Csor.00g051050 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g051050
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr12: 3555782 .. 3556438 (+)
RNA-Seq ExpressionCsor.00g051050
SyntenyCsor.00g051050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTTGCTCCTCTTTGGTGTGGTATAGGTTTGAGGATGGTGGAGGTCGCAAAGGAGCAACTGATTGTTCTTGTTTCGCTTATATTTTTTTTAAGAATCATTGGCTTATGGTTACTCTTTTCCTTCGTGGTTTTATTTGCAGGCATGTACAGAAAAGGACCTGCGAGATTATTCAGTCATTTGCTGATTTCTTTACCACCAAGAGTAACTATCCCATTGATTAATTGAGAATCAGTTACTTGTTTTCATGTAAATTGTAGGAGTCTGCTGAAAAATTCAACCATTTTCTTACCTCAAATTCGTTTAGGTTCTTGCCAATTCTTGTGGAAGATAGTTCCTGTTGTCATAATTTAGAAAGTATGGGTTCTGATAGAATCTATTTTTGATCTTGAAAAGCCTTTGATCCATGATTGAACTTAATAATATTAACCAACTTCAGTTATCATAGATGTTCTTGAATTCTTTGACAATCTTTTTAAGCTATCATTTATGAATTCAATTGCCTTATTGATACCCTTTTCTGACAGAAGAAGGAAGAATCACATGTTTATATTCTCAAGTGGAAGAAAGAAAATCTACATAGAGAACAAAGATGTACTTTCAAGTCATTACAGGCAGAAAGAACAAAGATGAGTATCATTTACATGAAATGCTGA

mRNA sequence

ATGATTTGCTCCTCTTTGGTGTGGTATAGGTTTGAGGATGGTGGAGGCATGTACAGAAAAGGACCTGCGAGATTATTCAGTCATTTGCTGATTTCTTTACCACCAAGAAAGAAGGAAGAATCACATGTTTATATTCTCAAGTGGAAGAAAGAAAATCTACATAGAGAACAAAGATGTACTTTCAAGTCATTACAGGCAGAAAGAACAAAGATGAGTATCATTTACATGAAATGCTGA

Coding sequence (CDS)

ATGATTTGCTCCTCTTTGGTGTGGTATAGGTTTGAGGATGGTGGAGGCATGTACAGAAAAGGACCTGCGAGATTATTCAGTCATTTGCTGATTTCTTTACCACCAAGAAAGAAGGAAGAATCACATGTTTATATTCTCAAGTGGAAGAAAGAAAATCTACATAGAGAACAAAGATGTACTTTCAAGTCATTACAGGCAGAAAGAACAAAGATGAGTATCATTTACATGAAATGCTGA

Protein sequence

MICSSLVWYRFEDGGGMYRKGPARLFSHLLISLPPRKKEESHVYILKWKKENLHREQRCTFKSLQAERTKMSIIYMKC
Homology
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BLAST of Csor.00g051050 vs. NCBI nr
Match: KAG6585747.1 (hypothetical protein SDJN03_18480, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 166 bits (419), Expect = 1.12e-51
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 

Query: 1  MICSSLVWYRFEDGGGMYRKGPARLFSHLLISLPPRKKEESHVYILKWKKENLHREQRCT 60
          MICSSLVWYRFEDGGGMYRKGPARLFSHLLISLPPRKKEESHVYILKWKKENLHREQRCT
Sbjct: 1  MICSSLVWYRFEDGGGMYRKGPARLFSHLLISLPPRKKEESHVYILKWKKENLHREQRCT 60

Query: 61 FKSLQAERTKMSIIYMKC 78
          FKSLQAERTKMSIIYMKC
Sbjct: 61 FKSLQAERTKMSIIYMKC 78

The following BLAST results are available for this feature:
BLAST of Csor.00g051050 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g051050 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6585747.11.12e-51100.00hypothetical protein SDJN03_18480, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g051050 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g051050 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g051050.m01Csor.00g051050.m01mRNA