Csor.00g046060 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g046060
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	WUSCHEL-related homeobox 1-like
Location	Csor_Chr18: 366807 .. 367783 (-)
RNA-Seq Expression	Csor.00g046060
Synteny	Csor.00g046060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGATGATGGGTTACAATGACGGCGGAGATTTGAACTTTTCTTCCGATTCATTCAATGCCCGGAAACTTCGACCGCTCATTCCTCGCCCTCTCTCTTCTCCCTCCACCAACGATTTCTTCTCTCAATTTTATCAAATGGGTACTTACAAAATCTCTCCTTTTTTTCATTACTTTCCTTCAAATCCGTTCATATTCACCGGATTTTAATGTTCTGTAGGGACTGATCAGAGCAAGAGAGAGTTGAATAATGCACCACCGCCGCCGGTCGTCGTAAGCTCGCGGTGGAATCCGACGCCGGAGCAGTTGAGATTACTGGAGGAATTGTACCGCCGGGGGACTCGAACACCATCCGCCGACCAGATTCAACATATCACCGCTCAGCTCCGCCGTTTTGGGAAGATCGAAGGGAAGAACGTGTTCTATTGGTTTCAGAATCACAAAGCTAGAGAGCGGCAGAAACGCCGCCGTCAGATGGAATCTTCCGACCAGTCGATTTGCGACATTGAAATCCTCGAACGGAAAGATTCAGGTAACAAAAAAATCCGACCATTTGAAATGTTTTTTTGTTCATGATTTTGTGAAATTTAAGCGATAAAATAGGAAGAAAATTGATGTGTTTGAACCCGTGACATAGATTTTTGTCGCGAAGAGGCACAAATTTTGTCTTTGGGAGTTGTTCTAAACATTCTATTTGTTTGTTGATATGTAAAGTCGTATTCTTTTTGTCTTACTTTTTGTCAACAGGGTCGGGTAGGACAGTCTATGAAGTTGAACACACCAAGAACTGGCCTACCTCTACAAACTGCCGTACACTTGTGGAGGTTTCTATTTTCTTTCTCTCACTTTTTTTTTTCTGTGTTCTAATAAAAACCCCATTTTTACAACAAATCATGCTTTATCGTTTCGTTTAGCGTAAGTTTTCGTGGCTTTACGCTTACTTACATGTTCTCGATCTTCATTTCTCTCTTAATTAG

mRNA sequence

ATGTGGATGATGGGTTACAATGACGGCGGAGATTTGAACTTTTCTTCCGATTCATTCAATGCCCGGAAACTTCGACCGCTCATTCCTCGCCCTCTCTCTTCTCCCTCCACCAACGATTTCTTCTCTCAATTTTATCAAATGGGGACTGATCAGAGCAAGAGAGAGTTGAATAATGCACCACCGCCGCCGGTCGTCGTAAGCTCGCGGTGGAATCCGACGCCGGAGCAGTTGAGATTACTGGAGGAATTGTACCGCCGGGGGACTCGAACACCATCCGCCGACCAGATTCAACATATCACCGCTCAGCTCCGCCGTTTTGGGAAGATCGAAGGGAAGAACGTGTTCTATTGGTTTCAGAATCACAAAGCTAGAGAGCGGCAGAAACGCCGCCGTCAGATGGAATCTTCCGACCAGTCGATTTGCGACATTGAAATCCTCGAACGGAAAGATTCAGGGTCGGGTAGGACAGTCTATGAAGTTGAACACACCAAGAACTGGCCTACCTCTACAAACTGCCGTACACTTGTGGAGCGTAAGTTTTCGTGGCTTTACGCTTACTTACATGTTCTCGATCTTCATTTCTCTCTTAATTAG

Coding sequence (CDS)

ATGTGGATGATGGGTTACAATGACGGCGGAGATTTGAACTTTTCTTCCGATTCATTCAATGCCCGGAAACTTCGACCGCTCATTCCTCGCCCTCTCTCTTCTCCCTCCACCAACGATTTCTTCTCTCAATTTTATCAAATGGGGACTGATCAGAGCAAGAGAGAGTTGAATAATGCACCACCGCCGCCGGTCGTCGTAAGCTCGCGGTGGAATCCGACGCCGGAGCAGTTGAGATTACTGGAGGAATTGTACCGCCGGGGGACTCGAACACCATCCGCCGACCAGATTCAACATATCACCGCTCAGCTCCGCCGTTTTGGGAAGATCGAAGGGAAGAACGTGTTCTATTGGTTTCAGAATCACAAAGCTAGAGAGCGGCAGAAACGCCGCCGTCAGATGGAATCTTCCGACCAGTCGATTTGCGACATTGAAATCCTCGAACGGAAAGATTCAGGGTCGGGTAGGACAGTCTATGAAGTTGAACACACCAAGAACTGGCCTACCTCTACAAACTGCCGTACACTTGTGGAGCGTAAGTTTTCGTGGCTTTACGCTTACTTACATGTTCTCGATCTTCATTTCTCTCTTAATTAG

