Csor.00g052540 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTCCGTTAGGGGAATTTGAAGCGTCATCGAAAAGGAATGGTGGATTCGCGCCACGTGGGAACTGGCTAAGAGAGAGAAAGAAGAGAGAGATTGTGGATGACGATTGCTGTTTGATGGGACGGCGGCGATCGGCTCCGCCGATGAAGAAGGTGGACAATAGAAGGCGGAGATTCAACTGGAAAACTGTCCCAATGCGTAAAACTGGCGGGTAAACATTATCGATATTTGACTGTTAAATTAATTGATGTTTCCATTTTTTAAAAATTAATTTCTTTTTAAAGTCAATTTAAATAATAACAATTCGAATTAAAAAAATCAATTTTTACCTTTAAATTCGAAAATTTTATTAATTTTTAACCTACACTTTTAATTTTTTTTTATTAAATTGCACTTTAAATTTTAATAAATATAAAAAAACTACCTTCACTATTGTCTAAAAATTATTTTAGAATATATATATATATATAATAGATTATTACTACATCAATACAATTTTATACAAAATAAAATAAAATAAAATAAAATCAGTTAGGATAATTTTGAAAAATTTGTTGTTTTTTTTATTTATTTATTAATATTTGATTTTAAAAAAATTGAACTAATGATGAAAAAAATATTTATTTAATTATAAAGTTAAAATGGATGAAATTAACATAATTTAATAATAATTAACACGTCTAAAAAATTATAGGCTCGAGTTTCACGGTTCCAAATGTTGTTGAACTCAAAATAATAATAATAATTAAGTGAATAAATAACTACTACCTATACGTGTAAATATAAATGATATTTAAAAATAAATTATTTTTATATCAAATTCCATAAACTTTACGGCAAACTAAAAAAATTATAATATCTTATCTATTATTATCGGTCAATTTCTTGTATAAAACGACACTTTAAAAAGAATAAAAACTCTCAATTTTTTAAAGGAATATTTATAAATATGCTCGAGAATAATATATTTCTATATTTAATTTTACTTTTGATAACAATAATTTTATTCTAATGGGTTATTCTTTTTTAATATTGAAATTTTATTAAATAAAAAAAGGCTCCGTAGTAATAAAATAAATTTAAAATTATTTGATTGTTGATTATTATATTTCAAGATTAAAAATGATAAAAAAAAAACATATTATTTAATTATTCATTTTAATTAGTTTAGAATATCTTAATAATTAAACACTTATCTAATTTTATCGTCTAATTTGTCATTTATTTATTATTTAAACGATTATTTTTATGAAATAATTATAAGTAAAAAAAAAAAAATCTGGGCCAAGCATAAAAGTATCCCTGTTCTTCAGCTACGACAACGATCGGACTCCGCATTATCTCGGTTCCAACCGCCGTCTCACGATCAGAACAATGATCCATTCCAAGAAAGGCAATTGCAGCGCCGTCAGTTTCCGATCACAACATCTCGTAGAGGCCTCACGATGATCTCATTTCTCGCTGCGATGCCGTCTCTGTTTCTACCTGCTCCTGCCGCTGCTTTGAATCTCGGCATTTGTAAGCACGCTACGCAACATTGTGTCGTTGATTGGTTTACTTGTCCTTTTGTTCTTTATTTTCTTGTTGAAACCCTAGTTTATCGGTTTGTTTGCAGCAGGAACGAAGGATTGCTTGAAGGAGCAATAG ATGGTTCCGTTAGGGGAATTTGAAGCGTCATCGAAAAGGAATGGTGGATTCGCGCCACGTGGGAACTGGCTAAGAGAGAGAAAGAAGAGAGAGATTGTGGATGACGATTGCTGTTTGATGGGACGGCGGCGATCGGCTCCGCCGATGAAGAAGCTACGACAACGATCGGACTCCGCATTATCTCGGTTCCAACCGCCGTCTCACGATCAGAACAATGATCCATTCCAAGAAAGGCAATTGCAGCGCCGTCAGTTTCCGATCACAACATCTCGTAGAGGCCTCACGATGATCTCATTTCTCGCTGCGATGCCGTCTCTGTTTCTACCTGCTCCTGCCGCTGCTTTGAATCTCGGCATTTCAGGAACGAAGGATTGCTTGAAGGAGCAATAG ATGGTTCCGTTAGGGGAATTTGAAGCGTCATCGAAAAGGAATGGTGGATTCGCGCCACGTGGGAACTGGCTAAGAGAGAGAAAGAAGAGAGAGATTGTGGATGACGATTGCTGTTTGATGGGACGGCGGCGATCGGCTCCGCCGATGAAGAAGCTACGACAACGATCGGACTCCGCATTATCTCGGTTCCAACCGCCGTCTCACGATCAGAACAATGATCCATTCCAAGAAAGGCAATTGCAGCGCCGTCAGTTTCCGATCACAACATCTCGTAGAGGCCTCACGATGATCTCATTTCTCGCTGCGATGCCGTCTCTGTTTCTACCTGCTCCTGCCGCTGCTTTGAATCTCGGCATTTCAGGAACGAAGGATTGCTTGAAGGAGCAATAG MVPLGEFEASSKRNGGFAPRGNWLRERKKREIVDDDCCLMGRRRSAPPMKKLRQRSDSALSRFQPPSHDQNNDPFQERQLQRRQFPITTSRRGLTMISFLAAMPSLFLPAPAAALNLGISGTKDCLKEQ Homology
BLAST of Csor.00g052540 vs. NCBI nr
Match: KAG6585599.1 (hypothetical protein SDJN03_18332, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 261 bits (667), Expect = 6.79e-88 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
BLAST of Csor.00g052540 vs. NCBI nr
Match: KAG7020512.1 (hypothetical protein SDJN02_17197, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 239 bits (610), Expect = 7.45e-78 Identity = 119/124 (95.97%), Postives = 120/124 (96.77%), Query Frame = 0
BLAST of Csor.00g052540 vs. NCBI nr
Match: XP_038884858.1 (uncharacterized protein LOC120075490 isoform X3 [Benincasa hispida]) HSP 1 Score: 95.9 bits (237), Expect = 8.88e-22 Identity = 49/72 (68.06%), Postives = 57/72 (79.17%), Query Frame = 0
BLAST of Csor.00g052540 vs. NCBI nr
Match: XP_038884856.1 (uncharacterized protein LOC120075490 isoform X2 [Benincasa hispida]) HSP 1 Score: 95.9 bits (237), Expect = 2.17e-21 Identity = 49/72 (68.06%), Postives = 57/72 (79.17%), Query Frame = 0
BLAST of Csor.00g052540 vs. NCBI nr
Match: XP_038884855.1 (uncharacterized protein LOC120075490 isoform X1 [Benincasa hispida]) HSP 1 Score: 95.9 bits (237), Expect = 2.36e-21 Identity = 49/72 (68.06%), Postives = 57/72 (79.17%), Query Frame = 0
BLAST of Csor.00g052540 vs. ExPASy TrEMBL
Match: A0A5A7VAP0 (Chloroplast thylakoid membrane OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005740 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 1.17e-20 Identity = 46/65 (70.77%), Postives = 53/65 (81.54%), Query Frame = 0
BLAST of Csor.00g052540 vs. ExPASy TrEMBL
Match: A0A1S3BAY8 (uncharacterized protein LOC103487971 OS=Cucumis melo OX=3656 GN=LOC103487971 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 1.17e-20 Identity = 46/65 (70.77%), Postives = 53/65 (81.54%), Query Frame = 0
BLAST of Csor.00g052540 vs. ExPASy TrEMBL
Match: A0A0A0LPA8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361670 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 2.32e-20 Identity = 47/72 (65.28%), Postives = 55/72 (76.39%), Query Frame = 0
BLAST of Csor.00g052540 vs. ExPASy TrEMBL
Match: A0A6J1CT65 (uncharacterized protein LOC111013988 OS=Momordica charantia OX=3673 GN=LOC111013988 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 2.48e-15 Identity = 45/72 (62.50%), Postives = 54/72 (75.00%), Query Frame = 0
BLAST of Csor.00g052540 vs. ExPASy TrEMBL
Match: A0A6J1HBA0 (uncharacterized protein LOC111462505 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462505 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 5.65e-15 Identity = 42/72 (58.33%), Postives = 52/72 (72.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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