Csor.00g051880 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g051880
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr12: 3007874 .. 3008495 (+)
RNA-Seq ExpressionCsor.00g051880
SyntenyCsor.00g051880
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGCTGTCCATGCAATGAGGAAGATGTGGAATCTCCACCGCCTCCCATTTGTGTTCTTTCTATTCTTAGCTTCAATTTTTCACCTCATTTTCGTTAGTTTTGCATTTTTTTATTCTCAATTTCCCCTTCCCATTCACCTAGGCTCATTTCAATTCCGTTTCTCCTCTCCGGTACGCTTCTCTTCCAATTCCATTTTGCGTTCGATTTATTCTCGTTGCATTATGTTCGTTGTAGATTAGAATCATTTGTTCGTTAATTTGAGTACGTTTCTGAATTCGTGATGTGTTTTTGTTTCTGTTTTCTATAAATGAACGATCGATTTGGTTTCGTTGTTTTGATCGAACCTAATCGGGAACAACACGTAACCGAGTATTTTCGCCTTAGAGAAGTTTGAATCTCGCTGTTGAAAATGATTTCCAGTTTTCACCGAAGATGCGCTTATCTCGGAATTTCAATCTTTGTGGATTTTTGAAGAACCTGTTCATAATTATCGTAGGGTTCTGATTTGTTAATTTCTGGTTTTGTTTGGAATTGATGTGTTTCTGGTTTTCCATTTCTACTGAATCGGGGGGAATGTAGCTTGACGGTTCGACGATGGCGATTCAATTCAACATGTAA

mRNA sequence

ATGGATGCTGTCCATGCAATGAGGAAGATGTGGAATCTCCACCGCCTCCCATTTGTGTTCTTTCTATTCTTAGCTTCAATTTTTCACCTCATTTTCGTTAGTTTTGCATTTTTTTATTCTCAATTTCCCCTTCCCATTCACCTAGGCTCATTTCAATTCCGTTTCTCCTCTCCGCTTGACGGTTCGACGATGGCGATTCAATTCAACATGTAA

Coding sequence (CDS)

ATGGATGCTGTCCATGCAATGAGGAAGATGTGGAATCTCCACCGCCTCCCATTTGTGTTCTTTCTATTCTTAGCTTCAATTTTTCACCTCATTTTCGTTAGTTTTGCATTTTTTTATTCTCAATTTCCCCTTCCCATTCACCTAGGCTCATTTCAATTCCGTTTCTCCTCTCCGCTTGACGGTTCGACGATGGCGATTCAATTCAACATGTAA

Protein sequence

MDAVHAMRKMWNLHRLPFVFFLFLASIFHLIFVSFAFFYSQFPLPIHLGSFQFRFSSPLDGSTMAIQFNM
Homology
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BLAST of Csor.00g051880 vs. NCBI nr
Match: KAG6585664.1 (hypothetical protein SDJN03_18397, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 139 bits (350), Expect = 2.16e-41
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0 

Query: 1  MDAVHAMRKMWNLHRLPFVFFLFLASIFHLIFVSFAFFYSQFPLPIHLGSFQFRFSSPLD 60
          MDAVHAMRKMWNLHRLPFVFFLFLASIFHLIFVSFAFFYSQFPLPIHLGSFQFRFSSPLD
Sbjct: 1  MDAVHAMRKMWNLHRLPFVFFLFLASIFHLIFVSFAFFYSQFPLPIHLGSFQFRFSSPLD 60

Query: 61 GSTMAIQFNM 70
          GSTMAIQFNM
Sbjct: 61 GSTMAIQFNM 70

The following BLAST results are available for this feature:
BLAST of Csor.00g051880 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g051880 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6585664.12.16e-41100.00hypothetical protein SDJN03_18397, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g051880 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g051880 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g051880.m01Csor.00g051880.m01mRNA