Csor.00g049720 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g049720
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
LocationCsor_Chr11: 3728561 .. 3729658 (-)
RNA-Seq ExpressionCsor.00g049720
SyntenyCsor.00g049720
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCCTCTCCATTTCTTCCACTGCGCTCTCAACTCTCCCAATCAGGTAAACCCAAAATCCCATTTATTTCACTAATTTCTCCAATTTTTCATTCTCAAATTTCTGTTTCTCAGCAGAGAATCATCCCACAGCCACCATAAAGCACTTAATTTCCCCGGAAAATTCCCAAAATACAATCTCCGGCGAGGTTCTACTCATCTGAACGCTGCAAAATCCGGCGTATCTAGCGTCTGTGAACCGCTCCCTCCAGATCGACCCCTCTGGTTCCCCGGCAGCACCCCCCCTGAGTGGCTCGACGGCAGGTTAATCCTAACTTCCCCACTCCTAATTCGTTCTATCTTGATGAATGTTTAAGCTCTTTCTCGCTTTGCAGCCTTCCAGGCGATTTCGGGTTCGACCCACTTGGATTGGGTACGCCCTTCTCTCGTTCTTTGATTCATTTTAAATTTCTTTGTTGCTGTTCGAAAATTTCATACTCTGTGATGGTCAGGATCCGACCCAGAGCTCCTAAAATGGTTCGCACAAGCGGAGCTAATGCACGCGAGATGGGCAATGCTCGCAGTGGCCGGAATTCTCCTCCCCGAATGGTTCGAGAGCTTAGGACTGATTCACAATTTCTCCTGGTACGACGCCGGAACGCGAGAATACTTTGCAGACCCGACGACATTGCTGGTGGCTCAATTGGGTCTAATGGGGTGGGTAGAGGGGCGGCGGTGGGCGGACATGGTTAACCCAGGCAGCGTCGACGTGGACCTCAAACTACCTCACAAGAAAAAGCCAACACCGGACGTGGGCTACCCCGGCGGGTTCTGGTTCGACCCGATGATGTGGGGCAGGGGATCGCCGGAGCCGGTCATGGTGCTGCGGACTAAGGAGATCAAGAACGGGCGGCTGGCGATGCTGGCGTTTGTCGGACTGTGGTTTCAGGCTATTTATACAGGGCAGGGTCCGCTGGAGAATCTCGCCGCCCACGTTGCCGATCCCGGCCACTGCAACATCTTCTCGGTAACGACAGTACTTGTCATGAATCTTGGGTCTTAGCTATGGCTAATGGAAATTGTTGTTCTTGCAGGCATTCAGCTCCGGTGGAATTTGA

mRNA sequence

ATGGCCCTCTCCATTTCTTCCACTGCGCTCTCAACTCTCCCAATCAGAGAATCATCCCACAGCCACCATAAAGCACTTAATTTCCCCGGAAAATTCCCAAAATACAATCTCCGGCGAGGTTCTACTCATCTGAACGCTGCAAAATCCGGCGTATCTAGCGTCTGTGAACCGCTCCCTCCAGATCGACCCCTCTGGTTCCCCGGCAGCACCCCCCCTGAGTGGCTCGACGGCAGCCTTCCAGGCGATTTCGGGTTCGACCCACTTGGATTGGGATCCGACCCAGAGCTCCTAAAATGGTTCGCACAAGCGGAGCTAATGCACGCGAGATGGGCAATGCTCGCAGTGGCCGGAATTCTCCTCCCCGAATGGTTCGAGAGCTTAGGACTGATTCACAATTTCTCCTGGTACGACGCCGGAACGCGAGAATACTTTGCAGACCCGACGACATTGCTGGTGGCTCAATTGGGTCTAATGGGGTGGGTAGAGGGGCGGCGGTGGGCGGACATGGTTAACCCAGGCAGCGTCGACGTGGACCTCAAACTACCTCACAAGAAAAAGCCAACACCGGACGTGGGCTACCCCGGCGGGTTCTGGTTCGACCCGATGATGTGGGGCAGGGGATCGCCGGAGCCGGTCATGGTGCTGCGGACTAAGGAGATCAAGAACGGGCGGCTGGCGATGCTGGCGTTTGTCGGACTGTGGTTTCAGGCTATTTATACAGGGCAGGGTCCGCTGGAGAATCTCGCCGCCCACGTTGCCGATCCCGGCCACTGCAACATCTTCTCGGCATTCAGCTCCGGTGGAATTTGA

Coding sequence (CDS)

ATGGCCCTCTCCATTTCTTCCACTGCGCTCTCAACTCTCCCAATCAGAGAATCATCCCACAGCCACCATAAAGCACTTAATTTCCCCGGAAAATTCCCAAAATACAATCTCCGGCGAGGTTCTACTCATCTGAACGCTGCAAAATCCGGCGTATCTAGCGTCTGTGAACCGCTCCCTCCAGATCGACCCCTCTGGTTCCCCGGCAGCACCCCCCCTGAGTGGCTCGACGGCAGCCTTCCAGGCGATTTCGGGTTCGACCCACTTGGATTGGGATCCGACCCAGAGCTCCTAAAATGGTTCGCACAAGCGGAGCTAATGCACGCGAGATGGGCAATGCTCGCAGTGGCCGGAATTCTCCTCCCCGAATGGTTCGAGAGCTTAGGACTGATTCACAATTTCTCCTGGTACGACGCCGGAACGCGAGAATACTTTGCAGACCCGACGACATTGCTGGTGGCTCAATTGGGTCTAATGGGGTGGGTAGAGGGGCGGCGGTGGGCGGACATGGTTAACCCAGGCAGCGTCGACGTGGACCTCAAACTACCTCACAAGAAAAAGCCAACACCGGACGTGGGCTACCCCGGCGGGTTCTGGTTCGACCCGATGATGTGGGGCAGGGGATCGCCGGAGCCGGTCATGGTGCTGCGGACTAAGGAGATCAAGAACGGGCGGCTGGCGATGCTGGCGTTTGTCGGACTGTGGTTTCAGGCTATTTATACAGGGCAGGGTCCGCTGGAGAATCTCGCCGCCCACGTTGCCGATCCCGGCCACTGCAACATCTTCTCGGCATTCAGCTCCGGTGGAATTTGA

Protein sequence

MALSISSTALSTLPIRESSHSHHKALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLPPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIHNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDLKLPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSGGI
Homology
[Close]
BLAST of Csor.00g049720 vs. ExPASy Swiss-Prot
Match: Q8LCQ4 (Photosystem I chlorophyll a/b-binding protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA6 PE=1 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 1.7e-108
Identity = 187/273 (68.50%), Postives = 210/273 (76.92%), Query Frame = 0 

Query: 1   MALSISSTALSTLPIRES-------SHSHHKALNFPGKFPKYNLRRGSTHLNAAKSGVSS 60
           MA +I+S   STL +  S          H  + +  G      L R    +  A   VSS
Sbjct: 1   MAFAIASALTSTLTLSTSRVQNPTQRRPHVASTSSTGG----RLMRERLVVVRAGKEVSS 60

Query: 61  VCEPLPPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAML 120
           VCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDP+ LKWFAQAEL+H+RWAML
Sbjct: 61  VCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAML 120

Query: 121 AVAGILLPEWFESLGLIHNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPG 180
           AV GI++PE  E LG I NFSWYDAG+REYFAD TTL VAQ+ LMGW EGRRWAD++ PG
Sbjct: 121 AVTGIIIPECLERLGFIENFSWYDAGSREYFADSTTLFVAQMVLMGWAEGRRWADLIKPG 180

Query: 181 SVDVDLKLPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGL 240
           SVD++ K PHK  P PDVGYPGG WFD MMWGRGSPEPVMVLRTKEIKNGRLAMLAF+G 
Sbjct: 181 SVDIEPKYPHKVNPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIKNGRLAMLAFLGF 240

Query: 241 WFQAIYTGQGPLENLAAHVADPGHCNIFSAFSS 267
            FQA YT Q P+ENL AH+ADPGHCN+FSAF+S
Sbjct: 241 CFQATYTSQDPIENLMAHLADPGHCNVFSAFTS 269

[Close]
BLAST of Csor.00g049720 vs. ExPASy Swiss-Prot
Match: P13869 (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 8.3e-87
Identity = 141/206 (68.45%), Postives = 163/206 (79.13%), Query Frame = 0 

Query: 60  PDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGIL 119
           PDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPE LKW AQAEL+H+RWAML  AGI 
Sbjct: 63  PDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIF 122

Query: 120 LPEWFESLGLIHNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDL 179
           +PE+   +G+++  SWY AG +EYF D TTL V +L L+GW EGRRWAD++ PG V+ D 
Sbjct: 123 IPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDP 182

Query: 180 KLPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY 239
             P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEIKNGRLAMLA +G WFQ IY
Sbjct: 183 IFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIY 242

Query: 240 TGQGPLENLAAHVADPGHCNIFSAFS 266
           TG GP++NL AH+ADPGH  IF+AFS
Sbjct: 243 TGTGPIDNLFAHLADPGHATIFAAFS 268

[Close]
BLAST of Csor.00g049720 vs. ExPASy Swiss-Prot
Match: P10708 (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB7 PE=3 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 2.7e-85
Identity = 138/214 (64.49%), Postives = 162/214 (75.70%), Query Frame = 0 

Query: 52  SSVCEPLPPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWA 111
           ++VC    PDRPLWFPGSTPP WLDGSLPGDFGFDPLGL SDPE L+W  QAEL+H RWA
Sbjct: 55  TTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWA 114

Query: 112 MLAVAGILLPEWFESLGLIHNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVN 171
           ML  AGI +PE    +G+++  SWY AG +EYF D TTL + +L L+GW EGRRWAD++ 
Sbjct: 115 MLGAAGIFIPELLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIK 174

Query: 172 PGSVDVDLKLPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFV 231
           PG V+ D   P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEIKNGRLAMLA +
Sbjct: 175 PGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVM 234

Query: 232 GLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFS 266
           G WFQ IYTG GP++NL AH+ADPGH  IF+AFS
Sbjct: 235 GAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFS 268

[Close]
BLAST of Csor.00g049720 vs. ExPASy Swiss-Prot
Match: Q9SYW8 (Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA2 PE=1 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 6.0e-85
Identity = 136/206 (66.02%), Postives = 161/206 (78.16%), Query Frame = 0 

Query: 60  PDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGIL 119
           PDRP+WFPGSTPPEWLDGSLPGDFGFDPLGL SDP+ LKW  QAE++H RWAML  AGI 
Sbjct: 50  PDRPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIF 109

Query: 120 LPEWFESLGLIHNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDL 179
           +PE+   +G+++  SWY AG +EYF D TTL V +L L+GW EGRRWAD++ PGSV+ D 
Sbjct: 110 IPEFLTKIGILNTPSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDP 169

Query: 180 KLPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY 239
             P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEIKNGRLAMLA +G WFQ IY
Sbjct: 170 VFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHIY 229

Query: 240 TGQGPLENLAAHVADPGHCNIFSAFS 266
           TG GP++NL AH+ADPGH  IF+AF+
Sbjct: 230 TGTGPIDNLFAHLADPGHATIFAAFT 255

[Close]
BLAST of Csor.00g049720 vs. ExPASy Swiss-Prot
Match: P27521 (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA4 PE=1 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 6.0e-53
Identity = 103/201 (51.24%), Postives = 128/201 (63.68%), Query Frame = 0 

Query: 65  WFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWF 124
           W PG   P++L GSL GD GFDPLGL  DPE LKWF QAEL++ RWAML VAG+LLPE F
Sbjct: 57  WLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVF 116

Query: 125 ESLGLIHNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDLKLPHK 184
             +G+I+   WYDAG  +YFA  +TL V +  L  +VE RRW D+ NPGSV+ D      
Sbjct: 117 TKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQY 176

Query: 185 KKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGP 244
             P  +VGYPGG  F+P+ +      P    + KE+ NGRLAMLAF+G   Q   TG+GP
Sbjct: 177 SLPKGEVGYPGGI-FNPLNFA-----PTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGP 236

Query: 245 LENLAAHVADPGHCNIFSAFS 266
            ENL  H++DP H  I   F+
Sbjct: 237 FENLLQHLSDPWHNTIVQTFN 251

[Close]
BLAST of Csor.00g049720 vs. NCBI nr
Match: KAG6588096.1 (Photosystem I chlorophyll a/b-binding protein 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 575 bits (1483), Expect = 1.11e-207
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0 

Query: 1   MALSISSTALSTLPIRESSHSHHKALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLPP 60
           MALSISSTALSTLPIRESSHSHHKALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLPP
Sbjct: 1   MALSISSTALSTLPIRESSHSHHKALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLPP 60

Query: 61  DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILL 120
           DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILL
Sbjct: 61  DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILL 120

Query: 121 PEWFESLGLIHNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDLK 180
           PEWFESLGLIHNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDLK
Sbjct: 121 PEWFESLGLIHNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDLK 180

Query: 181 LPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT 240
           LPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT
Sbjct: 181 LPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT 240

Query: 241 GQGPLENLAAHVADPGHCNIFSAFSSGGI 269
           GQGPLENLAAHVADPGHCNIFSAFSSGGI
Sbjct: 241 GQGPLENLAAHVADPGHCNIFSAFSSGGI 269

[Close]
BLAST of Csor.00g049720 vs. NCBI nr
Match: XP_022929243.1 (photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 571 bits (1472), Expect = 5.28e-206
Identity = 267/269 (99.26%), Postives = 268/269 (99.63%), Query Frame = 0 

Query: 1   MALSISSTALSTLPIRESSHSHHKALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLPP 60
           MALSISSTALSTLPIRESSHSHH+ALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLPP
Sbjct: 1   MALSISSTALSTLPIRESSHSHHRALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLPP 60

Query: 61  DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILL 120
           DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILL
Sbjct: 61  DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILL 120

Query: 121 PEWFESLGLIHNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDLK 180
           PEWFESLGLI NFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDLK
Sbjct: 121 PEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDLK 180

Query: 181 LPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT 240
           LPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT
Sbjct: 181 LPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT 240

Query: 241 GQGPLENLAAHVADPGHCNIFSAFSSGGI 269
           GQGPLENLAAHVADPGHCNIFSAFSSGGI
Sbjct: 241 GQGPLENLAAHVADPGHCNIFSAFSSGGI 269

[Close]
BLAST of Csor.00g049720 vs. NCBI nr
Match: KAG7021985.1 (Photosystem I chlorophyll a/b-binding protein 6, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 568 bits (1463), Expect = 1.29e-204
Identity = 268/270 (99.26%), Postives = 268/270 (99.26%), Query Frame = 0 

Query: 1   MALSISSTALSTLPI-RESSHSHHKALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLP 60
           MALSISSTALSTLPI RESSHSHHKALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLP
Sbjct: 1   MALSISSTALSTLPISRESSHSHHKALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLP 60

Query: 61  PDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGIL 120
           PDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGIL
Sbjct: 61  PDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGIL 120

Query: 121 LPEWFESLGLIHNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDL 180
           LPEWFESLGLI NFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDL
Sbjct: 121 LPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDL 180

Query: 181 KLPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY 240
           KLPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY
Sbjct: 181 KLPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY 240

Query: 241 TGQGPLENLAAHVADPGHCNIFSAFSSGGI 269
           TGQGPLENLAAHVADPGHCNIFSAFSSGGI
Sbjct: 241 TGQGPLENLAAHVADPGHCNIFSAFSSGGI 270

[Close]
BLAST of Csor.00g049720 vs. NCBI nr
Match: XP_022929235.1 (photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 566 bits (1460), Expect = 3.70e-204
Identity = 267/270 (98.89%), Postives = 268/270 (99.26%), Query Frame = 0 

Query: 1   MALSISSTALSTLPI-RESSHSHHKALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLP 60
           MALSISSTALSTLPI RESSHSHH+ALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLP
Sbjct: 1   MALSISSTALSTLPISRESSHSHHRALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLP 60

Query: 61  PDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGIL 120
           PDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGIL
Sbjct: 61  PDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGIL 120

Query: 121 LPEWFESLGLIHNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDL 180
           LPEWFESLGLI NFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDL
Sbjct: 121 LPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDL 180

Query: 181 KLPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY 240
           KLPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY
Sbjct: 181 KLPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY 240

Query: 241 TGQGPLENLAAHVADPGHCNIFSAFSSGGI 269
           TGQGPLENLAAHVADPGHCNIFSAFSSGGI
Sbjct: 241 TGQGPLENLAAHVADPGHCNIFSAFSSGGI 270

[Close]
BLAST of Csor.00g049720 vs. NCBI nr
Match: XP_023529387.1 (photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 561 bits (1447), Expect = 3.43e-202
Identity = 261/269 (97.03%), Postives = 265/269 (98.51%), Query Frame = 0 

Query: 1   MALSISSTALSTLPIRESSHSHHKALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLPP 60
           MALSISS ALST+PIRESSH+HH+ALNFPGKFPKYNLRRGSTHL AAKSGVSSVCEPLPP
Sbjct: 1   MALSISSAALSTIPIRESSHTHHRALNFPGKFPKYNLRRGSTHLKAAKSGVSSVCEPLPP 60

Query: 61  DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILL 120
           DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILL
Sbjct: 61  DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILL 120

Query: 121 PEWFESLGLIHNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDLK 180
           PEWFESLGLI NFSWYDAGTREYFADP TLLVAQLGLMGWVEGRRWADMVNPGSVDVDLK
Sbjct: 121 PEWFESLGLIQNFSWYDAGTREYFADPMTLLVAQLGLMGWVEGRRWADMVNPGSVDVDLK 180

Query: 181 LPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT 240
           LPHKK+PTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT
Sbjct: 181 LPHKKRPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT 240

Query: 241 GQGPLENLAAHVADPGHCNIFSAFSSGGI 269
           GQGPLENLAAHVADPGHCNIFSAFSSGGI
Sbjct: 241 GQGPLENLAAHVADPGHCNIFSAFSSGGI 269

[Close]
BLAST of Csor.00g049720 vs. ExPASy TrEMBL
Match: A0A6J1ERI7 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111435884 PE=3 SV=1)

HSP 1 Score: 571 bits (1472), Expect = 2.55e-206
Identity = 267/269 (99.26%), Postives = 268/269 (99.63%), Query Frame = 0 

Query: 1   MALSISSTALSTLPIRESSHSHHKALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLPP 60
           MALSISSTALSTLPIRESSHSHH+ALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLPP
Sbjct: 1   MALSISSTALSTLPIRESSHSHHRALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLPP 60

Query: 61  DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILL 120
           DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILL
Sbjct: 61  DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILL 120

Query: 121 PEWFESLGLIHNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDLK 180
           PEWFESLGLI NFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDLK
Sbjct: 121 PEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDLK 180

Query: 181 LPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT 240
           LPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT
Sbjct: 181 LPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT 240

Query: 241 GQGPLENLAAHVADPGHCNIFSAFSSGGI 269
           GQGPLENLAAHVADPGHCNIFSAFSSGGI
Sbjct: 241 GQGPLENLAAHVADPGHCNIFSAFSSGGI 269

[Close]
BLAST of Csor.00g049720 vs. ExPASy TrEMBL
Match: A0A6J1ETS8 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111435884 PE=3 SV=1)

HSP 1 Score: 566 bits (1460), Expect = 1.79e-204
Identity = 267/270 (98.89%), Postives = 268/270 (99.26%), Query Frame = 0 

Query: 1   MALSISSTALSTLPI-RESSHSHHKALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLP 60
           MALSISSTALSTLPI RESSHSHH+ALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLP
Sbjct: 1   MALSISSTALSTLPISRESSHSHHRALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLP 60

Query: 61  PDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGIL 120
           PDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGIL
Sbjct: 61  PDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGIL 120

Query: 121 LPEWFESLGLIHNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDL 180
           LPEWFESLGLI NFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDL
Sbjct: 121 LPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDL 180

Query: 181 KLPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY 240
           KLPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY
Sbjct: 181 KLPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY 240

Query: 241 TGQGPLENLAAHVADPGHCNIFSAFSSGGI 269
           TGQGPLENLAAHVADPGHCNIFSAFSSGGI
Sbjct: 241 TGQGPLENLAAHVADPGHCNIFSAFSSGGI 270

[Close]
BLAST of Csor.00g049720 vs. ExPASy TrEMBL
Match: A0A6J1HWP6 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467340 PE=3 SV=1)

HSP 1 Score: 559 bits (1440), Expect = 3.38e-201
Identity = 263/269 (97.77%), Postives = 266/269 (98.88%), Query Frame = 0 

Query: 1   MALSISSTALSTLPIRESSHSHHKALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLPP 60
           MALSISSTALS+LPIRESSHSH +ALNFPGKFPKYNLRRGS+HLNAAKSGVSSVCEPLPP
Sbjct: 17  MALSISSTALSSLPIRESSHSH-RALNFPGKFPKYNLRRGSSHLNAAKSGVSSVCEPLPP 76

Query: 61  DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILL 120
           DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILL
Sbjct: 77  DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILL 136

Query: 121 PEWFESLGLIHNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDLK 180
           PEWFESLGLI NFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPG VDVDLK
Sbjct: 137 PEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGCVDVDLK 196

Query: 181 LPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT 240
           LPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT
Sbjct: 197 LPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT 256

Query: 241 GQGPLENLAAHVADPGHCNIFSAFSSGGI 269
           GQGPLENLAAHVADPGHCNIFSAFSSGGI
Sbjct: 257 GQGPLENLAAHVADPGHCNIFSAFSSGGI 284

[Close]
BLAST of Csor.00g049720 vs. ExPASy TrEMBL
Match: A0A6J1HS79 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467340 PE=3 SV=1)

HSP 1 Score: 554 bits (1428), Expect = 2.37e-199
Identity = 263/270 (97.41%), Postives = 266/270 (98.52%), Query Frame = 0 

Query: 1   MALSISSTALSTLPI-RESSHSHHKALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLP 60
           MALSISSTALS+LPI RESSHSH +ALNFPGKFPKYNLRRGS+HLNAAKSGVSSVCEPLP
Sbjct: 17  MALSISSTALSSLPISRESSHSH-RALNFPGKFPKYNLRRGSSHLNAAKSGVSSVCEPLP 76

Query: 61  PDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGIL 120
           PDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGIL
Sbjct: 77  PDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGIL 136

Query: 121 LPEWFESLGLIHNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDL 180
           LPEWFESLGLI NFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPG VDVDL
Sbjct: 137 LPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGCVDVDL 196

Query: 181 KLPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY 240
           KLPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY
Sbjct: 197 KLPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY 256

Query: 241 TGQGPLENLAAHVADPGHCNIFSAFSSGGI 269
           TGQGPLENLAAHVADPGHCNIFSAFSSGGI
Sbjct: 257 TGQGPLENLAAHVADPGHCNIFSAFSSGGI 285

[Close]
BLAST of Csor.00g049720 vs. ExPASy TrEMBL
Match: A0A6J1D327 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111016538 PE=3 SV=1)

HSP 1 Score: 513 bits (1320), Expect = 3.07e-183
Identity = 247/269 (91.82%), Postives = 253/269 (94.05%), Query Frame = 0 

Query: 1   MALSISSTALS--TLPIRESSHSHHKALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPL 60
           MALSI+STALS  TLPIRES H+ H    FPGKF K+ LRR  +HLNAAKSGVSSVCEPL
Sbjct: 1   MALSIASTALSVSTLPIRES-HTRH----FPGKFTKH-LRRDYSHLNAAKSGVSSVCEPL 60

Query: 61  PPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGI 120
           PPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGI
Sbjct: 61  PPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGI 120

Query: 121 LLPEWFESLGLIHNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVD 180
           LLPEWFESLGLI NFSWYDAGTREYFADPTTLLVAQLGLMGW EGRRWADMVNPGSVDVD
Sbjct: 121 LLPEWFESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVD 180

Query: 181 LKLPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAI 240
           LKLPHKKKP PDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAI
Sbjct: 181 LKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAI 240

Query: 241 YTGQGPLENLAAHVADPGHCNIFSAFSSG 267
           YTGQGPLENLAAH+ADPGHCNIFSAF SG
Sbjct: 241 YTGQGPLENLAAHLADPGHCNIFSAFRSG 263

[Close]
BLAST of Csor.00g049720 vs. TAIR 10
Match: AT1G19150.1 (photosystem I light harvesting complex gene 6 )

HSP 1 Score: 393.7 bits (1010), Expect = 1.2e-109
Identity = 187/273 (68.50%), Postives = 210/273 (76.92%), Query Frame = 0 

Query: 1   MALSISSTALSTLPIRES-------SHSHHKALNFPGKFPKYNLRRGSTHLNAAKSGVSS 60
           MA +I+S   STL +  S          H  + +  G      L R    +  A   VSS
Sbjct: 1   MAFAIASALTSTLTLSTSRVQNPTQRRPHVASTSSTGG----RLMRERLVVVRAGKEVSS 60

Query: 61  VCEPLPPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAML 120
           VCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDP+ LKWFAQAEL+H+RWAML
Sbjct: 61  VCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAML 120

Query: 121 AVAGILLPEWFESLGLIHNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPG 180
           AV GI++PE  E LG I NFSWYDAG+REYFAD TTL VAQ+ LMGW EGRRWAD++ PG
Sbjct: 121 AVTGIIIPECLERLGFIENFSWYDAGSREYFADSTTLFVAQMVLMGWAEGRRWADLIKPG 180

Query: 181 SVDVDLKLPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGL 240
           SVD++ K PHK  P PDVGYPGG WFD MMWGRGSPEPVMVLRTKEIKNGRLAMLAF+G 
Sbjct: 181 SVDIEPKYPHKVNPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIKNGRLAMLAFLGF 240

Query: 241 WFQAIYTGQGPLENLAAHVADPGHCNIFSAFSS 267
            FQA YT Q P+ENL AH+ADPGHCN+FSAF+S
Sbjct: 241 CFQATYTSQDPIENLMAHLADPGHCNVFSAFTS 269

[Close]
BLAST of Csor.00g049720 vs. TAIR 10
Match: AT3G61470.1 (photosystem I light harvesting complex gene 2 )

HSP 1 Score: 315.5 bits (807), Expect = 4.2e-86
Identity = 136/206 (66.02%), Postives = 161/206 (78.16%), Query Frame = 0 

Query: 60  PDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGIL 119
           PDRP+WFPGSTPPEWLDGSLPGDFGFDPLGL SDP+ LKW  QAE++H RWAML  AGI 
Sbjct: 50  PDRPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIF 109

Query: 120 LPEWFESLGLIHNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDL 179
           +PE+   +G+++  SWY AG +EYF D TTL V +L L+GW EGRRWAD++ PGSV+ D 
Sbjct: 110 IPEFLTKIGILNTPSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDP 169

Query: 180 KLPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY 239
             P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEIKNGRLAMLA +G WFQ IY
Sbjct: 170 VFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHIY 229

Query: 240 TGQGPLENLAAHVADPGHCNIFSAFS 266
           TG GP++NL AH+ADPGH  IF+AF+
Sbjct: 230 TGTGPIDNLFAHLADPGHATIFAAFT 255

[Close]
BLAST of Csor.00g049720 vs. TAIR 10
Match: AT3G47470.1 (light-harvesting chlorophyll-protein complex I subunit A4 )

HSP 1 Score: 209.1 bits (531), Expect = 4.3e-54
Identity = 103/201 (51.24%), Postives = 128/201 (63.68%), Query Frame = 0 

Query: 65  WFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWF 124
           W PG   P++L GSL GD GFDPLGL  DPE LKWF QAEL++ RWAML VAG+LLPE F
Sbjct: 57  WLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVF 116

Query: 125 ESLGLIHNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDLKLPHK 184
             +G+I+   WYDAG  +YFA  +TL V +  L  +VE RRW D+ NPGSV+ D      
Sbjct: 117 TKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQY 176

Query: 185 KKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGP 244
             P  +VGYPGG  F+P+ +      P    + KE+ NGRLAMLAF+G   Q   TG+GP
Sbjct: 177 SLPKGEVGYPGGI-FNPLNFA-----PTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGP 236

Query: 245 LENLAAHVADPGHCNIFSAFS 266
            ENL  H++DP H  I   F+
Sbjct: 237 FENLLQHLSDPWHNTIVQTFN 251

[Close]
BLAST of Csor.00g049720 vs. TAIR 10
Match: AT1G45474.1 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 176.8 bits (447), Expect = 2.3e-44
Identity = 91/221 (41.18%), Postives = 133/221 (60.18%), Query Frame = 0 

Query: 44  LNAAKSGVSSVCEPLPPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQA 103
           +++ K+    +   +  +R  W PG  PP +LDG+L GD+GFDPLGLG DPE LKW+ QA
Sbjct: 28  ISSVKAAGGGINPTVAVERATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDPESLKWYVQA 87

Query: 104 ELMHARWAMLAVAGILLPEWFESLGLIHNFSWYDAGTREY-FADPTTLLVAQLGLMGWVE 163
           EL+H+R+AML VAGIL  +   + G+ +   WY+AG  ++ FA   TL+V Q  LMG+ E
Sbjct: 88  ELVHSRFAMLGVAGILFTDLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVVQFLLMGFAE 147

Query: 164 GRRWADMVNPGSVDVDLKLPHKKKPT---PDVGYPGGFWFDPMMWGRGSPEPVMVLRTKE 223
            +R+ D V+PGS   +       +      + GYPGG   +P+   +   +     + KE
Sbjct: 148 TKRYMDFVSPGSQAKEGSFFFGLEAALEGLEPGYPGGPLLNPLGLAK-DVQNAHDWKLKE 207

Query: 224 IKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNI 261
           IKNGRLAM+A +G + QA  T  GP++NL  H+++P H  I
Sbjct: 208 IKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNPWHKTI 247

[Close]
BLAST of Csor.00g049720 vs. TAIR 10
Match: AT1G45474.2 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 176.8 bits (447), Expect = 2.3e-44
Identity = 91/221 (41.18%), Postives = 133/221 (60.18%), Query Frame = 0 

Query: 44  LNAAKSGVSSVCEPLPPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQA 103
           +++ K+    +   +  +R  W PG  PP +LDG+L GD+GFDPLGLG DPE LKW+ QA
Sbjct: 28  ISSVKAAGGGINPTVAVERATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDPESLKWYVQA 87

Query: 104 ELMHARWAMLAVAGILLPEWFESLGLIHNFSWYDAGTREY-FADPTTLLVAQLGLMGWVE 163
           EL+H+R+AML VAGIL  +   + G+ +   WY+AG  ++ FA   TL+V Q  LMG+ E
Sbjct: 88  ELVHSRFAMLGVAGILFTDLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVVQFLLMGFAE 147

Query: 164 GRRWADMVNPGSVDVDLKLPHKKKPT---PDVGYPGGFWFDPMMWGRGSPEPVMVLRTKE 223
            +R+ D V+PGS   +       +      + GYPGG   +P+   +   +     + KE
Sbjct: 148 TKRYMDFVSPGSQAKEGSFFFGLEAALEGLEPGYPGGPLLNPLGLAK-DVQNAHDWKLKE 207

Query: 224 IKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNI 261
           IKNGRLAM+A +G + QA  T  GP++NL  H+++P H  I
Sbjct: 208 IKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNPWHKTI 247

The following BLAST results are available for this feature:
BLAST of Csor.00g049720 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8LCQ41.7e-10868.50Photosystem I chlorophyll a/b-binding protein 6, chloroplastic OS=Arabidopsis th... [more]
P138698.3e-8768.45Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 S... [more]
P107082.7e-8564.49Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum OX=4081... [more]
Q9SYW86.0e-8566.02Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis th... [more]
P275216.0e-5351.24Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702... [more]
BLAST of Csor.00g049720 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6588096.11.11e-207100.00Photosystem I chlorophyll a/b-binding protein 6, chloroplastic, partial [Cucurbi... [more]
XP_022929243.15.28e-20699.26photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X2 [Cucur... [more]
KAG7021985.11.29e-20499.26Photosystem I chlorophyll a/b-binding protein 6, chloroplastic [Cucurbita argyro... [more]
XP_022929235.13.70e-20498.89photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X1 [Cucur... [more]
XP_023529387.13.43e-20297.03photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X2 [Cucur... [more]
BLAST of Csor.00g049720 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1ERI72.55e-20699.26Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1ETS81.79e-20498.89Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1HWP63.38e-20197.77Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1HS792.37e-19997.41Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1D3273.07e-18391.82Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN... [more]
BLAST of Csor.00g049720 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G19150.11.2e-10968.50photosystem I light harvesting complex gene 6 [more]
AT3G61470.14.2e-8666.02photosystem I light harvesting complex gene 2 [more]
AT3G47470.14.3e-5451.24light-harvesting chlorophyll-protein complex I subunit A4 [more]
AT1G45474.12.3e-4441.18photosystem I light harvesting complex gene 5 [more]
AT1G45474.22.3e-4441.18photosystem I light harvesting complex gene 5 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 71..237
e-value: 7.0E-52
score: 176.2
IPR023329Chlorophyll a/b binding domain superfamilyGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 72..257
e-value: 4.0E-68
score: 231.0
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 1..264
NoneNo IPR availablePANTHERPTHR21649:SF5PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 6, CHLOROPLASTICcoord: 1..264
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 61..264

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g049720.m01Csor.00g049720.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009768 photosynthesis, light harvesting in photosystem I
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0009416 response to light stimulus
biological_process GO:0009765 photosynthesis, light harvesting
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009522 photosystem I
cellular_component GO:0009523 photosystem II
cellular_component GO:0016020 membrane
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0046872 metal ion binding