Csor.00g046850 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g046850
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionLeucine carboxyl methyltransferase
LocationCsor_Chr12: 4282714 .. 4283043 (+)
RNA-Seq ExpressionCsor.00g046850
SyntenyCsor.00g046850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAACATAACCCACACAGTCCTCTTAGCAGATTTTATGAACAAACCCTCAACACTCTTTCAAATTCTGTCTTCCATTTCTACTGTGATTGGCCTGAACATCTACTTCCATCCCTTGGATTTTCCAGCACTAAGCTATCACAGATCGGAGACCCGGATGCTCACTTCGGGCTTATGCACGATCCATTAAATCTCTTCAATAAAATCGCAGTTTACCAAGGTCATTGCAGACTCACCCTGATGATGGAAAACCTGCTGCCGCTTGTATTTGGTGCAGGCTTCTGGTTCGCCTCTGCTACCACCGATCGAATAAAGACAATCTGCAAGTAA

mRNA sequence

ATGCAACATAACCCACACAGTCCTCTTAGCAGATTTTATGAACAAACCCTCAACACTCTTTCAAATTCTGTCTTCCATTTCTACTGTGATTGGCCTGAACATCTACTTCCATCCCTTGGATTTTCCAGCACTAAGCTATCACAGATCGGAGACCCGGATGCTCACTTCGGGCTTATGCACGATCCATTAAATCTCTTCAATAAAATCGCAGTTTACCAAGGTCATTGCAGACTCACCCTGATGATGGAAAACCTGCTGCCGCTTGTATTTGGTGCAGGCTTCTGGTTCGCCTCTGCTACCACCGATCGAATAAAGACAATCTGCAAGTAA

Coding sequence (CDS)

ATGCAACATAACCCACACAGTCCTCTTAGCAGATTTTATGAACAAACCCTCAACACTCTTTCAAATTCTGTCTTCCATTTCTACTGTGATTGGCCTGAACATCTACTTCCATCCCTTGGATTTTCCAGCACTAAGCTATCACAGATCGGAGACCCGGATGCTCACTTCGGGCTTATGCACGATCCATTAAATCTCTTCAATAAAATCGCAGTTTACCAAGGTCATTGCAGACTCACCCTGATGATGGAAAACCTGCTGCCGCTTGTATTTGGTGCAGGCTTCTGGTTCGCCTCTGCTACCACCGATCGAATAAAGACAATCTGCAAGTAA

Protein sequence

MQHNPHSPLSRFYEQTLNTLSNSVFHFYCDWPEHLLPSLGFSSTKLSQIGDPDAHFGLMHDPLNLFNKIAVYQGHCRLTLMMENLLPLVFGAGFWFASATTDRIKTICK
Homology
[Close]
BLAST of Csor.00g046850 vs. NCBI nr
Match: KAG6585829.1 (hypothetical protein SDJN03_18562, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 238 bits (608), Expect = 1.53e-79
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0 

Query: 1   MQHNPHSPLSRFYEQTLNTLSNSVFHFYCDWPEHLLPSLGFSSTKLSQIGDPDAHFGLMH 60
           MQHNPHSPLSRFYEQTLNTLSNSVFHFYCDWPEHLLPSLGFSSTKLSQIGDPDAHFGLMH
Sbjct: 1   MQHNPHSPLSRFYEQTLNTLSNSVFHFYCDWPEHLLPSLGFSSTKLSQIGDPDAHFGLMH 60

Query: 61  DPLNLFNKIAVYQGHCRLTLMMENLLPLVFGAGFWFASATTDRIKTICK 109
           DPLNLFNKIAVYQGHCRLTLMMENLLPLVFGAGFWFASATTDRIKTICK
Sbjct: 61  DPLNLFNKIAVYQGHCRLTLMMENLLPLVFGAGFWFASATTDRIKTICK 109

[Close]
BLAST of Csor.00g046850 vs. NCBI nr
Match: XP_022951671.1 (uncharacterized protein LOC111454414 [Cucurbita moschata])

HSP 1 Score: 121 bits (304), Expect = 1.03e-30
Identity = 62/92 (67.39%), Postives = 67/92 (72.83%), Query Frame = 0 

Query: 9   LSRFYEQTLNTLSNSVFHFYCDWPEHLLPSLGFSSTKLSQIGDPDAHFGLMHDPLNLFNK 68
           L+ F  +   TLSNSVFHFYCDWPEHLLPSLGFSSTKLSQIGDPDAHFGLMHDPLNLFNK
Sbjct: 242 LADFMNKPSTTLSNSVFHFYCDWPEHLLPSLGFSSTKLSQIGDPDAHFGLMHDPLNLFNK 301

Query: 69  IAVY----QGH-------CRLTLMMENLLPLV 89
           I       Q H       CRL L+  + LPL+
Sbjct: 302 IRSLPRSLQTHPDDGKPCCRLYLVQASGLPLL 333

[Close]
BLAST of Csor.00g046850 vs. NCBI nr
Match: KAG6585597.1 (hypothetical protein SDJN03_18330, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 119 bits (298), Expect = 5.31e-30
Identity = 61/92 (66.30%), Postives = 66/92 (71.74%), Query Frame = 0 

Query: 9   LSRFYEQTLNTLSNSVFHFYCDWPEHLLPSLGFSSTKLSQIGDPDAHFGLMHDPLNLFNK 68
           L+ F  +   TLSNSVFHFYCDWPEHLLPSLGFSSTKLSQIGDPDAHFGLMHDPLNLFNK
Sbjct: 221 LADFMNKPSTTLSNSVFHFYCDWPEHLLPSLGFSSTKLSQIGDPDAHFGLMHDPLNLFNK 280

Query: 69  IAVY----QGH-------CRLTLMMENLLPLV 89
           I       Q H       CRL L+  +  PL+
Sbjct: 281 IRSLPRSLQTHPDDGKPCCRLYLVQASGSPLL 312

[Close]
BLAST of Csor.00g046850 vs. NCBI nr
Match: KAG7020511.1 (hypothetical protein SDJN02_17196 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 119 bits (298), Expect = 7.87e-30
Identity = 61/92 (66.30%), Postives = 66/92 (71.74%), Query Frame = 0 

Query: 9   LSRFYEQTLNTLSNSVFHFYCDWPEHLLPSLGFSSTKLSQIGDPDAHFGLMHDPLNLFNK 68
           L+ F  +   TLSNSVFHFYCDWPEHLLPSLGFSSTKLSQIGDPDAHFGLMHDPLNLFNK
Sbjct: 242 LADFMNKPSTTLSNSVFHFYCDWPEHLLPSLGFSSTKLSQIGDPDAHFGLMHDPLNLFNK 301

Query: 69  IAVY----QGH-------CRLTLMMENLLPLV 89
           I       Q H       CRL L+  +  PL+
Sbjct: 302 IRSLPRSLQTHPDDGKPCCRLYLVQASGSPLL 333

[Close]
BLAST of Csor.00g046850 vs. NCBI nr
Match: XP_023002415.1 (uncharacterized protein LOC111496264 [Cucurbita maxima])

HSP 1 Score: 118 bits (295), Expect = 2.17e-29
Identity = 60/92 (65.22%), Postives = 66/92 (71.74%), Query Frame = 0 

Query: 9   LSRFYEQTLNTLSNSVFHFYCDWPEHLLPSLGFSSTKLSQIGDPDAHFGLMHDPLNLFNK 68
           L+ F  +   TLSNSVFHFYCDWP+HLLPSLGFSSTKLSQIGDPDAHFGLMHDPLNLFNK
Sbjct: 242 LADFMNKPSTTLSNSVFHFYCDWPDHLLPSLGFSSTKLSQIGDPDAHFGLMHDPLNLFNK 301

Query: 69  IAVY----QGH-------CRLTLMMENLLPLV 89
           I       Q H       CRL L+  +  PL+
Sbjct: 302 IRSLPRSLQTHPDDGKPCCRLYLVQASGSPLL 333

[Close]
BLAST of Csor.00g046850 vs. ExPASy TrEMBL
Match: A0A6J1GI61 (uncharacterized protein LOC111454414 OS=Cucurbita moschata OX=3662 GN=LOC111454414 PE=3 SV=1)

HSP 1 Score: 121 bits (304), Expect = 4.97e-31
Identity = 62/92 (67.39%), Postives = 67/92 (72.83%), Query Frame = 0 

Query: 9   LSRFYEQTLNTLSNSVFHFYCDWPEHLLPSLGFSSTKLSQIGDPDAHFGLMHDPLNLFNK 68
           L+ F  +   TLSNSVFHFYCDWPEHLLPSLGFSSTKLSQIGDPDAHFGLMHDPLNLFNK
Sbjct: 242 LADFMNKPSTTLSNSVFHFYCDWPEHLLPSLGFSSTKLSQIGDPDAHFGLMHDPLNLFNK 301

Query: 69  IAVY----QGH-------CRLTLMMENLLPLV 89
           I       Q H       CRL L+  + LPL+
Sbjct: 302 IRSLPRSLQTHPDDGKPCCRLYLVQASGLPLL 333

[Close]
BLAST of Csor.00g046850 vs. ExPASy TrEMBL
Match: A0A6J1KNW1 (uncharacterized protein LOC111496264 OS=Cucurbita maxima OX=3661 GN=LOC111496264 PE=3 SV=1)

HSP 1 Score: 118 bits (295), Expect = 1.05e-29
Identity = 60/92 (65.22%), Postives = 66/92 (71.74%), Query Frame = 0 

Query: 9   LSRFYEQTLNTLSNSVFHFYCDWPEHLLPSLGFSSTKLSQIGDPDAHFGLMHDPLNLFNK 68
           L+ F  +   TLSNSVFHFYCDWP+HLLPSLGFSSTKLSQIGDPDAHFGLMHDPLNLFNK
Sbjct: 242 LADFMNKPSTTLSNSVFHFYCDWPDHLLPSLGFSSTKLSQIGDPDAHFGLMHDPLNLFNK 301

Query: 69  IAVY----QGH-------CRLTLMMENLLPLV 89
           I       Q H       CRL L+  +  PL+
Sbjct: 302 IRSLPRSLQTHPDDGKPCCRLYLVQASGSPLL 333

[Close]
BLAST of Csor.00g046850 vs. ExPASy TrEMBL
Match: A0A6J1CRT3 (uncharacterized protein LOC111013987 OS=Momordica charantia OX=3673 GN=LOC111013987 PE=3 SV=1)

HSP 1 Score: 110 bits (275), Expect = 9.22e-27
Identity = 55/90 (61.11%), Postives = 64/90 (71.11%), Query Frame = 0 

Query: 9   LSRFYEQTLNTLSNSVFHFYCDWPEHLLPSLGFSSTKLSQIGDPDAHFGLMHDPLNLFNK 68
           L+ F  +   TLSNS+FHFYCDWP+HLLPSLGFS+TKLSQIGDPDA+FGL+HDPLNLFNK
Sbjct: 243 LADFMNKPSTTLSNSIFHFYCDWPDHLLPSLGFSNTKLSQIGDPDANFGLVHDPLNLFNK 302

Query: 69  IAVY----QGH-------CRLTLMMENLLP 87
           I       Q H       CRL L+  +  P
Sbjct: 303 IRSLPRSMQTHPDDGKPCCRLYLVQASGSP 332

[Close]
BLAST of Csor.00g046850 vs. ExPASy TrEMBL
Match: A0A6J1KE32 (uncharacterized protein LOC111492397 OS=Cucurbita maxima OX=3661 GN=LOC111492397 PE=3 SV=1)

HSP 1 Score: 109 bits (272), Expect = 2.96e-26
Identity = 56/90 (62.22%), Postives = 62/90 (68.89%), Query Frame = 0 

Query: 9   LSRFYEQTLNTLSNSVFHFYCDWPEHLLPSLGFSSTKLSQIGDPDAHFGLMHDPLNLFNK 68
           L+ F  +   TLSNSVFHFYCDWP+HLLPSLGFS+T LSQIGD DAHFGLMHDPLNLFNK
Sbjct: 241 LADFMNKPSTTLSNSVFHFYCDWPDHLLPSLGFSTTTLSQIGDMDAHFGLMHDPLNLFNK 300

Query: 69  IAVY----QGH-------CRLTLMMENLLP 87
           I       Q H       CRL L+  +  P
Sbjct: 301 IRSLPRSLQTHPDDGKPCCRLYLVQASGSP 330

[Close]
BLAST of Csor.00g046850 vs. ExPASy TrEMBL
Match: A0A6J1HBI5 (uncharacterized protein LOC111462501 OS=Cucurbita moschata OX=3662 GN=LOC111462501 PE=3 SV=1)

HSP 1 Score: 109 bits (272), Expect = 2.96e-26
Identity = 56/90 (62.22%), Postives = 62/90 (68.89%), Query Frame = 0 

Query: 9   LSRFYEQTLNTLSNSVFHFYCDWPEHLLPSLGFSSTKLSQIGDPDAHFGLMHDPLNLFNK 68
           L+ F  +   TLSNSVFHFYCDWP+HLLPSLGFS+T LSQIGD DAHFGLMHDPLNLFNK
Sbjct: 241 LADFMNKPSTTLSNSVFHFYCDWPDHLLPSLGFSNTTLSQIGDMDAHFGLMHDPLNLFNK 300

Query: 69  IAVY----QGH-------CRLTLMMENLLP 87
           I       Q H       CRL L+  +  P
Sbjct: 301 IRSLPRSLQTHPDDGKPCCRLYLVQASGSP 330

[Close]
BLAST of Csor.00g046850 vs. TAIR 10
Match: AT5G42760.1 (Leucine carboxyl methyltransferase )

HSP 1 Score: 95.1 bits (235), Expect = 3.6e-20
Identity = 42/61 (68.85%), Postives = 49/61 (80.33%), Query Frame = 0 

Query: 9   LSRFYEQTLNTLSNSVFHFYCDWPEHLLPSLGFSSTKLSQIGDPDAHFGLMHDPLNLFNK 68
           L+ F  +   TL NSVFHFY DWP+ LLP+LGFS  KLSQIGDPDA+FGL+HDP NLFNK
Sbjct: 251 LADFMNKPSATLPNSVFHFYSDWPDQLLPTLGFSHVKLSQIGDPDANFGLLHDPRNLFNK 310

Query: 69  I 70
           +
Sbjct: 311 L 311

[Close]
BLAST of Csor.00g046850 vs. TAIR 10
Match: AT5G42760.2 (Leucine carboxyl methyltransferase )

HSP 1 Score: 95.1 bits (235), Expect = 3.6e-20
Identity = 42/61 (68.85%), Postives = 49/61 (80.33%), Query Frame = 0 

Query: 9   LSRFYEQTLNTLSNSVFHFYCDWPEHLLPSLGFSSTKLSQIGDPDAHFGLMHDPLNLFNK 68
           L+ F  +   TL NSVFHFY DWP+ LLP+LGFS  KLSQIGDPDA+FGL+HDP NLFNK
Sbjct: 247 LADFMNKPSATLPNSVFHFYSDWPDQLLPTLGFSHVKLSQIGDPDANFGLLHDPRNLFNK 306

Query: 69  I 70
           +
Sbjct: 307 L 307

The following BLAST results are available for this feature:
BLAST of Csor.00g046850 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g046850 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6585829.11.53e-79100.00hypothetical protein SDJN03_18562, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022951671.11.03e-3067.39uncharacterized protein LOC111454414 [Cucurbita moschata][more]
KAG6585597.15.31e-3066.30hypothetical protein SDJN03_18330, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7020511.17.87e-3066.30hypothetical protein SDJN02_17196 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_023002415.12.17e-2965.22uncharacterized protein LOC111496264 [Cucurbita maxima][more]
BLAST of Csor.00g046850 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GI614.97e-3167.39uncharacterized protein LOC111454414 OS=Cucurbita moschata OX=3662 GN=LOC1114544... [more]
A0A6J1KNW11.05e-2965.22uncharacterized protein LOC111496264 OS=Cucurbita maxima OX=3661 GN=LOC111496264... [more]
A0A6J1CRT39.22e-2761.11uncharacterized protein LOC111013987 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A6J1KE322.96e-2662.22uncharacterized protein LOC111492397 OS=Cucurbita maxima OX=3661 GN=LOC111492397... [more]
A0A6J1HBI52.96e-2662.22uncharacterized protein LOC111462501 OS=Cucurbita moschata OX=3662 GN=LOC1114625... [more]
BLAST of Csor.00g046850 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G42760.13.6e-2068.85Leucine carboxyl methyltransferase [more]
AT5G42760.23.6e-2068.85Leucine carboxyl methyltransferase [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g046850.m01Csor.00g046850.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032259 methylation
molecular_function GO:0008168 methyltransferase activity