Csor.00g049850 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGCGGAGAGGCACGCCTCTTCGCGCGCAACATCATCTCAAGACAACGCGATGTAAAATTTTCCATAAATTTCAATCGTTTGATTGCATTTATTCTGTTTATTTCAAGCGTCCGATTGTTTGAATTCAGACTCCGCTATGTCTATGTTTTTGGAAATTTCAATTTTAGTTATTCCTCTGTAGTATTCTTCGTGATTTCAGTACGAATCCGACTGTCGAATGTTGAATCGACTTGCCTGAATGTTTTTGGATGATGAATCGGCTAATTTAGGGGATCATCATAGCTTTATAATCAAGGAATACTATCTCCATTGGAATGAGGTCTTTTGGGAAGCCCAAAGGAAAGCCACGAGAGCTTATGTTCAAAGTGGACAATATCATATCATTGTGGAGAGTTGTGTTCGTCTAACACTCTGTAGTATTATTCGTGATTTCAGTACGAATCCGACTGCCGAATGTTGAATTGACTCGCCTGAATGTTTTTTACTGTCTATCTTCCTTCGGTATTGATAGTTCCTTCATTGGACTGGTACAGGTTTCTTGATATACTGCATGAGGCCCCGTTATTTGGTCATCGGAAGCCTGCAAGAACAATTGGGAGCATAATTTATTGTCTTGTTTTGGCAAGTATAATCTCCATCTAAATGAACCAAAATCCATTTGTAATTCTAGTTAGGGAAAGTTCGATAGTTCTTGAATTGGCTGGCTTACTGTATTACTTTGCTTGAAAAGGCTGAAATGATTGCGTTTCTCCCCGATTTAGGTTGGCTATGCTGCTCTGGCTATTGGAGCACCATGGATTTTTCATCCTATAAAGCACTTGGTTGAACCGTTGCTCTGCAGTTGTGATGTTGTTCTGTTGATGCTCACAGGTGTTCTAATAAAGTCCAGAGCTATACTTACTCAGATAAACTAAAACTAACTATTTTCTGACGAAGTGACAATGTTATTTTCTGTTATTTATGTAGCCAGTTTACTTTTCGTCATTGCAAGGCTAAAAGTTTCTATTTAGTTCATTCTTAGGAATTCGAGCTGTTGAACTCGATTATTTTAACTCAACATCTTGACATATAATTTTTTTTTGCTCAATAATTCAACTAAAGAGATATGGTTATAGAACTTTATACTTGTTTAGAAATTAAACCGCGGTTTACTATTTCAGGTATCTTTCAGCAGTATCTAGTATATCAAGTTCATAAAATTCGTTTGCAGGTACTTACATTTATCAATGAAGAACTTTTTTTTGCTTCCTCTTTCCTTTGAAAATTTGAAGAGGTTGAAGGTTTTAAAGATTGAAGTTGCGATATGAACTAAAAGTACTATTGATTGATATTGGTGATGAAGAGAAAATGTTTTCCTTAGTGATGACTTCGTTTTCTGTTGGCTGAATGATCGTGATCTGCTAGATTAGTTATTTCTGTTGCAATATGTTTTCTTGAAGGAAGCCTGTCTTTTGGTCAATCTGGTGTTTCATTTCATGTTCTGTGGTTTACAATGCATTTGAATGGATTTTTTTTTTTTTTCCTTTCTCATTTGCAGGGTTATTATAGCTTTAGCCAGAAGTTAAAGCATATTGTTCGTCTACCTTTCGCAGTTACTGCATATGGTATGTTAGATAGCTGTGCTGACTCAGTCTTTAAAAATTTTCACATTTTTGTGGTGTTGCTAAATGCCACATGGCAATGAAGCGTTTTCACCTGTTTTACATTTTTCGACGATGGTGGATCCCGATTTTAAATAATTGTTCAATATCAGGAACTGCTGCCCTTTTACTCGTCATGGTATGGGAACCTCAAATCAGTGCACTTTCGATTCCCCTAATTCTGAGGTAGTGAGGTTATACATGTGAATGTTGTCTAGTAGTTTTTCCAGTTAACTGTTATTTACTTTCATTCCCTTCATCGTCACCTTCCCATGGCGATATCTTTTATTAAGACCATGTATCTGATCACCCAAAGATGTTCTATTTATATTTTCTGGATTTTATTACAACCATGGATGTTCCATTATTATCATATTCTGACTGTATGCAAATGTCCTCCGTTAATTTTCCATTTTTTGTCATTTTGTTGCTTATTGATCGTATCATTAGAAGCTTCTCCTTTCAAAGCTTACTCCTTAGTTTACATACTTAATCCATGTCCCCATCTTTAGCTAGCTGTACACTACTGACAAAATGTTGTGCTGGATGCCCCTTTTATATCTGCAGGATGATTATGTTAATTGAAGCAGTATGTGCTGGATCGTTTATGGTTATATATATCAGTAAGTTTTATGTATTCATGGGATCTCTTCAGGAGTTGATTGGTACCAATAGTGTTTTCGTTTATTGAATTATTTGTTATTTTTACTCATTTTCTTAGGTCAGTAAGTTCCTTTCATTATAGAGAAACTGTGACTTTGTAATTTGGAGAGTAACATGTTATTGGATGTAGGCTTAGTTTCGGATTGCCGTAAGTTTTAAAATAATCAATTGCAGCTTTTAGAAAAAACTAACTGTGATATGAATTAAATCAATGTTTGGTAAATTTCGTACTTGAACGTGAAAAAGGTATAATAAAATGGAAACTTTTACAAATTTGATGTGATTAATATTGTCATGCGTGCAATGCAGGTTATGTACAAAAGTACAATTCATTAAATTCTCAGCCTGATGTTTTGAAGTCATTGTATTCCCCACTTCAGCAATCAACTTCTTTGGAAGATCTAAGGTTATATTAAACTGATCACTATACGCTGCTCTTTAGTCTGTATTAGAGTCTAGGTAGTCACTGTGTCTTAGAAAATAATTGTTCAAATACATTTTCGCTAAACCTATTTGATTCTAATTGATTATGAGTTTTTTGGGAAGTTACATTTTTCTCCTATGAAAATAGTGGTAACTTCAGATGACTCGATTTTTTCTTCACATGAATAAAGATTAAGAATTCTTTGGTGGAACAGGTATCATGATGTCGGACGACTTTCTGATCAGCAAATGGCTCTGTTGCAATATCAGCGAGAGAACCTTCATTTTCTAAATGAGGAGGTATATAGTAACCTTATACACATACTTACCTCAAGATGGTTTGGCACCCAGCCGCTTCCTTTCGTCATGCTCTTCTCCCTGTTCCTATTAGAAAGAGCTCATTCAATTGGTAAAGTAGATATTTAGTACCCATTAGATGTCTAGCCTGTAACCTTTGTTCCTGAACCTCTCAGATTCTTCGGTTGCAAGAGTGCTTAAGTAAATATGAACGGTCTAGCGATGGAAGCACTCCTCAGGTGATCATTGTTAATCTGATATTTGATGTTTTTTTTAGATTTTATCTGTATAGTACTTGTATAACTAAAGTTTGTACTGGTTTGTAAGATATCATTCATGTGTCGAGCCTAAGAAGCACAAACACAAGCATGACGACACGACAATGTCTTAAATGAAGTAGGACACAAACATGTTGGAGAGATGTTTCTTTTTAGAATATGCCTATATTGGTATATTTAATATTTCATAATAAATACAAAGAAAGTAAATTCAACATAAATATCGTTTGATCTTGAAGTGTTAGTGTTGGATGTGTTTTTAGATAATATTGTCGTTTGATCTTGAAGTCTCCTGGTTTTGTTATCTACTTCATTAGAGTATCTGAAAATGAAAATTTTCTCACATGATAGTCAAGGATGAAGGAATATGTGAAGGAATGTAATATGAATGAAAATGGCTGTAGTTACCGGTGGCTCCTTTTTCAGGTTGACCTTGCCCATATGCTAGCTGCTCGTGACCAGGAATTGAGGACACTTTCAGCTGAGGTATGTCTTGCATACAGTACTATGGTTATGCTTTTATTTCATTTTTAATAACATCCAACTTCTGTGCATTCAACTAATTTCTTGGGATGTCAGATCCTACTTGTATTATTTAAAGATATTCGGTTTTACTGTCCTGTTTTTTTCACTCGGCCAACTTATGCTGGTTTGCTGTGGGTGTGCTTCCATGACCTTGAAGTATATTGTCAGCTTAAATTGTTGTTTAACAACTCAAATTCACCACTAGCCGACATTGTCCTTTTTAGGCTTTTCCTTTTGGGCTTCCCCTCAAAATTTTTAAAATGCGTCTGCTAGTGAGAGGTTTCTACATTCTTGTAAAGAATGTTTCGTTTCCCTCTCCAATCGATGTGGGATCTCACAATCCACCTCACTTCGGGGCCTAACGTCCTCATTAGCACTTGTTTCCCTCTTCCTATTGATGTGAGATCTCACAATCTACCCCCCTTCGAGATCCAATATCCTCGTTGACACGTCGCTTGGTGTCCACCCCCTCTGGGGCTCAGTGTCCTTGCTGACATATGGCCTGGAGTCTGGCTCTAATACCATTTGTAACGGCCCAAGCCTACCACTAGTAGATAGTGTCCTCTTTGGATTAGAGAGAAGTTTCTACATCCTTGTAAAGTATTCTTCGTTCCGCTCTCCAACCGATGTGGGATCTCACAGAAATTACTTTGACCACACCAGCAATCATAATTTTCCGTAACAATTGAATTATATGTTGCAGATGAATCAGGTAACATCAGAACTTAGGCTTGCTCGATCTGTGATAGCTGAGAGGGATACCGAGATCCAGAAATTACTCATCACCAACAAGCAGGTACTAATTTGAACATCATCCAACCCGACGTCCTCTCACACATTGCATATGGACAAAACCTTCTATCTGTGAATTTAACATCTTGCCATCCATGAATAGTATGTAGAAGAAAATGAAAGACTGAGAGCTATTCTAGGAGAATGGAGTACACGAGCTGCTAAGGTACATCACTGCTTATTCTACTACCTTCATTTGATGGAACAAATAATATCTTGAATTCGCTAAAGCAATGACCTTTTATCGTTGCGCCAAAGCTTGAGAGAGCGCTTGAAGGCGAGCGTTTATCAAATAATGAATTGCAAAGGAGGATTTCAACACTAAAAAAGCATCAGAGCAGCAGGGGAGTTGATGCCTAA ATGGCAGCGGAGAGGCACGCCTCTTCGCGCGCAACATCATCTCAAGACAACGCGATGTTTCTTGATATACTGCATGAGGCCCCGTTATTTGGTCATCGGAAGCCTGCAAGAACAATTGGGAGCATAATTTATTGTCTTGTTTTGGTTGGCTATGCTGCTCTGGCTATTGGAGCACCATGGATTTTTCATCCTATAAAGCACTTGGTTGAACCGTTGCTCTGCAGTTGTGATGTTGTTCTGTTGATGCTCACAGGTATCTTTCAGCAGTATCTAGTATATCAAGTTCATAAAATTCGTTTGCAGGGTTATTATAGCTTTAGCCAGAAGTTAAAGCATATTGTTCGTCTACCTTTCGCAGTTACTGCATATGGAACTGCTGCCCTTTTACTCGTCATGGTATGGGAACCTCAAATCAGTGCACTTTCGATTCCCCTAATTCTGAGGATGATTATGTTAATTGAAGCAGTATGTGCTGGATCGTTTATGGTTATATATATCAGTTATGTACAAAAGTACAATTCATTAAATTCTCAGCCTGATGTTTTGAAGTCATTGTATTCCCCACTTCAGCAATCAACTTCTTTGGAAGATCTAAGGTATCATGATGTCGGACGACTTTCTGATCAGCAAATGGCTCTGTTGCAATATCAGCGAGAGAACCTTCATTTTCTAAATGAGGAGATTCTTCGGTTGCAAGAGTGCTTAAGTAAATATGAACGGTCTAGCGATGGAAGCACTCCTCAGGTTGACCTTGCCCATATGCTAGCTGCTCGTGACCAGGAATTGAGGACACTTTCAGCTGAGATGAATCAGGTAACATCAGAACTTAGGCTTGCTCGATCTGTGATAGCTGAGAGGGATACCGAGATCCAGAAATTACTCATCACCAACAAGCAGTATGTAGAAGAAAATGAAAGACTGAGAGCTATTCTAGGAGAATGGAGTACACGAGCTGCTAAGCTTGAGAGAGCGCTTGAAGGCGAGCGTTTATCAAATAATGAATTGCAAAGGAGGATTTCAACACTAAAAAAGCATCAGAGCAGCAGGGGAGTTGATGCCTAA ATGGCAGCGGAGAGGCACGCCTCTTCGCGCGCAACATCATCTCAAGACAACGCGATGTTTCTTGATATACTGCATGAGGCCCCGTTATTTGGTCATCGGAAGCCTGCAAGAACAATTGGGAGCATAATTTATTGTCTTGTTTTGGTTGGCTATGCTGCTCTGGCTATTGGAGCACCATGGATTTTTCATCCTATAAAGCACTTGGTTGAACCGTTGCTCTGCAGTTGTGATGTTGTTCTGTTGATGCTCACAGGTATCTTTCAGCAGTATCTAGTATATCAAGTTCATAAAATTCGTTTGCAGGGTTATTATAGCTTTAGCCAGAAGTTAAAGCATATTGTTCGTCTACCTTTCGCAGTTACTGCATATGGAACTGCTGCCCTTTTACTCGTCATGGTATGGGAACCTCAAATCAGTGCACTTTCGATTCCCCTAATTCTGAGGATGATTATGTTAATTGAAGCAGTATGTGCTGGATCGTTTATGGTTATATATATCAGTTATGTACAAAAGTACAATTCATTAAATTCTCAGCCTGATGTTTTGAAGTCATTGTATTCCCCACTTCAGCAATCAACTTCTTTGGAAGATCTAAGGTATCATGATGTCGGACGACTTTCTGATCAGCAAATGGCTCTGTTGCAATATCAGCGAGAGAACCTTCATTTTCTAAATGAGGAGATTCTTCGGTTGCAAGAGTGCTTAAGTAAATATGAACGGTCTAGCGATGGAAGCACTCCTCAGGTTGACCTTGCCCATATGCTAGCTGCTCGTGACCAGGAATTGAGGACACTTTCAGCTGAGATGAATCAGGTAACATCAGAACTTAGGCTTGCTCGATCTGTGATAGCTGAGAGGGATACCGAGATCCAGAAATTACTCATCACCAACAAGCAGTATGTAGAAGAAAATGAAAGACTGAGAGCTATTCTAGGAGAATGGAGTACACGAGCTGCTAAGCTTGAGAGAGCGCTTGAAGGCGAGCGTTTATCAAATAATGAATTGCAAAGGAGGATTTCAACACTAAAAAAGCATCAGAGCAGCAGGGGAGTTGATGCCTAA