Protein sequence

MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNNAPPPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVERKFSWLYAYLHVLDLHFSLN

Homology

[Close]

BLAST of Csor.00g046060 vs. ExPASy Swiss-Prot
Match: Q6X7K0 (WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2)

HSP 1 Score: 190.3 bits (482), Expect = 2.1e-47
Identity = 113/197 (57.36%), Postives = 130/197 (65.99%), Query Frame = 0


Query: 1   MWMMGYNDGGDLNFSSDSFN-ARKLRPLIPRPLSSP-------STNDFFSQFYQMGTDQS 60
           MW MGYN+GG     +DSFN  RKLRPLIPR  S P       S + F      M  +Q+
Sbjct: 1   MWTMGYNEGG-----ADSFNGGRKLRPLIPRLTSCPTAAVNTNSDHRFNMAVVTMTAEQN 60

Query: 61  KRE---LNNAPP-PPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGK 120
           KRE   LN+ P  PPV+VSSRWNPTP+QLR+LEELYR+GTRTPSAD IQ ITAQLRR+GK
Sbjct: 61  KRELMMLNSEPQHPPVMVSSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGK 120

Query: 121 IEGKNVFYWFQNHKARERQKRRRQMES-------SDQSICDIEILERKDSGSGRTVYEVE 179
           IEGKNVFYWFQNHKARERQKRRRQME+       S  S+      ++KD       Y+VE
Sbjct: 121 IEGKNVFYWFQNHKARERQKRRRQMETGHEETVLSTASLVSNHGFDKKDPPG----YKVE 180

[Close]

BLAST of Csor.00g046060 vs. ExPASy Swiss-Prot
Match: Q6X7J9 (WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.2e-23
Identity = 63/132 (47.73%), Postives = 81/132 (61.36%), Query Frame = 0


Query: 15  SSDSFNARKLRPLIPRPLSSP------------STNDFFSQFYQMGTDQSKRELNNAPPP 74
           SS S + ++LRPL P+   SP            +T D  +      T  +K E    PP 
Sbjct: 21  SSLSLSCKRLRPLAPKLSGSPPSPPSSSSGVTSATFDLKNFIRPDQTGPTKFEHKRDPPH 80

Query: 75  PVVV---SSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQ 132
            +      +RWNPT EQ+ +LE LY+ G RTP+A QI+HIT QL ++GKIEGKNVFYWFQ
Sbjct: 81  QLETHPGGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQ 140

[Close]

BLAST of Csor.00g046060 vs. ExPASy Swiss-Prot
Match: Q9ZVF5 (WUSCHEL-related homeobox 6 OS=Arabidopsis thaliana OX=3702 GN=WOX6 PE=2 SV=2)

HSP 1 Score: 109.4 bits (272), Expect = 4.7e-23
Identity = 58/106 (54.72%), Postives = 73/106 (68.87%), Query Frame = 0


Query: 63  PVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQNHK 122
           P   + RWNPTPEQ+  LEELYR GTRTP+ +QIQ I ++LR++G+IEGKNVFYWFQNHK
Sbjct: 55  PAAATLRWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHK 114

Query: 123 ARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPT 169
           ARER KRRR+    +         + KDS SG   + V+ TK  P+
Sbjct: 115 ARERLKRRRR----EGGAIIKPHKDVKDSSSGG--HRVDQTKLCPS 154

[Close]

BLAST of Csor.00g046060 vs. ExPASy Swiss-Prot
Match: Q25AM2 (WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. indica OX=39946 GN=WOX4 PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.2e-21
Identity = 54/116 (46.55%), Postives = 77/116 (66.38%), Query Frame = 0


Query: 18  SFNARKLRPLIPRPLSSPSTNDFFS--QFYQMGTDQSKRELNNAPPPPVVVSSRWNPTPE 77
           +F+ + LRPL P+ +S P      +   F       + + LN     P   ++RWNP+ E
Sbjct: 40  AFSFKCLRPLAPK-ISLPEPRKMIAPPDFVVPRARNASKLLNYTVQVPAAGTTRWNPSAE 99

Query: 78  QLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRR 132
           Q+++LE LYR G RTP++ QI+ IT +L ++G+IEGKNVFYWFQNHKARERQK++R
Sbjct: 100 QIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQKQKR 154

[Close]

BLAST of Csor.00g046060 vs. ExPASy Swiss-Prot
Match: Q7XTV3 (WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX4 PE=2 SV=2)

HSP 1 Score: 104.8 bits (260), Expect = 1.2e-21
Identity = 54/116 (46.55%), Postives = 77/116 (66.38%), Query Frame = 0


Query: 18  SFNARKLRPLIPRPLSSPSTNDFFS--QFYQMGTDQSKRELNNAPPPPVVVSSRWNPTPE 77
           +F+ + LRPL P+ +S P      +   F       + + LN     P   ++RWNP+ E
Sbjct: 40  AFSFKCLRPLAPK-ISLPEPRKMIAPPDFVVPRARNASKLLNYTVQVPAAGTTRWNPSAE 99

Query: 78  QLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRR 132
           Q+++LE LYR G RTP++ QI+ IT +L ++G+IEGKNVFYWFQNHKARERQK++R
Sbjct: 100 QIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQKQKR 154

[Close]

BLAST of Csor.00g046060 vs. NCBI nr
Match: KAG6572967.1 (WUSCHEL-related homeobox 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 406 bits (1043), Expect = 5.30e-143
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNNAP 60
           MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNNAP
Sbjct: 1   MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNNAP 60

Query: 61  PPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQN 120
           PPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQN
Sbjct: 61  PPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQN 120

Query: 121 HKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVERKF 180
           HKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVERKF
Sbjct: 121 HKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVERKF 180

Query: 181 SWLYAYLHVLDLHFSLN 197
           SWLYAYLHVLDLHFSLN
Sbjct: 181 SWLYAYLHVLDLHFSLN 197

[Close]

BLAST of Csor.00g046060 vs. NCBI nr
Match: KAG7012148.1 (WUSCHEL-related homeobox 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 364 bits (934), Expect = 7.18e-125
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNNAP 60
           MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNNAP
Sbjct: 3   MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNNAP 62

Query: 61  PPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQN 120
           PPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQN
Sbjct: 63  PPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQN 122

Query: 121 HKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVE 177
           HKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVE
Sbjct: 123 HKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVE 179

[Close]

BLAST of Csor.00g046060 vs. NCBI nr
Match: XP_022994694.1 (WUSCHEL-related homeobox 1-like [Cucurbita maxima])

HSP 1 Score: 364 bits (934), Expect = 7.18e-125
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNNAP 60
           MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNNAP
Sbjct: 1   MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNNAP 60

Query: 61  PPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQN 120
           PPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQN
Sbjct: 61  PPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQN 120

Query: 121 HKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVE 177
           HKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVE
Sbjct: 121 HKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVE 177

[Close]

BLAST of Csor.00g046060 vs. NCBI nr
Match: XP_022955094.1 (WUSCHEL-related homeobox 1-like [Cucurbita moschata])

HSP 1 Score: 362 bits (930), Expect = 2.92e-124
Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNNAP 60
           MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNNAP
Sbjct: 3   MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNNAP 62

Query: 61  PPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQN 120
           PPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSA+QIQHITAQLRRFGKIEGKNVFYWFQN
Sbjct: 63  PPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQN 122

Query: 121 HKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVE 177
           HKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVE
Sbjct: 123 HKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVE 179

[Close]

BLAST of Csor.00g046060 vs. NCBI nr
Match: XP_023541174.1 (WUSCHEL-related homeobox 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 358 bits (920), Expect = 9.70e-123
Identity = 175/177 (98.87%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 1   MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNNAP 60
           MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQ  TDQSKRELNNAP
Sbjct: 3   MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQXRTDQSKRELNNAP 62

Query: 61  PPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQN 120
           PPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQN
Sbjct: 63  PPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQN 122

Query: 121 HKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVE 177
           HKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVE
Sbjct: 123 HKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVE 179

[Close]

BLAST of Csor.00g046060 vs. ExPASy TrEMBL
Match: A0A6J1K3K5 (WUSCHEL-related homeobox 1-like OS=Cucurbita maxima OX=3661 GN=LOC111490342 PE=3 SV=1)

HSP 1 Score: 364 bits (934), Expect = 3.47e-125
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNNAP 60
           MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNNAP
Sbjct: 1   MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNNAP 60

Query: 61  PPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQN 120
           PPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQN
Sbjct: 61  PPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQN 120

Query: 121 HKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVE 177
           HKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVE
Sbjct: 121 HKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVE 177

[Close]

BLAST of Csor.00g046060 vs. ExPASy TrEMBL
Match: A0A6J1GUZ2 (WUSCHEL-related homeobox 1-like OS=Cucurbita moschata OX=3662 GN=LOC111457162 PE=3 SV=1)

HSP 1 Score: 362 bits (930), Expect = 1.41e-124
Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNNAP 60
           MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNNAP
Sbjct: 3   MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNNAP 62

Query: 61  PPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQN 120
           PPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSA+QIQHITAQLRRFGKIEGKNVFYWFQN
Sbjct: 63  PPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQN 122

Query: 121 HKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVE 177
           HKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVE
Sbjct: 123 HKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCRTLVE 179

[Close]

BLAST of Csor.00g046060 vs. ExPASy TrEMBL
Match: A0A2H4MXZ4 (Mutant WOX1 transcription factor OS=Cucumis sativus OX=3659 PE=3 SV=1)

HSP 1 Score: 277 bits (709), Expect = 2.99e-91
Identity = 151/194 (77.84%), Postives = 160/194 (82.47%), Query Frame = 0


Query: 1   MWMMGYNDGGDLNFSSD-SFNARKLRPLIPRPLSSPS----TNDFFSQFYQMGT---DQS 60
           MWMMGYND  DLNF SD SFN+RKLRPLIPRPLSS S    TNDFFSQF+ M T   DQS
Sbjct: 1   MWMMGYNDAQDLNFPSDNSFNSRKLRPLIPRPLSSSSSSSHTNDFFSQFHHMATSVADQS 60

Query: 61  KRELNN----APPPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGK 120
           KRELNN    +  PPVVVSSRWNPTPEQLR+LEELYRRGTRTPSADQIQHIT+QLRR+GK
Sbjct: 61  KRELNNVLSPSSSPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITSQLRRYGK 120

Query: 121 IEGKNVFYWFQNHKARERQKRRRQMESS-----DQSICDIEILERKDSGSGRTVYEVEHT 177
           IEGKNVFYWFQNHKARERQKRRRQMESS     D S  D+++LERKDSGSGRTVYE E T
Sbjct: 121 IEGKNVFYWFQNHKARERQKRRRQMESSAITTADHSTRDLDVLERKDSGSGRTVYE-EQT 180

[Close]

BLAST of Csor.00g046060 vs. ExPASy TrEMBL
Match: A0A0A0LVV6 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042780 PE=3 SV=1)

HSP 1 Score: 277 bits (709), Expect = 9.76e-90
Identity = 151/194 (77.84%), Postives = 160/194 (82.47%), Query Frame = 0


Query: 1   MWMMGYNDGGDLNFSSD-SFNARKLRPLIPRPLSSPS----TNDFFSQFYQMGT---DQS 60
           MWMMGYND  DLNF SD SFN+RKLRPLIPRPLSS S    TNDFFSQF+ M T   DQS
Sbjct: 1   MWMMGYNDAQDLNFPSDNSFNSRKLRPLIPRPLSSSSSSSHTNDFFSQFHHMATSVADQS 60

Query: 61  KRELNN----APPPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGK 120
           KRELNN    +  PPVVVSSRWNPTPEQLR+LEELYRRGTRTPSADQIQHIT+QLRR+GK
Sbjct: 61  KRELNNVLSPSSSPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITSQLRRYGK 120

Query: 121 IEGKNVFYWFQNHKARERQKRRRQMESS-----DQSICDIEILERKDSGSGRTVYEVEHT 177
           IEGKNVFYWFQNHKARERQKRRRQMESS     D S  D+++LERKDSGSGRTVYE E T
Sbjct: 121 IEGKNVFYWFQNHKARERQKRRRQMESSAITTADHSTRDLDVLERKDSGSGRTVYE-EQT 180

[Close]

BLAST of Csor.00g046060 vs. ExPASy TrEMBL
Match: A0A1S4DS26 (WUSCHEL-related homeobox 1-like OS=Cucumis melo OX=3656 GN=LOC103501753 PE=3 SV=1)

HSP 1 Score: 277 bits (709), Expect = 1.04e-89
Identity = 151/194 (77.84%), Postives = 160/194 (82.47%), Query Frame = 0


Query: 1   MWMMGYNDGGDLNFSSD-SFNARKLRPLIPRPLSSPS----TNDFFSQFYQMGT---DQS 60
           MWMMGYND  DLNF SD SFN+RKLRPLIPRPLSS S    TNDFFSQF+ M T   DQS
Sbjct: 1   MWMMGYNDAQDLNFPSDNSFNSRKLRPLIPRPLSSSSSSSHTNDFFSQFHHMATSVADQS 60

Query: 61  KRELNN----APPPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGK 120
           KRELNN    +  PPVVVSSRWNPTPEQLR+LEELYRRGTRTPSADQIQHIT+QLRR+GK
Sbjct: 61  KRELNNVLSPSSSPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITSQLRRYGK 120

Query: 121 IEGKNVFYWFQNHKARERQKRRRQMESS-----DQSICDIEILERKDSGSGRTVYEVEHT 177
           IEGKNVFYWFQNHKARERQKRRRQMESS     D S  D+++LERKDSGSGRTVYE E T
Sbjct: 121 IEGKNVFYWFQNHKARERQKRRRQMESSAITTADHSARDLDVLERKDSGSGRTVYE-EQT 180

[Close]

BLAST of Csor.00g046060 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 )

HSP 1 Score: 190.3 bits (482), Expect = 1.5e-48
Identity = 113/197 (57.36%), Postives = 130/197 (65.99%), Query Frame = 0


Query: 1   MWMMGYNDGGDLNFSSDSFN-ARKLRPLIPRPLSSP-------STNDFFSQFYQMGTDQS 60
           MW MGYN+GG     +DSFN  RKLRPLIPR  S P       S + F      M  +Q+
Sbjct: 1   MWTMGYNEGG-----ADSFNGGRKLRPLIPRLTSCPTAAVNTNSDHRFNMAVVTMTAEQN 60

Query: 61  KRE---LNNAPP-PPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGK 120
           KRE   LN+ P  PPV+VSSRWNPTP+QLR+LEELYR+GTRTPSAD IQ ITAQLRR+GK
Sbjct: 61  KRELMMLNSEPQHPPVMVSSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGK 120

Query: 121 IEGKNVFYWFQNHKARERQKRRRQMES-------SDQSICDIEILERKDSGSGRTVYEVE 179
           IEGKNVFYWFQNHKARERQKRRRQME+       S  S+      ++KD       Y+VE
Sbjct: 121 IEGKNVFYWFQNHKARERQKRRRQMETGHEETVLSTASLVSNHGFDKKDPPG----YKVE 180

[Close]

BLAST of Csor.00g046060 vs. TAIR 10
Match: AT1G46480.1 (WUSCHEL related homeobox 4 )

HSP 1 Score: 111.3 bits (277), Expect = 8.9e-25
Identity = 63/132 (47.73%), Postives = 81/132 (61.36%), Query Frame = 0


Query: 15  SSDSFNARKLRPLIPRPLSSP------------STNDFFSQFYQMGTDQSKRELNNAPPP 74
           SS S + ++LRPL P+   SP            +T D  +      T  +K E    PP 
Sbjct: 21  SSLSLSCKRLRPLAPKLSGSPPSPPSSSSGVTSATFDLKNFIRPDQTGPTKFEHKRDPPH 80

Query: 75  PVVV---SSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQ 132
            +      +RWNPT EQ+ +LE LY+ G RTP+A QI+HIT QL ++GKIEGKNVFYWFQ
Sbjct: 81  QLETHPGGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQ 140

[Close]

BLAST of Csor.00g046060 vs. TAIR 10
Match: AT2G01500.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 109.4 bits (272), Expect = 3.4e-24
Identity = 58/106 (54.72%), Postives = 73/106 (68.87%), Query Frame = 0


Query: 63  PVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQNHK 122
           P   + RWNPTPEQ+  LEELYR GTRTP+ +QIQ I ++LR++G+IEGKNVFYWFQNHK
Sbjct: 55  PAAATLRWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHK 114

Query: 123 ARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPT 169
           ARER KRRR+    +         + KDS SG   + V+ TK  P+
Sbjct: 115 ARERLKRRRR----EGGAIIKPHKDVKDSSSGG--HRVDQTKLCPS 154

[Close]

BLAST of Csor.00g046060 vs. TAIR 10
Match: AT5G59340.1 (WUSCHEL related homeobox 2 )

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-22
Identity = 47/66 (71.21%), Postives = 57/66 (86.36%), Query Frame = 0


Query: 67  SSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQNHKARER 126
           SSRWNPT +Q+ LLE LY+ G RTPSADQIQ IT +LR +G IEGKNVFYWFQNHKAR+R
Sbjct: 12  SSRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQR 71

Query: 127 QKRRRQ 133
           QK++++
Sbjct: 72  QKQKQE 77

[Close]

BLAST of Csor.00g046060 vs. TAIR 10
Match: AT2G28610.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 102.8 bits (255), Expect = 3.2e-22
Identity = 48/69 (69.57%), Postives = 58/69 (84.06%), Query Frame = 0


Query: 65  VVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQNHKAR 124
           V S+RW PTPEQL +LEE+YR G RTP+A QIQ ITA L  +G+IEGKNVFYWFQNHKAR
Sbjct: 4   VASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKAR 63

Query: 125 ERQKRRRQM 134
           +RQK R+++
Sbjct: 64  DRQKLRKKL 72

The following BLAST results are available for this feature:

BLAST of Csor.00g046060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6X7K0	2.1e-47	57.36	WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2	[more]
Q6X7J9	1.2e-23	47.73	WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1	[more]
Q9ZVF5	4.7e-23	54.72	WUSCHEL-related homeobox 6 OS=Arabidopsis thaliana OX=3702 GN=WOX6 PE=2 SV=2	[more]
Q25AM2	1.2e-21	46.55	WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. indica OX=39946 GN=WOX4 PE=3 S...	[more]
Q7XTV3	1.2e-21	46.55	WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX4 PE=2...	[more]

BLAST of Csor.00g046060 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6572967.1	5.30e-143	100.00	WUSCHEL-related homeobox 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7012148.1	7.18e-125	100.00	WUSCHEL-related homeobox 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022994694.1	7.18e-125	100.00	WUSCHEL-related homeobox 1-like [Cucurbita maxima]	[more]
XP_022955094.1	2.92e-124	99.44	WUSCHEL-related homeobox 1-like [Cucurbita moschata]	[more]
XP_023541174.1	9.70e-123	98.87	WUSCHEL-related homeobox 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g046060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K3K5	3.47e-125	100.00	WUSCHEL-related homeobox 1-like OS=Cucurbita maxima OX=3661 GN=LOC111490342 PE=3...	[more]
A0A6J1GUZ2	1.41e-124	99.44	WUSCHEL-related homeobox 1-like OS=Cucurbita moschata OX=3662 GN=LOC111457162 PE...	[more]
A0A2H4MXZ4	2.99e-91	77.84	Mutant WOX1 transcription factor OS=Cucumis sativus OX=3659 PE=3 SV=1	[more]
A0A0A0LVV6	9.76e-90	77.84	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042780 PE...	[more]
A0A1S4DS26	1.04e-89	77.84	WUSCHEL-related homeobox 1-like OS=Cucumis melo OX=3656 GN=LOC103501753 PE=3 SV=...	[more]

BLAST of Csor.00g046060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18010.1	1.5e-48	57.36	WUSCHEL related homeobox 1	[more]
AT1G46480.1	8.9e-25	47.73	WUSCHEL related homeobox 4	[more]
AT2G01500.1	3.4e-24	54.72	Homeodomain-like superfamily protein	[more]
AT5G59340.1	1.4e-22	71.21	WUSCHEL related homeobox 2	[more]
AT2G28610.1	3.2e-22	69.57	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 65..132 e-value: 1.9E-4 score: 30.8
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 68..127 e-value: 1.7E-19 score: 69.4
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 73..128 score: 10.948446
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 69..129 e-value: 3.27648E-6 score: 41.0749
None	No IPR available	GENE3D	1.10.10.60		coord: 66..128 e-value: 8.2E-10 score: 40.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..70
None	No IPR available	PANTHER	PTHR45940:SF27	BNAANNG11050D PROTEIN	coord: 1..179
IPR044555	Protein WUSCHEL-like	PANTHER	PTHR45940	WUSCHEL-RELATED HOMEOBOX 1-RELATED	coord: 1..179
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 67..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g046060.m01	Csor.00g046060.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0099402	plant organ development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity