAEE QVIACH   EW+    KAK+SGKLIV+DFTASWCGPCR I PY SELAK  P V 
Sbjct: 1   MAEEAQVIACHTVQEWNEKFQKAKDSGKLIVIDFTASWCGPCRVITPYVSELAKKFPHVA 60

Query: 61  FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKI 109
           F KVDVD+L  VA E+++ AMP+FV +K G+ V +IVGA K  LL KI
Sbjct: 61  FFKVDVDDLKDVAEEYKVEAMPSFVILKEGQEVERIVGARKDELLHKI 108

[Close]

BLAST of Csor.00g052840 vs. ExPASy Swiss-Prot
Match: Q0D840 (Thioredoxin H1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRXH PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 6.4e-34
Identity = 70/120 (58.33%), Postives = 87/120 (72.50%), Query Frame = 0


Query: 2   AEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVF 61
           AEEG VIACH K E+DA + KAKE+GK++++DFTASWCGPCR IAP F+E AK  PG VF
Sbjct: 3   AEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVF 62

Query: 62  LKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTSS 121
           LKVDVDEL  VA ++ + AMPTF+F+K G    K+VGA K  L   I +    TAA+ S+
Sbjct: 63  LKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKHVGATAASASA 122

[Close]

BLAST of Csor.00g052840 vs. ExPASy Swiss-Prot
Match: A2YIW7 (Thioredoxin H-type OS=Oryza sativa subsp. indica OX=39946 GN=TRXH PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 6.4e-34
Identity = 70/120 (58.33%), Postives = 87/120 (72.50%), Query Frame = 0


Query: 2   AEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVF 61
           AEEG VIACH K E+DA + KAKE+GK++++DFTASWCGPCR IAP F+E AK  PG VF
Sbjct: 3   AEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVF 62

Query: 62  LKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTSS 121
           LKVDVDEL  VA ++ + AMPTF+F+K G    K+VGA K  L   I +    TAA+ S+
Sbjct: 63  LKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKHVGATAASASA 122

[Close]

BLAST of Csor.00g052840 vs. ExPASy Swiss-Prot
Match: Q42403 (Thioredoxin H3 OS=Arabidopsis thaliana OX=3702 GN=TRX3 PE=1 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 8.3e-34
Identity = 69/117 (58.97%), Postives = 84/117 (71.79%), Query Frame = 0


Query: 1   MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVV 60
           MA EG+VIACH   +W   L  A ES KLIV+DFTA+WC PCR IAP F++LAK H  VV
Sbjct: 1   MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVV 60

Query: 61  FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAA 118
           F KVDVDELNTVA E+++ AMPTF+FMK GE    +VGA K  ++  +E+ KT  AA
Sbjct: 61  FFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKTVVAA 117

[Close]

BLAST of Csor.00g052840 vs. ExPASy Swiss-Prot
Match: P29448 (Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 3.2e-33
Identity = 65/107 (60.75%), Postives = 80/107 (74.77%), Query Frame = 0


Query: 2   AEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVF 61
           +EEGQVIACH    W+  L KA ES  L+VVDFTASWCGPCR IAP+F++LAK  P V+F
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLF 62

Query: 62  LKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKI 109
           LKVD DEL +VA++W I AMPTF+F+K G+ + K+VGA K  L   I
Sbjct: 63  LKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTI 109

[Close]

BLAST of Csor.00g052840 vs. NCBI nr
Match: XP_022951328.1 (thioredoxin H-type-like [Cucurbita moschata] >KAG6585569.1 hypothetical protein SDJN03_18302, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 248 bits (633), Expect = 6.67e-83
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVV 60
           MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVV
Sbjct: 1   MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVV 60

Query: 61  FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTS 120
           FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTS
Sbjct: 61  FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTS 120

Query: 121 STA 123
           STA
Sbjct: 121 STA 123

[Close]

BLAST of Csor.00g052840 vs. NCBI nr
Match: XP_023002551.1 (thioredoxin H-type-like [Cucurbita maxima])

HSP 1 Score: 244 bits (623), Expect = 2.16e-81
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVV 60
           MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVV
Sbjct: 1   MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVV 60

Query: 61  FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTS 120
           FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTS
Sbjct: 61  FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTS 120

[Close]

BLAST of Csor.00g052840 vs. NCBI nr
Match: XP_023537338.1 (thioredoxin H-type-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 242 bits (618), Expect = 1.25e-80
Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 0


Query: 1   MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVV 60
           MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCR IAPYFSELAKNHPGVV
Sbjct: 1   MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRAIAPYFSELAKNHPGVV 60

Query: 61  FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTS 120
           FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTS
Sbjct: 61  FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTS 120

[Close]

BLAST of Csor.00g052840 vs. NCBI nr
Match: KAG7020483.1 (hypothetical protein SDJN02_17168 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 236 bits (601), Expect = 1.02e-77
Identity = 123/144 (85.42%), Postives = 123/144 (85.42%), Query Frame = 0


Query: 1   MAEEGQVIACHKKAEWDAHLAKAKESGKLI---------------------VVDFTASWC 60
           MAEEGQVIACHKKAEWDAHLAKAKESGKLI                     VVDFTASWC
Sbjct: 1   MAEEGQVIACHKKAEWDAHLAKAKESGKLISIDFDRILDLLDIMCIEAFHIVVDFTASWC 60

Query: 61  GPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGA 120
           GPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGA
Sbjct: 61  GPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGA 120

Query: 121 DKSALLKKIEELKTPTAATTSSTA 123
           DKSALLKKIEELKTPTAATTSSTA
Sbjct: 121 DKSALLKKIEELKTPTAATTSSTA 144

[Close]

BLAST of Csor.00g052840 vs. NCBI nr
Match: XP_038886211.1 (thioredoxin H-type-like [Benincasa hispida])

HSP 1 Score: 220 bits (560), Expect = 8.81e-72
Identity = 106/120 (88.33%), Postives = 113/120 (94.17%), Query Frame = 0


Query: 1   MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVV 60
           M EEGQVIACHK+ EW+A LAK KESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGV+
Sbjct: 1   MGEEGQVIACHKQPEWEALLAKGKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVI 60

Query: 61  FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTS 120
           FLKVDVDELNTVA+EW+INAMPTFVF+K GETVHKIVGADK ALLKK+EELKTPTAA TS
Sbjct: 61  FLKVDVDELNTVASEWKINAMPTFVFVKGGETVHKIVGADKGALLKKLEELKTPTAAATS 120

[Close]

BLAST of Csor.00g052840 vs. ExPASy TrEMBL
Match: A0A6J1GHE8 (thioredoxin H-type-like OS=Cucurbita moschata OX=3662 GN=LOC111454193 PE=4 SV=1)

HSP 1 Score: 248 bits (633), Expect = 3.23e-83
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVV 60
           MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVV
Sbjct: 1   MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVV 60

Query: 61  FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTS 120
           FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTS
Sbjct: 61  FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTS 120

Query: 121 STA 123
           STA
Sbjct: 121 STA 123

[Close]

BLAST of Csor.00g052840 vs. ExPASy TrEMBL
Match: A0A6J1KLL7 (thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111496363 PE=4 SV=1)

HSP 1 Score: 244 bits (623), Expect = 1.05e-81
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVV 60
           MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVV
Sbjct: 1   MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVV 60

Query: 61  FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTS 120
           FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTS
Sbjct: 61  FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTS 120

[Close]

BLAST of Csor.00g052840 vs. ExPASy TrEMBL
Match: A0A1S3BB48 (thioredoxin H1-like OS=Cucumis melo OX=3656 GN=LOC103488007 PE=4 SV=1)

HSP 1 Score: 216 bits (550), Expect = 1.43e-70
Identity = 103/120 (85.83%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 1   MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVV 60
           M EEGQVIACHK++EWDA LAKAKESGKL+VVDFTASWCGPCRTIAPYFSELAKNHPGV+
Sbjct: 1   MGEEGQVIACHKQSEWDALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHPGVM 60

Query: 61  FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTS 120
           FLKVDVDELN +A+EW+INAMPTFVF+K GET+HKIVGAD++ALLKKIEELKT TAA TS
Sbjct: 61  FLKVDVDELNAIASEWKINAMPTFVFVKGGETLHKIVGADRAALLKKIEELKTSTAAATS 120

[Close]

BLAST of Csor.00g052840 vs. ExPASy TrEMBL
Match: A0A0A0LRK2 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G362490 PE=4 SV=1)

HSP 1 Score: 209 bits (531), Expect = 1.16e-67
Identity = 100/123 (81.30%), Postives = 113/123 (91.87%), Query Frame = 0


Query: 1   MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVV 60
           M EEGQVIACHK++EW+A LAKAKESGKL+VVDFTASWCGPCRTIAPYFSELAKNH GV+
Sbjct: 1   MGEEGQVIACHKQSEWEALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHSGVM 60

Query: 61  FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTS 120
           F+KVDVDELN +A+EW+I AMPTFVF+K GETVHKIVGAD++ALLKKIEELKT T A  +
Sbjct: 61  FIKVDVDELNAIASEWKITAMPTFVFVKGGETVHKIVGADRAALLKKIEELKTSTTAAAT 120

Query: 121 STA 123
           STA
Sbjct: 121 STA 123

[Close]

BLAST of Csor.00g052840 vs. ExPASy TrEMBL
Match: K7NBX3 (Thioredoxin H OS=Siraitia grosvenorii OX=190515 PE=2 SV=1)

HSP 1 Score: 185 bits (469), Expect = 3.09e-58
Identity = 88/118 (74.58%), Postives = 97/118 (82.20%), Query Frame = 0


Query: 1   MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVV 60
           MAEEGQVI CHK AEW   + K KESGKLIVVDFTASWCGPCR IAP F+ELAKN+P V+
Sbjct: 1   MAEEGQVIPCHKVAEWKEQIEKGKESGKLIVVDFTASWCGPCRAIAPLFTELAKNNPNVI 60

Query: 61  FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAAT 118
           FLKVDVDELNTVA+EWEINAMPTFVF+K G+ +HKIVGADK  L  K+EE K    AT
Sbjct: 61  FLKVDVDELNTVASEWEINAMPTFVFLKEGKVLHKIVGADKVGLASKLEEYKNSAPAT 118

[Close]

BLAST of Csor.00g052840 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 144.4 bits (363), Expect = 5.9e-35
Identity = 69/117 (58.97%), Postives = 84/117 (71.79%), Query Frame = 0


Query: 1   MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVV 60
           MA EG+VIACH   +W   L  A ES KLIV+DFTA+WC PCR IAP F++LAK H  VV
Sbjct: 1   MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVV 60

Query: 61  FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAA 118
           F KVDVDELNTVA E+++ AMPTF+FMK GE    +VGA K  ++  +E+ KT  AA
Sbjct: 61  FFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKTVVAA 117

[Close]

BLAST of Csor.00g052840 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 142.5 bits (358), Expect = 2.2e-34
Identity = 65/107 (60.75%), Postives = 80/107 (74.77%), Query Frame = 0


Query: 2   AEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVF 61
           +EEGQVIACH    W+  L KA ES  L+VVDFTASWCGPCR IAP+F++LAK  P V+F
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLF 62

Query: 62  LKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKI 109
           LKVD DEL +VA++W I AMPTF+F+K G+ + K+VGA K  L   I
Sbjct: 63  LKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTI 109

[Close]

BLAST of Csor.00g052840 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 135.6 bits (340), Expect = 2.7e-32
Identity = 67/108 (62.04%), Postives = 77/108 (71.30%), Query Frame = 0


Query: 2   AEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNH-PGVV 61
           AEEGQVI CH    W   L KAKES KLIV+DFTASWC PCR IAP F++LAK      +
Sbjct: 3   AEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAI 62

Query: 62  FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKI 109
           F KVDVDEL +VA E+ + AMPTFVF+K GE V K+VGA+K  L  KI
Sbjct: 63  FFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKI 110

[Close]

BLAST of Csor.00g052840 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 132.5 bits (332), Expect = 2.3e-31
Identity = 61/108 (56.48%), Postives = 77/108 (71.30%), Query Frame = 0


Query: 1   MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVV 60
           MA EG+VIACH    W+  +  A ES KLIV+DFTASWC PCR IAP F+E+AK    VV
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVV 60

Query: 61  FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKI 109
           F K+DVDEL  VA E+++ AMPTFVFMK G  + ++VGA K  + +K+
Sbjct: 61  FFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKL 108

[Close]

BLAST of Csor.00g052840 vs. TAIR 10
Match: AT3G17880.1 (tetraticopeptide domain-containing thioredoxin )

HSP 1 Score: 119.0 bits (297), Expect = 2.7e-27
Identity = 51/107 (47.66%), Postives = 78/107 (72.90%), Query Frame = 0


Query: 4   EGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLK 63
           +G+VI+ H  +E +A    AK++ +L+++ FTA+WCGPCR ++P +S LA  H  VVFLK
Sbjct: 269 DGEVISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQHSRVVFLK 328

Query: 64  VDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEE 111
           VD+D+ N VA  W I+++PTF F++ G+ V K+VGADK +L +KI +
Sbjct: 329 VDIDKANDVAASWNISSVPTFCFIRDGKEVDKVVGADKGSLEQKIAQ 375

The following BLAST results are available for this feature:

BLAST of Csor.00g052840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96419	9.8e-35	63.89	Thioredoxin H-type OS=Fagopyrum esculentum OX=3617 PE=3 SV=1	[more]
Q0D840	6.4e-34	58.33	Thioredoxin H1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRXH PE=1 SV=1	[more]
A2YIW7	6.4e-34	58.33	Thioredoxin H-type OS=Oryza sativa subsp. indica OX=39946 GN=TRXH PE=1 SV=1	[more]
Q42403	8.3e-34	58.97	Thioredoxin H3 OS=Arabidopsis thaliana OX=3702 GN=TRX3 PE=1 SV=1	[more]
P29448	3.2e-33	60.75	Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1	[more]

BLAST of Csor.00g052840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022951328.1	6.67e-83	100.00	thioredoxin H-type-like [Cucurbita moschata] >KAG6585569.1 hypothetical protein ...	[more]
XP_023002551.1	2.16e-81	100.00	thioredoxin H-type-like [Cucurbita maxima]	[more]
XP_023537338.1	1.25e-80	99.17	thioredoxin H-type-like [Cucurbita pepo subsp. pepo]	[more]
KAG7020483.1	1.02e-77	85.42	hypothetical protein SDJN02_17168 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038886211.1	8.81e-72	88.33	thioredoxin H-type-like [Benincasa hispida]	[more]

BLAST of Csor.00g052840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GHE8	3.23e-83	100.00	thioredoxin H-type-like OS=Cucurbita moschata OX=3662 GN=LOC111454193 PE=4 SV=1	[more]
A0A6J1KLL7	1.05e-81	100.00	thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111496363 PE=4 SV=1	[more]
A0A1S3BB48	1.43e-70	85.83	thioredoxin H1-like OS=Cucumis melo OX=3656 GN=LOC103488007 PE=4 SV=1	[more]
A0A0A0LRK2	1.16e-67	81.30	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G362490...	[more]
K7NBX3	3.09e-58	74.58	Thioredoxin H OS=Siraitia grosvenorii OX=190515 PE=2 SV=1	[more]

BLAST of Csor.00g052840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42980.1	5.9e-35	58.97	thioredoxin 3	[more]
AT3G51030.1	2.2e-34	60.75	thioredoxin H-type 1	[more]
AT1G19730.1	2.7e-32	62.04	Thioredoxin superfamily protein	[more]
AT1G45145.1	2.3e-31	56.48	thioredoxin H-type 5	[more]
AT3G17880.1	2.7e-27	47.66	tetraticopeptide domain-containing thioredoxin	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 38..47 score: 64.89 coord: 77..88 score: 32.96 coord: 30..38 score: 53.21
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..117 e-value: 6.4E-42 score: 144.4
None	No IPR available	PANTHER	PTHR10438:SF431	THIOREDOXIN	coord: 1..113
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 1..113
None	No IPR available	CDD	cd02947	TRX_family	coord: 18..109 e-value: 9.2523E-35 score: 113.422
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 8..109 e-value: 3.7E-28 score: 97.5
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..113 score: 14.401336
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 31..49
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 5..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g052840.m01	Csor.00g052840.m01	mRNA