Csor.00g046010 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g046010
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	DDE Tnp4 domain-containing protein
Location	Csor_Chr18: 397879 .. 398520 (+)
RNA-Seq Expression	Csor.00g046010
Synteny	Csor.00g046010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAATCCGGCGAACGATCTGTTCTCGACACCGTCTTCTCCGACGAATTCATTCATTTCCTCCTCCGATCTCGACACTGAGGTGCCCATCATCGCCTTCTCCCATTTTATGATTCTCTTATCCGTTTCTTTATTTTCGGATTTCAATTCTGTTTTGCAGTCTACAGGTTCCTTCTTCCATGACAGGAGCACCAGCTTGGGGACTTTAATGGGGGTGAGCTTCCCGGCGATTGCCTTCCGAGTCTCCTCCCAGAGCCGAGACCACCCCGCCGCTGCGGCGGCGACAGCTGACGTTTCCCGCAAGAGCAAAAAGCCAAAGAGAAAAACGACGACGGCGCCGGGGCTAGTCTCTGATCGGAAGCGGAAGTGGTGGCAGCTGTGCAGGGACGACGGTGTTAAACCGGCATCTCTGGGCGACTTTCTTGAGGTGGAACGGAGATTTGGGGATGGTGCTTTTTACGGCAATGCGGTGGATCTAGAAGGCGTGGTTACGGCGGATCAATGGAGGAGTGGCCGGAATTTGTTCGCCGACGGGAGAGTTCTTCCGCCTGCGCCAACGGAGGAAGAAGCATCGTCAGCCGCGGCTCTCTGCCGATTTTCATTATCGCTCACCGGAATTTGCAGCGGCGGTGCCGGCTAA

mRNA sequence

ATGTTGAATCCGGCGAACGATCTGTTCTCGACACCGTCTTCTCCGACGAATTCATTCATTTCCTCCTCCGATCTCGACACTGAGTCTACAGGTTCCTTCTTCCATGACAGGAGCACCAGCTTGGGGACTTTAATGGGGGTGAGCTTCCCGGCGATTGCCTTCCGAGTCTCCTCCCAGAGCCGAGACCACCCCGCCGCTGCGGCGGCGACAGCTGACGTTTCCCGCAAGAGCAAAAAGCCAAAGAGAAAAACGACGACGGCGCCGGGGCTAGTCTCTGATCGGAAGCGGAAGTGGTGGCAGCTGTGCAGGGACGACGGTGTTAAACCGGCATCTCTGGGCGACTTTCTTGAGGTGGAACGGAGATTTGGGGATGGTGCTTTTTACGGCAATGCGGTGGATCTAGAAGGCGTGGTTACGGCGGATCAATGGAGGAGTGGCCGGAATTTGTTCGCCGACGGGAGAGTTCTTCCGCCTGCGCCAACGGAGGAAGAAGCATCGTCAGCCGCGGCTCTCTGCCGATTTTCATTATCGCTCACCGGAATTTGCAGCGGCGGTGCCGGCTAA

Coding sequence (CDS)

ATGTTGAATCCGGCGAACGATCTGTTCTCGACACCGTCTTCTCCGACGAATTCATTCATTTCCTCCTCCGATCTCGACACTGAGTCTACAGGTTCCTTCTTCCATGACAGGAGCACCAGCTTGGGGACTTTAATGGGGGTGAGCTTCCCGGCGATTGCCTTCCGAGTCTCCTCCCAGAGCCGAGACCACCCCGCCGCTGCGGCGGCGACAGCTGACGTTTCCCGCAAGAGCAAAAAGCCAAAGAGAAAAACGACGACGGCGCCGGGGCTAGTCTCTGATCGGAAGCGGAAGTGGTGGCAGCTGTGCAGGGACGACGGTGTTAAACCGGCATCTCTGGGCGACTTTCTTGAGGTGGAACGGAGATTTGGGGATGGTGCTTTTTACGGCAATGCGGTGGATCTAGAAGGCGTGGTTACGGCGGATCAATGGAGGAGTGGCCGGAATTTGTTCGCCGACGGGAGAGTTCTTCCGCCTGCGCCAACGGAGGAAGAAGCATCGTCAGCCGCGGCTCTCTGCCGATTTTCATTATCGCTCACCGGAATTTGCAGCGGCGGTGCCGGCTAA

Protein sequence

MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQSRDHPAAAAATADVSRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVKPASLGDFLEVERRFGDGAFYGNAVDLEGVVTADQWRSGRNLFADGRVLPPAPTEEEASSAAALCRFSLSLTGICSGGAG

Homology

[Close]

BLAST of Csor.00g046010 vs. ExPASy Swiss-Prot
Match: Q6DR24 (Uncharacterized protein At3g17950 OS=Arabidopsis thaliana OX=3702 GN=Y-3 PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.7e-36
Identity = 105/205 (51.22%), Postives = 126/205 (61.46%), Query Frame = 0


Query: 12  PSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPA---IAFRVSSQSRDHPAAAA 71
           PSSPT S +SSSDLDTESTGSFFHDRS +LGTLMG SF A   + FR SS+    P+ A 
Sbjct: 7   PSSPTISSVSSSDLDTESTGSFFHDRSITLGTLMGFSFTATMPMPFRASSRRHVSPSVAI 66

Query: 72  ATADVS--RKSKKPKRKTTTAPGLVSDRKRKWWQLCRDD-------GV-------KPASL 131
           + A  S  R++ + KR  + +      R+RKWW+ CRDD       G+       K +SL
Sbjct: 67  SRASSSNARRNHQRKRPPSNSAEPEPHRRRKWWRFCRDDDDDAAGNGIHRGTGDSKRSSL 126

Query: 132 GDFLEVERRFGDGAFYGNA-VDLEGVVTA---DQW--RSGRNLFADGRVLPPAPTE---- 188
           G++LEVERRFGD A Y +A  +LE  V A   DQ      R LFADGRVLPPA  E    
Sbjct: 127 GEYLEVERRFGDEAVYNSAEAELEDAVVARYQDQQPVMGERALFADGRVLPPASAEVVTG 186

[Close]

BLAST of Csor.00g046010 vs. NCBI nr
Match: KAG6572972.1 (hypothetical protein SDJN03_26859, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 358 bits (920), Expect = 1.41e-124
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQS 60
           MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQS
Sbjct: 1   MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQS 60

Query: 61  RDHPAAAAATADVSRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVKPASLGDFLEVER 120
           RDHPAAAAATADVSRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVKPASLGDFLEVER
Sbjct: 61  RDHPAAAAATADVSRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVKPASLGDFLEVER 120

Query: 121 RFGDGAFYGNAVDLEGVVTADQWRSGRNLFADGRVLPPAPTEEEASSAAALCRFSLSLTG 180
           RFGDGAFYGNAVDLEGVVTADQWRSGRNLFADGRVLPPAPTEEEASSAAALCRFSLSLTG
Sbjct: 121 RFGDGAFYGNAVDLEGVVTADQWRSGRNLFADGRVLPPAPTEEEASSAAALCRFSLSLTG 180

Query: 181 ICSGGAG 187
           ICSGGAG
Sbjct: 181 ICSGGAG 187

[Close]

BLAST of Csor.00g046010 vs. NCBI nr
Match: XP_022954893.1 (uncharacterized protein At3g17950-like [Cucurbita moschata])

HSP 1 Score: 350 bits (898), Expect = 2.06e-120
Identity = 185/187 (98.93%), Postives = 185/187 (98.93%), Query Frame = 0


Query: 1   MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQS 60
           MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQS
Sbjct: 54  MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQS 113

Query: 61  RDHPAAAAATADVSRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVKPASLGDFLEVER 120
           RDHPAAAAATADVSRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVK ASLGDFLEVER
Sbjct: 114 RDHPAAAAATADVSRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVKSASLGDFLEVER 173

Query: 121 RFGDGAFYGNAVDLEGVVTADQWRSGRNLFADGRVLPPAPTEEEASSAAALCRFSLSLTG 180
           RFGDGAFYGNAVDLEGVVTADQ RSGRNLFADGRVLPPAPTEEEASSAAALCRFSLSLTG
Sbjct: 174 RFGDGAFYGNAVDLEGVVTADQRRSGRNLFADGRVLPPAPTEEEASSAAALCRFSLSLTG 233

Query: 181 ICSGGAG 187
           ICSGGAG
Sbjct: 234 ICSGGAG 240

[Close]

BLAST of Csor.00g046010 vs. NCBI nr
Match: XP_022994232.1 (uncharacterized protein At3g17950-like [Cucurbita maxima])

HSP 1 Score: 340 bits (871), Expect = 4.16e-117
Identity = 181/187 (96.79%), Postives = 182/187 (97.33%), Query Frame = 0


Query: 1   MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQS 60
           MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQS
Sbjct: 1   MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQS 60

Query: 61  RDHPAAAAATADVSRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVKPASLGDFLEVER 120
           R H AAAAATADVSRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVKPASLGDFLEVER
Sbjct: 61  RGHHAAAAATADVSRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVKPASLGDFLEVER 120

Query: 121 RFGDGAFYGNAVDLEGVVTADQWRSGRNLFADGRVLPPAPTEEEASSAAALCRFSLSLTG 180
           RFGDGAFYGNAVDLEGVVTADQ RSGRNLFADGRVLPPAPTEEEAS+ AAL RFSLSLTG
Sbjct: 121 RFGDGAFYGNAVDLEGVVTADQRRSGRNLFADGRVLPPAPTEEEASAGAALRRFSLSLTG 180

Query: 181 ICSGGAG 187
           ICSGGAG
Sbjct: 181 ICSGGAG 187

[Close]

BLAST of Csor.00g046010 vs. NCBI nr
Match: XP_023542436.1 (uncharacterized protein At3g17950-like [Cucurbita pepo subsp. pepo] >XP_023542437.1 uncharacterized protein At3g17950-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327 bits (838), Expect = 4.62e-112
Identity = 181/190 (95.26%), Postives = 181/190 (95.26%), Query Frame = 0


Query: 1   MLNPANDLFSTPS---SPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVS 60
           MLNPANDLFSTPS   SPTNSFISS DLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVS
Sbjct: 1   MLNPANDLFSTPSTPSSPTNSFISS-DLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVS 60

Query: 61  SQSRDHPAAAAATADVSRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVKPASLGDFLE 120
           SQSRDH AAAAATADVSRKSKKPKRKTT APGLVSDRKRKWWQLCRDDGVKPASLGDFLE
Sbjct: 61  SQSRDHHAAAAATADVSRKSKKPKRKTT-APGLVSDRKRKWWQLCRDDGVKPASLGDFLE 120

Query: 121 VERRFGDGAFYGNAVDLEGVVTADQWRSGRNLFADGRVLPPAPTEEEASSAAALCRFSLS 180
           VERRFGD AFY NAVDLEGVVTADQ RSGRNLFADGRVLPPAPTEEEASSAAALCRFSLS
Sbjct: 121 VERRFGDAAFYDNAVDLEGVVTADQRRSGRNLFADGRVLPPAPTEEEASSAAALCRFSLS 180

Query: 181 LTGICSGGAG 187
           LTGICSGGAG
Sbjct: 181 LTGICSGGAG 188

[Close]

BLAST of Csor.00g046010 vs. NCBI nr
Match: XP_022924210.1 (uncharacterized protein At3g17950 [Cucurbita moschata] >XP_022924211.1 uncharacterized protein At3g17950 [Cucurbita moschata])

HSP 1 Score: 296 bits (757), Expect = 1.02e-99
Identity = 157/188 (83.51%), Postives = 169/188 (89.89%), Query Frame = 0


Query: 1   MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQS 60
           MLNPANDL   PSSPTNS ISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAI FRV SQ+
Sbjct: 1   MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 60

Query: 61  RD-HPAAAAATADVSRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVKPASLGDFLEVE 120
           RD H AA AA    SRKSKKPKRKTT AP LV+DRKR+WW+LCRDDGVKPASLG+FLEVE
Sbjct: 61  RDQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 120

Query: 121 RRFGDGAFYGNAVDLEGVVTADQWRSGRNLFADGRVLPPAPTEEEASSAAALCRFSLSLT 180
           RRFGDGAF+GNAVDLEGVV+ADQ R+GR+LFADGRVLPPA TEE+ S+A ALCRFS+SLT
Sbjct: 121 RRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLT 180

Query: 181 GICSGGAG 187
           GICSGGAG
Sbjct: 181 GICSGGAG 188

[Close]

BLAST of Csor.00g046010 vs. ExPASy TrEMBL
Match: A0A6J1GSD5 (uncharacterized protein At3g17950-like OS=Cucurbita moschata OX=3662 GN=LOC111457017 PE=4 SV=1)

HSP 1 Score: 350 bits (898), Expect = 9.97e-121
Identity = 185/187 (98.93%), Postives = 185/187 (98.93%), Query Frame = 0


Query: 1   MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQS 60
           MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQS
Sbjct: 54  MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQS 113

Query: 61  RDHPAAAAATADVSRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVKPASLGDFLEVER 120
           RDHPAAAAATADVSRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVK ASLGDFLEVER
Sbjct: 114 RDHPAAAAATADVSRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVKSASLGDFLEVER 173

Query: 121 RFGDGAFYGNAVDLEGVVTADQWRSGRNLFADGRVLPPAPTEEEASSAAALCRFSLSLTG 180
           RFGDGAFYGNAVDLEGVVTADQ RSGRNLFADGRVLPPAPTEEEASSAAALCRFSLSLTG
Sbjct: 174 RFGDGAFYGNAVDLEGVVTADQRRSGRNLFADGRVLPPAPTEEEASSAAALCRFSLSLTG 233

Query: 181 ICSGGAG 187
           ICSGGAG
Sbjct: 234 ICSGGAG 240

[Close]

BLAST of Csor.00g046010 vs. ExPASy TrEMBL
Match: A0A6J1JV77 (uncharacterized protein At3g17950-like OS=Cucurbita maxima OX=3661 GN=LOC111490032 PE=4 SV=1)

HSP 1 Score: 340 bits (871), Expect = 2.02e-117
Identity = 181/187 (96.79%), Postives = 182/187 (97.33%), Query Frame = 0


Query: 1   MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQS 60
           MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQS
Sbjct: 1   MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQS 60

Query: 61  RDHPAAAAATADVSRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVKPASLGDFLEVER 120
           R H AAAAATADVSRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVKPASLGDFLEVER
Sbjct: 61  RGHHAAAAATADVSRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVKPASLGDFLEVER 120

Query: 121 RFGDGAFYGNAVDLEGVVTADQWRSGRNLFADGRVLPPAPTEEEASSAAALCRFSLSLTG 180
           RFGDGAFYGNAVDLEGVVTADQ RSGRNLFADGRVLPPAPTEEEAS+ AAL RFSLSLTG
Sbjct: 121 RFGDGAFYGNAVDLEGVVTADQRRSGRNLFADGRVLPPAPTEEEASAGAALRRFSLSLTG 180

Query: 181 ICSGGAG 187
           ICSGGAG
Sbjct: 181 ICSGGAG 187

[Close]

BLAST of Csor.00g046010 vs. ExPASy TrEMBL
Match: A0A6J1E8Y2 (uncharacterized protein At3g17950 OS=Cucurbita moschata OX=3662 GN=LOC111431726 PE=4 SV=1)

HSP 1 Score: 296 bits (757), Expect = 4.93e-100
Identity = 157/188 (83.51%), Postives = 169/188 (89.89%), Query Frame = 0


Query: 1   MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQS 60
           MLNPANDL   PSSPTNS ISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAI FRV SQ+
Sbjct: 1   MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 60

Query: 61  RD-HPAAAAATADVSRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVKPASLGDFLEVE 120
           RD H AA AA    SRKSKKPKRKTT AP LV+DRKR+WW+LCRDDGVKPASLG+FLEVE
Sbjct: 61  RDQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 120

Query: 121 RRFGDGAFYGNAVDLEGVVTADQWRSGRNLFADGRVLPPAPTEEEASSAAALCRFSLSLT 180
           RRFGDGAF+GNAVDLEGVV+ADQ R+GR+LFADGRVLPPA TEE+ S+A ALCRFS+SLT
Sbjct: 121 RRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLT 180

Query: 181 GICSGGAG 187
           GICSGGAG
Sbjct: 181 GICSGGAG 188

[Close]

BLAST of Csor.00g046010 vs. ExPASy TrEMBL
Match: A0A1S4DUB1 (uncharacterized protein At3g17950 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503240 PE=4 SV=1)

HSP 1 Score: 293 bits (750), Expect = 5.74e-99
Identity = 157/188 (83.51%), Postives = 167/188 (88.83%), Query Frame = 0


Query: 1   MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQS 60
           MLNPANDL   PSSPTNS ISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAI FRV SQ+
Sbjct: 1   MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 60

Query: 61  RDHPAAAAATADV-SRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVKPASLGDFLEVE 120
           RD   AA  TA   SRKSKK KRKTTTAP LV+DRKR+WW+LCRDDGVKPASLG+FLEVE
Sbjct: 61  RDQHTAATVTAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 120

Query: 121 RRFGDGAFYGNAVDLEGVVTADQWRSGRNLFADGRVLPPAPTEEEASSAAALCRFSLSLT 180
           RRFGDGAFYGNAVDLEGVVTADQ R+GR+LFADGRVLPPA TEE+ S+  ALCRFS+SLT
Sbjct: 121 RRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRFSVSLT 180

Query: 181 GICSGGAG 187
           GICSGGAG
Sbjct: 181 GICSGGAG 188

[Close]

BLAST of Csor.00g046010 vs. ExPASy TrEMBL
Match: A0A1S3CPP8 (uncharacterized protein At3g17950 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503240 PE=4 SV=1)

HSP 1 Score: 293 bits (750), Expect = 8.68e-99
Identity = 157/188 (83.51%), Postives = 167/188 (88.83%), Query Frame = 0


Query: 1   MLNPANDLFSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQS 60
           MLNPANDL   PSSPTNS ISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAI FRV SQ+
Sbjct: 13  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 72

Query: 61  RDHPAAAAATADV-SRKSKKPKRKTTTAPGLVSDRKRKWWQLCRDDGVKPASLGDFLEVE 120
           RD   AA  TA   SRKSKK KRKTTTAP LV+DRKR+WW+LCRDDGVKPASLG+FLEVE
Sbjct: 73  RDQHTAATVTAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 132

Query: 121 RRFGDGAFYGNAVDLEGVVTADQWRSGRNLFADGRVLPPAPTEEEASSAAALCRFSLSLT 180
           RRFGDGAFYGNAVDLEGVVTADQ R+GR+LFADGRVLPPA TEE+ S+  ALCRFS+SLT
Sbjct: 133 RRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRFSVSLT 192

Query: 181 GICSGGAG 187
           GICSGGAG
Sbjct: 193 GICSGGAG 200

[Close]

BLAST of Csor.00g046010 vs. TAIR 10
Match: AT3G17950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 153.3 bits (386), Expect = 1.9e-37
Identity = 105/205 (51.22%), Postives = 126/205 (61.46%), Query Frame = 0


Query: 12  PSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPA---IAFRVSSQSRDHPAAAA 71
           PSSPT S +SSSDLDTESTGSFFHDRS +LGTLMG SF A   + FR SS+    P+ A 
Sbjct: 7   PSSPTISSVSSSDLDTESTGSFFHDRSITLGTLMGFSFTATMPMPFRASSRRHVSPSVAI 66

Query: 72  ATADVS--RKSKKPKRKTTTAPGLVSDRKRKWWQLCRDD-------GV-------KPASL 131
           + A  S  R++ + KR  + +      R+RKWW+ CRDD       G+       K +SL
Sbjct: 67  SRASSSNARRNHQRKRPPSNSAEPEPHRRRKWWRFCRDDDDDAAGNGIHRGTGDSKRSSL 126

Query: 132 GDFLEVERRFGDGAFYGNA-VDLEGVVTA---DQW--RSGRNLFADGRVLPPAPTE---- 188
           G++LEVERRFGD A Y +A  +LE  V A   DQ      R LFADGRVLPPA  E    
Sbjct: 127 GEYLEVERRFGDEAVYNSAEAELEDAVVARYQDQQPVMGERALFADGRVLPPASAEVVTG 186

[Close]

BLAST of Csor.00g046010 vs. TAIR 10
Match: AT3G17950.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 103.6 bits (257), Expect = 1.8e-22
Identity = 77/172 (44.77%), Postives = 96/172 (55.81%), Query Frame = 0


Query: 45  MGVSFPA---IAFRVSSQSRDHPAAAAATADVS--RKSKKPKRKTTTAPGLVSDRKRKWW 104
           MG SF A   + FR SS+    P+ A + A  S  R++ + KR  + +      R+RKWW
Sbjct: 1   MGFSFTATMPMPFRASSRRHVSPSVAISRASSSNARRNHQRKRPPSNSAEPEPHRRRKWW 60

Query: 105 QLCRDD-------GV-------KPASLGDFLEVERRFGDGAFYGNA-VDLEGVVTA---D 164
           + CRDD       G+       K +SLG++LEVERRFGD A Y +A  +LE  V A   D
Sbjct: 61  RFCRDDDDDAAGNGIHRGTGDSKRSSLGEYLEVERRFGDEAVYNSAEAELEDAVVARYQD 120

Query: 165 QW--RSGRNLFADGRVLPPAPTE----EEASSAAALCRFSLSLTGICSGGAG 188
           Q      R LFADGRVLPPA  E    E    A +LCRF +SLTGICSGG G
Sbjct: 121 QQPVMGERALFADGRVLPPASAEVVTGEGTPVATSLCRFPVSLTGICSGGGG 172

[Close]

BLAST of Csor.00g046010 vs. TAIR 10
Match: AT5G02440.1 (unknown protein; Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 1.3e-04
Identity = 29/60 (48.33%), Postives = 40/60 (66.67%), Query Frame = 0


Query: 9   FSTPSSPTNSFISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAIAFRVSSQSRDHPAAAA 68
           FS+  SP+ S  SSSDLD++S GSFF DRS +LG L+G+S      R S+++R+    AA
Sbjct: 42  FSSLLSPSPSSQSSSDLDSQSMGSFFRDRSYTLGNLIGISSFLELSRRSNRTRNDQTGAA 101

The following BLAST results are available for this feature:

BLAST of Csor.00g046010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DR24	2.7e-36	51.22	Uncharacterized protein At3g17950 OS=Arabidopsis thaliana OX=3702 GN=Y-3 PE=1 SV...	[more]

BLAST of Csor.00g046010 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6572972.1	1.41e-124	100.00	hypothetical protein SDJN03_26859, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022954893.1	2.06e-120	98.93	uncharacterized protein At3g17950-like [Cucurbita moschata]	[more]
XP_022994232.1	4.16e-117	96.79	uncharacterized protein At3g17950-like [Cucurbita maxima]	[more]
XP_023542436.1	4.62e-112	95.26	uncharacterized protein At3g17950-like [Cucurbita pepo subsp. pepo] >XP_02354243...	[more]
XP_022924210.1	1.02e-99	83.51	uncharacterized protein At3g17950 [Cucurbita moschata] >XP_022924211.1 uncharact...	[more]

BLAST of Csor.00g046010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GSD5	9.97e-121	98.93	uncharacterized protein At3g17950-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1JV77	2.02e-117	96.79	uncharacterized protein At3g17950-like OS=Cucurbita maxima OX=3661 GN=LOC1114900...	[more]
A0A6J1E8Y2	4.93e-100	83.51	uncharacterized protein At3g17950 OS=Cucurbita moschata OX=3662 GN=LOC111431726 ...	[more]
A0A1S4DUB1	5.74e-99	83.51	uncharacterized protein At3g17950 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10350...	[more]
A0A1S3CPP8	8.68e-99	83.51	uncharacterized protein At3g17950 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10350...	[more]

BLAST of Csor.00g046010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17950.1	1.9e-37	51.22	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G17950.2	1.8e-22	44.77	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G02440.1	1.3e-04	48.33	unknown protein; Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..89
None	No IPR available	PANTHER	PTHR33544:SF15	BNAANNG11020D PROTEIN	coord: 1..187
IPR040344	Uncharacterized protein At3g17950-like	PANTHER	PTHR33544	FAMILY NOT NAMED	coord: 1..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g046010.m01	Csor.00g046010.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding