Csor.00g052680 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g052680
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCsor_Chr12: 2549061 .. 2550679 (+)
RNA-Seq ExpressionCsor.00g052680
SyntenyCsor.00g052680
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAAAGCGAGTTTTATGAGAGTTTGGAGCAGCTCAAGAAAGAGGCTAATGCCTCTCCCAGTGGTGCAGAGGAGGCTGCATCTGTTGAGAAATCCGAGCCTGTTTCTATTCCCAAGAGGCGAGGGAAGATCAAGTACAAGATTTATGGTCTTCATTTATCTGATCCCAAGTGGAGCGAAGTAGCAGACAAAATCCACGACGCAGAGGAGGTGATATGGCCTCAAGAACCAAAGCCAATTTCTGGGAAATGCAAATTGATCACAGAGAGAATTCTTTCACTAAACGAGAACGATGACCCATCTCCATTAATGGCTGAATGGACAGAGCTTCTTCAACCTACTAGGATTGACTGGATTACCTTACTTGATAAATTGAATGATAAGAACAGATTCTTATACTTGAAGGTAAGAAATCTCTCTTATTCTTCCCCTTTTGCCTTGTGTTCTTGGATAATTCTTGTTCTCAGTTTCATATTTAAACAGGGTAGAAGAAGCTGCATTTATAATCTCTTGGTTCCTTTTGTTTTGAATGTCATATACATAGAATATGCCATAGATTTTGAGTTCTGAAATAGCAACAAGCTTTAGATTTCTGGCGCTATGCATGAGTGGTGTTAAGGTGTTTATCAATGATAATACTTTCTCTACACCACATTAGATAGAACGACATAATGTTTGCAATTTGCAAGACCCTGATTTGAATTTGTTGATTATGATGAATGAAGGTAGCAGAGCTTCTTTTGAATGAAGAATCGTTCGAGACCAACATCCGTGACTACTCTAAGCTTGTCGATGTCCATGCTAAAGAGAATCGTCTAGAGGATGCTGAGAGGATTCTTAAGATGATGAATGAGAAAGGCCTTACACCGGACATTTTAACAGCCACAGTTTTGGTTCATATGTATAGCAAGGTGGGAAATCTCGATCGTGCAAAGGAAGCGTTTGATACATTGAGGAGTCACGGCTTCCAACCCGATGAGAAGGTTTATAATTCCATGATAATGGCGTTTGTGAACGCTGGACAACCGAAGTTGGGCGAATCGATGATGAGAGAAATGGAAGCAAGGGACATTAAACCAAGCAAGGATATTTACATGGCATTGCTAAGGTCATTTTCGCAACGTGGTGATATCAGTGGCGCTGGAAGAATTGCTGCAACGATGCAATTTTCTGGCATCTCGCCAAGTTTGGAGTCGTGTATATTACTAGTTGAGACATATGGGCTAGCTGGTGATCCTGATCAGGCAAGGAACAATTTTGACTACATGATAAAAATCGGGCACAGGCCTGATGCCAGGTGCACTGCAAGTATGGTTGCAGCCTATGGAAAGAAGAACCTGTTGGACAAGGCTCTGAATCTTTTACTACAGCTTGAAAAGAATGGGTTTGAGCCAGGGGTTGAAACTTATGCTGCTCTTGTAGATTGGTTAGGTAAGTTGCAGCTGGTTGACGAAGCTGAGCAGCTATTAGGCAAGATCGGCGCGCACAGGGAGATGTCATGCCTCTTAAGGTTCATATTAGCCTCTGTGATATGTACTCAAGAGCTGGGGTCGAGAAAAAGGCGCTACCAGCGCTCGGGGTATTGTTATAGCTGGTGGCTTTGTGCAGGATGCTAA

mRNA sequence

ATGGAGGAAAGCGAGTTTTATGAGAGTTTGGAGCAGCTCAAGAAAGAGGCTAATGCCTCTCCCAGTGGTGCAGAGGAGGCTGCATCTGTTGAGAAATCCGAGCCTGTTTCTATTCCCAAGAGGCGAGGGAAGATCAAGTACAAGATTTATGGTCTTCATTTATCTGATCCCAAGTGGAGCGAAGTAGCAGACAAAATCCACGACGCAGAGGAGGTGATATGGCCTCAAGAACCAAAGCCAATTTCTGGGAAATGCAAATTGATCACAGAGAGAATTCTTTCACTAAACGAGAACGATGACCCATCTCCATTAATGGCTGAATGGACAGAGCTTCTTCAACCTACTAGGATTGACTGGATTACCTTACTTGATAAATTGAATGATAAGAACAGATTCTTATACTTGAAGGTAGCAGAGCTTCTTTTGAATGAAGAATCGTTCGAGACCAACATCCGTGACTACTCTAAGCTTGTCGATGTCCATGCTAAAGAGAATCGTCTAGAGGATGCTGAGAGGATTCTTAAGATGATGAATGAGAAAGGCCTTACACCGGACATTTTAACAGCCACAGTTTTGGTTCATATGTATAGCAAGGTGGGAAATCTCGATCGTGCAAAGGAAGCGTTTGATACATTGAGGAGTCACGGCTTCCAACCCGATGAGAAGGTTTATAATTCCATGATAATGGCGTTTGTGAACGCTGGACAACCGAAGTTGGGCGAATCGATGATGAGAGAAATGGAAGCAAGGGACATTAAACCAAGCAAGGATATTTACATGGCATTGCTAAGGTCATTTTCGCAACGTGGTGATATCAGTGGCGCTGGAAGAATTGCTGCAACGATGCAATTTTCTGGCATCTCGCCAAGTTTGGAGTCGTGTATATTACTAGTTGAGACATATGGGCTAGCTGGTGATCCTGATCAGGCAAGGAACAATTTTGACTACATGATAAAAATCGGGCACAGGCCTGATGCCAGGTGCACTGCAAGTATGGTTGCAGCCTATGGAAAGAAGAACCTGTTGGACAAGGCTCTGAATCTTTTACTACAGCTTGAAAAGAATGGGTTTGAGCCAGGGGTTGAAACTTATGCTGCTCTTGTAGATTGGTTAGGTAAGTTGCAGCTGGTTGACGAAGCTGAGCAGCTATTAGGCAAGATCGGCGCGCACAGGGAGATGTCATGCCTCTTAAGGTTCATATTAGCCTCTGTGATATGTACTCAAGAGCTGGGGTCGAGAAAAAGGCGCTACCAGCGCTCGGGGTATTGTTATAGCTGGTGGCTTTGTGCAGGATGCTAA

Coding sequence (CDS)

ATGGAGGAAAGCGAGTTTTATGAGAGTTTGGAGCAGCTCAAGAAAGAGGCTAATGCCTCTCCCAGTGGTGCAGAGGAGGCTGCATCTGTTGAGAAATCCGAGCCTGTTTCTATTCCCAAGAGGCGAGGGAAGATCAAGTACAAGATTTATGGTCTTCATTTATCTGATCCCAAGTGGAGCGAAGTAGCAGACAAAATCCACGACGCAGAGGAGGTGATATGGCCTCAAGAACCAAAGCCAATTTCTGGGAAATGCAAATTGATCACAGAGAGAATTCTTTCACTAAACGAGAACGATGACCCATCTCCATTAATGGCTGAATGGACAGAGCTTCTTCAACCTACTAGGATTGACTGGATTACCTTACTTGATAAATTGAATGATAAGAACAGATTCTTATACTTGAAGGTAGCAGAGCTTCTTTTGAATGAAGAATCGTTCGAGACCAACATCCGTGACTACTCTAAGCTTGTCGATGTCCATGCTAAAGAGAATCGTCTAGAGGATGCTGAGAGGATTCTTAAGATGATGAATGAGAAAGGCCTTACACCGGACATTTTAACAGCCACAGTTTTGGTTCATATGTATAGCAAGGTGGGAAATCTCGATCGTGCAAAGGAAGCGTTTGATACATTGAGGAGTCACGGCTTCCAACCCGATGAGAAGGTTTATAATTCCATGATAATGGCGTTTGTGAACGCTGGACAACCGAAGTTGGGCGAATCGATGATGAGAGAAATGGAAGCAAGGGACATTAAACCAAGCAAGGATATTTACATGGCATTGCTAAGGTCATTTTCGCAACGTGGTGATATCAGTGGCGCTGGAAGAATTGCTGCAACGATGCAATTTTCTGGCATCTCGCCAAGTTTGGAGTCGTGTATATTACTAGTTGAGACATATGGGCTAGCTGGTGATCCTGATCAGGCAAGGAACAATTTTGACTACATGATAAAAATCGGGCACAGGCCTGATGCCAGGTGCACTGCAAGTATGGTTGCAGCCTATGGAAAGAAGAACCTGTTGGACAAGGCTCTGAATCTTTTACTACAGCTTGAAAAGAATGGGTTTGAGCCAGGGGTTGAAACTTATGCTGCTCTTGTAGATTGGTTAGGTAAGTTGCAGCTGGTTGACGAAGCTGAGCAGCTATTAGGCAAGATCGGCGCGCACAGGGAGATGTCATGCCTCTTAAGGTTCATATTAGCCTCTGTGATATGTACTCAAGAGCTGGGGTCGAGAAAAAGGCGCTACCAGCGCTCGGGGTATTGTTATAGCTGGTGGCTTTGTGCAGGATGCTAA

Protein sequence

MEESEFYESLEQLKKEANASPSGAEEAASVEKSEPVSIPKRRGKIKYKIYGLHLSDPKWSEVADKIHDAEEVIWPQEPKPISGKCKLITERILSLNENDDPSPLMAEWTELLQPTRIDWITLLDKLNDKNRFLYLKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVNAGQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGAHREMSCLLRFILASVICTQELGSRKRRYQRSGYCYSWWLCAGC
Homology
BLAST of Csor.00g052680 vs. ExPASy Swiss-Prot
Match: Q940Z1 (Pentatricopeptide repeat-containing protein At1g19525 OS=Arabidopsis thaliana OX=3702 GN=At1g19525 PE=2 SV=2)

HSP 1 Score: 253.8 bits (647), Expect = 3.4e-66
Identity = 121/212 (57.08%), Postives = 166/212 (78.30%), Query Frame = 0

Query: 177 MNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVNAGQ 236
           M++ G+ PDILTAT LVHMYSK GN +RA EAF+ L+S+G +PDEK+Y +MI+ +VNAG+
Sbjct: 1   MSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGK 60

Query: 237 PKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISP-SLESCI 296
           PKLGE +M+EM+A+++K S+++YMALLR+++Q GD +GA  I+++MQ++   P S E+  
Sbjct: 61  PKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYS 120

Query: 297 LLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKKNLLDKALNLLLQLEKN 356
           L VE YG AG  D+A++NFD M K+GH+PD +C A++V AY  +N LDKAL LLLQLEK+
Sbjct: 121 LFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKD 180

Query: 357 GFEPGVETYAALVDWLGKLQLVDEAEQLLGKI 388
           G E GV TY  LVDW+  L L++EAEQLL KI
Sbjct: 181 GIEIGVITYTVLVDWMANLGLIEEAEQLLVKI 212

BLAST of Csor.00g052680 vs. ExPASy Swiss-Prot
Match: Q9LPC4 (Pentatricopeptide repeat-containing protein At1g01970 OS=Arabidopsis thaliana OX=3702 GN=At1g01970 PE=2 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 9.0e-59
Identity = 119/327 (36.39%), Postives = 194/327 (59.33%), Query Frame = 0

Query: 59  WSEVADKIHDAEEVIWPQEPKPISGKCKLITERILSLN-ENDDPSPLMAEWTELLQPTRI 118
           W++V   + + ++    + P  +S +C+ +  +I+  + E      L+  W   + P R 
Sbjct: 72  WADVGLNLTEEQDEAITRIPIKMSKRCQALMRQIICFSPEKGSFCDLLGAWLRRMNPIRA 131

Query: 119 DWITLLDKLNDKNRFLYLKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMM 178
           DW+++L +L + +   Y+KVAE  L ++SFE N RDY+K++  + K N++EDAER L  M
Sbjct: 132 DWLSILKELKNLDSPFYIKVAEFSLLQDSFEANARDYTKIIHYYGKLNQVEDAERTLLSM 191

Query: 179 NEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVNAGQP 238
             +G   D +T T +V +YSK G    A+E F+ ++  G   D + Y SMIMA++ AG P
Sbjct: 192 KNRGFLIDQVTLTAMVQLYSKAGCHKLAEETFNEIKLLGEPLDYRSYGSMIMAYIRAGVP 251

Query: 239 KLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILL 298
           + GES++REM++++I   +++Y ALLR +S  GD  GA R+   +Q +GI+P ++ C LL
Sbjct: 252 EKGESLLREMDSQEICAGREVYKALLRDYSMGGDAEGAKRVFDAVQIAGITPDVKLCGLL 311

Query: 299 VETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKKNLLDKALNLLLQLEKNGF 358
           +  Y ++G    AR  F+ M K G +   +C A ++AAY K+  L++AL  L++LEK+  
Sbjct: 312 INAYSVSGQSQNARLAFENMRKAGIKATDKCVALVLAAYEKEEKLNEALGFLVELEKDSI 371

Query: 359 EPGVETYAALVDWLGKLQLVDEAEQLL 385
             G E  A L  W  KL +V+E E LL
Sbjct: 372 MLGKEASAVLAQWFKKLGVVEEVELLL 398

BLAST of Csor.00g052680 vs. ExPASy Swiss-Prot
Match: Q8LEZ4 (Protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD5 PE=2 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 4.8e-36
Identity = 78/147 (53.06%), Postives = 104/147 (70.75%), Query Frame = 0

Query: 1   MEESEFYESLEQLK------KEANASPSGAEEAASVE----KSEPVSIPKRRGKIKYKIY 60
           M+++EFYESLEQ +      +E+       EE   V     +S  +S+PKR+GK+KYKIY
Sbjct: 224 MDDAEFYESLEQQRDLDNSIRESETVDGEVEEEGFVPSDEVESRSISLPKRKGKLKYKIY 283

Query: 61  GLHLSDPKWSEVADKIHDAEEVIWPQEPKPISGKCKLITERILSLNENDDPSPLMAEWTE 120
           GL LSDPKW E+ADKIH+AEE    +EPKP++GKCKL+ E++ SL E DDPS L+AEW E
Sbjct: 284 GLELSDPKWVEMADKIHEAEEEADWREPKPVTGKCKLVMEKLESLQEGDDPSGLLAEWAE 343

Query: 121 LLQPTRIDWITLLDKLNDKNRFLYLKV 138
           LL+P R+DWI L+++L + N   YLKV
Sbjct: 344 LLEPNRVDWIALINQLREGNTHAYLKV 370

BLAST of Csor.00g052680 vs. ExPASy Swiss-Prot
Match: Q9T0D6 (Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana OX=3702 GN=At4g11690 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 6.5e-25
Identity = 66/246 (26.83%), Postives = 124/246 (50.41%), Query Frame = 0

Query: 142 LNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGN 201
           + E     NI  Y+ L+    +E +L +A +++  M   G+ P+++T   L+  +  VG 
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353

Query: 202 LDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVNAGQPKLGESMMREMEARDIKPSKDIYMA 261
           L +A      L+S G  P    YN ++  F   G       M++EME R IKPSK  Y  
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413

Query: 262 LLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIG 321
           L+ +F++  ++  A ++  +M+  G+ P + +  +L+  + + G  ++A   F  M++  
Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473

Query: 322 HRPDARCTASMVAAYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAE 381
             P+     +M+  Y K+    +AL LL ++E+    P V +Y  +++ L K +   EAE
Sbjct: 474 CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAE 533

Query: 382 QLLGKI 388
           +L+ K+
Sbjct: 534 RLVEKM 539

BLAST of Csor.00g052680 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 5.5e-24
Identity = 69/250 (27.60%), Postives = 124/250 (49.60%), Query Frame = 0

Query: 140 LLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKV 199
           LL+  + +  ++  YS +V+ + +   L+   +++++M  KGL P+      ++ +  ++
Sbjct: 270 LLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRI 329

Query: 200 GNLDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVNAGQPKLGESMMREMEARDIKPSKDIY 259
             L  A+EAF  +   G  PD  VY ++I  F   G  +       EM +RDI P    Y
Sbjct: 330 CKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 389

Query: 260 MALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIK 319
            A++  F Q GD+  AG++   M   G+ P   +   L+  Y  AG    A    ++MI+
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449

Query: 320 IGHRPDARCTASMVAAYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDE 379
            G  P+     +++    K+  LD A  LL ++ K G +P + TY ++V+ L K   ++E
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 509

Query: 380 AEQLLGKIGA 390
           A +L+G+  A
Sbjct: 510 AVKLVGEFEA 519

BLAST of Csor.00g052680 vs. NCBI nr
Match: KAG6585585.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 857 bits (2215), Expect = 9.60e-314
Identity = 432/432 (100.00%), Postives = 432/432 (100.00%), Query Frame = 0

Query: 1   MEESEFYESLEQLKKEANASPSGAEEAASVEKSEPVSIPKRRGKIKYKIYGLHLSDPKWS 60
           MEESEFYESLEQLKKEANASPSGAEEAASVEKSEPVSIPKRRGKIKYKIYGLHLSDPKWS
Sbjct: 1   MEESEFYESLEQLKKEANASPSGAEEAASVEKSEPVSIPKRRGKIKYKIYGLHLSDPKWS 60

Query: 61  EVADKIHDAEEVIWPQEPKPISGKCKLITERILSLNENDDPSPLMAEWTELLQPTRIDWI 120
           EVADKIHDAEEVIWPQEPKPISGKCKLITERILSLNENDDPSPLMAEWTELLQPTRIDWI
Sbjct: 61  EVADKIHDAEEVIWPQEPKPISGKCKLITERILSLNENDDPSPLMAEWTELLQPTRIDWI 120

Query: 121 TLLDKLNDKNRFLYLKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEK 180
           TLLDKLNDKNRFLYLKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEK
Sbjct: 121 TLLDKLNDKNRFLYLKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEK 180

Query: 181 GLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVNAGQPKLG 240
           GLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVNAGQPKLG
Sbjct: 181 GLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVNAGQPKLG 240

Query: 241 ESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVET 300
           ESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVET
Sbjct: 241 ESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVET 300

Query: 301 YGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKKNLLDKALNLLLQLEKNGFEPG 360
           YGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKKNLLDKALNLLLQLEKNGFEPG
Sbjct: 301 YGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKKNLLDKALNLLLQLEKNGFEPG 360

Query: 361 VETYAALVDWLGKLQLVDEAEQLLGKIGAHREMSCLLRFILASVICTQELGSRKRRYQRS 420
           VETYAALVDWLGKLQLVDEAEQLLGKIGAHREMSCLLRFILASVICTQELGSRKRRYQRS
Sbjct: 361 VETYAALVDWLGKLQLVDEAEQLLGKIGAHREMSCLLRFILASVICTQELGSRKRRYQRS 420

Query: 421 GYCYSWWLCAGC 432
           GYCYSWWLCAGC
Sbjct: 421 GYCYSWWLCAGC 432

BLAST of Csor.00g052680 vs. NCBI nr
Match: XP_023002246.1 (putative pentatricopeptide repeat-containing protein At2g02150 [Cucurbita maxima])

HSP 1 Score: 743 bits (1918), Expect = 4.60e-264
Identity = 379/390 (97.18%), Postives = 382/390 (97.95%), Query Frame = 0

Query: 1   MEESEFYESLEQLKKEANASPSGAEEAASVEKSEPVSIPKRRGKIKYKIYGLHLSDPKWS 60
           MEESEFYESLEQLKKEANASPSGAE AASVEKSEPVSIPKRRGKIKYKIYGL LSDPKWS
Sbjct: 230 MEESEFYESLEQLKKEANASPSGAEAAASVEKSEPVSIPKRRGKIKYKIYGLDLSDPKWS 289

Query: 61  EVADKIHDAEEVIWPQEPKPISGKCKLITERILSLNENDDPSPLMAEWTELLQPTRIDWI 120
           EVADKIH+AEEVIWPQEPKPISGKCKLITERILSLNENDDPSPLMAEWT LLQPTRIDWI
Sbjct: 290 EVADKIHEAEEVIWPQEPKPISGKCKLITERILSLNENDDPSPLMAEWTGLLQPTRIDWI 349

Query: 121 TLLDKLNDKNRFLYLKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEK 180
            LLDKLNDKNRFLYLKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMM EK
Sbjct: 350 ALLDKLNDKNRFLYLKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMTEK 409

Query: 181 GLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVNAGQPKLG 240
           G+TPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVNAGQPKLG
Sbjct: 410 GITPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVNAGQPKLG 469

Query: 241 ESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVET 300
           ESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESC LLVET
Sbjct: 470 ESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCTLLVET 529

Query: 301 YGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKKNLLDKALNLLLQLEKNGFEPG 360
           YGLAGDPDQARNNFDYMIKIGHRPD RCTASMVAAYGKKNLLDKALNLLLQLEK+GFEPG
Sbjct: 530 YGLAGDPDQARNNFDYMIKIGHRPDDRCTASMVAAYGKKNLLDKALNLLLQLEKDGFEPG 589

Query: 361 VETYAALVDWLGKLQLVDEAEQLLGKIGAH 390
           VETYAALVDWLGKLQLVDEAEQLLGKIGA 
Sbjct: 590 VETYAALVDWLGKLQLVDEAEQLLGKIGAQ 619

BLAST of Csor.00g052680 vs. NCBI nr
Match: XP_022951668.1 (pentatricopeptide repeat-containing protein At1g19525-like [Cucurbita moschata])

HSP 1 Score: 730 bits (1885), Expect = 9.52e-263
Identity = 374/393 (95.17%), Postives = 381/393 (96.95%), Query Frame = 0

Query: 1   MEESEFYESLEQLKKEANASPSGAEEAASVEKSEPVSIPKRRGKIKYKIYGLHLSDPKWS 60
           MEESEFYESLEQL K ANASPSGAEEAASVE SEPVSIPKRRGKIK KIYGL LSDPKWS
Sbjct: 1   MEESEFYESLEQLTKGANASPSGAEEAASVENSEPVSIPKRRGKIKCKIYGLDLSDPKWS 60

Query: 61  EVADKIHDAEEVIWPQEPKPISGKCKLITERILSLNENDDPSPLMAEWTELLQPTRIDWI 120
           EVADKIH+AEEVIWPQEPKPISGKCKLITERILSLNENDDPSPLMAEWTELLQPTRIDWI
Sbjct: 61  EVADKIHEAEEVIWPQEPKPISGKCKLITERILSLNENDDPSPLMAEWTELLQPTRIDWI 120

Query: 121 TLLDKLNDKNRFLYLKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEK 180
           TLLDKLNDKNRFLYLKVA+LLLNEE FETNIRDYSKLVDVHAKENRLEDAERILKMM+EK
Sbjct: 121 TLLDKLNDKNRFLYLKVAQLLLNEEPFETNIRDYSKLVDVHAKENRLEDAERILKMMDEK 180

Query: 181 GLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVNAGQPKLG 240
           G+TPDILTATVLVHMYSKVGNLDRAKEAFDTLRS GFQPDEKVYNSMIMAFVNAGQPKLG
Sbjct: 181 GITPDILTATVLVHMYSKVGNLDRAKEAFDTLRSIGFQPDEKVYNSMIMAFVNAGQPKLG 240

Query: 241 ESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVET 300
           ESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVET
Sbjct: 241 ESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVET 300

Query: 301 YGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKKNLLDKALNLLLQLEKNGFEPG 360
           YGLAGDPDQARNNFDYMIKIGHRPD  CTASMVAAYG KNLLDKALNLLLQLEK+GFEPG
Sbjct: 301 YGLAGDPDQARNNFDYMIKIGHRPDDSCTASMVAAYGTKNLLDKALNLLLQLEKDGFEPG 360

Query: 361 VETYAALVDWLGKLQLVDEAEQLLGKIGAHREM 393
           VETYAALVDWLGKLQLVDEAEQLLGKIGA  ++
Sbjct: 361 VETYAALVDWLGKLQLVDEAEQLLGKIGAQGDV 393

BLAST of Csor.00g052680 vs. NCBI nr
Match: XP_022996674.1 (putative pentatricopeptide repeat-containing protein At2g02150 [Cucurbita maxima])

HSP 1 Score: 688 bits (1775), Expect = 2.81e-242
Identity = 348/396 (87.88%), Postives = 370/396 (93.43%), Query Frame = 0

Query: 1   MEESEFYESLEQLKKEA------NASPSGAEEAASVEKSEPVSIPKRRGKIKYKIYGLHL 60
           MEESEFYESLEQLKKEA      N SPS  E+A+ V KSE VS+PKRRGKIKYKIYGL L
Sbjct: 230 MEESEFYESLEQLKKEACTQEENNDSPSSVEDASEV-KSEAVSLPKRRGKIKYKIYGLDL 289

Query: 61  SDPKWSEVADKIHDAEEVIWPQEPKPISGKCKLITERILSLNENDDPSPLMAEWTELLQP 120
           SDPKWSEVADK+H+AEEV+WPQEPKPISGKCKL+TERI SLN+N+DPSPL+AEW +LLQP
Sbjct: 290 SDPKWSEVADKVHEAEEVLWPQEPKPISGKCKLVTERIFSLNDNEDPSPLLAEWKDLLQP 349

Query: 121 TRIDWITLLDKLNDKNRFLYLKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERIL 180
           TR+DWITLLDKLN+ NRFLYLKVAELLL+EESF+TNIRDYSKLVDVHAKENRLEDAERIL
Sbjct: 350 TRVDWITLLDKLNESNRFLYLKVAELLLSEESFQTNIRDYSKLVDVHAKENRLEDAERIL 409

Query: 181 KMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVNA 240
           K MNEKG+TPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVN+
Sbjct: 410 KKMNEKGITPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVNS 469

Query: 241 GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESC 300
           GQPKLGES+MREMEARDIKPSKDIYMALLRSFSQRGDISGAGRI+ATMQF+G SPSLESC
Sbjct: 470 GQPKLGESLMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRISATMQFAGFSPSLESC 529

Query: 301 ILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKKNLLDKALNLLLQLEK 360
            LLVE YG AGDPDQARNNFDYMIKIGHRPD RCTASMVAAY KKNLLDKALNLLLQLEK
Sbjct: 530 TLLVEAYGQAGDPDQARNNFDYMIKIGHRPDDRCTASMVAAYEKKNLLDKALNLLLQLEK 589

Query: 361 NGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGAH 390
           +GFEPGV TYA LVDWLGKLQLVDEAEQ+LGKIGA 
Sbjct: 590 DGFEPGVATYAVLVDWLGKLQLVDEAEQILGKIGAQ 624

BLAST of Csor.00g052680 vs. NCBI nr
Match: KAG6598456.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 682 bits (1760), Expect = 2.81e-241
Identity = 345/396 (87.12%), Postives = 369/396 (93.18%), Query Frame = 0

Query: 1   MEESEFYESLEQLKKEA------NASPSGAEEAASVEKSEPVSIPKRRGKIKYKIYGLHL 60
           MEESEFYESLEQLKKEA      N SPS  E A+ V KSE VS+PKRRGKIKYKIYGL L
Sbjct: 145 MEESEFYESLEQLKKEACTQEENNDSPSSVEAASEV-KSEAVSLPKRRGKIKYKIYGLDL 204

Query: 61  SDPKWSEVADKIHDAEEVIWPQEPKPISGKCKLITERILSLNENDDPSPLMAEWTELLQP 120
           SDPKWSEVADK+H+AEEV+WPQEPKPISGKCKL+TERILSLN+N+DPSPL+AEW +LLQP
Sbjct: 205 SDPKWSEVADKVHEAEEVLWPQEPKPISGKCKLVTERILSLNDNEDPSPLLAEWKDLLQP 264

Query: 121 TRIDWITLLDKLNDKNRFLYLKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERIL 180
           TR+DWI LLDKLN+ NRFLYLKVAELLL+EESF+T+IRDYSKLVDVHAKENRLEDAERIL
Sbjct: 265 TRVDWIALLDKLNESNRFLYLKVAELLLSEESFQTDIRDYSKLVDVHAKENRLEDAERIL 324

Query: 181 KMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVNA 240
           K MNEKG+TPDILTA+VLVHMYSKVGNLDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVNA
Sbjct: 325 KKMNEKGITPDILTASVLVHMYSKVGNLDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVNA 384

Query: 241 GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESC 300
           GQPKLGES+MREMEARDIKPS+DIYMALLRSFSQRGDISGAGRI+ATMQF+G SPSLESC
Sbjct: 385 GQPKLGESLMREMEARDIKPSQDIYMALLRSFSQRGDISGAGRISATMQFAGFSPSLESC 444

Query: 301 ILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKKNLLDKALNLLLQLEK 360
            LL+E YG AGDPDQARNNFDYMIKIGHRPD RCTASMVAAY KKNLLDKALNLLLQLEK
Sbjct: 445 TLLIEAYGQAGDPDQARNNFDYMIKIGHRPDDRCTASMVAAYEKKNLLDKALNLLLQLEK 504

Query: 361 NGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGAH 390
           +GFEPGV TYA LVDWLGKLQLVDEAEQ+LGKIGA 
Sbjct: 505 DGFEPGVATYAVLVDWLGKLQLVDEAEQMLGKIGAQ 539

BLAST of Csor.00g052680 vs. ExPASy TrEMBL
Match: A0A6J1KKS4 (putative pentatricopeptide repeat-containing protein At2g02150 OS=Cucurbita maxima OX=3661 GN=LOC111496154 PE=3 SV=1)

HSP 1 Score: 743 bits (1918), Expect = 2.23e-264
Identity = 379/390 (97.18%), Postives = 382/390 (97.95%), Query Frame = 0

Query: 1   MEESEFYESLEQLKKEANASPSGAEEAASVEKSEPVSIPKRRGKIKYKIYGLHLSDPKWS 60
           MEESEFYESLEQLKKEANASPSGAE AASVEKSEPVSIPKRRGKIKYKIYGL LSDPKWS
Sbjct: 230 MEESEFYESLEQLKKEANASPSGAEAAASVEKSEPVSIPKRRGKIKYKIYGLDLSDPKWS 289

Query: 61  EVADKIHDAEEVIWPQEPKPISGKCKLITERILSLNENDDPSPLMAEWTELLQPTRIDWI 120
           EVADKIH+AEEVIWPQEPKPISGKCKLITERILSLNENDDPSPLMAEWT LLQPTRIDWI
Sbjct: 290 EVADKIHEAEEVIWPQEPKPISGKCKLITERILSLNENDDPSPLMAEWTGLLQPTRIDWI 349

Query: 121 TLLDKLNDKNRFLYLKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEK 180
            LLDKLNDKNRFLYLKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMM EK
Sbjct: 350 ALLDKLNDKNRFLYLKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMTEK 409

Query: 181 GLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVNAGQPKLG 240
           G+TPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVNAGQPKLG
Sbjct: 410 GITPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVNAGQPKLG 469

Query: 241 ESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVET 300
           ESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESC LLVET
Sbjct: 470 ESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCTLLVET 529

Query: 301 YGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKKNLLDKALNLLLQLEKNGFEPG 360
           YGLAGDPDQARNNFDYMIKIGHRPD RCTASMVAAYGKKNLLDKALNLLLQLEK+GFEPG
Sbjct: 530 YGLAGDPDQARNNFDYMIKIGHRPDDRCTASMVAAYGKKNLLDKALNLLLQLEKDGFEPG 589

Query: 361 VETYAALVDWLGKLQLVDEAEQLLGKIGAH 390
           VETYAALVDWLGKLQLVDEAEQLLGKIGA 
Sbjct: 590 VETYAALVDWLGKLQLVDEAEQLLGKIGAQ 619

BLAST of Csor.00g052680 vs. ExPASy TrEMBL
Match: A0A6J1GID4 (pentatricopeptide repeat-containing protein At1g19525-like OS=Cucurbita moschata OX=3662 GN=LOC111454412 PE=4 SV=1)

HSP 1 Score: 730 bits (1885), Expect = 4.61e-263
Identity = 374/393 (95.17%), Postives = 381/393 (96.95%), Query Frame = 0

Query: 1   MEESEFYESLEQLKKEANASPSGAEEAASVEKSEPVSIPKRRGKIKYKIYGLHLSDPKWS 60
           MEESEFYESLEQL K ANASPSGAEEAASVE SEPVSIPKRRGKIK KIYGL LSDPKWS
Sbjct: 1   MEESEFYESLEQLTKGANASPSGAEEAASVENSEPVSIPKRRGKIKCKIYGLDLSDPKWS 60

Query: 61  EVADKIHDAEEVIWPQEPKPISGKCKLITERILSLNENDDPSPLMAEWTELLQPTRIDWI 120
           EVADKIH+AEEVIWPQEPKPISGKCKLITERILSLNENDDPSPLMAEWTELLQPTRIDWI
Sbjct: 61  EVADKIHEAEEVIWPQEPKPISGKCKLITERILSLNENDDPSPLMAEWTELLQPTRIDWI 120

Query: 121 TLLDKLNDKNRFLYLKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEK 180
           TLLDKLNDKNRFLYLKVA+LLLNEE FETNIRDYSKLVDVHAKENRLEDAERILKMM+EK
Sbjct: 121 TLLDKLNDKNRFLYLKVAQLLLNEEPFETNIRDYSKLVDVHAKENRLEDAERILKMMDEK 180

Query: 181 GLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVNAGQPKLG 240
           G+TPDILTATVLVHMYSKVGNLDRAKEAFDTLRS GFQPDEKVYNSMIMAFVNAGQPKLG
Sbjct: 181 GITPDILTATVLVHMYSKVGNLDRAKEAFDTLRSIGFQPDEKVYNSMIMAFVNAGQPKLG 240

