Csor.00g047050 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATCAACTCCACAAGAAACCTCCCTAGATATGAAAATCAACTCGACAAGGATCCTGGAATCGGCAGTTTTACCTGGGGAGTCAGATTGCCTGCCAATTTACGTCAAAATGCAGAGGCCTTCTTCACCAGCCAAAATCCCTCAGCTTCAGAAGTCATTTCTTGGTCCAACTTTCCGGGCACTTTTAGCCTTGATTCTCAGTAGCTTGCCCTCTTCATCTCCACCATTTCCTATGGTTCTTTTCGGGGCTACTATGTTGATTGGCTTTGCAGTTTGA ATGGCATCAACTCCACAAGAAACCTCCCTAGATATGAAAATCAACTCGACAAGGATCCTGGAATCGGCAGTTTTACCTGGGGAGTCAGATTGCCTGCCAATTTACGTCAAAATGCAGAGGCCTTCTTCACCAGCCAAAATCCCTCAGCTTCAGAAGTCATTTCTTGGTCCAACTTTCCGGGCACTTTTAGCCTTGATTCTCAGTAGCTTGCCCTCTTCATCTCCACCATTTCCTATGGTTCTTTTCGGGGCTACTATGTTGATTGGCTTTGCAGTTTGA ATGGCATCAACTCCACAAGAAACCTCCCTAGATATGAAAATCAACTCGACAAGGATCCTGGAATCGGCAGTTTTACCTGGGGAGTCAGATTGCCTGCCAATTTACGTCAAAATGCAGAGGCCTTCTTCACCAGCCAAAATCCCTCAGCTTCAGAAGTCATTTCTTGGTCCAACTTTCCGGGCACTTTTAGCCTTGATTCTCAGTAGCTTGCCCTCTTCATCTCCACCATTTCCTATGGTTCTTTTCGGGGCTACTATGTTGATTGGCTTTGCAGTTTGA MASTPQETSLDMKINSTRILESAVLPGESDCLPIYVKMQRPSSPAKIPQLQKSFLGPTFRALLALILSSLPSSSPPFPMVLFGATMLIGFAV Homology
BLAST of Csor.00g047050 vs. NCBI nr
Match: KAG6579133.1 (hypothetical protein SDJN03_23581, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 174 bits (441), Expect = 1.34e-54 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of Csor.00g047050 vs. NCBI nr
Match: XP_022146444.1 (uncharacterized protein LOC111015658 [Momordica charantia]) HSP 1 Score: 71.6 bits (174), Expect = 1.77e-13 Identity = 54/106 (50.94%), Postives = 66/106 (62.26%), Query Frame = 0
BLAST of Csor.00g047050 vs. NCBI nr
Match: KGN49806.1 (hypothetical protein Csa_004683 [Cucumis sativus]) HSP 1 Score: 68.9 bits (167), Expect = 3.81e-12 Identity = 50/101 (49.50%), Postives = 57/101 (56.44%), Query Frame = 0
BLAST of Csor.00g047050 vs. NCBI nr
Match: KAA0050244.1 (putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ98162.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]) HSP 1 Score: 52.0 bits (123), Expect = 1.17e-05 Identity = 43/98 (43.88%), Postives = 50/98 (51.02%), Query Frame = 0
BLAST of Csor.00g047050 vs. NCBI nr
Match: KGN49808.1 (hypothetical protein Csa_004650 [Cucumis sativus]) HSP 1 Score: 52.0 bits (123), Expect = 1.20e-05 Identity = 42/103 (40.78%), Postives = 58/103 (56.31%), Query Frame = 0
BLAST of Csor.00g047050 vs. ExPASy TrEMBL
Match: A0A6J1CY58 (uncharacterized protein LOC111015658 OS=Momordica charantia OX=3673 GN=LOC111015658 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 8.57e-14 Identity = 54/106 (50.94%), Postives = 66/106 (62.26%), Query Frame = 0
BLAST of Csor.00g047050 vs. ExPASy TrEMBL
Match: A0A0A0KQ03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136900 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.85e-12 Identity = 50/101 (49.50%), Postives = 57/101 (56.44%), Query Frame = 0
BLAST of Csor.00g047050 vs. ExPASy TrEMBL
Match: A0A5D3BEH8 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00440 PE=4 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 5.66e-06 Identity = 43/98 (43.88%), Postives = 50/98 (51.02%), Query Frame = 0
BLAST of Csor.00g047050 vs. ExPASy TrEMBL
Match: A0A0A0KJP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137410 PE=4 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 5.83e-06 Identity = 42/103 (40.78%), Postives = 58/103 (56.31%), Query Frame = 0
BLAST of Csor.00g047050 vs. ExPASy TrEMBL
Match: A0A5A7U7U1 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00420 PE=4 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 3.57e-04 Identity = 34/69 (49.28%), Postives = 45/69 (65.22%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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