Csor.00g050990 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g050990
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionleucine-rich repeat extensin-like protein 3
LocationCsor_Chr12: 3572281 .. 3572814 (-)
RNA-Seq ExpressionCsor.00g050990
SyntenyCsor.00g050990
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACATTCCACTACAACCACCCTCTTCTTCATTCTTTTGATCGTCCACCTCGCCGGAGCCGCCATGCCCTCCGACAACCACCGTCTCGTCGAGGTAGTGCCTCCGGTAAGCCTCCTCTGTATCAGCGAATGCTCAACTTGCCCTGTCATATGCGCACCCCCACCACCGCCCACGGTGACACTCAAGTCTCCTCCACCGGTGCCTCACTCCCCTCCGATGGCTTCCTTCCCACTCAACCCACCCCCATCCCCACCTCGACCAACCCCATCACCACCGCCGCCTCCAGTGCCGGTGGCAGCTTCATCTCATTCCCCACCGCCTCCCGCTTTCAAATACTATTTCAGCTTGCCACCACCGCCGCCAGTGCTGATCCCGGAGCCTCTGCCGCCGACGACGGCGGCGCCTCATGGAAATACCAATGCTTATAATTACTACTTCTACGCTTCGAATTCATGTTCTCTGAATTCTCCGGCGTTTTTGTGGGCTCTGTTTCTCTTCCATTTGGTGCGTGTCTTGGTGGTGGTGAAGTGA

mRNA sequence

ATGGAACATTCCACTACAACCACCCTCTTCTTCATTCTTTTGATCGTCCACCTCGCCGGAGCCGCCATGCCCTCCGACAACCACCGTCTCGTCGAGGTAGTGCCTCCGGTAAGCCTCCTCTGTATCAGCGAATGCTCAACTTGCCCTGTCATATGCGCACCCCCACCACCGCCCACGGTGACACTCAAGTCTCCTCCACCGGTGCCTCACTCCCCTCCGATGGCTTCCTTCCCACTCAACCCACCCCCATCCCCACCTCGACCAACCCCATCACCACCGCCGCCTCCAGTGCCGGTGGCAGCTTCATCTCATTCCCCACCGCCTCCCGCTTTCAAATACTATTTCAGCTTGCCACCACCGCCGCCAGTGCTGATCCCGGAGCCTCTGCCGCCGACGACGGCGGCGCCTCATGGAAATACCAATGCTTATAATTACTACTTCTACGCTTCGAATTCATGTTCTCTGAATTCTCCGGCGTTTTTGTGGGCTCTGTTTCTCTTCCATTTGGTGCGTGTCTTGGTGGTGGTGAAGTGA

Coding sequence (CDS)

ATGGAACATTCCACTACAACCACCCTCTTCTTCATTCTTTTGATCGTCCACCTCGCCGGAGCCGCCATGCCCTCCGACAACCACCGTCTCGTCGAGGTAGTGCCTCCGGTAAGCCTCCTCTGTATCAGCGAATGCTCAACTTGCCCTGTCATATGCGCACCCCCACCACCGCCCACGGTGACACTCAAGTCTCCTCCACCGGTGCCTCACTCCCCTCCGATGGCTTCCTTCCCACTCAACCCACCCCCATCCCCACCTCGACCAACCCCATCACCACCGCCGCCTCCAGTGCCGGTGGCAGCTTCATCTCATTCCCCACCGCCTCCCGCTTTCAAATACTATTTCAGCTTGCCACCACCGCCGCCAGTGCTGATCCCGGAGCCTCTGCCGCCGACGACGGCGGCGCCTCATGGAAATACCAATGCTTATAATTACTACTTCTACGCTTCGAATTCATGTTCTCTGAATTCTCCGGCGTTTTTGTGGGCTCTGTTTCTCTTCCATTTGGTGCGTGTCTTGGTGGTGGTGAAGTGA

Protein sequence

MEHSTTTTLFFILLIVHLAGAAMPSDNHRLVEVVPPVSLLCISECSTCPVICAPPPPPTVTLKSPPPVPHSPPMASFPLNPPPSPPRPTPSPPPPPVPVAASSHSPPPPAFKYYFSLPPPPPVLIPEPLPPTTAAPHGNTNAYNYYFYASNSCSLNSPAFLWALFLFHLVRVLVVVK
Homology
BLAST of Csor.00g050990 vs. NCBI nr
Match: KAG6585753.1 (hypothetical protein SDJN03_18486, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 334 bits (857), Expect = 2.66e-115
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0

Query: 1   MEHSTTTTLFFILLIVHLAGAAMPSDNHRLVEVVPPVSLLCISECSTCPVICAPPPPPTV 60
           MEHSTTTTLFFILLIVHLAGAAMPSDNHRLVEVVPPVSLLCISECSTCPVICAPPPPPTV
Sbjct: 1   MEHSTTTTLFFILLIVHLAGAAMPSDNHRLVEVVPPVSLLCISECSTCPVICAPPPPPTV 60

Query: 61  TLKSPPPVPHSPPMASFPLNPPPSPPRPTPSPPPPPVPVAASSHSPPPPAFKYYFSLPPP 120
           TLKSPPPVPHSPPMASFPLNPPPSPPRPTPSPPPPPVPVAASSHSPPPPAFKYYFSLPPP
Sbjct: 61  TLKSPPPVPHSPPMASFPLNPPPSPPRPTPSPPPPPVPVAASSHSPPPPAFKYYFSLPPP 120

Query: 121 PPVLIPEPLPPTTAAPHGNTNAYNYYFYASNSCSLNSPAFLWALFLFHLVRVLVVVK 177
           PPVLIPEPLPPTTAAPHGNTNAYNYYFYASNSCSLNSPAFLWALFLFHLVRVLVVVK
Sbjct: 121 PPVLIPEPLPPTTAAPHGNTNAYNYYFYASNSCSLNSPAFLWALFLFHLVRVLVVVK 177

BLAST of Csor.00g050990 vs. NCBI nr
Match: KAG7020664.1 (hypothetical protein SDJN02_17350, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 333 bits (854), Expect = 7.63e-115
Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 0

Query: 1   MEHSTTTTLFFILLIVHLAGAAMPSDNHRLVEVVPPVSLLCISECSTCPVICAPPPPPTV 60
           MEHSTTTTLFFILLIVHLAGAAMPSDNHRLVEVVPPVSLLCISECSTCPVICAPPPPPTV
Sbjct: 1   MEHSTTTTLFFILLIVHLAGAAMPSDNHRLVEVVPPVSLLCISECSTCPVICAPPPPPTV 60

Query: 61  TLKSPPPVPHSPPMASFPLNPPPSPPRPTPSPPPPPVPVAASSHSPPPPAFKYYFSLPPP 120
           TLKSPPPVPHSPPMASFPLNPPPSPPRPTPSPPPPPVPVAASSHSPPPPA+KYYFSLPPP
Sbjct: 61  TLKSPPPVPHSPPMASFPLNPPPSPPRPTPSPPPPPVPVAASSHSPPPPAYKYYFSLPPP 120

Query: 121 PPVLIPEPLPPTTAAPHGNTNAYNYYFYASNSCSLNSPAFLWALFLFHLVRVLVVVK 177
           PPVLIPEPLPPTTAAPHGNTNAYNYYFYASNSCSLNSPAFLWALFLFHLVRVLVVVK
Sbjct: 121 PPVLIPEPLPPTTAAPHGNTNAYNYYFYASNSCSLNSPAFLWALFLFHLVRVLVVVK 177

BLAST of Csor.00g050990 vs. NCBI nr
Match: XP_022951103.1 (extensin-3-like [Cucurbita moschata])

HSP 1 Score: 325 bits (833), Expect = 1.21e-111
Identity = 173/177 (97.74%), Postives = 174/177 (98.31%), Query Frame = 0

Query: 1   MEHSTTTTLFFILLIVHLAGAAMPSDNHRLVEVVPPVSLLCISECSTCPVICAPPPPPTV 60
           MEHSTTTTLFFILLIVHLAGAAM SDNHRLVEVVPPVSLLCISECSTCPVICAPPPPPTV
Sbjct: 1   MEHSTTTTLFFILLIVHLAGAAMASDNHRLVEVVPPVSLLCISECSTCPVICAPPPPPTV 60

Query: 61  TLKSPPPVPHSPPMASFPLNPPPSPPRPTPSPPPPPVPVAASSHSPPPPAFKYYFSLPPP 120
           TLKSPPPVPHSPPMASFPLNPPPSPPRP+PSPPPPPVPVAASSHSPPPPAFKYYFSLPPP
Sbjct: 61  TLKSPPPVPHSPPMASFPLNPPPSPPRPSPSPPPPPVPVAASSHSPPPPAFKYYFSLPPP 120

Query: 121 PPVLIPEPLPPTTAAPHGNTNAYNYYFYASNSCSLNSPAFLWALFLFHLVRVLVVVK 177
           PPVLIPEPLPPTTAAPHGNTNAYNYYFYASNSCSLNSP FLWALFLFHLV VLVVVK
Sbjct: 121 PPVLIPEPLPPTTAAPHGNTNAYNYYFYASNSCSLNSPVFLWALFLFHLVCVLVVVK 177

BLAST of Csor.00g050990 vs. NCBI nr
Match: XP_023536686.1 (leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 315 bits (808), Expect = 7.86e-108
Identity = 169/177 (95.48%), Postives = 170/177 (96.05%), Query Frame = 0

Query: 1   MEHSTTTTLFFILLIVHLAGAAMPSDNHRLVEVVPPVSLLCISECSTCPVICAPPPPPTV 60
           MEHSTTTTLFFILLI  LAG AM SD+HRLVEVVPPVSLLCISECSTCPVICAPPPPPTV
Sbjct: 1   MEHSTTTTLFFILLIFPLAGPAMASDDHRLVEVVPPVSLLCISECSTCPVICAPPPPPTV 60

Query: 61  TLKSPPPVPHSPPMASFPLNPPPSPPRPTPSPPPPPVPVAASSHSPPPPAFKYYFSLPPP 120
           TLKSPPPVPHSPPMASFPLNPPPSPPRPTPSPPPPPVP A SSHSPPPPAFKYYFSLPPP
Sbjct: 61  TLKSPPPVPHSPPMASFPLNPPPSPPRPTPSPPPPPVPAATSSHSPPPPAFKYYFSLPPP 120

Query: 121 PPVLIPEPLPPTTAAPHGNTNAYNYYFYASNSCSLNSPAFLWALFLFHLVRVLVVVK 177
           PPVLIPEPLPPTTAAPHGNTNAYNYYFYASNSCSLNSPAFLWALFLFHLV VLVVVK
Sbjct: 121 PPVLIPEPLPPTTAAPHGNTNAYNYYFYASNSCSLNSPAFLWALFLFHLVCVLVVVK 177

BLAST of Csor.00g050990 vs. NCBI nr
Match: XP_023002897.1 (leucine-rich repeat extensin-like protein 3 [Cucurbita maxima])

HSP 1 Score: 275 bits (703), Expect = 5.41e-92
Identity = 144/148 (97.30%), Postives = 145/148 (97.97%), Query Frame = 0

Query: 23  MPSDNHRLVEVVPPVSLLCISECSTCPVICAPPPPPTVTLKSPPPVPHSPPMASFPLNPP 82
           M SD+HRLVEVVPPVSLLCISECSTCPVICAPPPPPTVTLKSPPPVPHSPPMASFPLNPP
Sbjct: 1   MASDDHRLVEVVPPVSLLCISECSTCPVICAPPPPPTVTLKSPPPVPHSPPMASFPLNPP 60

Query: 83  PSPPRPTPSPPPPPVPVAASSHSPPPPAFKYYFSLPPPPPVLIPEPLPPTTAAPHGNTNA 142
           PSPPRPTPSPPPPPVP  ASSHSPPPPAFKYYFSLPPPPPVLIPEPLPPTTAAPHGNTNA
Sbjct: 61  PSPPRPTPSPPPPPVPPVASSHSPPPPAFKYYFSLPPPPPVLIPEPLPPTTAAPHGNTNA 120

Query: 143 YNYYFYASNSCSLNSPAFLWALFLFHLV 170
           YNYYFYASNSCSLNSPAFLWALFLFHLV
Sbjct: 121 YNYYFYASNSCSLNSPAFLWALFLFHLV 148

BLAST of Csor.00g050990 vs. ExPASy TrEMBL
Match: A0A6J1GGS2 (extensin-3-like OS=Cucurbita moschata OX=3662 GN=LOC111454053 PE=4 SV=1)

HSP 1 Score: 325 bits (833), Expect = 5.88e-112
Identity = 173/177 (97.74%), Postives = 174/177 (98.31%), Query Frame = 0

Query: 1   MEHSTTTTLFFILLIVHLAGAAMPSDNHRLVEVVPPVSLLCISECSTCPVICAPPPPPTV 60
           MEHSTTTTLFFILLIVHLAGAAM SDNHRLVEVVPPVSLLCISECSTCPVICAPPPPPTV
Sbjct: 1   MEHSTTTTLFFILLIVHLAGAAMASDNHRLVEVVPPVSLLCISECSTCPVICAPPPPPTV 60

Query: 61  TLKSPPPVPHSPPMASFPLNPPPSPPRPTPSPPPPPVPVAASSHSPPPPAFKYYFSLPPP 120
           TLKSPPPVPHSPPMASFPLNPPPSPPRP+PSPPPPPVPVAASSHSPPPPAFKYYFSLPPP
Sbjct: 61  TLKSPPPVPHSPPMASFPLNPPPSPPRPSPSPPPPPVPVAASSHSPPPPAFKYYFSLPPP 120

Query: 121 PPVLIPEPLPPTTAAPHGNTNAYNYYFYASNSCSLNSPAFLWALFLFHLVRVLVVVK 177
           PPVLIPEPLPPTTAAPHGNTNAYNYYFYASNSCSLNSP FLWALFLFHLV VLVVVK
Sbjct: 121 PPVLIPEPLPPTTAAPHGNTNAYNYYFYASNSCSLNSPVFLWALFLFHLVCVLVVVK 177

BLAST of Csor.00g050990 vs. ExPASy TrEMBL
Match: A0A6J1KKV8 (leucine-rich repeat extensin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111496636 PE=4 SV=1)

HSP 1 Score: 275 bits (703), Expect = 2.62e-92
Identity = 144/148 (97.30%), Postives = 145/148 (97.97%), Query Frame = 0

Query: 23  MPSDNHRLVEVVPPVSLLCISECSTCPVICAPPPPPTVTLKSPPPVPHSPPMASFPLNPP 82
           M SD+HRLVEVVPPVSLLCISECSTCPVICAPPPPPTVTLKSPPPVPHSPPMASFPLNPP
Sbjct: 1   MASDDHRLVEVVPPVSLLCISECSTCPVICAPPPPPTVTLKSPPPVPHSPPMASFPLNPP 60

Query: 83  PSPPRPTPSPPPPPVPVAASSHSPPPPAFKYYFSLPPPPPVLIPEPLPPTTAAPHGNTNA 142
           PSPPRPTPSPPPPPVP  ASSHSPPPPAFKYYFSLPPPPPVLIPEPLPPTTAAPHGNTNA
Sbjct: 61  PSPPRPTPSPPPPPVPPVASSHSPPPPAFKYYFSLPPPPPVLIPEPLPPTTAAPHGNTNA 120

Query: 143 YNYYFYASNSCSLNSPAFLWALFLFHLV 170
           YNYYFYASNSCSLNSPAFLWALFLFHLV
Sbjct: 121 YNYYFYASNSCSLNSPAFLWALFLFHLV 148

BLAST of Csor.00g050990 vs. ExPASy TrEMBL
Match: A0A6J1BT26 (leucine-rich repeat extensin-like protein 3 OS=Momordica charantia OX=3673 GN=LOC111005088 PE=4 SV=1)

HSP 1 Score: 202 bits (514), Expect = 2.86e-63
Identity = 124/167 (74.25%), Postives = 135/167 (80.84%), Query Frame = 0

Query: 12  ILLIVHLAGAAMPSDNHRLVEVVPPVSLLCISECSTCPVICAPPPPPTVTLKSPPPVPHS 71
           ILLI+ LAGAA  S++HRLVEVVPPVSLLCISECSTCPVIC+PPPPPT  LKSPPP  HS
Sbjct: 15  ILLIIDLAGAAAASEDHRLVEVVPPVSLLCISECSTCPVICSPPPPPTAALKSPPP--HS 74

Query: 72  PPMASFPLNPPPSP--PRPTPSPPPPPVP-----VAASSHSPPPPAFKYYFSLPPPPPVL 131
           PP+A  PLN PPSP  PRPTPSP PPP P     +AA SH PPPPAF YYF+LPPPPPVL
Sbjct: 75  PPLAYVPLNAPPSPSPPRPTPSPSPPPPPPPSPPLAALSHPPPPPAFNYYFNLPPPPPVL 134

Query: 132 IPEPLPPTTAAPHGNTN--AYNYYFYASNSCSLNSPA-FLWALFLFH 168
           IP P+PP TAAPHGNTN  AYNYYFYAS S SL+ PA +L ALF+F 
Sbjct: 135 IPVPVPPKTAAPHGNTNSNAYNYYFYASKSSSLSLPATWLCALFVFQ 179

BLAST of Csor.00g050990 vs. ExPASy TrEMBL
Match: A0A5A7VEH7 (Classical arabinogalactan protein 9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00300 PE=4 SV=1)

HSP 1 Score: 192 bits (489), Expect = 1.91e-59
Identity = 127/185 (68.65%), Postives = 140/185 (75.68%), Query Frame = 0

Query: 1   MEHSTTTTLF---FILLIVHLAGAAMPSDNHRLVEVVPPVSLLCISECSTCPVICAPPPP 60
           MEH + T  F    ILLI+ LAGAA P D  R+V+VVPPVSLLCISECSTCP ICAPPPP
Sbjct: 1   MEHFSKTLHFSSILILLILPLAGAA-PEDG-RVVQVVPPVSLLCISECSTCPTICAPPPP 60

Query: 61  PTVTLKSPPPVPHSPPMASFPLNPPP-----SPPRPTPSPPPPPVPVAA-SSHSPPPPAF 120
           P   LKSPPPVPH PP+A FPLN PP     SPP P+PSPPPPP    A SSHSPPPPAF
Sbjct: 61  PPTVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPPPPATATAVSSHSPPPPAF 120

Query: 121 KYYFSLPPPPPVLIPEPLPPT-TAAPHGNTN--AYNYYFYA--SNSCSLNSP-AFLWALF 170
           +YYF+LPPPPPVLIP P+PP+ TAAP GNTN  AYNYYFYA  S+S   + P AF W LF
Sbjct: 121 RYYFNLPPPPPVLIPVPVPPSATAAPRGNTNSNAYNYYFYAPASSSAPPSLPTAFFWGLF 180

BLAST of Csor.00g050990 vs. ExPASy TrEMBL
Match: A0A0A0KD44 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G363610 PE=4 SV=1)

HSP 1 Score: 184 bits (466), Expect = 6.30e-56
Identity = 125/186 (67.20%), Postives = 137/186 (73.66%), Query Frame = 0

Query: 1   MEHSTTTTLF---FILLIVHLAGAAMPSDNHRLVEVVPPVSLLCISECSTCPVICAPPPP 60
           MEH + T  F    ILLI+ LA A +P D  R+VEVVPPVSLLCISECSTCP ICAPPPP
Sbjct: 1   MEHFSKTLHFSSILILLILRLARA-VPEDG-RVVEVVPPVSLLCISECSTCPTICAPPPP 60

Query: 61  PT--VTLKSPPPVPHSPPMASFPLNPPP-----SPPRPTPSPPPPPVPVAA-SSHSPPPP 120
           P   + LKSPPPVPH PP+A FPLN PP     SPP P PSPPPPP    A SSHSPPPP
Sbjct: 61  PPPPIVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPWPSPPPPPATATAVSSHSPPPP 120

Query: 121 AFKYYFSLPPPPPVLIPEPLPPT-TAAPHGNTN--AYNYYFYA--SNSCSLNSP-AFLWA 169
           AF+YYF+LPPPPPVLIP P+PP+ TA PHGNTN  AYNYYFYA  S+S   + P A  W 
Sbjct: 121 AFRYYFNLPPPPPVLIPVPVPPSATAGPHGNTNSNAYNYYFYAPASSSAPPSLPTALFWG 180

BLAST of Csor.00g050990 vs. TAIR 10
Match: AT5G11990.1 (proline-rich family protein )

HSP 1 Score: 59.3 bits (142), Expect = 3.6e-09
Identity = 70/178 (39.33%), Postives = 92/178 (51.69%), Query Frame = 0

Query: 9   LFFILLIVHLAGAAMPSDNHRLVEVVPPVSLLCISECSTCPVICAPPPPPTVTLKSPPPV 68
           +  I L++ +  A+ PSD      V+ P   LCISECSTCP IC+PPP       SPPP 
Sbjct: 5   VIIIALVMVMVVASSPSDQ---TNVLTP---LCISECSTCPTICSPPPSKPSPSMSPPPS 64

Query: 69  PHSPPMASFPLNPPP---SPPRPTPSPPPPPVPVAASSHSPPPPAFKYYFSLPPPPPVL- 128
           P S P++S P  PPP   SPP  + S  PPP+        PPPP F Y+ S PPPPP+  
Sbjct: 65  P-SLPLSSSPPPPPPHKHSPPPLSQSLSPPPLITVI---HPPPPRFYYFESTPPPPPLSP 124

Query: 129 ----IPEPLPPTTAAPHGNTNA---------YNYYFYASNSCSLNSPAFLWALFLFHL 170
                P  +P +  +P G +           Y Y++ ASN+  L S +FL AL +  L
Sbjct: 125 DGKGSPPSVPSSPPSPKGQSQGQQQPPYPFPYFYFYTASNATLLFSSSFLIALVVSSL 172

BLAST of Csor.00g050990 vs. TAIR 10
Match: AT4G13340.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 44.7 bits (104), Expect = 9.2e-05
Identity = 45/95 (47.37%), Postives = 51/95 (53.68%), Query Frame = 0

Query: 46  STCPVICAPPP--PPTVTLKSPPPVPHSPPMASFPLNPPPSPPRP--TPSPPPPPVPVAA 105
           ST P + +PPP  PP      PPP P  PP+ S P  PPP PP P  +P PPPPP P   
Sbjct: 418 STPPTLTSPPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPP 477

Query: 106 SSHSPPPPAFKYYFSLPPPPPVLIPEPLPPTTAAP 137
             +SPPPP+       PPPPPV  P P PP    P
Sbjct: 478 PVYSPPPPS-----PPPPPPPVYSPPPPPPPPPPP 507

BLAST of Csor.00g050990 vs. TAIR 10
Match: AT5G07740.1 (actin binding )

HSP 1 Score: 44.3 bits (103), Expect = 1.2e-04
Identity = 43/92 (46.74%), Postives = 48/92 (52.17%), Query Frame = 0

Query: 54   PPPPPTVTLKSPPPVPHSPPMASFPLNPPPSPP-RPTPSPPPPPVPVAASSHSPPPPAFK 113
            PPPPP  +  SPPP P  PP    P  PPP PP   +P PPPPP P   S   PPPP F 
Sbjct: 979  PPPPPPPSYGSPPPPPPPPPSYGSPPPPPPPPPGYGSPPPPPPPPPSYGSPPPPPPPPFS 1038

Query: 114  YYFSLPPPPPVLIPEPL------PPTTAAPHG 139
            +  S+PPPPP   P P+      PP     HG
Sbjct: 1039 HVSSIPPPPP---PPPMHGGAPPPPPPPPMHG 1067

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6585753.12.66e-115100.00hypothetical protein SDJN03_18486, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7020664.17.63e-11599.44hypothetical protein SDJN02_17350, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022951103.11.21e-11197.74extensin-3-like [Cucurbita moschata][more]
XP_023536686.17.86e-10895.48leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo][more]
XP_023002897.15.41e-9297.30leucine-rich repeat extensin-like protein 3 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A6J1GGS25.88e-11297.74extensin-3-like OS=Cucurbita moschata OX=3662 GN=LOC111454053 PE=4 SV=1[more]
A0A6J1KKV82.62e-9297.30leucine-rich repeat extensin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1BT262.86e-6374.25leucine-rich repeat extensin-like protein 3 OS=Momordica charantia OX=3673 GN=LO... [more]
A0A5A7VEH71.91e-5968.65Classical arabinogalactan protein 9-like OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A0A0KD446.30e-5667.20Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G363610 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G11990.13.6e-0939.33proline-rich family protein [more]
AT4G13340.19.2e-0547.37Leucine-rich repeat (LRR) family protein [more]
AT5G07740.11.2e-0446.74actin binding [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..104

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g050990.m01Csor.00g050990.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane