Csor.00g046810 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g046810
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	COP9 signalosome complex subunit 8-like
Location	Csor_Chr19: 2865823 .. 2870702 (+)
RNA-Seq Expression	Csor.00g046810
Synteny	Csor.00g046810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTTGCTCGTCTCACTGAGGCTTTGGCTTTCAAATCTTACGAAAAGATCGCTGATATTTGCGACGACCTAATGCTCCAGGCAACTGAATTTCTCACTTTTTCATTTTCTTCACCTTTAATTTCTTCCCCTCACCTCATTTTTCCTCTCCGGTTTGTTAAAATTTACATTACTTGATCAGGCTGCAGCCGAGGGCGTTGATTATCAGGATGAATGGCCTTACGTGATCCATTTTCTTGGCTACCTTTACGTCGATGACATGTAAGATCATTTTCCTTGATGTCTTAATTGTTTCGTTTCAAATCATGAACAAAATTTTAGGTGGATTGATTATGGCACTGCAGTGTTATGTCGGAATGTTTTGTGGTTCTTGTCTTTTCATCTGGATTTTAAGCGCCATTCTACTTTTTGGCTCATTTCAATGTGTTCGGTAATGTTTTCATTGATTACTGCCTCCCATGGAAGTCTTAATCAATGTGAGAGTTTAACATTGTGTTCAGTTTTCCTTGGGAGTGTTTCGGAAACGAAAAAACAATATGGTCAAAACTGTCCTGTTGATTTGTCTAAGAAATATAGTTAACTTGTTCTTAGGGCTCTATAGTGTTACTTTGGAGTTATTTGTTTCAAAAAACATTGGTCCATATGTTAATTATTTATAGATTTTATCTTAGAATCATTGTTCAGTTTTTGTTTTTGGATTTGTTTTGTTCCTTCATTTTCCCTTATTTCTTCTTCATTCAATTTTTGTTGTTGGATGTTCTAGTAATTTTGTAGTGTTCGTATTGAAACTCTTGGTTGAAATTGAGTTTCCTTATCTGGACTTGTGGATTATCAGCTGACTGTTAACTGTTTAGTGGTTTCTTGCAGCAATAGTGCTCGATTTTTCTGGAAATCAATACCTTCCACTATGAAAGAACACCGACCAGAACTGGTTGCCGTTTGGAAAATTGCCCAAAAGCTATGGATTCAGGACCATAGGGGCGTGTATGAGGCTATTCATGGATTTGATTGGTGTCAAGAAGTTCAGGGCCTATTAGTTGCATTTTCAGGCAAGTCTCTTTAACTTTCTCCCTTTCCATGGCAACAATACATTTCATTGGTAATATGAAAGTTGCTTGTAAATTTATATGAACTCCATCAAAAGATTTGAGAAACACCCCATTACTTCTACTTAATTTCTGCCCCAGACCTTTGAATCCTCCTTTTTTTTTCTTCCACTTGAAATTAGAATCAAAATTAATCCAAACTTTTTAGAAAAATCTACACCCCTCTTCTCCATACTACTTCTTGACTCACTTAATGTCATCTGCACCTTCAGAAGAAAAAAATCCTTCGATATTGACAATACGATGCCTTTTCCACTTATTATGAAGAAATAACACATTGTCTGCACTTGTGGTGATAATTTCTTATTCCTCACATCTTCAAGATGGAACACGGAGGCTAGTTCTGGTATGCCATTTTCTCCTATTTTCTTCCCAAACATAACCGTAATTTTTTTTGGGTAAGAAATCGATCTTTGTTGGGCAGAATGAAATAACAGACTAGGGCATATAAAAAAAAAAAATCCAACAAATCAAACTAAGAATAATAATGAAAACTTGTTGCACAAAAAACAACAAGAATTTTAAAATTATGATATGAATCTTGCACATGAAAATACTTTTTGTTTTCATGTTGTAGATCTTTACAGAAGGAGAATGTTTCAGTTGCTGGTGTCTGCATATTCTACAATAAGCATCCATGATGCAGCTCACTTCTTGGGAATGAATGAGGAAGAAGCCAAAAATTGTAAGCTTCTTTATTAACCAAGTACTTCTGTATTCTCCCTCAACTTTTATGACTGTAATATACTTTCTTGTAAAGGAATTTAAAACCTTTCATTGGGATAGTGGAAAGTTATTAACGATAGAAGGCCTTGTTTTTGTAGTCTCTTGGGCAGGGGTTCTCCCTACCCCAGCGGCTAGGTTGTATTTTTCTTTGGGCCTTAATCTATTGATCATTTTATATCATAAATATATATATGTATGTATATCTACATACACACAGTAGGCATTGATTCAAATAAATATTGACCACCTTCTAACCCTTTGGTCACCTAGTCATGGAAGATGGAGTTTAATGTGAACAATGGTGTAATCGATCATCCTCTAGTTTCAGTTCCGATAGGTGACATTGCATTTGCTGAACCAAGAATTGATGTTTCTAATGAGTCTAGTCTGTATGGTCATCAACAATCTGAGAATCTTTAGAGTTCCCTGCCATTTTTACGAGCATTCTTCCTATGATGTGCCTTTTGAGATTCGCGAGCCCCCTTTCAATGCCTCCATTAAAGGTCTCAAGTTCTCAAAACCCTTGAGGGTTAAAGAGGTTAAACATTGTTACTTTGCAGCTTATTCCTTGTGCTATTCTTGGAAAAGTGAACCTATCATTTCTTCCCATTCACCCACCGAGGTTAATACTATGGATCTTGATTTAGTTGAACAAAATTGTTCACATCTCTTGGTCTCCTCTGTAAGACAAGTGGGTAGTTAGAAGTTAACAACAATTGCTCCTTCAAAGTCTCCAATCCACAATCATTGTAGCCATAAAAATTCAATTTGATACATGGTGTCATCTATTCAATGAAAGACCCTTCAAATCCTCTTCATACCTTCCGGTGTGATGACTTGGTTGTTGTATCTAAAATTAAACTAAGCAGTGCAGAATACTGTTTAGTTTAACTTTGTTGTTGAATCCCTTTCGGTGATTGAAGACCCACTTTCCCACGCTTTTGAGTTTCTATTTCAAAAAAAGATAAAAAAAGGTTCTTCCTCCACATTAATGCCTAAAAAATGTGCCTTCTTTATTAAAGCTTGTGGTCTTGAATTACGTAAAATCCCTTCAACATCTGAAGGACAATTTTTTAAAAGGTCTCATAGGGTCTCATTTCGTCACTTCATTTTTTGGAAGTTAGAGTGTAATGCTTCTTTTATTTTATAGGCGGTTTCTTTTCCTATAGTTTCAGTTGCAACTTCTTTACTATTAGTTCCTCGATTGTTTTTATCTAGTTTGGGGTTTCAGTTCTCAGAGTATCTTAGGTGTTTCAGTTCTGAGAGTATCTCAGGTGCTTTGGTATTCCTTTTTTGGCACATTGTGTGGTTTCCCGAGGGATGGGTTCCTTGGTTCAACAACTTCGTTTTTATTGACCTTCATGTCGTGCCTTGGTGGAATTGAGTTGGTTTGTCAGATCCTTCTTTGGAGAAGGAATTTTGGCAAGCTTTTACTAGTATTGGTTCATGTCGGGTCTTTTTTGTTTCTCAGCCGTTTTCATTTTATTGTAATTGTTGTAAGTGCTTGTTCTTTTTTCCTTTTCACTCCCTGTGGGAGTTTGTATTGTTTGTACATTTCCCTTTATATCAATGAAAAGTTGTTTGTTGATTAAAAAAAGTCATTTTCATTTTGTGCAATTTTCAACAATTCTCTCAACAAGTCTTGGGTCAAGGAGGGAGTTTTGGTCATGTCCTCTCCATCCTTGTTCCTTGTCAGCTATGTTTTTGTCTAATCGTATCTTATCTGCTACCTACTATGGTCTTTACAAAATGCTTGATCTCCATTGAAAGTAAATCTTTTGATTTGCTTTTGGTTGGGTCTTAAAAGGCAGAACGACACAAGTCTTCCATAGCCAATCTCTTATCTTTCCTTTAGTGATTGTTTCAAAGACATGTTAGTCTCCCTGAAGAAGTACAGATGTTTTGGGAAAGTTAGGTGCAAAGATTTTGTCTTATGGAGAGGAAAAACGTCCAGCAATTTCAGTATAAGTCTTTAAAGTAGTATCGTAGTAATAAGTTAAGCATTTTTCGTAGCTGGAGTTCCAGATGTGTTTTTGATTTTGATGACTATATCCTGGACCAGAAGTAAAACCTCCTCCTCGTAGAGTTCCTATCTCCCACTTCCAGTGCTTGGCTAAAGTTCTTAAATGTAAAGTTGAAGACTTGTAAGTGTAAACCACCTTAGGATGTTACTAAATTTGTTAAGATTTCTTAGGCATCGAAGGTGTATCCTAAGAAGCTGTGACGTAGGGGTTTATGAGCCATTTTTTCTATTAGTTTAAGCTAGACATCATAAGCTAGTTCTTTATGTTTAAGCCGTTTGTTATGAGTTCTAGCAGCTTTTGGAGGTCGCTCTTAATTGGTTATTTGTAGCTGTTGGAGCTGTTAAGGATGTTATGTCTACTCAATGCCTATAAATACGTGTACCTGTAGCTGTATTTCGGTTGATTATTCATTACTAAGACGACCCTCCTTTTTTATGTGATTTTCATCGAGATGAGAGCCTAAATTATGATGCTACAATCAAGAGTAGTAGAGAAAATTGTCACCAAGTACATAGCATGCACCACTGCTACACCACCACTCGGGAGACAGACCATTTTGCTTTTGATTTGGGGAGAAACTCAGCTGCTACCGATCGGGGCGGGTAAAAACATTGACCTGCGAACCTGTCCAGTGATGCAAGACTTTGTATAGCAAGACCTTTATTACTTAAATTATCTCGATATTGGCCTATTTTTTCTCGCAAACAAGTGCTGTTTTGTAGTTCGAGATAATAATTGTTAAATAATTTGCATGACAGAAGTGTTCCTGTAAGTAAGCTGGTTTTGAAATGGTTGTGTTACTTGGATGATGTACGTTAGGTGTTTCCCACATCCCTTGTGGCTAGTTTACAAACAATAAGGGGTGTTTTGTATTTGTGCAGATGTAACAAGGCGAGGATGGATTGTTGATGTTGCTTCTGAAATGTTGACTGTGAAGAAACAAGAAATTGGGAGAGAGCAGAAGTTAGATTCCAGTAAATTGCAGCGCTTGACCGAATATGTTTTCCATCTTGAACATTGA

mRNA sequence

ATGGATTTTGCTCGTCTCACTGAGGCTTTGGCTTTCAAATCTTACGAAAAGATCGCTGATATTTGCGACGACCTAATGCTCCAGGCTGCAGCCGAGGGCGTTGATTATCAGGATGAATGGCCTTACGTGATCCATTTTCTTGGCTACCTTTACGTCGATGACATCAATAGTGCTCGATTTTTCTGGAAATCAATACCTTCCACTATGAAAGAACACCGACCAGAACTGGTTGCCGTTTGGAAAATTGCCCAAAAGCTATGGATTCAGGACCATAGGGGCGTGTATGAGGCTATTCATGGATTTGATTGGTGTCAAGAAGTTCAGGGCCTATTAGTTGCATTTTCAGATCTTTACAGAAGGAGAATGTTTCAGTTGCTGGTGTCTGCATATTCTACAATAAGCATCCATGATGCAGCTCACTTCTTGGGAATGAATGAGGAAGAAGCCAAAAATTATGTAACAAGGCGAGGATGGATTGTTGATGTTGCTTCTGAAATGTTGACTGTGAAGAAACAAGAAATTGGGAGAGAGCAGAAGTTAGATTCCAGTAAATTGCAGCGCTTGACCGAATATGTTTTCCATCTTGAACATTGA

Coding sequence (CDS)

ATGGATTTTGCTCGTCTCACTGAGGCTTTGGCTTTCAAATCTTACGAAAAGATCGCTGATATTTGCGACGACCTAATGCTCCAGGCTGCAGCCGAGGGCGTTGATTATCAGGATGAATGGCCTTACGTGATCCATTTTCTTGGCTACCTTTACGTCGATGACATCAATAGTGCTCGATTTTTCTGGAAATCAATACCTTCCACTATGAAAGAACACCGACCAGAACTGGTTGCCGTTTGGAAAATTGCCCAAAAGCTATGGATTCAGGACCATAGGGGCGTGTATGAGGCTATTCATGGATTTGATTGGTGTCAAGAAGTTCAGGGCCTATTAGTTGCATTTTCAGATCTTTACAGAAGGAGAATGTTTCAGTTGCTGGTGTCTGCATATTCTACAATAAGCATCCATGATGCAGCTCACTTCTTGGGAATGAATGAGGAAGAAGCCAAAAATTATGTAACAAGGCGAGGATGGATTGTTGATGTTGCTTCTGAAATGTTGACTGTGAAGAAACAAGAAATTGGGAGAGAGCAGAAGTTAGATTCCAGTAAATTGCAGCGCTTGACCGAATATGTTTTCCATCTTGAACATTGA

Protein sequence

MDFARLTEALAFKSYEKIADICDDLMLQAAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLLVAFSDLYRRRMFQLLVSAYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEYVFHLEH

Homology

[Close]

BLAST of Csor.00g046810 vs. ExPASy Swiss-Prot
Match: P43255 (COP9 signalosome complex subunit 8 OS=Arabidopsis thaliana OX=3702 GN=CSN8 PE=1 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.1e-75
Identity = 130/197 (65.99%), Postives = 157/197 (79.70%), Query Frame = 0


Query: 1   MDFARLTEALAFKSYEKIADICDDLMLQAAAEGVDYQDEWPYVIHFLGYLYVDDINSARF 60
           MD + + EALA KS++KIADICD LMLQ A+EG++Y D+WPY IH LGY YVDD +SARF
Sbjct: 1   MDLSPVKEALAAKSFDKIADICDTLMLQVASEGIEYHDDWPYAIHLLGYFYVDDCDSARF 60

Query: 61  FWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLLVAFSDLYRR 120
            WK IP+ +KE +PE+VA W I QKLW  D+ GVYEAI G+DW QE + ++ AFSDLY +
Sbjct: 61  LWKRIPTAIKERKPEVVAAWGIGQKLWTHDYAGVYEAIRGYDWSQEAKDMVAAFSDLYTK 120

Query: 121 RMFQLLVSAYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKL 180
           RMFQLL+SAYSTI+IHD A FLGM E++A  YV   GW VD AS+M +VKKQ + REQK+
Sbjct: 121 RMFQLLLSAYSTITIHDLALFLGMTEDDATTYVVENGWTVDAASQMASVKKQAVKREQKV 180

Query: 181 DSSKLQRLTEYVFHLEH 198
           DSSKLQRLTEYVFHLEH
Sbjct: 181 DSSKLQRLTEYVFHLEH 197

[Close]

BLAST of Csor.00g046810 vs. ExPASy Swiss-Prot
Match: Q6GQA6 (COP9 signalosome complex subunit 8 OS=Xenopus laevis OX=8355 GN=csn8 PE=2 SV=2)

HSP 1 Score: 117.5 bits (293), Expect = 1.7e-25
Identity = 62/185 (33.51%), Postives = 106/185 (57.30%), Query Frame = 0


Query: 14  SYEKIADICDDLMLQAAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHR 73
           S++K+ + C++  L+A   G+     +  ++    YL  +D+N+AR+ WK IPS +K   
Sbjct: 14  SFQKLQEQCEEQELEAPG-GIASPQVYNQLLAL--YLLHNDLNNARYLWKRIPSAIKSSH 73

Query: 74  PELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLLVAFSDLYRRRMFQLLVSAYSTI 133
            EL  +W++ QK+W +D  G+Y +I  + W + +Q ++ A  D  ++R F L+  AY++I
Sbjct: 74  SELGGIWEVGQKIWQRDFPGIYTSISAYQWSENIQQIMEAVRDATQQRAFGLVSQAYTSI 133

Query: 134 SIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKL-DSSKLQRLTEYV 193
           S  D A F+G+  EEA   V  +GW  D A+ M+  KK +      + +  +L RLT+YV
Sbjct: 134 SADDFAAFVGLPVEEAVKGVLEQGWQADSATGMVMPKKPDSAPLSLIPNEQQLARLTDYV 193

Query: 194 FHLEH 198
             LE+
Sbjct: 194 AFLEN 195

[Close]

BLAST of Csor.00g046810 vs. ExPASy Swiss-Prot
Match: Q6P637 (COP9 signalosome complex subunit 8 OS=Xenopus tropicalis OX=8364 GN=csn8 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.7e-25
Identity = 62/185 (33.51%), Postives = 106/185 (57.30%), Query Frame = 0


Query: 14  SYEKIADICDDLMLQAAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHR 73
           S++++ + C++  L+A   G+     +  ++    YL  +D+N+AR+ WK IP  +K   
Sbjct: 12  SFQRLQEQCEEQELEAPG-GIANPQVYSQLLAL--YLLHNDMNNARYLWKRIPPAIKSAH 71

Query: 74  PELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLLVAFSDLYRRRMFQLLVSAYSTI 133
            EL  +W++ QK+W +D  G+Y +I    W + +Q ++ A  D  RRR F L+  AY++I
Sbjct: 72  SELGGIWEVGQKIWQRDFPGIYTSISACQWSEAIQPVMEAVRDATRRRAFGLVSQAYTSI 131

Query: 134 SIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKL-DSSKLQRLTEYV 193
           S  D A F+G++ EEA   V  +GW  D+A+ M+  KK +      + +  +L RLT+YV
Sbjct: 132 SADDFAAFVGLSVEEAVKGVIEQGWQADLATRMVMPKKPDSAPLSLIPNEQQLARLTDYV 191

Query: 194 FHLEH 198
             LE+
Sbjct: 192 AFLEN 193

[Close]

BLAST of Csor.00g046810 vs. ExPASy Swiss-Prot
Match: Q7ZUZ0 (COP9 signalosome complex subunit 8 OS=Danio rerio OX=7955 GN=cops8 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.7e-23
Identity = 53/150 (35.33%), Postives = 86/150 (57.33%), Query Frame = 0


Query: 49  YLYVDDINSARFFWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQ 108
           YL  +D+N+AR+ WK IP  +K   PE+ A+W + Q++W +D  G+Y AI  + W + + 
Sbjct: 42  YLLHNDMNNARYLWKRIPQAIKTANPEMAAIWAVGQRIWQRDFPGIYSAIAAYQWSESIL 101

Query: 109 GLLVAFSDLYRRRMFQLLVSAYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLT 168
            ++ A  +  RRR + L+  AY++IS  D A F+G + EEA   V   GW  D  + M+ 
Sbjct: 102 PVMEALRESTRRRAYGLVAQAYTSISAEDFAAFVGYSVEEAVKGVVSHGWQADPNTRMIM 161

Query: 169 VKKQEIGREQKL-DSSKLQRLTEYVFHLEH 198
            +K +      + +  +L RLT+YV  LE+
Sbjct: 162 PQKPDPPPVSLVPNEQQLARLTDYVAFLEN 191

[Close]

BLAST of Csor.00g046810 vs. ExPASy Swiss-Prot
Match: Q8VBV7 (COP9 signalosome complex subunit 8 OS=Mus musculus OX=10090 GN=Cops8 PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.1e-22
Identity = 65/204 (31.86%), Postives = 101/204 (49.51%), Query Frame = 0


Query: 14  SYEKIADICDDLMLQAAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTMKEHR 73
           S+ K+ D C++  L+A   G+     +  ++    YL  +D+N+AR+ WK IP  +K   
Sbjct: 12  SFRKLLDQCENQELEAPG-GIATPPVYGQLLAL--YLLQNDMNNARYLWKRIPPAIKSAN 71

Query: 74  PELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLLVAFSDLYRRRMFQLLVSAYSTI 133
            EL  +W + Q++W +D  G+Y  I+   W + VQ ++ A  D  RRR F L+  AY++I
Sbjct: 72  SELGGIWSVGQRIWQRDFPGIYTTINAHQWSETVQPIMEALRDATRRRAFALVSQAYTSI 131

Query: 134 SIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKLDSS---------- 193
              D A F+G+  EEA   V  +GW  D  + M+  +K   G    LD S          
Sbjct: 132 IADDFAAFVGLPVEEAVKGVLEQGWQADSTTRMVLPRKPASG---TLDVSLNRFIPLSEP 191

Query: 194 ----------KLQRLTEYVFHLEH 198
                     +L RLT+YV  LE+
Sbjct: 192 APVPPIPNEQQLARLTDYVAFLEN 209

[Close]

BLAST of Csor.00g046810 vs. NCBI nr
Match: KAG6571729.1 (COP9 signalosome complex subunit 8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 401 bits (1031), Expect = 3.58e-141
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MDFARLTEALAFKSYEKIADICDDLMLQAAAEGVDYQDEWPYVIHFLGYLYVDDINSARF 60
           MDFARLTEALAFKSYEKIADICDDLMLQAAAEGVDYQDEWPYVIHFLGYLYVDDINSARF
Sbjct: 1   MDFARLTEALAFKSYEKIADICDDLMLQAAAEGVDYQDEWPYVIHFLGYLYVDDINSARF 60

Query: 61  FWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLLVAFSDLYRR 120
           FWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLLVAFSDLYRR
Sbjct: 61  FWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLLVAFSDLYRR 120

Query: 121 RMFQLLVSAYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKL 180
           RMFQLLVSAYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKL
Sbjct: 121 RMFQLLVSAYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKL 180

Query: 181 DSSKLQRLTEYVFHLEH 197
           DSSKLQRLTEYVFHLEH
Sbjct: 181 DSSKLQRLTEYVFHLEH 197

[Close]

BLAST of Csor.00g046810 vs. NCBI nr
Match: XP_023553641.1 (COP9 signalosome complex subunit 8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 394 bits (1012), Expect = 2.83e-138
Identity = 194/197 (98.48%), Postives = 196/197 (99.49%), Query Frame = 0


Query: 1   MDFARLTEALAFKSYEKIADICDDLMLQAAAEGVDYQDEWPYVIHFLGYLYVDDINSARF 60
           MDFARLTEALAFKSYEKIADICDDLMLQAAAEGVDYQDEWPYVIHFLGYLYVDDINSARF
Sbjct: 1   MDFARLTEALAFKSYEKIADICDDLMLQAAAEGVDYQDEWPYVIHFLGYLYVDDINSARF 60

Query: 61  FWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLLVAFSDLYRR 120
           FWKSIPST+KE+RPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLLVAFSDLYRR
Sbjct: 61  FWKSIPSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLLVAFSDLYRR 120

Query: 121 RMFQLLVSAYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKL 180
           RMFQLLVSAYSTISI DAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKL
Sbjct: 121 RMFQLLVSAYSTISIRDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKL 180

Query: 181 DSSKLQRLTEYVFHLEH 197
           DSSKLQRLTEYVFHLEH
Sbjct: 181 DSSKLQRLTEYVFHLEH 197

[Close]

BLAST of Csor.00g046810 vs. NCBI nr
Match: XP_022963990.1 (COP9 signalosome complex subunit 8-like [Cucurbita moschata])

HSP 1 Score: 391 bits (1004), Expect = 4.69e-137
Identity = 192/197 (97.46%), Postives = 195/197 (98.98%), Query Frame = 0


Query: 1   MDFARLTEALAFKSYEKIADICDDLMLQAAAEGVDYQDEWPYVIHFLGYLYVDDINSARF 60
           MDFARLTEALAFKSYEKIADICDDLMLQAAAEGVDYQDEWPYVIHFLGYLYVDDINSARF
Sbjct: 1   MDFARLTEALAFKSYEKIADICDDLMLQAAAEGVDYQDEWPYVIHFLGYLYVDDINSARF 60

Query: 61  FWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLLVAFSDLYRR 120
           FWKSIPST+KE+RPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQG+LVAFSDLYRR
Sbjct: 61  FWKSIPSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVAFSDLYRR 120

Query: 121 RMFQLLVSAYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKL 180
           RMFQLLVSAYSTISIHDAAHFLGMN EEAKNYVT RGWIVDVASEMLTVKKQEIGREQKL
Sbjct: 121 RMFQLLVSAYSTISIHDAAHFLGMNGEEAKNYVTGRGWIVDVASEMLTVKKQEIGREQKL 180

Query: 181 DSSKLQRLTEYVFHLEH 197
           DSSKLQRLTEYVFHLEH
Sbjct: 181 DSSKLQRLTEYVFHLEH 197

[Close]

BLAST of Csor.00g046810 vs. NCBI nr
Match: XP_022967528.1 (COP9 signalosome complex subunit 8-like [Cucurbita maxima])

HSP 1 Score: 388 bits (996), Expect = 7.79e-136
Identity = 189/197 (95.94%), Postives = 195/197 (98.98%), Query Frame = 0


Query: 1   MDFARLTEALAFKSYEKIADICDDLMLQAAAEGVDYQDEWPYVIHFLGYLYVDDINSARF 60
           MDFARLTEALAFKSYEKIADICD+LMLQAAAEGVDYQDEWPYVIHFLG+LYVDDINSARF
Sbjct: 1   MDFARLTEALAFKSYEKIADICDELMLQAAAEGVDYQDEWPYVIHFLGHLYVDDINSARF 60

Query: 61  FWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLLVAFSDLYRR 120
            WKSIPST+KE+RPELVAVWKIAQ+LWIQDHRGVYEAIHGFDWCQEVQG+LVAFSDLYRR
Sbjct: 61  LWKSIPSTIKENRPELVAVWKIAQRLWIQDHRGVYEAIHGFDWCQEVQGILVAFSDLYRR 120

Query: 121 RMFQLLVSAYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKL 180
           RMFQLLVSAYSTISIHDAAHFLGMNEEE KNYVTRRGWIVDVASEMLTVKKQEIGREQKL
Sbjct: 121 RMFQLLVSAYSTISIHDAAHFLGMNEEETKNYVTRRGWIVDVASEMLTVKKQEIGREQKL 180

Query: 181 DSSKLQRLTEYVFHLEH 197
           DSSKLQRLTEYVFHLEH
Sbjct: 181 DSSKLQRLTEYVFHLEH 197

[Close]

BLAST of Csor.00g046810 vs. NCBI nr
Match: XP_023531250.1 (COP9 signalosome complex subunit 8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 353 bits (905), Expect = 5.82e-122
Identity = 172/197 (87.31%), Postives = 183/197 (92.89%), Query Frame = 0


Query: 1   MDFARLTEALAFKSYEKIADICDDLMLQAAAEGVDYQDEWPYVIHFLGYLYVDDINSARF 60
           MDFARLTEAL  KSYEKIADICD+LMLQAAAEG+ YQDEWPY IHFLGYLYVDDINSARF
Sbjct: 1   MDFARLTEALDSKSYEKIADICDELMLQAAAEGIAYQDEWPYTIHFLGYLYVDDINSARF 60

Query: 61  FWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLLVAFSDLYRR 120
            WK+IPST+KE+RPELVAVWKI QKLWI+DH GVYEAI GFDWCQEV+GLL AFSDLYR+
Sbjct: 61  LWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIDGFDWCQEVRGLLAAFSDLYRK 120

Query: 121 RMFQLLVSAYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKL 180
           RMFQLLVSAYSTISIHD AHFLGMNEEEAKNYVT +GWIVDVAS+M TVKKQ+I  EQKL
Sbjct: 121 RMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIVTEQKL 180

Query: 181 DSSKLQRLTEYVFHLEH 197
           DSSKLQRLTEYVFHLEH
Sbjct: 181 DSSKLQRLTEYVFHLEH 197

[Close]

BLAST of Csor.00g046810 vs. ExPASy TrEMBL
Match: A0A6J1HJJ3 (COP9 signalosome complex subunit 8-like OS=Cucurbita moschata OX=3662 GN=LOC111464125 PE=4 SV=1)

HSP 1 Score: 391 bits (1004), Expect = 2.27e-137
Identity = 192/197 (97.46%), Postives = 195/197 (98.98%), Query Frame = 0


Query: 1   MDFARLTEALAFKSYEKIADICDDLMLQAAAEGVDYQDEWPYVIHFLGYLYVDDINSARF 60
           MDFARLTEALAFKSYEKIADICDDLMLQAAAEGVDYQDEWPYVIHFLGYLYVDDINSARF
Sbjct: 1   MDFARLTEALAFKSYEKIADICDDLMLQAAAEGVDYQDEWPYVIHFLGYLYVDDINSARF 60

Query: 61  FWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLLVAFSDLYRR 120
           FWKSIPST+KE+RPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQG+LVAFSDLYRR
Sbjct: 61  FWKSIPSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVAFSDLYRR 120

Query: 121 RMFQLLVSAYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKL 180
           RMFQLLVSAYSTISIHDAAHFLGMN EEAKNYVT RGWIVDVASEMLTVKKQEIGREQKL
Sbjct: 121 RMFQLLVSAYSTISIHDAAHFLGMNGEEAKNYVTGRGWIVDVASEMLTVKKQEIGREQKL 180

Query: 181 DSSKLQRLTEYVFHLEH 197
           DSSKLQRLTEYVFHLEH
Sbjct: 181 DSSKLQRLTEYVFHLEH 197

[Close]

BLAST of Csor.00g046810 vs. ExPASy TrEMBL
Match: A0A6J1HVB2 (COP9 signalosome complex subunit 8-like OS=Cucurbita maxima OX=3661 GN=LOC111467007 PE=4 SV=1)

HSP 1 Score: 388 bits (996), Expect = 3.77e-136
Identity = 189/197 (95.94%), Postives = 195/197 (98.98%), Query Frame = 0


Query: 1   MDFARLTEALAFKSYEKIADICDDLMLQAAAEGVDYQDEWPYVIHFLGYLYVDDINSARF 60
           MDFARLTEALAFKSYEKIADICD+LMLQAAAEGVDYQDEWPYVIHFLG+LYVDDINSARF
Sbjct: 1   MDFARLTEALAFKSYEKIADICDELMLQAAAEGVDYQDEWPYVIHFLGHLYVDDINSARF 60

Query: 61  FWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLLVAFSDLYRR 120
            WKSIPST+KE+RPELVAVWKIAQ+LWIQDHRGVYEAIHGFDWCQEVQG+LVAFSDLYRR
Sbjct: 61  LWKSIPSTIKENRPELVAVWKIAQRLWIQDHRGVYEAIHGFDWCQEVQGILVAFSDLYRR 120

Query: 121 RMFQLLVSAYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKL 180
           RMFQLLVSAYSTISIHDAAHFLGMNEEE KNYVTRRGWIVDVASEMLTVKKQEIGREQKL
Sbjct: 121 RMFQLLVSAYSTISIHDAAHFLGMNEEETKNYVTRRGWIVDVASEMLTVKKQEIGREQKL 180

Query: 181 DSSKLQRLTEYVFHLEH 197
           DSSKLQRLTEYVFHLEH
Sbjct: 181 DSSKLQRLTEYVFHLEH 197

[Close]

BLAST of Csor.00g046810 vs. ExPASy TrEMBL
Match: A0A6J1JQ49 (COP9 signalosome complex subunit 8-like OS=Cucurbita maxima OX=3661 GN=LOC111486724 PE=4 SV=1)

HSP 1 Score: 351 bits (900), Expect = 1.63e-121
Identity = 171/197 (86.80%), Postives = 183/197 (92.89%), Query Frame = 0


Query: 1   MDFARLTEALAFKSYEKIADICDDLMLQAAAEGVDYQDEWPYVIHFLGYLYVDDINSARF 60
           MDFARLTEAL  KSYEKIADICD+LMLQAAAEG+ YQDEWPY IHFLGYLYVDDINSARF
Sbjct: 1   MDFARLTEALDSKSYEKIADICDELMLQAAAEGIAYQDEWPYTIHFLGYLYVDDINSARF 60

Query: 61  FWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLLVAFSDLYRR 120
            WK+IPST+KE+RPELVAVWKI QKLWI+D+ GVYEAI GFDWCQEV+GLL AFSDLYR+
Sbjct: 61  LWKAIPSTIKENRPELVAVWKIGQKLWIRDYGGVYEAIDGFDWCQEVRGLLAAFSDLYRK 120

Query: 121 RMFQLLVSAYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKL 180
           RMFQLLVSAYSTISIHD AHFLGMNEEEAKNYVT +GWIVDVAS+M TVKKQ+I  EQKL
Sbjct: 121 RMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTAQGWIVDVASQMFTVKKQQIVTEQKL 180

Query: 181 DSSKLQRLTEYVFHLEH 197
           DSSKLQRLTEYVFHLEH
Sbjct: 181 DSSKLQRLTEYVFHLEH 197

[Close]

BLAST of Csor.00g046810 vs. ExPASy TrEMBL
Match: A0A6J1EJA8 (COP9 signalosome complex subunit 8-like OS=Cucurbita moschata OX=3662 GN=LOC111434662 PE=4 SV=1)

HSP 1 Score: 347 bits (890), Expect = 5.45e-120
Identity = 168/197 (85.28%), Postives = 180/197 (91.37%), Query Frame = 0


Query: 1   MDFARLTEALAFKSYEKIADICDDLMLQAAAEGVDYQDEWPYVIHFLGYLYVDDINSARF 60
           MDFARLTEAL  KSYE IADICD+LMLQAAAEG+ YQDEWPY IHFLGY YVDDINSARF
Sbjct: 1   MDFARLTEALDSKSYENIADICDELMLQAAAEGISYQDEWPYTIHFLGYFYVDDINSARF 60

Query: 61  FWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLLVAFSDLYRR 120
            WK+IPST+KE+RPELVAVWKI QKLWI+DH GVYEAI GFDW QEV+GLL AFSDLYR+
Sbjct: 61  LWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIDGFDWSQEVRGLLAAFSDLYRK 120

Query: 121 RMFQLLVSAYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKL 180
           RMFQLLVSAYSTISIHD AHFLGMNEEEAKNYVT +GWIVDVAS+M TVKKQ+I  EQKL
Sbjct: 121 RMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKL 180

Query: 181 DSSKLQRLTEYVFHLEH 197
           DSSKLQRLTEY+FHLEH
Sbjct: 181 DSSKLQRLTEYIFHLEH 197

[Close]

BLAST of Csor.00g046810 vs. ExPASy TrEMBL
Match: A0A1S3BMN0 (COP9 signalosome complex subunit 8 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491316 PE=4 SV=1)

HSP 1 Score: 343 bits (881), Expect = 1.28e-118
Identity = 166/197 (84.26%), Postives = 179/197 (90.86%), Query Frame = 0


Query: 1   MDFARLTEALAFKSYEKIADICDDLMLQAAAEGVDYQDEWPYVIHFLGYLYVDDINSARF 60
           MDF RLTEALA KSY+KIADICDDLMLQAAAEG+ Y+DEWPY IHFLGY YVDDINSARF
Sbjct: 1   MDFGRLTEALASKSYDKIADICDDLMLQAAAEGIAYKDEWPYAIHFLGYFYVDDINSARF 60

Query: 61  FWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLLVAFSDLYRR 120
            WK+IPST+KE+RPELVAVWKI QKLW +DHRGVYEAIH  DWCQEVQGLL AFSDLYRR
Sbjct: 61  LWKAIPSTIKENRPELVAVWKIGQKLWTRDHRGVYEAIHELDWCQEVQGLLAAFSDLYRR 120

Query: 121 RMFQLLVSAYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKL 180
           RMFQLLVSAYSTIS+HD A  LGMNEEEAK YVT++GWIVD+AS+M TVKKQE+  EQKL
Sbjct: 121 RMFQLLVSAYSTISVHDTAQVLGMNEEEAKVYVTQQGWIVDLASQMFTVKKQEVVSEQKL 180

Query: 181 DSSKLQRLTEYVFHLEH 197
           DSSKLQRLTEYVFHLEH
Sbjct: 181 DSSKLQRLTEYVFHLEH 197

[Close]

BLAST of Csor.00g046810 vs. TAIR 10
Match: AT4G14110.1 (COP9 signalosome, subunit CSN8 )

HSP 1 Score: 284.3 bits (726), Expect = 7.6e-77
Identity = 130/197 (65.99%), Postives = 157/197 (79.70%), Query Frame = 0


Query: 1   MDFARLTEALAFKSYEKIADICDDLMLQAAAEGVDYQDEWPYVIHFLGYLYVDDINSARF 60
           MD + + EALA KS++KIADICD LMLQ A+EG++Y D+WPY IH LGY YVDD +SARF
Sbjct: 1   MDLSPVKEALAAKSFDKIADICDTLMLQVASEGIEYHDDWPYAIHLLGYFYVDDCDSARF 60

Query: 61  FWKSIPSTMKEHRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGLLVAFSDLYRR 120
            WK IP+ +KE +PE+VA W I QKLW  D+ GVYEAI G+DW QE + ++ AFSDLY +
Sbjct: 61  LWKRIPTAIKERKPEVVAAWGIGQKLWTHDYAGVYEAIRGYDWSQEAKDMVAAFSDLYTK 120

Query: 121 RMFQLLVSAYSTISIHDAAHFLGMNEEEAKNYVTRRGWIVDVASEMLTVKKQEIGREQKL 180
           RMFQLL+SAYSTI+IHD A FLGM E++A  YV   GW VD AS+M +VKKQ + REQK+
Sbjct: 121 RMFQLLLSAYSTITIHDLALFLGMTEDDATTYVVENGWTVDAASQMASVKKQAVKREQKV 180

Query: 181 DSSKLQRLTEYVFHLEH 198
           DSSKLQRLTEYVFHLEH
Sbjct: 181 DSSKLQRLTEYVFHLEH 197

The following BLAST results are available for this feature:

BLAST of Csor.00g046810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P43255	1.1e-75	65.99	COP9 signalosome complex subunit 8 OS=Arabidopsis thaliana OX=3702 GN=CSN8 PE=1 ...	[more]
Q6GQA6	1.7e-25	33.51	COP9 signalosome complex subunit 8 OS=Xenopus laevis OX=8355 GN=csn8 PE=2 SV=2	[more]
Q6P637	1.7e-25	33.51	COP9 signalosome complex subunit 8 OS=Xenopus tropicalis OX=8364 GN=csn8 PE=2 SV...	[more]
Q7ZUZ0	4.7e-23	35.33	COP9 signalosome complex subunit 8 OS=Danio rerio OX=7955 GN=cops8 PE=2 SV=1	[more]
Q8VBV7	3.1e-22	31.86	COP9 signalosome complex subunit 8 OS=Mus musculus OX=10090 GN=Cops8 PE=1 SV=1	[more]

BLAST of Csor.00g046810 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571729.1	3.58e-141	100.00	COP9 signalosome complex subunit 8, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_023553641.1	2.83e-138	98.48	COP9 signalosome complex subunit 8-like [Cucurbita pepo subsp. pepo]	[more]
XP_022963990.1	4.69e-137	97.46	COP9 signalosome complex subunit 8-like [Cucurbita moschata]	[more]
XP_022967528.1	7.79e-136	95.94	COP9 signalosome complex subunit 8-like [Cucurbita maxima]	[more]
XP_023531250.1	5.82e-122	87.31	COP9 signalosome complex subunit 8-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g046810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HJJ3	2.27e-137	97.46	COP9 signalosome complex subunit 8-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1HVB2	3.77e-136	95.94	COP9 signalosome complex subunit 8-like OS=Cucurbita maxima OX=3661 GN=LOC111467...	[more]
A0A6J1JQ49	1.63e-121	86.80	COP9 signalosome complex subunit 8-like OS=Cucurbita maxima OX=3661 GN=LOC111486...	[more]
A0A6J1EJA8	5.45e-120	85.28	COP9 signalosome complex subunit 8-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A1S3BMN0	1.28e-118	84.26	COP9 signalosome complex subunit 8 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]

BLAST of Csor.00g046810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14110.1	7.6e-77	65.99	COP9 signalosome, subunit CSN8	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.25.40.990		coord: 37..170 e-value: 1.1E-7 score: 33.4
None	No IPR available	PANTHER	PTHR13339:SF1	BNAA08G07630D PROTEIN	coord: 1..197
IPR033464	CSN8/PSMD8/EIF3K	PFAM	PF10075	CSN8_PSD8_EIF3K	coord: 39..174 e-value: 1.6E-30 score: 106.0
IPR033205	COP9 signalosome, subunit CSN8	PANTHER	PTHR13339	COP9 SIGNALOSOME COMPLEX SUBUNIT 8	coord: 1..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g046810.m01	Csor.00g046810.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010387	COP9 signalosome assembly
biological_process	GO:0000338	protein deneddylation
biological_process	GO:0009753	response to jasmonic acid
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0008180	COP9 signalosome
cellular_component	GO:0005737	cytoplasm