Csor.00g051660 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g051660
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr12: 3151833 .. 3152069 (+)
RNA-Seq ExpressionCsor.00g051660
SyntenyCsor.00g051660
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCGTTGTTGTGTTGGAGTTTTGGCTGTGATGATACTGTTGGCAATGGTGTTTGTTCATGTGGATTGCAGGGTGCTCACATCGATGGGAGATACTCGGGCTGTGATGGGAACTGGCCGGGAGCATGTCGGGAAAGGTAACACGACTGAGTTCGTTAGGTTTGGTGGTGGTCGGAAGGGAAGATGGGCATTCAAGCATACTTCTGGACCGAGCAAAAGAGGACCAGGACATTAG

mRNA sequence

ATGAAGCGTTGTTGTGTTGGAGTTTTGGCTGTGATGATACTGTTGGCAATGGTGTTTGTTCATGTGGATTGCAGGGTGCTCACATCGATGGGAGATACTCGGGCTGTGATGGGAACTGGCCGGGAGCATGTCGGGAAAGGTAACACGACTGAGTTCGTTAGGTTTGGTGGTGGTCGGAAGGGAAGATGGGCATTCAAGCATACTTCTGGACCGAGCAAAAGAGGACCAGGACATTAG

Coding sequence (CDS)

ATGAAGCGTTGTTGTGTTGGAGTTTTGGCTGTGATGATACTGTTGGCAATGGTGTTTGTTCATGTGGATTGCAGGGTGCTCACATCGATGGGAGATACTCGGGCTGTGATGGGAACTGGCCGGGAGCATGTCGGGAAAGGTAACACGACTGAGTTCGTTAGGTTTGGTGGTGGTCGGAAGGGAAGATGGGCATTCAAGCATACTTCTGGACCGAGCAAAAGAGGACCAGGACATTAG

Protein sequence

MKRCCVGVLAVMILLAMVFVHVDCRVLTSMGDTRAVMGTGREHVGKGNTTEFVRFGGGRKGRWAFKHTSGPSKRGPGH
Homology
BLAST of Csor.00g051660 vs. NCBI nr
Match: KAG6585686.1 (hypothetical protein SDJN03_18419, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 157 bits (396), Expect = 3.62e-48
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0

Query: 1  MKRCCVGVLAVMILLAMVFVHVDCRVLTSMGDTRAVMGTGREHVGKGNTTEFVRFGGGRK 60
          MKRCCVGVLAVMILLAMVFVHVDCRVLTSMGDTRAVMGTGREHVGKGNTTEFVRFGGGRK
Sbjct: 1  MKRCCVGVLAVMILLAMVFVHVDCRVLTSMGDTRAVMGTGREHVGKGNTTEFVRFGGGRK 60

Query: 61 GRWAFKHTSGPSKRGPGH 78
          GRWAFKHTSGPSKRGPGH
Sbjct: 61 GRWAFKHTSGPSKRGPGH 78

BLAST of Csor.00g051660 vs. NCBI nr
Match: KAA0060930.1 (hypothetical protein E6C27_scaffold501G00630 [Cucumis melo var. makuwa])

HSP 1 Score: 89.0 bits (219), Expect = 1.45e-20
Identity = 52/79 (65.82%), Postives = 56/79 (70.89%), Query Frame = 0

Query: 1   MKRCCVGVLAVMILLAMVFVHVDCRVLTSMGDTRAVMGTGR-EHVGKGNTTEFVRFGGGR 60
           MK    GV AVMILLAMVFVHVDCR L S  +T   +GTGR E V KG+T+  V F G R
Sbjct: 51  MKPSFFGVFAVMILLAMVFVHVDCRHLRSRVETLPTVGTGRVEKVTKGDTSGLVSFNGHR 110

Query: 61  KGRWAFKHTSGPSKRGPGH 78
           KG WAFKH SGPS RGPGH
Sbjct: 111 KGSWAFKHASGPSMRGPGH 129

BLAST of Csor.00g051660 vs. NCBI nr
Match: KAE8652069.1 (hypothetical protein Csa_018550 [Cucumis sativus])

HSP 1 Score: 86.3 bits (212), Expect = 1.35e-19
Identity = 51/79 (64.56%), Postives = 54/79 (68.35%), Query Frame = 0

Query: 1   MKRCCVGVLAVMILLAMVFVHVDCRVLTSMGDTRAVMGTGR-EHVGKGNTTEFVRFGGGR 60
           MK    GV AVM LLAMVFVHVDCR L S  +T   +GTGR E V KG+T   V F G R
Sbjct: 43  MKARFFGVFAVMTLLAMVFVHVDCRHLRSRVETLPTVGTGRVEKVTKGDTNGLVSFSGHR 102

Query: 61  KGRWAFKHTSGPSKRGPGH 78
           KG WAFKH SGPS RGPGH
Sbjct: 103 KGSWAFKHASGPSMRGPGH 121

BLAST of Csor.00g051660 vs. ExPASy TrEMBL
Match: A0A5A7V0S4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00630 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 7.01e-21
Identity = 52/79 (65.82%), Postives = 56/79 (70.89%), Query Frame = 0

Query: 1   MKRCCVGVLAVMILLAMVFVHVDCRVLTSMGDTRAVMGTGR-EHVGKGNTTEFVRFGGGR 60
           MK    GV AVMILLAMVFVHVDCR L S  +T   +GTGR E V KG+T+  V F G R
Sbjct: 51  MKPSFFGVFAVMILLAMVFVHVDCRHLRSRVETLPTVGTGRVEKVTKGDTSGLVSFNGHR 110

Query: 61  KGRWAFKHTSGPSKRGPGH 78
           KG WAFKH SGPS RGPGH
Sbjct: 111 KGSWAFKHASGPSMRGPGH 129

BLAST of Csor.00g051660 vs. ExPASy TrEMBL
Match: A0A0A0LKP9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G355010 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.09e-20
Identity = 51/79 (64.56%), Postives = 54/79 (68.35%), Query Frame = 0

Query: 1  MKRCCVGVLAVMILLAMVFVHVDCRVLTSMGDTRAVMGTGR-EHVGKGNTTEFVRFGGGR 60
          MK    GV AVM LLAMVFVHVDCR L S  +T   +GTGR E V KG+T   V F G R
Sbjct: 1  MKARFFGVFAVMTLLAMVFVHVDCRHLRSRVETLPTVGTGRVEKVTKGDTNGLVSFSGHR 60

Query: 61 KGRWAFKHTSGPSKRGPGH 78
          KG WAFKH SGPS RGPGH
Sbjct: 61 KGSWAFKHASGPSMRGPGH 79

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6585686.13.62e-48100.00hypothetical protein SDJN03_18419, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0060930.11.45e-2065.82hypothetical protein E6C27_scaffold501G00630 [Cucumis melo var. makuwa][more]
KAE8652069.11.35e-1964.56hypothetical protein Csa_018550 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A5A7V0S47.01e-2165.82Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0LKP92.09e-2064.56Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G355010 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g051660.m01Csor.00g051660.m01mRNA