Csor.00g049790 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g049790
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr11: 3701277 .. 3702099 (+)
RNA-Seq ExpressionCsor.00g049790
SyntenyCsor.00g049790
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTAGGAAAGGGTGCCATAGATCATATGACGAATCAGCATCTCGAGCTAGACAAAGAGGAAACTACAGATTAATGTAATGTAAACACTGAATCATATACATTGAAAAATAAAAGCTCCAAGGCAAGCCAGTTGAACAAATGGGGAAAAGAAAACTACCTGACATTTCATCAAACAGTTGGTGTGCGTGTGAGCGTGACCACGGGTTTAAGACTGAGGGGGGGTACCCGGGCCTCATATCAAATCAAATAGTGATGAAAAGCAGCCAATATCTGGCCCATTGTTAGGTCTTGGACAATCACATGAACAGAACAGGAGGGAGCGATATGGGCCTCTGGAAATCTGGGAACTGAAGGCGACGGAGGGGGTCTAGTCTACTCTTATATTTGGATCGTCGAACGGATTGGCAACAGATGAAGAAGACAAAAAAGGAAGTGGGGCAGTGACGTATCCGATTGAAGAAACAGTGCCAGATTCGAAGCTCGAGGTCAAATTCAATTCCCTTTACGCTATCGCTGAAGCTCCGAATTCTGAATTTCTGATGGACTCTGTAGCTCGCCGGTGATTTCTACCAATGTTCGGCCACAGCCACCAGTTTCGAGAACAATCGACACTGCAGCAGCTCGGCGGAGCCTGGAGGAGCAGAGTAGGACCCATTATGGGTACTCGTGTTTCTTATCGAACTTCTACATTCTCTGCCAAGGGGCTTATGTGTTTGAAATTCGAAAATGGCGGTTTCGGGATGAAGATCGAAATCTATCGTTACTCCGGCATATGAACTTGATTTTCCCATGGAAGTACCGACTGATTTCTGGTTCTTGA

mRNA sequence

ATGCCTAGGAAAGGGTGCCATAGATCATATGACGAATCAGCATCTCGAGCTAGACAAAGAGGAAACTACAGATTAATCTCGCCGGTGATTTCTACCAATGTTCGGCCACAGCCACCAGTTTCGAGAACAATCGACACTGCAGCAGCTCGGCGGAGCCTGGAGGAGCAGAGTAGGACCCATTATGGGTACTCGTGTTTCTTATCGAACTTCTACATTCTCTGCCAAGGGGCTTATGTGTTTGAAATTCGAAAATGGCGGTTTCGGGATGAAGATCGAAATCTATCGTTACTCCGGCATATGAACTTGATTTTCCCATGGAAGTACCGACTGATTTCTGGTTCTTGA

Coding sequence (CDS)

ATGCCTAGGAAAGGGTGCCATAGATCATATGACGAATCAGCATCTCGAGCTAGACAAAGAGGAAACTACAGATTAATCTCGCCGGTGATTTCTACCAATGTTCGGCCACAGCCACCAGTTTCGAGAACAATCGACACTGCAGCAGCTCGGCGGAGCCTGGAGGAGCAGAGTAGGACCCATTATGGGTACTCGTGTTTCTTATCGAACTTCTACATTCTCTGCCAAGGGGCTTATGTGTTTGAAATTCGAAAATGGCGGTTTCGGGATGAAGATCGAAATCTATCGTTACTCCGGCATATGAACTTGATTTTCCCATGGAAGTACCGACTGATTTCTGGTTCTTGA

Protein sequence

MPRKGCHRSYDESASRARQRGNYRLISPVISTNVRPQPPVSRTIDTAAARRSLEEQSRTHYGYSCFLSNFYILCQGAYVFEIRKWRFRDEDRNLSLLRHMNLIFPWKYRLISGS
Homology
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BLAST of Csor.00g049790 vs. NCBI nr
Match: KAG6588089.1 (hypothetical protein SDJN03_16654, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 238 bits (606), Expect = 4.49e-79
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0 

Query: 1   MPRKGCHRSYDESASRARQRGNYRLISPVISTNVRPQPPVSRTIDTAAARRSLEEQSRTH 60
           MPRKGCHRSYDESASRARQRGNYRLISPVISTNVRPQPPVSRTIDTAAARRSLEEQSRTH
Sbjct: 1   MPRKGCHRSYDESASRARQRGNYRLISPVISTNVRPQPPVSRTIDTAAARRSLEEQSRTH 60

Query: 61  YGYSCFLSNFYILCQGAYVFEIRKWRFRDEDRNLSLLRHMNLIFPWKYRLISGS 114
           YGYSCFLSNFYILCQGAYVFEIRKWRFRDEDRNLSLLRHMNLIFPWKYRLISGS
Sbjct: 61  YGYSCFLSNFYILCQGAYVFEIRKWRFRDEDRNLSLLRHMNLIFPWKYRLISGS 114

The following BLAST results are available for this feature:
BLAST of Csor.00g049790 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g049790 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6588089.14.49e-79100.00hypothetical protein SDJN03_16654, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g049790 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g049790 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g049790.m01Csor.00g049790.m01mRNA