Query: 241 ESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVET 300
           ESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVET
Sbjct: 241 ESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVET 300

Query: 301 YGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKKNLLDKALNLLLQLEKNGFEPG 360
           YGLAGDPDQARNNFDYMIKIGHRPD  CTASMVAAYG KNLLDKALNLLLQLEK+GFEPG
Sbjct: 301 YGLAGDPDQARNNFDYMIKIGHRPDDSCTASMVAAYGTKNLLDKALNLLLQLEKDGFEPG 360

Query: 361 VETYAALVDWLGKLQLVDEAEQLLGKIGAHREM 393
           VETYAALVDWLGKLQLVDEAEQLLGKIGA  ++
Sbjct: 361 VETYAALVDWLGKLQLVDEAEQLLGKIGAQGDV 393

BLAST of Csor.00g052680 vs. ExPASy TrEMBL
Match: A0A6J1K9D9 (putative pentatricopeptide repeat-containing protein At2g02150 OS=Cucurbita maxima OX=3661 GN=LOC111491849 PE=4 SV=1)

HSP 1 Score: 688 bits (1775), Expect = 1.36e-242
Identity = 348/396 (87.88%), Postives = 370/396 (93.43%), Query Frame = 0

Query: 1   MEESEFYESLEQLKKEA------NASPSGAEEAASVEKSEPVSIPKRRGKIKYKIYGLHL 60
           MEESEFYESLEQLKKEA      N SPS  E+A+ V KSE VS+PKRRGKIKYKIYGL L
Sbjct: 230 MEESEFYESLEQLKKEACTQEENNDSPSSVEDASEV-KSEAVSLPKRRGKIKYKIYGLDL 289

Query: 61  SDPKWSEVADKIHDAEEVIWPQEPKPISGKCKLITERILSLNENDDPSPLMAEWTELLQP 120
           SDPKWSEVADK+H+AEEV+WPQEPKPISGKCKL+TERI SLN+N+DPSPL+AEW +LLQP
Sbjct: 290 SDPKWSEVADKVHEAEEVLWPQEPKPISGKCKLVTERIFSLNDNEDPSPLLAEWKDLLQP 349

Query: 121 TRIDWITLLDKLNDKNRFLYLKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERIL 180
           TR+DWITLLDKLN+ NRFLYLKVAELLL+EESF+TNIRDYSKLVDVHAKENRLEDAERIL
Sbjct: 350 TRVDWITLLDKLNESNRFLYLKVAELLLSEESFQTNIRDYSKLVDVHAKENRLEDAERIL 409

Query: 181 KMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVNA 240
           K MNEKG+TPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVN+
Sbjct: 410 KKMNEKGITPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVNS 469

Query: 241 GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESC 300
           GQPKLGES+MREMEARDIKPSKDIYMALLRSFSQRGDISGAGRI+ATMQF+G SPSLESC
Sbjct: 470 GQPKLGESLMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRISATMQFAGFSPSLESC 529

Query: 301 ILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKKNLLDKALNLLLQLEK 360
            LLVE YG AGDPDQARNNFDYMIKIGHRPD RCTASMVAAY KKNLLDKALNLLLQLEK
Sbjct: 530 TLLVEAYGQAGDPDQARNNFDYMIKIGHRPDDRCTASMVAAYEKKNLLDKALNLLLQLEK 589

Query: 361 NGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGAH 390
           +GFEPGV TYA LVDWLGKLQLVDEAEQ+LGKIGA 
Sbjct: 590 DGFEPGVATYAVLVDWLGKLQLVDEAEQILGKIGAQ 624

BLAST of Csor.00g052680 vs. ExPASy TrEMBL
Match: A0A6J1CRK9 (pentatricopeptide repeat-containing protein At5g39710 OS=Momordica charantia OX=3673 GN=LOC111013946 PE=3 SV=1)

HSP 1 Score: 685 bits (1767), Expect = 2.47e-241
Identity = 349/401 (87.03%), Postives = 370/401 (92.27%), Query Frame = 0

Query: 1   MEESEFYESLEQLKKEANA---------SPSGAEEAASVEKSEPVSIPKRRGKIKYKIYG 60
           MEESEFYESLEQLKKEA           SPSGAE A S EKSE VS+PKRRGKIKYKIYG
Sbjct: 230 MEESEFYESLEQLKKEAQENDVEGNNKDSPSGAE-AGSEEKSEVVSLPKRRGKIKYKIYG 289

Query: 61  LHLSDPKWSEVADKIHDAEEVIWPQEPKPISGKCKLITERILSLNENDDPSPLMAEWTEL 120
           L LSDPKW++VADKIH+AEEV+WPQEPKPISGKCKL+TERILSLNENDDPSPL+AEWTEL
Sbjct: 290 LDLSDPKWTKVADKIHEAEEVLWPQEPKPISGKCKLVTERILSLNENDDPSPLLAEWTEL 349

Query: 121 LQPTRIDWITLLDKLNDKNRFLYLKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAE 180
           LQPTRIDWITLLDKLN+KNRFLYLKVAEL+L+EESF+TNIRDYSKLVD HAKENRLEDAE
Sbjct: 350 LQPTRIDWITLLDKLNEKNRFLYLKVAELVLSEESFQTNIRDYSKLVDAHAKENRLEDAE 409

Query: 181 RILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPDEKVYNSMIMAF 240
           RILK MNEKG+TPDILTATVLVHMYSKVGNLDRAKEAF+TLRSHGFQPDEKVYNSMIM  
Sbjct: 410 RILKKMNEKGITPDILTATVLVHMYSKVGNLDRAKEAFETLRSHGFQPDEKVYNSMIMVS 469

Query: 241 VNAGQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSL 300
           VN+GQPKLGES+MREMEARDIKPSKDIYMA+LRSFSQRGDISGAGRI+ATMQF+G  PSL
Sbjct: 470 VNSGQPKLGESLMREMEARDIKPSKDIYMAILRSFSQRGDISGAGRISATMQFAGFPPSL 529

Query: 301 ESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKKNLLDKALNLLLQ 360
           ESC LLVETYG AGDPDQARNNFDYMIKIGHRPD RCTASMVAAY KKNLLDKALNLLLQ
Sbjct: 530 ESCTLLVETYGQAGDPDQARNNFDYMIKIGHRPDDRCTASMVAAYEKKNLLDKALNLLLQ 589

Query: 361 LEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGAHRE 392
           LEK+GFEPG  TYA L+DWLGKLQLVDEAEQ+LGKIGA  E
Sbjct: 590 LEKDGFEPGGSTYAVLIDWLGKLQLVDEAEQILGKIGAQGE 629

BLAST of Csor.00g052680 vs. ExPASy TrEMBL
Match: A0A6J1HDE2 (putative pentatricopeptide repeat-containing protein At2g02150 OS=Cucurbita moschata OX=3662 GN=LOC111462496 PE=3 SV=1)

HSP 1 Score: 682 bits (1761), Expect = 1.81e-240
Identity = 346/396 (87.37%), Postives = 369/396 (93.18%), Query Frame = 0

Query: 1   MEESEFYESLEQLKKEA------NASPSGAEEAASVEKSEPVSIPKRRGKIKYKIYGLHL 60
           MEESEFYESLEQLKKEA      N SPS  E A+ V KSE VS+PKRRGKIKYKIYGL L
Sbjct: 230 MEESEFYESLEQLKKEACTQEENNDSPSSVEAASEV-KSEAVSLPKRRGKIKYKIYGLDL 289

Query: 61  SDPKWSEVADKIHDAEEVIWPQEPKPISGKCKLITERILSLNENDDPSPLMAEWTELLQP 120
           SDPKWSEVADK+H+AEEV+WPQEPKPISGKCKL+TERILSLN+N+DPSPL+AEW +LLQP
Sbjct: 290 SDPKWSEVADKVHEAEEVLWPQEPKPISGKCKLVTERILSLNDNEDPSPLLAEWKDLLQP 349

Query: 121 TRIDWITLLDKLNDKNRFLYLKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERIL 180
           TR+DWI LLDKLN+ NRFLYLKVAELLL+EESF+T+IRDYSKLVDVHAKENRLEDAERIL
Sbjct: 350 TRVDWIALLDKLNESNRFLYLKVAELLLSEESFQTDIRDYSKLVDVHAKENRLEDAERIL 409

Query: 181 KMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVNA 240
           K MNEKG+TPDILTA+VLVHMYSKVGNLDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVNA
Sbjct: 410 KKMNEKGITPDILTASVLVHMYSKVGNLDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVNA 469

Query: 241 GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESC 300
           GQPKLGES+MREMEARDIKPS+DIYMALLRSFSQRGDISGAGRI+ATMQF+G SPSLESC
Sbjct: 470 GQPKLGESLMREMEARDIKPSQDIYMALLRSFSQRGDISGAGRISATMQFAGFSPSLESC 529

Query: 301 ILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKKNLLDKALNLLLQLEK 360
            LLVE YG AGDPDQARNNFDYMIKIGHRPD RCTASMVAAY KKNLLDKALNLLLQLEK
Sbjct: 530 TLLVEAYGQAGDPDQARNNFDYMIKIGHRPDDRCTASMVAAYEKKNLLDKALNLLLQLEK 589

Query: 361 NGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGAH 390
           +GFEPGV TYA LVDWLGKLQLVDEAEQ+LGKIGA 
Sbjct: 590 DGFEPGVATYAVLVDWLGKLQLVDEAEQILGKIGAQ 624

BLAST of Csor.00g052680 vs. TAIR 10
Match: AT1G19520.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 449.1 bits (1154), Expect = 3.9e-126
Identity = 223/398 (56.03%), Postives = 301/398 (75.63%), Query Frame = 0

Query: 1   MEESEFYESLEQLK------KEANASPSGAEEAASVE----KSEPVSIPKRRGKIKYKIY 60
           M+++EFYESLEQ +      +E+       EE   V     +S  +S+PKR+GK+KYKIY
Sbjct: 224 MDDAEFYESLEQQRDLDNSIRESETVDGEVEEEGFVPSDEVESRSISLPKRKGKLKYKIY 283

Query: 61  GLHLSDPKWSEVADKIHDAEEVIWPQEPKPISGKCKLITERILSLNENDDPSPLMAEWTE 120
           GL LSDPKW E+ADKIH+AEE    +EPKP++GKCKL+ E++ SL E DDPS L+AEW E
Sbjct: 284 GLELSDPKWVEMADKIHEAEEEADWREPKPVTGKCKLVMEKLESLQEGDDPSGLLAEWAE 343

Query: 121 LLQPTRIDWITLLDKLNDKNRFLYLKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDA 180
           LL+P R+DWI L+++L + N   YLKVAE +L+E+SF  +I DYSKL+ +HAKEN +ED 
Sbjct: 344 LLEPNRVDWIALINQLREGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAKENHIEDV 403

Query: 181 ERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPDEKVYNSMIMA 240
           ERILK M++ G+ PDILTAT LVHMYSK GN +RA EAF+ L+S+G +PDEK+Y +MI+ 
Sbjct: 404 ERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILG 463

Query: 241 FVNAGQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISP- 300
           +VNAG+PKLGE +M+EM+A+++K S+++YMALLR+++Q GD +GA  I+++MQ++   P 
Sbjct: 464 YVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPL 523

Query: 301 SLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKKNLLDKALNLL 360
           S E+  L VE YG AG  D+A++NFD M K+GH+PD +C A++V AY  +N LDKAL LL
Sbjct: 524 SFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLL 583

Query: 361 LQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKI 388
           LQLEK+G E GV TY  LVDW+  L L++EAEQLL KI
Sbjct: 584 LQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKI 621

BLAST of Csor.00g052680 vs. TAIR 10
Match: AT1G01970.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 229.2 bits (583), Expect = 6.4e-60
Identity = 119/327 (36.39%), Postives = 194/327 (59.33%), Query Frame = 0

Query: 59  WSEVADKIHDAEEVIWPQEPKPISGKCKLITERILSLN-ENDDPSPLMAEWTELLQPTRI 118
           W++V   + + ++    + P  +S +C+ +  +I+  + E      L+  W   + P R 
Sbjct: 72  WADVGLNLTEEQDEAITRIPIKMSKRCQALMRQIICFSPEKGSFCDLLGAWLRRMNPIRA 131

Query: 119 DWITLLDKLNDKNRFLYLKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMM 178
           DW+++L +L + +   Y+KVAE  L ++SFE N RDY+K++  + K N++EDAER L  M
Sbjct: 132 DWLSILKELKNLDSPFYIKVAEFSLLQDSFEANARDYTKIIHYYGKLNQVEDAERTLLSM 191

Query: 179 NEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVNAGQP 238
             +G   D +T T +V +YSK G    A+E F+ ++  G   D + Y SMIMA++ AG P
Sbjct: 192 KNRGFLIDQVTLTAMVQLYSKAGCHKLAEETFNEIKLLGEPLDYRSYGSMIMAYIRAGVP 251

Query: 239 KLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILL 298
           + GES++REM++++I   +++Y ALLR +S  GD  GA R+   +Q +GI+P ++ C LL
Sbjct: 252 EKGESLLREMDSQEICAGREVYKALLRDYSMGGDAEGAKRVFDAVQIAGITPDVKLCGLL 311

Query: 299 VETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKKNLLDKALNLLLQLEKNGF 358
           +  Y ++G    AR  F+ M K G +   +C A ++AAY K+  L++AL  L++LEK+  
Sbjct: 312 INAYSVSGQSQNARLAFENMRKAGIKATDKCVALVLAAYEKEEKLNEALGFLVELEKDSI 371

Query: 359 EPGVETYAALVDWLGKLQLVDEAEQLL 385
             G E  A L  W  KL +V+E E LL
Sbjct: 372 MLGKEASAVLAQWFKKLGVVEEVELLL 398

BLAST of Csor.00g052680 vs. TAIR 10
Match: AT1G19520.2 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 153.7 bits (387), Expect = 3.4e-37
Identity = 78/147 (53.06%), Postives = 104/147 (70.75%), Query Frame = 0

Query: 1   MEESEFYESLEQLK------KEANASPSGAEEAASVE----KSEPVSIPKRRGKIKYKIY 60
           M+++EFYESLEQ +      +E+       EE   V     +S  +S+PKR+GK+KYKIY
Sbjct: 224 MDDAEFYESLEQQRDLDNSIRESETVDGEVEEEGFVPSDEVESRSISLPKRKGKLKYKIY 283

Query: 61  GLHLSDPKWSEVADKIHDAEEVIWPQEPKPISGKCKLITERILSLNENDDPSPLMAEWTE 120
           GL LSDPKW E+ADKIH+AEE    +EPKP++GKCKL+ E++ SL E DDPS L+AEW E
Sbjct: 284 GLELSDPKWVEMADKIHEAEEEADWREPKPVTGKCKLVMEKLESLQEGDDPSGLLAEWAE 343

Query: 121 LLQPTRIDWITLLDKLNDKNRFLYLKV 138
           LL+P R+DWI L+++L + N   YLKV
Sbjct: 344 LLEPNRVDWIALINQLREGNTHAYLKV 370

BLAST of Csor.00g052680 vs. TAIR 10
Match: AT4G11690.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 116.7 bits (291), Expect = 4.6e-26
Identity = 66/246 (26.83%), Postives = 124/246 (50.41%), Query Frame = 0

Query: 142 LNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGN 201
           + E     NI  Y+ L+    +E +L +A +++  M   G+ P+++T   L+  +  VG 
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353

Query: 202 LDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVNAGQPKLGESMMREMEARDIKPSKDIYMA 261
           L +A      L+S G  P    YN ++  F   G       M++EME R IKPSK  Y  
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413

Query: 262 LLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIG 321
           L+ +F++  ++  A ++  +M+  G+ P + +  +L+  + + G  ++A   F  M++  
Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473

Query: 322 HRPDARCTASMVAAYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAE 381
             P+     +M+  Y K+    +AL LL ++E+    P V +Y  +++ L K +   EAE
Sbjct: 474 CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAE 533

Query: 382 QLLGKI 388
           +L+ K+
Sbjct: 534 RLVEKM 539

BLAST of Csor.00g052680 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 113.6 bits (283), Expect = 3.9e-25
Identity = 69/250 (27.60%), Postives = 124/250 (49.60%), Query Frame = 0

Query: 140 LLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKV 199
           LL+  + +  ++  YS +V+ + +   L+   +++++M  KGL P+      ++ +  ++
Sbjct: 270 LLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRI 329

Query: 200 GNLDRAKEAFDTLRSHGFQPDEKVYNSMIMAFVNAGQPKLGESMMREMEARDIKPSKDIY 259
             L  A+EAF  +   G  PD  VY ++I  F   G  +       EM +RDI P    Y
Sbjct: 330 CKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 389

Query: 260 MALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIK 319
            A++  F Q GD+  AG++   M   G+ P   +   L+  Y  AG    A    ++MI+
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449

Query: 320 IGHRPDARCTASMVAAYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDE 379
            G  P+     +++    K+  LD A  LL ++ K G +P + TY ++V+ L K   ++E
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 509

Query: 380 AEQLLGKIGA 390
           A +L+G+  A
Sbjct: 510 AVKLVGEFEA 519

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q940Z13.4e-6657.08Pentatricopeptide repeat-containing protein At1g19525 OS=Arabidopsis thaliana OX... [more]
Q9LPC49.0e-5936.39Pentatricopeptide repeat-containing protein At1g01970 OS=Arabidopsis thaliana OX... [more]
Q8LEZ44.8e-3653.06Protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial OS=Arabidopsis thaliana OX=370... [more]
Q9T0D66.5e-2526.83Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana OX... [more]
Q0WVK75.5e-2427.60Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
KAG6585585.19.60e-314100.00Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_023002246.14.60e-26497.18putative pentatricopeptide repeat-containing protein At2g02150 [Cucurbita maxima... [more]
XP_022951668.19.52e-26395.17pentatricopeptide repeat-containing protein At1g19525-like [Cucurbita moschata][more]
XP_022996674.12.81e-24287.88putative pentatricopeptide repeat-containing protein At2g02150 [Cucurbita maxima... [more]
KAG6598456.12.81e-24187.12Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
Match NameE-valueIdentityDescription
A0A6J1KKS42.23e-26497.18putative pentatricopeptide repeat-containing protein At2g02150 OS=Cucurbita maxi... [more]
A0A6J1GID44.61e-26395.17pentatricopeptide repeat-containing protein At1g19525-like OS=Cucurbita moschata... [more]
A0A6J1K9D91.36e-24287.88putative pentatricopeptide repeat-containing protein At2g02150 OS=Cucurbita maxi... [more]
A0A6J1CRK92.47e-24187.03pentatricopeptide repeat-containing protein At5g39710 OS=Momordica charantia OX=... [more]
A0A6J1HDE21.81e-24087.37putative pentatricopeptide repeat-containing protein At2g02150 OS=Cucurbita mosc... [more]
Match NameE-valueIdentityDescription
AT1G19520.13.9e-12656.03pentatricopeptide (PPR) repeat-containing protein [more]
AT1G01970.16.4e-6036.39Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G19520.23.4e-3753.06pentatricopeptide (PPR) repeat-containing protein [more]
AT4G11690.14.6e-2626.83Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT1G05670.13.9e-2527.60Pentatricopeptide repeat (PPR-like) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 160..180
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
NoneNo IPR availablePANTHERPTHR46862:SF2PROTEIN NUCLEAR FUSION DEFECTIVE 5, MITOCHONDRIALcoord: 1..392
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 154..186
e-value: 3.3E-5
score: 21.8
coord: 331..360
e-value: 0.0022
score: 16.1
coord: 190..221
e-value: 1.4E-4
score: 19.8
coord: 223..255
e-value: 1.8E-6
score: 25.7
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 172..233
e-value: 1.8E-8
score: 34.3
coord: 243..293
e-value: 8.7E-5
score: 22.5
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 331..357
e-value: 0.015
score: 15.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 220..254
score: 11.060009
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 150..184
score: 10.720209
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 325..359
score: 9.481582
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 185..219
score: 10.599635
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 292..403
e-value: 7.8E-16
score: 59.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 133..285
e-value: 1.0E-30
score: 109.2
IPR044657Pentatricopeptide repeat-containing protein NFD5-likePANTHERPTHR46862OS07G0661900 PROTEINcoord: 1..392

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g052680.m01Csor.00g052680.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding