Csor.00g052490 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g052490
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr12: 2623863 .. 2624927 (+)
RNA-Seq ExpressionCsor.00g052490
SyntenyCsor.00g052490
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTGCCCCAAATCCATTTCTTGCTCATTGCTAATGGATAAGATCGGTGTCTTCCTTTCTACGCCCATCTACTTTTCTTCAGATTTACTTCTCTGGTAATTTTCCATCATTTTCTTCGGATAATCTCGTGGTTTCTGTTCTCATTTCCGACGCAACTTCTGGATACTGATCGGATTTCAATTCCTCGTTTCAAATTGGATTGGTAATCGTTTCTCGGCTAGTGATTTTCCCATTTGTTTGTGTGGAGGGTACTTGCTGATCGCGCTTGGTTTGGAATCAAACGCTTTGATTGTGTTGCTTGAAAGCGATTCGAGAACACTCCTCGAACAAGACTTTGTAGTGGAGAGGGATACCGATAAATAGAGATTTTGAATGCTGGATTTAGCGTGAGTCTATTTTTCTATGTAATTCTGAAGCAATACAGATTATCACGGGTTTCTTGGCCGGCGGTTGGCTCGCGTGATGTGGATTTGTTCGATTTGTTCGAGGCTGGCAGATTCTTGGAGGAAACATTTAGGTTAGAAATTTTGATCTTAGACGTTTGTTCAATTTAATTTCCATTGAAACTCTTTGGATTTGTGACTTTTCAAGGTGTAAATTCATGGTTGGGTGTATCTTTTTTCTGCTAATGGTTTCTGAATGTCCGATTCTAAGGATTTTCTCTTTAGTTTCTTAGTTTATCTCTCTTCAGTTAGGTGTATTTATGTCTTGAATTAACATCCCCAGGTTAGAAGTATGCTACTCATACGGTTCGGTTGGATACTTGGATGTTATTCAATTGGTGTGGGGTTGGTTTTGTCCATTGATTTGAGCTTGCCTGAATTGGAACTTCTTTCAGTTTTGATCTTGACTTCGTTTTCCCCCTTATTTTTAGGATTTCTATTCCTGGAATTTACTTTTCTATTTATGAACTTGATTTCCTGACATTACTGTGCTCTGTTTTGGATGAATGCGTATGGTTTTGATCGTTTGAGATTTTGAAACTTTACTTGAAAGAAAAGATCAATCTGTTCCTTATTTTGATGATCTTAGCAATATATATGTTTCAGGATTGAGTTGTGA

mRNA sequence

ATGGCTTGCCCCAAATCCATTTCTTGCTCATTGCTAATGGATAAGATCGGTGTCTTCCTTTCTACGCCCATCTACTTTTCTTCAGATTTACTTCTCTGGGTACTTGCTGATCGCGCTTGCGTGAGTCTATTTTTCTATGTAATTCTGAAGCAATACAGATTATCACGGGTTTCTTGGCCGGCGGTTGGCTCGCGTGATGTGGATTTGTTCGATTTGTTCGAGGCTGGCAGATTCTTGGAGGAAACATTTAGGATTGAGTTGTGA

Coding sequence (CDS)

ATGGCTTGCCCCAAATCCATTTCTTGCTCATTGCTAATGGATAAGATCGGTGTCTTCCTTTCTACGCCCATCTACTTTTCTTCAGATTTACTTCTCTGGGTACTTGCTGATCGCGCTTGCGTGAGTCTATTTTTCTATGTAATTCTGAAGCAATACAGATTATCACGGGTTTCTTGGCCGGCGGTTGGCTCGCGTGATGTGGATTTGTTCGATTTGTTCGAGGCTGGCAGATTCTTGGAGGAAACATTTAGGATTGAGTTGTGA

Protein sequence

MACPKSISCSLLMDKIGVFLSTPIYFSSDLLLWVLADRACVSLFFYVILKQYRLSRVSWPAVGSRDVDLFDLFEAGRFLEETFRIEL
Homology
[Close]
BLAST of Csor.00g052490 vs. NCBI nr
Match: KAG6585604.1 (hypothetical protein SDJN03_18337, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 175 bits (444), Expect = 3.26e-55
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 1  MACPKSISCSLLMDKIGVFLSTPIYFSSDLLLWVLADRACVSLFFYVILKQYRLSRVSWP 60
          MACPKSISCSLLMDKIGVFLSTPIYFSSDLLLWVLADRACVSLFFYVILKQYRLSRVSWP
Sbjct: 1  MACPKSISCSLLMDKIGVFLSTPIYFSSDLLLWVLADRACVSLFFYVILKQYRLSRVSWP 60

Query: 61 AVGSRDVDLFDLFEAGRFLEETFRIEL 87
          AVGSRDVDLFDLFEAGRFLEETFRIEL
Sbjct: 61 AVGSRDVDLFDLFEAGRFLEETFRIEL 87

The following BLAST results are available for this feature:
BLAST of Csor.00g052490 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g052490 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6585604.13.26e-55100.00hypothetical protein SDJN03_18337, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g052490 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g052490 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g052490.m01Csor.00g052490.m01mRNA