Csor.00g047070 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGATTATCAGACCAATTTGCAGTGACCAAACTCTCCACTTTCACACCTCCAACAGTAATCTTACAATCAATTTTGTTTCTGTCTTGGAACAGTCTCACAATCCTTGTGTTATTTGCAGGCAGTGCAGCGGGGAATGTGATCTTCCATGATCTTCCCTCCTCTACCATTGATGCCTTTGTTATCTCAATTTTCTTTGCCTTTTCAGGTGCTTTGAGTGCTCTTTTGGTCCCTCAAAGGCACAACTTAGCTACATTTTGTGCCTTGTATTCTCTGGCTTCCATGGCTTCTGCTCTGCTTCTGCTGATTTGGGGATTGTATCACTCATTCGTTCTCGGCAAAGCTCGCTAG ATGAGATTATCAGACCAATTTGCAGTGACCAAACTCTCCACTTTCACACCTCCAACAGTAATCTTACAATCAATTTTGTTTCTGTCTTGGAACAGTCTCACAATCCTTGTGTTATTTGCAGGCAGTGCAGCGGGGAATGTGATCTTCCATGATCTTCCCTCCTCTACCATTGATGCCTTTGTTATCTCAATTTTCTTTGCCTTTTCAGGTGCTTTGAGTGCTCTTTTGGTCCCTCAAAGGCACAACTTAGCTACATTTTGTGCCTTGTATTCTCTGGCTTCCATGGCTTCTGCTCTGCTTCTGCTGATTTGGGGATTGTATCACTCATTCGTTCTCGGCAAAGCTCGCTAG ATGAGATTATCAGACCAATTTGCAGTGACCAAACTCTCCACTTTCACACCTCCAACAGTAATCTTACAATCAATTTTGTTTCTGTCTTGGAACAGTCTCACAATCCTTGTGTTATTTGCAGGCAGTGCAGCGGGGAATGTGATCTTCCATGATCTTCCCTCCTCTACCATTGATGCCTTTGTTATCTCAATTTTCTTTGCCTTTTCAGGTGCTTTGAGTGCTCTTTTGGTCCCTCAAAGGCACAACTTAGCTACATTTTGTGCCTTGTATTCTCTGGCTTCCATGGCTTCTGCTCTGCTTCTGCTGATTTGGGGATTGTATCACTCATTCGTTCTCGGCAAAGCTCGCTAG MRLSDQFAVTKLSTFTPPTVILQSILFLSWNSLTILVLFAGSAAGNVIFHDLPSSTIDAFVISIFFAFSGALSALLVPQRHNLATFCALYSLASMASALLLLIWGLYHSFVLGKAR Homology
BLAST of Csor.00g047070 vs. NCBI nr
Match: KAG6579131.1 (hypothetical protein SDJN03_23579, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 217 bits (553), Expect = 6.35e-71 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0
BLAST of Csor.00g047070 vs. NCBI nr
Match: KGN49809.1 (hypothetical protein Csa_004648 [Cucumis sativus]) HSP 1 Score: 166 bits (420), Expect = 1.93e-50 Identity = 91/117 (77.78%), Postives = 102/117 (87.18%), Query Frame = 0
BLAST of Csor.00g047070 vs. NCBI nr
Match: KAA0050243.1 (hypothetical protein E6C27_scaffold355G00870 [Cucumis melo var. makuwa] >TYJ98163.1 hypothetical protein E5676_scaffold180G00460 [Cucumis melo var. makuwa]) HSP 1 Score: 119 bits (299), Expect = 1.07e-32 Identity = 62/76 (81.58%), Postives = 66/76 (86.84%), Query Frame = 0
BLAST of Csor.00g047070 vs. NCBI nr
Match: KAG6601931.1 (hypothetical protein SDJN03_07164, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 107 bits (266), Expect = 3.85e-27 Identity = 69/120 (57.50%), Postives = 86/120 (71.67%), Query Frame = 0
BLAST of Csor.00g047070 vs. NCBI nr
Match: KGN49807.1 (hypothetical protein Csa_004664 [Cucumis sativus]) HSP 1 Score: 71.6 bits (174), Expect = 2.41e-13 Identity = 49/95 (51.58%), Postives = 64/95 (67.37%), Query Frame = 0
BLAST of Csor.00g047070 vs. ExPASy TrEMBL
Match: A0A0A0KLQ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137420 PE=4 SV=1) HSP 1 Score: 166 bits (420), Expect = 9.35e-51 Identity = 91/117 (77.78%), Postives = 102/117 (87.18%), Query Frame = 0
BLAST of Csor.00g047070 vs. ExPASy TrEMBL
Match: A0A5A7U2V8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00460 PE=4 SV=1) HSP 1 Score: 119 bits (299), Expect = 5.16e-33 Identity = 62/76 (81.58%), Postives = 66/76 (86.84%), Query Frame = 0
BLAST of Csor.00g047070 vs. ExPASy TrEMBL
Match: A0A0A0KN11 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137400 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.16e-13 Identity = 49/95 (51.58%), Postives = 64/95 (67.37%), Query Frame = 0
BLAST of Csor.00g047070 vs. ExPASy TrEMBL
Match: A0A061E956 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_011399 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 2.03e-12 Identity = 46/98 (46.94%), Postives = 59/98 (60.20%), Query Frame = 0
BLAST of Csor.00g047070 vs. ExPASy TrEMBL
Match: A0A5B7B2W8 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_032285 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 4.77e-10 Identity = 43/91 (47.25%), Postives = 57/91 (62.64%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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