MAAERHASSRATSSQDNAMFLDILHEAPLFGHRKPARTIGSIIYCLVLVGYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRLQGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRYHDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLITNKQYVEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKKHQSSRGVDA Homology
BLAST of Csor.00g049850 vs. ExPASy Swiss-Prot
Match: Q8S8K9 (Protein FIP1 OS=Arabidopsis thaliana OX=3702 GN=FIP1 PE=1 SV=1) HSP 1 Score: 468.8 bits (1205), Expect = 5.5e-131 Identity = 246/346 (71.10%), Postives = 292/346 (84.39%), Query Frame = 0
BLAST of Csor.00g049850 vs. NCBI nr
Match: XP_022933192.1 (uncharacterized protein LOC111440041 isoform X1 [Cucurbita moschata] >KAG6588083.1 Protein FIP1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 665 bits (1715), Expect = 3.28e-240 Identity = 353/353 (100.00%), Postives = 353/353 (100.00%), Query Frame = 0
BLAST of Csor.00g049850 vs. NCBI nr
Match: XP_022967730.1 (uncharacterized protein LOC111467166 isoform X1 [Cucurbita maxima]) HSP 1 Score: 664 bits (1714), Expect = 4.66e-240 Identity = 352/353 (99.72%), Postives = 353/353 (100.00%), Query Frame = 0
BLAST of Csor.00g049850 vs. NCBI nr
Match: XP_023530740.1 (uncharacterized protein LOC111793195 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 663 bits (1710), Expect = 1.90e-239 Identity = 351/353 (99.43%), Postives = 353/353 (100.00%), Query Frame = 0
BLAST of Csor.00g049850 vs. NCBI nr
Match: XP_038879093.1 (protein FIP1-like isoform X1 [Benincasa hispida]) HSP 1 Score: 628 bits (1620), Expect = 1.14e-225 Identity = 330/344 (95.93%), Postives = 339/344 (98.55%), Query Frame = 0
BLAST of Csor.00g049850 vs. NCBI nr
Match: XP_008450924.1 (PREDICTED: uncharacterized protein LOC103492369 [Cucumis melo]) HSP 1 Score: 628 bits (1620), Expect = 1.14e-225 Identity = 331/344 (96.22%), Postives = 339/344 (98.55%), Query Frame = 0
BLAST of Csor.00g049850 vs. ExPASy TrEMBL
Match: A0A6J1EZ32 (uncharacterized protein LOC111440041 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111440041 PE=3 SV=1) HSP 1 Score: 665 bits (1715), Expect = 1.59e-240 Identity = 353/353 (100.00%), Postives = 353/353 (100.00%), Query Frame = 0
BLAST of Csor.00g049850 vs. ExPASy TrEMBL
Match: A0A6J1HVA3 (uncharacterized protein LOC111467166 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467166 PE=3 SV=1) HSP 1 Score: 664 bits (1714), Expect = 2.26e-240 Identity = 352/353 (99.72%), Postives = 353/353 (100.00%), Query Frame = 0
BLAST of Csor.00g049850 vs. ExPASy TrEMBL
Match: A0A1S3BRE8 (uncharacterized protein LOC103492369 OS=Cucumis melo OX=3656 GN=LOC103492369 PE=3 SV=1) HSP 1 Score: 628 bits (1620), Expect = 5.53e-226 Identity = 331/344 (96.22%), Postives = 339/344 (98.55%), Query Frame = 0
BLAST of Csor.00g049850 vs. ExPASy TrEMBL
Match: A0A5A7UKR5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G001600 PE=3 SV=1) HSP 1 Score: 624 bits (1610), Expect = 1.84e-224 Identity = 329/344 (95.64%), Postives = 337/344 (97.97%), Query Frame = 0
BLAST of Csor.00g049850 vs. ExPASy TrEMBL
Match: A0A0A0M261 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G596510 PE=3 SV=1) HSP 1 Score: 624 bits (1609), Expect = 2.62e-224 Identity = 328/344 (95.35%), Postives = 337/344 (97.97%), Query Frame = 0
BLAST of Csor.00g049850 vs. TAIR 10
Match: AT2G06005.1 (FRIGIDA interacting protein 1 ) HSP 1 Score: 468.8 bits (1205), Expect = 3.9e-132 Identity = 246/346 (71.10%), Postives = 292/346 (84.39%), Query Frame = 0
BLAST of Csor.00g049850 vs. TAIR 10
Match: AT5G20580.2 (BEST Arabidopsis thaliana protein match is: FRIGIDA interacting protein 1 (TAIR:AT2G06005.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 438.0 bits (1125), Expect = 7.4e-123 Identity = 234/344 (68.02%), Postives = 282/344 (81.98%), Query Frame = 0
BLAST of Csor.00g049850 vs. TAIR 10
Match: AT5G20580.1 (BEST Arabidopsis thaliana protein match is: FRIGIDA interacting protein 1 (TAIR:AT2G06005.1); Has 167 Blast hits to 167 proteins in 73 species: Archae - 0; Bacteria - 25; Metazoa - 58; Fungi - 25; Plants - 43; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). ) HSP 1 Score: 434.5 bits (1116), Expect = 8.2e-122 Identity = 233/344 (67.73%), Postives = 281/344 (81.69%), Query Frame = 0
BLAST of Csor.00g049850 vs. TAIR 10
Match: AT2G06005.2 (FRIGIDA interacting protein 1 ) HSP 1 Score: 363.6 bits (932), Expect = 1.8e-100 Identity = 200/286 (69.93%), Postives = 235/286 (82.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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