Csor.00g049350 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g049350
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	protochlorophyllide-dependent translocon component 52, chloroplastic
Location	Csor_Chr11: 3958536 .. 3960866 (-)
RNA-Seq Expression	Csor.00g049350
Synteny	Csor.00g049350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGTGCTGAAATTCTCTTCTGTTCCACTCCACTTCACTGCCAAACTGAAGAAATCCCGATTTCTGAAGCAGTGTTTGCAGGTTAATCTATTGCCCTCGTTGCCTTCTTCATCGATTAGCCGGCATAGTCGAAGATTTAAGCTCCGTGCGAGCGTATCATCCACCATTTCAACGGAGGAATTTGAATTTGCAAGTCCGTTTGAGGTTGAGGCCGAGAATGAACGGCGAGAGGATGAGAGGTTTGATTGGTATGCGCAATGGTACCCGATTATGCCGATTTGTGACCTCGACAAGAGGGTGCCGCATGGGAAAACGGTAATGGGGATTGATGTCGTGGTGTGGTGGGATAAGAATGAGAGTGCGTGGAAGGTGTTTGAGGATTTGTGTCCGCATAGATTGGCTCCGTTGTCTGAAGGAAGGATTGATCAATGGGGGAGATTGCAATGTGTTTATCATGGCTGGTGTTTTAACGGATCTGGTGATTGTAAGTTCATCCCTCAGGCTCCCCCTGACGGCCCTCCGGTAAGGATTCTACCATCTTCCCCTTGTGAACTTATTGCTCTGCTTCAATTAGAGATTTAACTTTATGGTTGCATCGAATTCAACTTCGAAAGAGTTTTGATTACATATTTGAATCTGGATTGTGATTCTGTTTATTCGACAAGCATTAGTTGATTTGACATGATTTAATGAATAAACGAGAATGTCAGTATAACGATTCACAAATTAACTTTGATTGCCATAAACAAAAGAGATTTCTTATGCTGCTTGCTAGTTGCTGGCACTTTGTTTTGGTGTTCATGGTAGAGATAGCACAAGATCAAACAGTTCAAAGTTGAGAAGCCTGTTAAAGTTAGGCATAGCACTAAATTGTTAATTTACCCATTATTAACATATTTCTACCAAACTGAAATCAACATTACTGATCCTTCTCGTCTCGTCGTTTTTTGTTCCATGATAATATAGTTCAGTAGTAATTTGGAGAAAATGTGCTTAAACTGCTTATTAAGAACATCATTTCATTAATGACAAATCAGAAGAATGTAGTTTTTCTCAATGGATCTATTTCGTATAACACAACTTTTCTTGAATGCTGAAAAACTTACTAAATGATTTACCTTAGATTCAGAATTTGATTTTACTTCCTATTTCTGTCGTTAGTGCATATTGTTCCGGTGGTGAACATTGTTCAGAATCCGACATATTGCAGTAGAAAATGAAGTCGTCTTCAGAAGTTAACAAGAGTGTCATATGCTAAGATAGTTAAAAGATTAAGTATTGTGGTTATATTAGTCAAACTTTAAATAACTGGACAAGAGTCGCTAATTTTCTTCCTTCGATTTGCAGGTTCACACGTCCAAAAGGGCATGTGTTGCTGTTTATCCTAGCATTGTGCAGAATGACATTTTATGGTTTTGGCCAAATAGTGATCCCCAGTACAAGGATATTTTGGTGAAGAAAAAACCCCCTTACATTCCTGAATTGGACGATCCGTCATATACTAAGTTAATTAGTAACAGAGATCTTCCATATGGGTATGGAGAGCCTGATTGTCACTTTTTACTCATCTGCATTCTATTTGATCTTGGCCAGTCTAGTTATAGAGGAATTATGAAGGAAGCTATCACGAATGTAGTTGAACTGTGCTCTTTTTCTCATTTTCCTTTTCTTTTTCCACCGAAAGAAAATCGAATCATTGATTTTAAGCTGAGGAAATTCTATTTAACAAAAAGATCATGACCGTATTCTCCACAAACGGTCTAATTCATAGCAAAAGACTGATTACTAGCTCTTCATAGTAGAACCAACGATGGTGAACTGGATAAGTTAACAATAAGATTGTTACTTACTGTTAGGTGGATCTCAATGTAGAAGACTGTGTTCTTTCCTTTATCACTTAGCTTAGGAGTCATACGAGATGAAAGTTTCATGCACGGTTTTGAATGAGAGAAAGAAGTGAGGAATCCCCCTTTCGACTCTGACTCTCCCACTCAAGTAGTTGCTTTTCTTTTTGTTACTTCTAAAGTAGCTGTTTCAGTTTCAACCACTCGAATTTTCGATATTCCTGTTTATTTCTCACCGAACGAATGGCATGATTACTAGCTAATTCATAGTGGAACCAAAGAGGGTGAACTGGATAGGTTAACAATAACATTGATAAAATGAAAGGAGTTCGAGTGGGTAGATAAGACCTCTCTGTTACTCAACAACTCTCTTTCTCTTTACACTTTCAGGTATGAGGTTTTGACTGAGAATCTTATGGACCCAGCTCATGTCCCCTATGCCCATTATGGGATAATGGGAAGGCAACAGCCCAATAACAGATGA

mRNA sequence

ATGGACGTGCTGAAATTCTCTTCTGTTCCACTCCACTTCACTGCCAAACTGAAGAAATCCCGATTTCTGAAGCAGTGTTTGCAGGTTAATCTATTGCCCTCGTTGCCTTCTTCATCGATTAGCCGGCATAGTCGAAGATTTAAGCTCCGTGCGAGCGTATCATCCACCATTTCAACGGAGGAATTTGAATTTGCAAGTCCGTTTGAGGTTGAGGCCGAGAATGAACGGCGAGAGGATGAGAGGTTTGATTGGTATGCGCAATGGTACCCGATTATGCCGATTTGTGACCTCGACAAGAGGGTGCCGCATGGGAAAACGGTAATGGGGATTGATGTCGTGGTGTGGTGGGATAAGAATGAGAGTGCGTGGAAGGTGTTTGAGGATTTGTGTCCGCATAGATTGGCTCCGTTGTCTGAAGGAAGGATTGATCAATGGGGGAGATTGCAATGTGTTTATCATGGCTGGTGTTTTAACGGATCTGGTGATTGTAAGTTCATCCCTCAGGCTCCCCCTGACGGCCCTCCGGTTCACACGTCCAAAAGGGCATGTGTTGCTGTTTATCCTAGCATTGTGCAGAATGACATTTTATGGTTTTGGCCAAATAGTGATCCCCAGTACAAGGATATTTTGGTGAAGAAAAAACCCCCTTACATTCCTGAATTGGACGATCCGTCATATACTAAGTTAATTAGTAACAGAGATCTTCCATATGGGTATGAGGTTTTGACTGAGAATCTTATGGACCCAGCTCATGTCCCCTATGCCCATTATGGGATAATGGGAAGGCAACAGCCCAATAACAGATGA

Coding sequence (CDS)

ATGGACGTGCTGAAATTCTCTTCTGTTCCACTCCACTTCACTGCCAAACTGAAGAAATCCCGATTTCTGAAGCAGTGTTTGCAGGTTAATCTATTGCCCTCGTTGCCTTCTTCATCGATTAGCCGGCATAGTCGAAGATTTAAGCTCCGTGCGAGCGTATCATCCACCATTTCAACGGAGGAATTTGAATTTGCAAGTCCGTTTGAGGTTGAGGCCGAGAATGAACGGCGAGAGGATGAGAGGTTTGATTGGTATGCGCAATGGTACCCGATTATGCCGATTTGTGACCTCGACAAGAGGGTGCCGCATGGGAAAACGGTAATGGGGATTGATGTCGTGGTGTGGTGGGATAAGAATGAGAGTGCGTGGAAGGTGTTTGAGGATTTGTGTCCGCATAGATTGGCTCCGTTGTCTGAAGGAAGGATTGATCAATGGGGGAGATTGCAATGTGTTTATCATGGCTGGTGTTTTAACGGATCTGGTGATTGTAAGTTCATCCCTCAGGCTCCCCCTGACGGCCCTCCGGTTCACACGTCCAAAAGGGCATGTGTTGCTGTTTATCCTAGCATTGTGCAGAATGACATTTTATGGTTTTGGCCAAATAGTGATCCCCAGTACAAGGATATTTTGGTGAAGAAAAAACCCCCTTACATTCCTGAATTGGACGATCCGTCATATACTAAGTTAATTAGTAACAGAGATCTTCCATATGGGTATGAGGTTTTGACTGAGAATCTTATGGACCCAGCTCATGTCCCCTATGCCCATTATGGGATAATGGGAAGGCAACAGCCCAATAACAGATGA

Protein sequence

MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTEEFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGYEVLTENLMDPAHVPYAHYGIMGRQQPNNR

Homology

[Close]

BLAST of Csor.00g049350 vs. ExPASy Swiss-Prot
Match: Q8W496 (Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTC52 PE=2 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 1.6e-101
Identity = 166/237 (70.04%), Postives = 191/237 (80.59%), Query Frame = 0


Query: 32  LPSLPSSSISRHSRRFKLRASVSSTISTEEFEFASPFEVEAENERREDERFDWYAQWYPI 91
           LP  P+S I+R S RF    S S   S+      SP E EA  E   D +FDWYA WYP+
Sbjct: 31  LPISPNSLITRKSSRFTTAVS-SPPSSSAATSTNSPPEPEALFEPGSD-KFDWYANWYPV 90

Query: 92  MPICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCV 151
           MPICDLDK+VPHGK VMGID+VVWWD+NE  WKV +D CPHRLAPLS+GRIDQWGRLQCV
Sbjct: 91  MPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLAPLSDGRIDQWGRLQCV 150

Query: 152 YHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVYPSIVQNDILWFWPNSDPQYKDILV 211
           YHGWCFNGSGDCK IPQAPPDGPPVHT K+ACVAVYPS VQ++I+WFWPNSDP+YK+I+ 
Sbjct: 151 YHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVAVYPSTVQHEIIWFWPNSDPKYKNIIE 210

Query: 212 KKKPPYIPELDDPSYTKLISNRDLPYGYEVLTENLMDPAHVPYAHYGIMGRQQPNNR 269
             KPPYIPEL+DPS+TKL+ NRD+PYGY+VL ENLMDPAHVPYAHYG+M   +P  +
Sbjct: 211 TNKPPYIPELEDPSFTKLMGNRDIPYGYDVLVENLMDPAHVPYAHYGLMRFPKPKGK 265

[Close]

BLAST of Csor.00g049350 vs. ExPASy Swiss-Prot
Match: Q9FYC2 (Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAO PE=1 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.0e-48
Identity = 108/271 (39.85%), Postives = 151/271 (55.72%), Query Frame = 0


Query: 1   MDVLKFSSVPLHFT-AKLKKSRFL----KQCLQVNLLPSLPSSSISRHSRRFKLRASVSS 60
           M V+  SS     T ++ KK  FL    K  L+V++ PS   S +  +  R     SV +
Sbjct: 1   MSVVLLSSTSATITKSQSKKIPFLSPTTKFPLKVSISPS--RSKLFHNPLRVAAPPSVPT 60

Query: 61  TISTEEFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVW 120
           + STEE      +  + E E  E   F W   WYP+  + DLD  VP    ++G D+V+W
Sbjct: 61  SDSTEEKRIEEEYGGDKEEEGSE---FKWRDHWYPVSLVEDLDPNVPTPFQLLGRDLVLW 120

Query: 121 WDKNESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPP 180
           +D+N+  W  F+DLCPHRLAPLSEGR+D+ G LQC YHGW F G G C  IPQA   GP 
Sbjct: 121 FDRNDQKWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGPE 180

Query: 181 VHT--SKRACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIP-ELDDPSYTKLISN 240
                S RAC   +P++V   +L+ WP  D    D     +PP +P + D P ++ +   
Sbjct: 181 ARAVKSPRACAIKFPTMVSQGLLFVWP--DENGWDRANSIEPPRLPDDFDKPEFSTVTIQ 240

Query: 241 RDLPYGYEVLTENLMDPAHVPYAHYGIMGRQ 264
           RDL YGY+ L EN+ DP+H+ +AH+ + GR+
Sbjct: 241 RDLFYGYDTLMENVSDPSHIDFAHHKVTGRR 264

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BLAST of Csor.00g049350 vs. ExPASy Swiss-Prot
Match: Q0DV66 (Pheophorbide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PAO PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.7e-47
Identity = 95/238 (39.92%), Postives = 134/238 (56.30%), Query Frame = 0


Query: 32  LPSLPSSSISRHSRRFKLRASVSSTISTEEFEFASPFEVEAENE---RREDERFDWYAQW 91
           +PSLP+ S S   R  + RA     ++          +   E E      DE+F W   W
Sbjct: 23  VPSLPALSASGRLRLRRARADTRLRVAAPPSVPGEADQAPGETEPSTSSADEKFVWRDHW 82

Query: 92  YPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVFEDLCPHRLAPLSEGRIDQWGRL 151
           YP+  + DLD  VP    ++  D+V+W D     W   +D CPHRLAPLSEGRID+ G L
Sbjct: 83  YPVSLVEDLDPSVPTPFQLLNRDLVIWKDPKSGEWVALDDRCPHRLAPLSEGRIDETGCL 142

Query: 152 QCVYHGWCFNGSGDCKFIPQAPPDGPPVHT--SKRACVAVYPSIVQNDILWFWPNSDPQY 211
           QC YHGW F+GSG C  IPQA P+GP      S +AC   +P++V   +L+ WP+ +   
Sbjct: 143 QCSYHGWSFDGSGACTRIPQAAPEGPEAKAVRSPKACAIKFPTLVSQGLLFVWPDENGWE 202

Query: 212 KDILVKKKPPYIP-ELDDPSYTKLISNRDLPYGYEVLTENLMDPAHVPYAHYGIMGRQ 264
           K      KPP +P E +DP+++ +   RDL YGY+ L EN+ DP+H+ +AH+ + GR+
Sbjct: 203 K--ATATKPPMLPKEFEDPAFSTVTIQRDLYYGYDTLMENVSDPSHIEFAHHKVTGRR 258

[Close]

BLAST of Csor.00g049350 vs. ExPASy Swiss-Prot
Match: Q9SK50 (Protein TIC 55, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC55 PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 7.6e-32
Identity = 75/212 (35.38%), Postives = 111/212 (52.36%), Query Frame = 0


Query: 46  RFKLRASVSSTISTEEFEFASPFEVEAENERR-EDERFDWYAQWYPIMPICDLDKRVPHG 105
           R   R++V+ T  +++ E      +  E E+R E   +DW  +WYP+    ++ +  P G
Sbjct: 45  RLLRRSAVAGTAVSDQTEGGGDVLLNPEEEKRVEVADYDWTEEWYPLYLTKNVPEDAPLG 104

Query: 106 KTVMGIDVVVWWDKNESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCK 165
            TV    +V++ D  E   + +ED CPHRLA LSEG++   GRL+C+YHGW F G G C 
Sbjct: 105 LTVYDRQIVLYKD-GEGTLRCYEDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCV 164

Query: 166 FIPQAPPDGPPVHTSKRACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDP 225
            IPQ P         K ACV  Y       ++W W ++    K     +K P+      P
Sbjct: 165 KIPQLPAS---AKIPKAACVKTYEVKDSQGVVWVWMST----KTPPNPEKLPWFENFARP 224

Query: 226 SYTKLISNRDLPYGYEVLTENLMDPAHVPYAH 257
            +  + +  +LPY + +L ENLMDPAHVP +H
Sbjct: 225 GFFDISTTHELPYDHSILLENLMDPAHVPISH 247

[Close]

BLAST of Csor.00g049350 vs. ExPASy Swiss-Prot
Match: O49931 (Protein TIC 55, chloroplastic OS=Pisum sativum OX=3888 GN=TIC55 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.9e-31
Identity = 74/194 (38.14%), Postives = 100/194 (51.55%), Query Frame = 0


Query: 67  PFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPH----GKTVMGIDVVVWWDKNESA 126
           P   +     RE   +DW  +WYP+     L K VPH    G  V   ++V++ D N+  
Sbjct: 82  PSSEQERKGEREVADYDWTEEWYPLY----LTKNVPHDAPLGLKVYDKNIVLFRDGNDQ- 141

Query: 127 WKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRA 186
           ++ +ED CPHRLA LSEG++   GRL+C+YHGW F G G C  IPQ P D       K A
Sbjct: 142 FQCYEDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAD---AKIPKSA 201

Query: 187 CVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGYEVL 246
           CV  Y       +LW W +     K      K P+      P +  + +  +LPY + +L
Sbjct: 202 CVKTYEVRDSQGVLWVWMSR----KTPPNVSKIPWFENFARPGFQDISTTHELPYDHSIL 261

Query: 247 TENLMDPAHVPYAH 257
            ENLMDPAHVP +H
Sbjct: 262 LENLMDPAHVPISH 262

[Close]

BLAST of Csor.00g049350 vs. NCBI nr
Match: KAG6588133.1 (Protochlorophyllide-dependent translocon component 52, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 571 bits (1471), Expect = 6.93e-206
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTE 60
           MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTE
Sbjct: 1   MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTE 60

Query: 61  EFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120
           EFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE
Sbjct: 61  EFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120

Query: 121 SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180
           SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK
Sbjct: 121 SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180

Query: 181 RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGYE 240
           RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGYE
Sbjct: 181 RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGYE 240

Query: 241 VLTENLMDPAHVPYAHYGIMGRQQPNNR 268
           VLTENLMDPAHVPYAHYGIMGRQQPNNR
Sbjct: 241 VLTENLMDPAHVPYAHYGIMGRQQPNNR 268

[Close]

BLAST of Csor.00g049350 vs. NCBI nr
Match: XP_022933573.1 (protochlorophyllide-dependent translocon component 52, chloroplastic [Cucurbita moschata])

HSP 1 Score: 571 bits (1471), Expect = 1.69e-201
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTE 60
           MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTE
Sbjct: 1   MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTE 60

Query: 61  EFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120
           EFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE
Sbjct: 61  EFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120

Query: 121 SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180
           SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK
Sbjct: 121 SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180

Query: 181 RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGYE 240
           RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGYE
Sbjct: 181 RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGYE 240

Query: 241 VLTENLMDPAHVPYAHYGIMGRQQPNNR 268
           VLTENLMDPAHVPYAHYGIMGRQQPNNR
Sbjct: 241 VLTENLMDPAHVPYAHYGIMGRQQPNNR 268

[Close]

BLAST of Csor.00g049350 vs. NCBI nr
Match: KAG7022028.1 (Protochlorophyllide-dependent translocon component 52, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 553 bits (1424), Expect = 3.85e-198
Identity = 268/304 (88.16%), Postives = 268/304 (88.16%), Query Frame = 0


Query: 1   MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTE 60
           MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTE
Sbjct: 1   MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTE 60

Query: 61  EFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120
           EFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE
Sbjct: 61  EFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120

Query: 121 SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180
           SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK
Sbjct: 121 SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180

Query: 181 RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGY- 240
           RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGY 
Sbjct: 181 RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGYG 240

Query: 241 -----------------------------------EVLTENLMDPAHVPYAHYGIMGRQQ 268
                                              EVLTENLMDPAHVPYAHYGIMGRQQ
Sbjct: 241 EPDCHFLLICILFDLGQSSYRGIMKEAITNVVELYEVLTENLMDPAHVPYAHYGIMGRQQ 300

[Close]

BLAST of Csor.00g049350 vs. NCBI nr
Match: XP_023531366.1 (protochlorophyllide-dependent translocon component 52, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 560 bits (1443), Expect = 3.05e-197
Identity = 263/268 (98.13%), Postives = 265/268 (98.88%), Query Frame = 0


Query: 1   MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTE 60
           MDVLKFSSVPLHFTAKL KSRFLKQCLQVNLLPSLPSSSISR+SRRFKLRASVSSTISTE
Sbjct: 1   MDVLKFSSVPLHFTAKLNKSRFLKQCLQVNLLPSLPSSSISRYSRRFKLRASVSSTISTE 60

Query: 61  EFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120
           EFEFASPFEVEAE+ERR DERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE
Sbjct: 61  EFEFASPFEVEAESERRVDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120

Query: 121 SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180
           SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK
Sbjct: 121 SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180

Query: 181 RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGYE 240
           RACVAVYPSIVQNDILWFWPNSDPQYKDILVKK PPYIPELDDPSYTKLISNRDLPYGYE
Sbjct: 181 RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKNPPYIPELDDPSYTKLISNRDLPYGYE 240

Query: 241 VLTENLMDPAHVPYAHYGIMGRQQPNNR 268
           VLTENLMDPAHVPYAHYGIMGRQQPNNR
Sbjct: 241 VLTENLMDPAHVPYAHYGIMGRQQPNNR 268

[Close]

BLAST of Csor.00g049350 vs. NCBI nr
Match: XP_022967161.1 (protochlorophyllide-dependent translocon component 52, chloroplastic [Cucurbita maxima])

HSP 1 Score: 552 bits (1423), Expect = 3.34e-194
Identity = 258/268 (96.27%), Postives = 261/268 (97.39%), Query Frame = 0


Query: 1   MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTE 60
           MDVLKFSSVPLHFTAKL KSRFLKQCLQVNLLPSLPSS ISRHSRRF LRASVSSTISTE
Sbjct: 1   MDVLKFSSVPLHFTAKLNKSRFLKQCLQVNLLPSLPSSLISRHSRRFNLRASVSSTISTE 60

Query: 61  EFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120
           EFE+ASPFE EAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE
Sbjct: 61  EFEYASPFEDEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120

Query: 121 SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180
           SAWKVFED CPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK
Sbjct: 121 SAWKVFEDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180

Query: 181 RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGYE 240
           RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKL SNRDLPYGYE
Sbjct: 181 RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLTSNRDLPYGYE 240

Query: 241 VLTENLMDPAHVPYAHYGIMGRQQPNNR 268
           +LTENLMDPAHVPYAHYGIMG +QPNNR
Sbjct: 241 ILTENLMDPAHVPYAHYGIMGMRQPNNR 268

[Close]

BLAST of Csor.00g049350 vs. ExPASy TrEMBL
Match: A0A6J1F557 (protochlorophyllide-dependent translocon component 52, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111440957 PE=4 SV=1)

HSP 1 Score: 571 bits (1471), Expect = 8.19e-202
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTE 60
           MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTE
Sbjct: 1   MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTE 60

Query: 61  EFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120
           EFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE
Sbjct: 61  EFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120

Query: 121 SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180
           SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK
Sbjct: 121 SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180

Query: 181 RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGYE 240
           RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGYE
Sbjct: 181 RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGYE 240

Query: 241 VLTENLMDPAHVPYAHYGIMGRQQPNNR 268
           VLTENLMDPAHVPYAHYGIMGRQQPNNR
Sbjct: 241 VLTENLMDPAHVPYAHYGIMGRQQPNNR 268

[Close]

BLAST of Csor.00g049350 vs. ExPASy TrEMBL
Match: A0A6J1HR92 (protochlorophyllide-dependent translocon component 52, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466721 PE=4 SV=1)

HSP 1 Score: 552 bits (1423), Expect = 1.62e-194
Identity = 258/268 (96.27%), Postives = 261/268 (97.39%), Query Frame = 0


Query: 1   MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTE 60
           MDVLKFSSVPLHFTAKL KSRFLKQCLQVNLLPSLPSS ISRHSRRF LRASVSSTISTE
Sbjct: 1   MDVLKFSSVPLHFTAKLNKSRFLKQCLQVNLLPSLPSSLISRHSRRFNLRASVSSTISTE 60

Query: 61  EFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120
           EFE+ASPFE EAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE
Sbjct: 61  EFEYASPFEDEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120

Query: 121 SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180
           SAWKVFED CPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK
Sbjct: 121 SAWKVFEDSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180

Query: 181 RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGYE 240
           RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKL SNRDLPYGYE
Sbjct: 181 RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLTSNRDLPYGYE 240

Query: 241 VLTENLMDPAHVPYAHYGIMGRQQPNNR 268
           +LTENLMDPAHVPYAHYGIMG +QPNNR
Sbjct: 241 ILTENLMDPAHVPYAHYGIMGMRQPNNR 268

[Close]

BLAST of Csor.00g049350 vs. ExPASy TrEMBL
Match: A0A1S3BQM5 (protochlorophyllide-dependent translocon component 52, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492435 PE=4 SV=1)

HSP 1 Score: 487 bits (1253), Expect = 9.52e-169
Identity = 228/268 (85.07%), Postives = 243/268 (90.67%), Query Frame = 0


Query: 1   MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTE 60
           MD+LK SS PLHFT K  K +F  QCL++ L PS  SSSI+R + RFKL A  SS IST+
Sbjct: 1   MDLLKLSSSPLHFTPKFDKPQFPNQCLRIPLFPSSSSSSINRRNPRFKLCAITSSAISTQ 60

Query: 61  EFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120
           E   A+PF+VEAE+E  E ERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE
Sbjct: 61  ES--ANPFQVEAESESGE-ERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120

Query: 121 SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180
           SAWKVF+DLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK
Sbjct: 121 SAWKVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180

Query: 181 RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGYE 240
           RACVAVYPSIVQND+LWFWPNSDPQYKDI+VKKKPPYIPELDDPS+TKLISNRDLPYGYE
Sbjct: 181 RACVAVYPSIVQNDVLWFWPNSDPQYKDIMVKKKPPYIPELDDPSFTKLISNRDLPYGYE 240

Query: 241 VLTENLMDPAHVPYAHYGIMGRQQPNNR 268
           +LTENLMDPAHVPYAHYGIMGRQQP NR
Sbjct: 241 ILTENLMDPAHVPYAHYGIMGRQQPKNR 265

[Close]

BLAST of Csor.00g049350 vs. ExPASy TrEMBL
Match: A0A5D3CEJ7 (Protochlorophyllide-dependent translocon component 52 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00840 PE=4 SV=1)

HSP 1 Score: 475 bits (1222), Expect = 5.88e-168
Identity = 228/289 (78.89%), Postives = 244/289 (84.43%), Query Frame = 0


Query: 1   MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTE 60
           MD+LK SS PLHFT+K  K +F  QCL++ L PS  SSSI+R + RFKL A  SS IST+
Sbjct: 1   MDLLKLSSSPLHFTSKFDKPQFPNQCLRIPLFPSSSSSSINRRNPRFKLCAITSSAISTQ 60

Query: 61  EFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120
           E   A+PF+VEAE+E  E ERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE
Sbjct: 61  ES--ANPFQVEAESEPGE-ERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120

Query: 121 SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180
           SAWKVF+DLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK
Sbjct: 121 SAWKVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180

Query: 181 RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYG-- 240
           RACVAVYPSIVQND+LWFWPNSDPQYKDI+VKKKPPYIPELDDPS+TKLISNRDLPYG  
Sbjct: 181 RACVAVYPSIVQNDVLWFWPNSDPQYKDIMVKKKPPYIPELDDPSFTKLISNRDLPYGRS 240

Query: 241 -------------------YEVLTENLMDPAHVPYAHYGIMGRQQPNNR 268
                              YE+LTENLMDPAHVPYAHYGIMGRQQP NR
Sbjct: 241 SARDDISVYSTTQSFCTFRYEILTENLMDPAHVPYAHYGIMGRQQPKNR 286

[Close]

BLAST of Csor.00g049350 vs. ExPASy TrEMBL
Match: A0A0A0LZA2 (Rieske domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G600140 PE=4 SV=1)

HSP 1 Score: 473 bits (1217), Expect = 1.53e-167
Identity = 224/268 (83.58%), Postives = 240/268 (89.55%), Query Frame = 0


Query: 1   MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTE 60
           MDVLK SS PLHFT+K  K +F  QCLQ+ L PS  SSSI+R +  F L A  SSTIST+
Sbjct: 1   MDVLKLSSSPLHFTSKFNKPQFPNQCLQIPLFPSSSSSSINRRNPIFNLCAITSSTISTQ 60

Query: 61  EFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120
           E   A+PF+V+AE+E  E ERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE
Sbjct: 61  ES--ANPFQVDAESEPGE-ERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120

Query: 121 SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180
           SAWKVF+DLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK
Sbjct: 121 SAWKVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSK 180

Query: 181 RACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGYE 240
           RACVAV+PSIVQND+LWFWPNSDPQYKDI+ KKKPPYIPELDDPS+TKLISNRDLPYGYE
Sbjct: 181 RACVAVFPSIVQNDVLWFWPNSDPQYKDIMEKKKPPYIPELDDPSFTKLISNRDLPYGYE 240

Query: 241 VLTENLMDPAHVPYAHYGIMGRQQPNNR 268
           +LTENLMDPAHVPYAHYGIMGR  P NR
Sbjct: 241 ILTENLMDPAHVPYAHYGIMGRL-PKNR 264

[Close]

BLAST of Csor.00g049350 vs. TAIR 10
Match: AT4G25650.1 (ACD1-like )

HSP 1 Score: 370.5 bits (950), Expect = 1.1e-102
Identity = 166/237 (70.04%), Postives = 191/237 (80.59%), Query Frame = 0


Query: 32  LPSLPSSSISRHSRRFKLRASVSSTISTEEFEFASPFEVEAENERREDERFDWYAQWYPI 91
           LP  P+S I+R S RF    S S   S+      SP E EA  E   D +FDWYA WYP+
Sbjct: 31  LPISPNSLITRKSSRFTTAVS-SPPSSSAATSTNSPPEPEALFEPGSD-KFDWYANWYPV 90

Query: 92  MPICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCV 151
           MPICDLDK+VPHGK VMGID+VVWWD+NE  WKV +D CPHRLAPLS+GRIDQWGRLQCV
Sbjct: 91  MPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLAPLSDGRIDQWGRLQCV 150

Query: 152 YHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVYPSIVQNDILWFWPNSDPQYKDILV 211
           YHGWCFNGSGDCK IPQAPPDGPPVHT K+ACVAVYPS VQ++I+WFWPNSDP+YK+I+ 
Sbjct: 151 YHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVAVYPSTVQHEIIWFWPNSDPKYKNIIE 210

Query: 212 KKKPPYIPELDDPSYTKLISNRDLPYGYEVLTENLMDPAHVPYAHYGIMGRQQPNNR 269
             KPPYIPEL+DPS+TKL+ NRD+PYGY+VL ENLMDPAHVPYAHYG+M   +P  +
Sbjct: 211 TNKPPYIPELEDPSFTKLMGNRDIPYGYDVLVENLMDPAHVPYAHYGLMRFPKPKEK 265

[Close]

BLAST of Csor.00g049350 vs. TAIR 10
Match: AT4G25650.2 (ACD1-like )

HSP 1 Score: 370.5 bits (950), Expect = 1.1e-102
Identity = 166/237 (70.04%), Postives = 191/237 (80.59%), Query Frame = 0


Query: 32  LPSLPSSSISRHSRRFKLRASVSSTISTEEFEFASPFEVEAENERREDERFDWYAQWYPI 91
           LP  P+S I+R S RF    S S   S+      SP E EA  E   D +FDWYA WYP+
Sbjct: 31  LPISPNSLITRKSSRFTTAVS-SPPSSSAATSTNSPPEPEALFEPGSD-KFDWYANWYPV 90

Query: 92  MPICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCV 151
           MPICDLDK+VPHGK VMGID+VVWWD+NE  WKV +D CPHRLAPLS+GRIDQWGRLQCV
Sbjct: 91  MPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLAPLSDGRIDQWGRLQCV 150

Query: 152 YHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVYPSIVQNDILWFWPNSDPQYKDILV 211
           YHGWCFNGSGDCK IPQAPPDGPPVHT K+ACVAVYPS VQ++I+WFWPNSDP+YK+I+ 
Sbjct: 151 YHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVAVYPSTVQHEIIWFWPNSDPKYKNIIE 210

Query: 212 KKKPPYIPELDDPSYTKLISNRDLPYGYEVLTENLMDPAHVPYAHYGIMGRQQPNNR 269
             KPPYIPEL+DPS+TKL+ NRD+PYGY+VL ENLMDPAHVPYAHYG+M   +P  +
Sbjct: 211 TNKPPYIPELEDPSFTKLMGNRDIPYGYDVLVENLMDPAHVPYAHYGLMRFPKPKGK 265

[Close]

BLAST of Csor.00g049350 vs. TAIR 10
Match: AT3G44880.1 (Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain )

HSP 1 Score: 194.1 bits (492), Expect = 1.4e-49
Identity = 108/271 (39.85%), Postives = 151/271 (55.72%), Query Frame = 0


Query: 1   MDVLKFSSVPLHFT-AKLKKSRFL----KQCLQVNLLPSLPSSSISRHSRRFKLRASVSS 60
           M V+  SS     T ++ KK  FL    K  L+V++ PS   S +  +  R     SV +
Sbjct: 1   MSVVLLSSTSATITKSQSKKIPFLSPTTKFPLKVSISPS--RSKLFHNPLRVAAPPSVPT 60

Query: 61  TISTEEFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVW 120
           + STEE      +  + E E  E   F W   WYP+  + DLD  VP    ++G D+V+W
Sbjct: 61  SDSTEEKRIEEEYGGDKEEEGSE---FKWRDHWYPVSLVEDLDPNVPTPFQLLGRDLVLW 120

Query: 121 WDKNESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPP 180
           +D+N+  W  F+DLCPHRLAPLSEGR+D+ G LQC YHGW F G G C  IPQA   GP 
Sbjct: 121 FDRNDQKWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGPE 180

Query: 181 VHT--SKRACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIP-ELDDPSYTKLISN 240
                S RAC   +P++V   +L+ WP  D    D     +PP +P + D P ++ +   
Sbjct: 181 ARAVKSPRACAIKFPTMVSQGLLFVWP--DENGWDRANSIEPPRLPDDFDKPEFSTVTIQ 240

Query: 241 RDLPYGYEVLTENLMDPAHVPYAHYGIMGRQ 264
           RDL YGY+ L EN+ DP+H+ +AH+ + GR+
Sbjct: 241 RDLFYGYDTLMENVSDPSHIDFAHHKVTGRR 264

[Close]

BLAST of Csor.00g049350 vs. TAIR 10
Match: AT2G24820.1 (translocon at the inner envelope membrane of chloroplasts 55-II )

HSP 1 Score: 139.0 bits (349), Expect = 5.4e-33
Identity = 75/212 (35.38%), Postives = 111/212 (52.36%), Query Frame = 0


Query: 46  RFKLRASVSSTISTEEFEFASPFEVEAENERR-EDERFDWYAQWYPIMPICDLDKRVPHG 105
           R   R++V+ T  +++ E      +  E E+R E   +DW  +WYP+    ++ +  P G
Sbjct: 45  RLLRRSAVAGTAVSDQTEGGGDVLLNPEEEKRVEVADYDWTEEWYPLYLTKNVPEDAPLG 104

Query: 106 KTVMGIDVVVWWDKNESAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCK 165
            TV    +V++ D  E   + +ED CPHRLA LSEG++   GRL+C+YHGW F G G C 
Sbjct: 105 LTVYDRQIVLYKD-GEGTLRCYEDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCV 164

Query: 166 FIPQAPPDGPPVHTSKRACVAVYPSIVQNDILWFWPNSDPQYKDILVKKKPPYIPELDDP 225
            IPQ P         K ACV  Y       ++W W ++    K     +K P+      P
Sbjct: 165 KIPQLPAS---AKIPKAACVKTYEVKDSQGVVWVWMST----KTPPNPEKLPWFENFARP 224

Query: 226 SYTKLISNRDLPYGYEVLTENLMDPAHVPYAH 257
            +  + +  +LPY + +L ENLMDPAHVP +H
Sbjct: 225 GFFDISTTHELPYDHSILLENLMDPAHVPISH 247

[Close]

BLAST of Csor.00g049350 vs. TAIR 10
Match: AT1G44446.1 (Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain )

HSP 1 Score: 86.7 bits (213), Expect = 3.2e-17
Identity = 51/183 (27.87%), Postives = 79/183 (43.17%), Query Frame = 0


Query: 88  WYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVF----------EDLCPHRLAPL 147
           WYP+    DL             D +V  +  E  W +F           + C HR  PL
Sbjct: 221 WYPVAFTADLKH-----------DTMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPL 280

Query: 148 SEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVYPSIVQNDILW 207
             G +++ GR+QC YHGW ++  G+CK +P             +  +   P + Q  ++W
Sbjct: 281 DLGTVNE-GRIQCPYHGWEYSTDGECKKMPST--------KLLKVKIKSLPCLEQEGMIW 340

Query: 208 FWPNSDPQYKDILVKKKPPYIPELDDPS----YTKLISNRDLPYGYEVLTENLMDPAHVP 257
            WP  +P           P +P L  PS    + +L+   DLP  + +L +NL+D AH P
Sbjct: 341 IWPGDEP---------PAPILPSLQPPSGFLIHAELV--MDLPVEHGLLLDNLLDLAHAP 372

The following BLAST results are available for this feature:

BLAST of Csor.00g049350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W496	1.6e-101	70.04	Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidop...	[more]
Q9FYC2	2.0e-48	39.85	Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAO P...	[more]
Q0DV66	1.7e-47	39.92	Pheophorbide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947...	[more]
Q9SK50	7.6e-32	35.38	Protein TIC 55, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC55 PE=1 SV=1	[more]
O49931	2.9e-31	38.14	Protein TIC 55, chloroplastic OS=Pisum sativum OX=3888 GN=TIC55 PE=1 SV=1	[more]

BLAST of Csor.00g049350 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6588133.1	6.93e-206	100.00	Protochlorophyllide-dependent translocon component 52, chloroplastic, partial [C...	[more]
XP_022933573.1	1.69e-201	100.00	protochlorophyllide-dependent translocon component 52, chloroplastic [Cucurbita ...	[more]
KAG7022028.1	3.85e-198	88.16	Protochlorophyllide-dependent translocon component 52, chloroplastic [Cucurbita ...	[more]
XP_023531366.1	3.05e-197	98.13	protochlorophyllide-dependent translocon component 52, chloroplastic [Cucurbita ...	[more]
XP_022967161.1	3.34e-194	96.27	protochlorophyllide-dependent translocon component 52, chloroplastic [Cucurbita ...	[more]

BLAST of Csor.00g049350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F557	8.19e-202	100.00	protochlorophyllide-dependent translocon component 52, chloroplastic OS=Cucurbit...	[more]
A0A6J1HR92	1.62e-194	96.27	protochlorophyllide-dependent translocon component 52, chloroplastic OS=Cucurbit...	[more]
A0A1S3BQM5	9.52e-169	85.07	protochlorophyllide-dependent translocon component 52, chloroplastic-like OS=Cuc...	[more]
A0A5D3CEJ7	5.88e-168	78.89	Protochlorophyllide-dependent translocon component 52 OS=Cucumis melo var. makuw...	[more]
A0A0A0LZA2	1.53e-167	83.58	Rieske domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G600140 PE=4...	[more]

BLAST of Csor.00g049350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25650.1	1.1e-102	70.04	ACD1-like	[more]
AT4G25650.2	1.1e-102	70.04	ACD1-like	[more]
AT3G44880.1	1.4e-49	39.85	Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain	[more]
AT2G24820.1	5.4e-33	35.38	translocon at the inner envelope membrane of chloroplasts 55-II	[more]
AT1G44446.1	3.2e-17	27.87	Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PFAM	PF00355	Rieske	coord: 87..171 e-value: 1.7E-18 score: 66.3
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PROSITE	PS51296	RIESKE	coord: 88..198 score: 27.555429
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	GENE3D	2.102.10.10		coord: 83..222 e-value: 1.8E-36 score: 126.7
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	SUPERFAMILY	50022	ISP domain	coord: 77..204
None	No IPR available	GENE3D	3.90.380.10		coord: 223..267 e-value: 4.6E-6 score: 28.5
None	No IPR available	PANTHER	PTHR21266	IRON-SULFUR DOMAIN CONTAINING PROTEIN	coord: 63..262
None	No IPR available	PANTHER	PTHR21266:SF32	NEVERLAND	coord: 63..262
None	No IPR available	CDD	cd03480	Rieske_RO_Alpha_PaO	coord: 78..209 e-value: 1.269E-84 score: 247.236
None	No IPR available	SUPERFAMILY	55961	Bet v1-like	coord: 194..265

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g049350.m01	Csor.00g049350.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031967	organelle envelope
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0010277	chlorophyllide a oxygenase [overall] activity
molecular_function	GO:0046872	metal ion binding