Csor.00g045210 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g045210
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	transcription factor bHLH168-like
Location	Csor_Chr18: 882147 .. 883190 (-)
RNA-Seq Expression	Csor.00g045210
Synteny	Csor.00g045210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATCGCTGTGTTCTAAGCTCTTTAATCTTGTTCCTTCCTCCCATTACAAAATTTCTAAGGTTTTTTTCGTACCCAAATCTTGAACAATTGATATCAATTCATGTTCAATTGATATCAATTCATGTTCTAAGTGTAATTATTGTTTGTTCTTCACAGGATTTGCTATCCCAACAGACCCAAATCTCATACGTGATTGCTTACATAAAAGAGCTGAAAGAAAGAGTGGAGAGTTTGGAGAAAAGGAAGGAAGCTTTACAATTACAAATTCATTCTCAATTGCCAACTTCTAGTGATTCTACATTTTCTATAGTTGAGGTGAGAGAATTGTGTAGTGGGATCGTTCACGTAACGTTGATTAGCAGTGTCGATCGAAACGTCATGCTTAATAAAATCATTGGTGTCGTTGAAGAGGAAGGTGGTGAAGTTGTGAGTGCTAGCTTCTCCACGCTCGGTGATAAGGTCTTTCATTCCCTCCATATCGAAGTAAGTCGTGTTAGGAATAATGAACCTAGAGATGTCAACGAGACGGGAAACTTCCCTATCCCTATCTCTGCCTCCTATTTCATTTCTCATTTTCAGATCTCACGTTAGTTGGAGAGGGGAACGAAACATTTCTTATAAGAGTGTGAAATCTTTCCCTACTAGACATTTTTTAAAATCGTGAGATTAATGACGATACGTAACGGGTCAAAGTGGACAACATGGCTGTTACATCTATCTTCTATCTCAATTCTCATATTATCTTTGTTTTTTTTTTCCAAAAGACCTCGTATCAATAAACATAGTATTTCTTACTTATATACTCACGATCTTCTTTCTTAATTAGTCAATGTGAAACTCTAATAAGTAATAAAAAAAAACCCGTCTTACTGAAACTCGATACGAGTTACGAGCTACAGTAAACTAAGCTTAATCTGTTTAATCGTATTCTTCTTACTTTGCAGGCTAAAATTTCTAGGGTTGGAATAGAGACGTCGAGAGTAGAAAAAAGATTGAAGCATTTGATAATCGAAGCTCGAGAAGATGGACGAGATAAGTAA

mRNA sequence

ATGAAATCGCTGTGTTCTAAGCTCTTTAATCTTGTTCCTTCCTCCCATTACAAAATTTCTAAGGATTTGCTATCCCAACAGACCCAAATCTCATACGTGATTGCTTACATAAAAGAGCTGAAAGAAAGAGTGGAGAGTTTGGAGAAAAGGAAGGAAGCTTTACAATTACAAATTCATTCTCAATTGCCAACTTCTAGTGATTCTACATTTTCTATAGTTGAGGTGAGAGAATTGTGTAGTGGGATCGTTCACGTAACGTTGATTAGCAGTGTCGATCGAAACGTCATGCTTAATAAAATCATTGGTGTCGTTGAAGAGGAAGGTGGTGAAGTTGTGAGTGCTAGCTTCTCCACGCTCGGTGATAAGGTCTTTCATTCCCTCCATATCGAAGCTAAAATTTCTAGGGTTGGAATAGAGACGTCGAGAGTAGAAAAAAGATTGAAGCATTTGATAATCGAAGCTCGAGAAGATGGACGAGATAAGTAA

Coding sequence (CDS)

ATGAAATCGCTGTGTTCTAAGCTCTTTAATCTTGTTCCTTCCTCCCATTACAAAATTTCTAAGGATTTGCTATCCCAACAGACCCAAATCTCATACGTGATTGCTTACATAAAAGAGCTGAAAGAAAGAGTGGAGAGTTTGGAGAAAAGGAAGGAAGCTTTACAATTACAAATTCATTCTCAATTGCCAACTTCTAGTGATTCTACATTTTCTATAGTTGAGGTGAGAGAATTGTGTAGTGGGATCGTTCACGTAACGTTGATTAGCAGTGTCGATCGAAACGTCATGCTTAATAAAATCATTGGTGTCGTTGAAGAGGAAGGTGGTGAAGTTGTGAGTGCTAGCTTCTCCACGCTCGGTGATAAGGTCTTTCATTCCCTCCATATCGAAGCTAAAATTTCTAGGGTTGGAATAGAGACGTCGAGAGTAGAAAAAAGATTGAAGCATTTGATAATCGAAGCTCGAGAAGATGGACGAGATAAGTAA

Protein sequence

MKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSDSTFSIVEVRELCSGIVHVTLISSVDRNVMLNKIIGVVEEEGGEVVSASFSTLGDKVFHSLHIEAKISRVGIETSRVEKRLKHLIIEAREDGRDK

Homology

[Close]

BLAST of Csor.00g045210 vs. ExPASy Swiss-Prot
Match: Q9XIJ1 (Transcription factor bHLH168 OS=Arabidopsis thaliana OX=3702 GN=BHLH168 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.9e-10
Identity = 48/145 (33.10%), Postives = 87/145 (60.00%), Query Frame = 0


Query: 8   LFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSD 67
           LF+++ SSH   ++ L   Q  I   ++Y+ +LKE+V  L + K  + L    +  +   
Sbjct: 33  LFSIL-SSHVSPTRRLPVPQL-IDQAVSYMIQLKEKVNYLNEMKRRM-LGGEVKNRSEGS 92

Query: 68  STFSIVEVRELCSGIVHVTLISSVD-RNVMLNKIIGVVEEEGGEVVSASFSTLGDKVFHS 127
           S    + +R L S I+ + L+  ++ + VML+K++ V EEEG +V+SA+   L D+ F++
Sbjct: 93  SLLPKLSIRSLDS-IIEMNLVMDLNMKGVMLHKLVSVFEEEGAQVMSANLQNLNDRTFYT 152

Query: 128 LHIEAKISRVGIETSRVEKRLKHLI 152
           +  +A I R+GI+ SR+E+RL+ +I
Sbjct: 153 IIAQAIICRIGIDPSRIEERLRDII 173

[Close]

BLAST of Csor.00g045210 vs. ExPASy Swiss-Prot
Match: F4I4E1 (Transcription factor bHLH167 OS=Arabidopsis thaliana OX=3702 GN=BHLH167 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.7e-08
Identity = 43/146 (29.45%), Postives = 84/146 (57.53%), Query Frame = 0


Query: 8   LFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSD 67
           LF+++ SSH   ++ L      I    +Y+ +LKE V  L+++K  L   +  +L    +
Sbjct: 33  LFSIL-SSHVSPTRKLPVPHL-IDQATSYMIQLKENVNYLKEKKRTL---LQGELGNLYE 92

Query: 68  STFSI--VEVRELCSGIVHVTLISSVDRNVMLNKIIGVVEEEGGEVVSASFSTLGDKVFH 127
            +F +  + +R   S I    ++    + VML++++ + EEEG +V+SA+   L D+  +
Sbjct: 93  GSFLLPKLSIRSRDSTIEMNLIMDLNMKRVMLHELVSIFEEEGAQVMSANLQNLNDRTTY 152

Query: 128 SLHIEAKISRVGIETSRVEKRLKHLI 152
           ++  +A ISR+GI+ SR+E+R++ +I
Sbjct: 153 TIIAQAIISRIGIDPSRIEERVRKII 173

[Close]

BLAST of Csor.00g045210 vs. ExPASy Swiss-Prot
Match: Q0JFZ0 (Protein IRON-RELATED TRANSCRIPTION FACTOR 2 OS=Oryza sativa subsp. japonica OX=39947 GN=IRO2 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.3e-05
Identity = 48/168 (28.57%), Postives = 87/168 (51.79%), Query Frame = 0


Query: 1   MKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEAL------ 60
           +  L S L  L+P + +      LS  T +S V+ YI EL+++VE+LE++K+ L      
Sbjct: 84  LNELYSSLRALLPDADH----TKLSIPTTVSRVLKYIPELQKQVENLERKKKELTTTSTT 143

Query: 61  ---------QLQIHSQLPTSSDSTFSIVEVRELCSGIVHVTLISSVDRNVM-LNKIIGVV 120
                    QL      P  S +  + +E+      +V V+L+S+V  +V+ L+K I V+
Sbjct: 144 NCKPGVLGSQLMSEGMAPIVSATCINDMEI------MVQVSLLSNVAGSVLPLSKCIKVL 203

Query: 121 EEEGGEVVSASFST-LGDKVFHSLHIEAKISRVGIETSRVEKRLKHLI 152
           E EG   +S+S S+  G++ F+S+H++     +  E     +RL+ ++
Sbjct: 204 ENEGLHFISSSTSSGFGNRTFYSIHLQRSEGTINEECPAFCERLEKVV 241

[Close]

BLAST of Csor.00g045210 vs. ExPASy Swiss-Prot
Match: A2WZ60 (Protein IRON-RELATED TRANSCRIPTION FACTOR 2 OS=Oryza sativa subsp. indica OX=39946 GN=IRO2 PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.6e-05
Identity = 48/168 (28.57%), Postives = 87/168 (51.79%), Query Frame = 0


Query: 1   MKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEAL------ 60
           +  L S L  L+P + +      LS  T +S V+ YI EL+++VE+LE++K+ L      
Sbjct: 84  LNELYSSLRALLPDADH---TKKLSIPTTVSRVLKYIPELQKQVENLERKKKELTTTSTT 143

Query: 61  ---------QLQIHSQLPTSSDSTFSIVEVRELCSGIVHVTLISSVDRNVM-LNKIIGVV 120
                    QL      P  S +  + +E+      +V V+L+S+V  +V+ L+K I V+
Sbjct: 144 NCKPGVLGSQLMSEGMAPIVSATCINDMEI------MVQVSLLSNVAGSVLPLSKCIKVL 203

Query: 121 EEEGGEVVSASFST-LGDKVFHSLHIEAKISRVGIETSRVEKRLKHLI 152
           E EG   +S+S S+  G++ F+S+H++     +  E     +RL+ ++
Sbjct: 204 ENEGLHFISSSTSSGFGNRTFYSIHLQRSEGTINEECPAFCERLEKVV 242

[Close]

BLAST of Csor.00g045210 vs. ExPASy Swiss-Prot
Match: Q9ZVB5 (Transcription factor bHLH100 OS=Arabidopsis thaliana OX=3702 GN=BHLH100 PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 5.3e-04
Identity = 39/128 (30.47%), Postives = 61/128 (47.66%), Query Frame = 0


Query: 24  LSQQTQISYVIAYIKELKERVESLEKRKEALQLQI-----------HSQLPTSSDSTFSI 83
           LS    +S  + YI EL+E+V+ L K+KE L  QI           +S+      S  S 
Sbjct: 97  LSVSATVSQALKYIPELQEQVKKLMKKKEELSFQISGQRDLVYTDQNSKSEEGVTSYAST 156

Query: 84  VEVRELCSGIVHVTLISSVDRNVMLNKIIGVVEEEGGEVVSASFS-TLGDKVFHSLHIEA 140
           V    L    V V + S          ++  VEE+G  +V AS S + G+++F+S+H++ 
Sbjct: 157 VSSTRLSETEVMVQISSLQTEKCSFGNVLSGVEEDGLVLVGASSSRSHGERLFYSMHLQI 216

[Close]

BLAST of Csor.00g045210 vs. NCBI nr
Match: KAG6573052.1 (Transcription factor basic helix-loop-helix 168, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 300 bits (767), Expect = 4.20e-102
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHS 60
           MKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHS
Sbjct: 1   MKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHS 60

Query: 61  QLPTSSDSTFSIVEVRELCSGIVHVTLISSVDRNVMLNKIIGVVEEEGGEVVSASFSTLG 120
           QLPTSSDSTFSIVEVRELCSGIVHVTLISSVDRNVMLNKIIGVVEEEGGEVVSASFSTLG
Sbjct: 61  QLPTSSDSTFSIVEVRELCSGIVHVTLISSVDRNVMLNKIIGVVEEEGGEVVSASFSTLG 120

Query: 121 DKVFHSLHIEAKISRVGIETSRVEKRLKHLIIEAREDGRDK 161
           DKVFHSLHIEAKISRVGIETSRVEKRLKHLIIEAREDGRDK
Sbjct: 121 DKVFHSLHIEAKISRVGIETSRVEKRLKHLIIEAREDGRDK 161

[Close]

BLAST of Csor.00g045210 vs. NCBI nr
Match: XP_022954432.1 (transcription factor bHLH168-like [Cucurbita moschata])

HSP 1 Score: 296 bits (758), Expect = 2.43e-100
Identity = 159/161 (98.76%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 1   MKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHS 60
           MKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHS
Sbjct: 27  MKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHS 86

Query: 61  QLPTSSDSTFSIVEVRELCSGIVHVTLISSVDRNVMLNKIIGVVEEEGGEVVSASFSTLG 120
           QLPTSSDSTF IVEVRELCSGIVHVTLISSVDRNVMLN+IIGVVEEEGGEVVSASFSTLG
Sbjct: 87  QLPTSSDSTFPIVEVRELCSGIVHVTLISSVDRNVMLNEIIGVVEEEGGEVVSASFSTLG 146

Query: 121 DKVFHSLHIEAKISRVGIETSRVEKRLKHLIIEAREDGRDK 161
           DKVFHSLHIEAKISRVGIETSRVEKRLKHLIIEAREDGRDK
Sbjct: 147 DKVFHSLHIEAKISRVGIETSRVEKRLKHLIIEAREDGRDK 187

[Close]

BLAST of Csor.00g045210 vs. NCBI nr
Match: XP_023542199.1 (transcription factor bHLH168-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 291 bits (745), Expect = 2.33e-98
Identity = 156/161 (96.89%), Postives = 158/161 (98.14%), Query Frame = 0


Query: 1   MKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHS 60
           MKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYI ELKERVESLEK+KEALQLQIHS
Sbjct: 27  MKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYINELKERVESLEKKKEALQLQIHS 86

Query: 61  QLPTSSDSTFSIVEVRELCSGIVHVTLISSVDRNVMLNKIIGVVEEEGGEVVSASFSTLG 120
           QLPTSSDSTF IVEVRELCSGIVHVTLISSVDRNVMLN+IIGVVEEEGGEVVSASFSTLG
Sbjct: 87  QLPTSSDSTFPIVEVRELCSGIVHVTLISSVDRNVMLNEIIGVVEEEGGEVVSASFSTLG 146

Query: 121 DKVFHSLHIEAKISRVGIETSRVEKRLKHLIIEAREDGRDK 161
           DKVFHSLHIEAKI RVGIETSRVEKRLKHLIIEAREDGRDK
Sbjct: 147 DKVFHSLHIEAKIPRVGIETSRVEKRLKHLIIEAREDGRDK 187

[Close]

BLAST of Csor.00g045210 vs. NCBI nr
Match: XP_022994121.1 (transcription factor bHLH168-like [Cucurbita maxima])

HSP 1 Score: 275 bits (704), Expect = 2.10e-91
Identity = 147/161 (91.30%), Postives = 156/161 (96.89%), Query Frame = 0


Query: 1   MKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHS 60
           MKSLCSKLF+LVPSSHYKISKDLLSQQTQISYVIAYI ELKERVESLEKRKEALQLQIHS
Sbjct: 56  MKSLCSKLFDLVPSSHYKISKDLLSQQTQISYVIAYINELKERVESLEKRKEALQLQIHS 115

Query: 61  QLPTSSDSTFSIVEVRELCSGIVHVTLISSVDRNVMLNKIIGVVEEEGGEVVSASFSTLG 120
           QL TS+DSTF IVEV+ELCSGIVHVTLISSV RNVMLN+II V+EEEGGEVVSASFSTLG
Sbjct: 116 QLSTSNDSTFPIVEVKELCSGIVHVTLISSVHRNVMLNEIIVVIEEEGGEVVSASFSTLG 175

Query: 121 DKVFHSLHIEAKISRVGIETSRVEKRLKHLIIEAREDGRDK 161
           DK+FHSLHIEAKISRVGIETSR+EKRL++LIIEAREDGRDK
Sbjct: 176 DKIFHSLHIEAKISRVGIETSRIEKRLENLIIEAREDGRDK 216

[Close]

BLAST of Csor.00g045210 vs. NCBI nr
Match: KAG7012240.1 (Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 248 bits (633), Expect = 1.41e-81
Identity = 140/161 (86.96%), Postives = 141/161 (87.58%), Query Frame = 0


Query: 1   MKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHS 60
           MKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHS
Sbjct: 27  MKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHS 86

Query: 61  QLPTSSDSTFSIVEVRELCSGIVHVTLISSVDRNVMLNKIIGVVEEEGGEVVSASFSTLG 120
           QLPTSSDSTF IVEVRELCSGIVHVTLISSVDRNVMLN+IIGVVEEEGGEV         
Sbjct: 87  QLPTSSDSTFPIVEVRELCSGIVHVTLISSVDRNVMLNEIIGVVEEEGGEV--------- 146

Query: 121 DKVFHSLHIEAKISRVGIETSRVEKRLKHLIIEAREDGRDK 161
                     AKISRVGIETSRVEKRLKHLIIEAREDGRDK
Sbjct: 147 ----------AKISRVGIETSRVEKRLKHLIIEAREDGRDK 168

[Close]

BLAST of Csor.00g045210 vs. ExPASy TrEMBL
Match: A0A6J1GQZ4 (transcription factor bHLH168-like OS=Cucurbita moschata OX=3662 GN=LOC111456691 PE=4 SV=1)

HSP 1 Score: 296 bits (758), Expect = 1.18e-100
Identity = 159/161 (98.76%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 1   MKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHS 60
           MKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHS
Sbjct: 27  MKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHS 86

Query: 61  QLPTSSDSTFSIVEVRELCSGIVHVTLISSVDRNVMLNKIIGVVEEEGGEVVSASFSTLG 120
           QLPTSSDSTF IVEVRELCSGIVHVTLISSVDRNVMLN+IIGVVEEEGGEVVSASFSTLG
Sbjct: 87  QLPTSSDSTFPIVEVRELCSGIVHVTLISSVDRNVMLNEIIGVVEEEGGEVVSASFSTLG 146

Query: 121 DKVFHSLHIEAKISRVGIETSRVEKRLKHLIIEAREDGRDK 161
           DKVFHSLHIEAKISRVGIETSRVEKRLKHLIIEAREDGRDK
Sbjct: 147 DKVFHSLHIEAKISRVGIETSRVEKRLKHLIIEAREDGRDK 187

[Close]

BLAST of Csor.00g045210 vs. ExPASy TrEMBL
Match: A0A6J1JY79 (transcription factor bHLH168-like OS=Cucurbita maxima OX=3661 GN=LOC111489950 PE=4 SV=1)

HSP 1 Score: 275 bits (704), Expect = 1.02e-91
Identity = 147/161 (91.30%), Postives = 156/161 (96.89%), Query Frame = 0


Query: 1   MKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHS 60
           MKSLCSKLF+LVPSSHYKISKDLLSQQTQISYVIAYI ELKERVESLEKRKEALQLQIHS
Sbjct: 56  MKSLCSKLFDLVPSSHYKISKDLLSQQTQISYVIAYINELKERVESLEKRKEALQLQIHS 115

Query: 61  QLPTSSDSTFSIVEVRELCSGIVHVTLISSVDRNVMLNKIIGVVEEEGGEVVSASFSTLG 120
           QL TS+DSTF IVEV+ELCSGIVHVTLISSV RNVMLN+II V+EEEGGEVVSASFSTLG
Sbjct: 116 QLSTSNDSTFPIVEVKELCSGIVHVTLISSVHRNVMLNEIIVVIEEEGGEVVSASFSTLG 175

Query: 121 DKVFHSLHIEAKISRVGIETSRVEKRLKHLIIEAREDGRDK 161
           DK+FHSLHIEAKISRVGIETSR+EKRL++LIIEAREDGRDK
Sbjct: 176 DKIFHSLHIEAKISRVGIETSRIEKRLENLIIEAREDGRDK 216

[Close]

BLAST of Csor.00g045210 vs. ExPASy TrEMBL
Match: A0A1S3AW43 (uncharacterized protein LOC103483440 OS=Cucumis melo OX=3656 GN=LOC103483440 PE=4 SV=1)

HSP 1 Score: 192 bits (487), Expect = 2.30e-59
Identity = 101/158 (63.92%), Postives = 130/158 (82.28%), Query Frame = 0


Query: 1   MKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQ--- 60
           MKSLCS LFNLVP SH+KI K+L+SQQ QI +VIAYI ELKERVE+LEKRK+AL+LQ   
Sbjct: 30  MKSLCSNLFNLVPPSHFKIPKELISQQNQICHVIAYINELKERVENLEKRKQALRLQTHS 89

Query: 61  --IHSQLPTSSDSTFSIVEVRELCSGIVHVTLISSVDRNVMLNKIIGVVEEEGGEVVSAS 120
             IH Q   ++D T  I+E+ +L + IVH+ LISSV+R+ ML++II V+EEEGG+VV+A 
Sbjct: 90  SHIHDQANNNNDVTLPIIEINDLGNDIVHIMLISSVNRSFMLHQIISVIEEEGGQVVNAG 149

Query: 121 FSTLGDKVFHSLHIEAKISRVGIETSRVEKRLKHLIIE 153
            ST+G+KVFHSLHIEAKISR+GIETSRV++RL +L+ +
Sbjct: 150 LSTIGNKVFHSLHIEAKISRIGIETSRVKRRLVNLVYQ 187

[Close]

BLAST of Csor.00g045210 vs. ExPASy TrEMBL
Match: A0A218VZD6 (transcription factor bHLH162-like isoform X2 OS=Punica granatum OX=22663 GN=LOC116212722 PE=4 SV=1)

HSP 1 Score: 143 bits (360), Expect = 3.33e-40
Identity = 77/159 (48.43%), Postives = 109/159 (68.55%), Query Frame = 0


Query: 1   MKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHS 60
           MK LC KL +L+P  HYK SKD+LSQQ Q+ +  AYIK+L++R++ L++RKE   +    
Sbjct: 24  MKGLCFKLASLIPPQHYKTSKDMLSQQDQLDFAAAYIKQLRDRIDGLKRRKELAMISNGL 83

Query: 61  QLPTSSDST---------FSIVEVRELCSGIVHVTLISSVDRNVMLNKIIGVVEEEGGEV 120
               +  S            ++E+RE  SG+  V+LIS VD+N ML ++I ++ EEG EV
Sbjct: 84  NCSGNGGSPNPMANVGVKLPVIELREWESGL-EVSLISGVDKNFMLYEVISILHEEGAEV 143

Query: 121 VSASFSTLGDKVFHSLHIEAKISRVGIETSRVEKRLKHL 150
           VSASFST+GDK+FH+LH + +ISRVGIETSR+ +RL+ L
Sbjct: 144 VSASFSTIGDKIFHTLHAQVRISRVGIETSRIWERLQEL 181

[Close]

BLAST of Csor.00g045210 vs. ExPASy TrEMBL
Match: A0A5J5BG63 (BHLH domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_024795 PE=4 SV=1)

HSP 1 Score: 141 bits (355), Expect = 2.26e-39
Identity = 80/156 (51.28%), Postives = 109/156 (69.87%), Query Frame = 0


Query: 1   MKSLCSKLFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHS 60
           MK LC KL +L+P  H+K SKDLLSQQ Q++   +YIK+LKE++E L+ RKE     I+ 
Sbjct: 24  MKGLCFKLTSLIPPHHFKPSKDLLSQQDQLNQAASYIKQLKEKIEELKVRKEVAIRNING 83

Query: 61  QL-----PTSSDSTFSIVEVRELCSGIVHVTLISSVDRNVMLNKIIGVVEEEGGEVVSAS 120
                  PT +     +VE+R+L S  V V LIS + +N ML +II V+EEEG EVVSAS
Sbjct: 84  TSNNIIDPTMTGLRLPLVELRDLGSS-VEVLLISGLKKNFMLYEIISVLEEEGAEVVSAS 143

Query: 121 FSTLGDKVFHSLHIEAKISRVGIETSRVEKRLKHLI 151
           FST+GD+VFH+LH + K+SRVG++TS + +RL+ LI
Sbjct: 144 FSTVGDQVFHTLHAQVKVSRVGVDTSSIYQRLQELI 178

[Close]

BLAST of Csor.00g045210 vs. TAIR 10
Match: AT1G10586.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.0e-11
Identity = 48/145 (33.10%), Postives = 87/145 (60.00%), Query Frame = 0


Query: 8   LFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSD 67
           LF+++ SSH   ++ L   Q  I   ++Y+ +LKE+V  L + K  + L    +  +   
Sbjct: 33  LFSIL-SSHVSPTRRLPVPQL-IDQAVSYMIQLKEKVNYLNEMKRRM-LGGEVKNRSEGS 92

Query: 68  STFSIVEVRELCSGIVHVTLISSVD-RNVMLNKIIGVVEEEGGEVVSASFSTLGDKVFHS 127
           S    + +R L S I+ + L+  ++ + VML+K++ V EEEG +V+SA+   L D+ F++
Sbjct: 93  SLLPKLSIRSLDS-IIEMNLVMDLNMKGVMLHKLVSVFEEEGAQVMSANLQNLNDRTFYT 152

Query: 128 LHIEAKISRVGIETSRVEKRLKHLI 152
           +  +A I R+GI+ SR+E+RL+ +I
Sbjct: 153 IIAQAIICRIGIDPSRIEERLRDII 173

[Close]

BLAST of Csor.00g045210 vs. TAIR 10
Match: AT1G10586.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 4.6e-11
Identity = 43/130 (33.08%), Postives = 77/130 (59.23%), Query Frame = 0


Query: 23  LLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSDSTFSIVEVRELCSGI 82
           LL     I   ++Y+ +LKE+V  L + K  + L    +  +   S    + +R L S I
Sbjct: 5   LLPVPQLIDQAVSYMIQLKEKVNYLNEMKRRM-LGGEVKNRSEGSSLLPKLSIRSLDS-I 64

Query: 83  VHVTLISSVD-RNVMLNKIIGVVEEEGGEVVSASFSTLGDKVFHSLHIEAKISRVGIETS 142
           + + L+  ++ + VML+K++ V EEEG +V+SA+   L D+ F+++  +A I R+GI+ S
Sbjct: 65  IEMNLVMDLNMKGVMLHKLVSVFEEEGAQVMSANLQNLNDRTFYTIIAQAIICRIGIDPS 124

Query: 143 RVEKRLKHLI 152
           R+E+RL+ +I
Sbjct: 125 RIEERLRDII 132

[Close]

BLAST of Csor.00g045210 vs. TAIR 10
Match: AT1G10585.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 1.9e-09
Identity = 43/146 (29.45%), Postives = 84/146 (57.53%), Query Frame = 0


Query: 8   LFNLVPSSHYKISKDLLSQQTQISYVIAYIKELKERVESLEKRKEALQLQIHSQLPTSSD 67
           LF+++ SSH   ++ L      I    +Y+ +LKE V  L+++K  L   +  +L    +
Sbjct: 33  LFSIL-SSHVSPTRKLPVPHL-IDQATSYMIQLKENVNYLKEKKRTL---LQGELGNLYE 92

Query: 68  STFSI--VEVRELCSGIVHVTLISSVDRNVMLNKIIGVVEEEGGEVVSASFSTLGDKVFH 127
            +F +  + +R   S I    ++    + VML++++ + EEEG +V+SA+   L D+  +
Sbjct: 93  GSFLLPKLSIRSRDSTIEMNLIMDLNMKRVMLHELVSIFEEEGAQVMSANLQNLNDRTTY 152

Query: 128 SLHIEAKISRVGIETSRVEKRLKHLI 152
           ++  +A ISR+GI+ SR+E+R++ +I
Sbjct: 153 TIIAQAIISRIGIDPSRIEERVRKII 173

[Close]

BLAST of Csor.00g045210 vs. TAIR 10
Match: AT2G41240.1 (basic helix-loop-helix protein 100 )

HSP 1 Score: 45.8 bits (107), Expect = 3.7e-05
Identity = 39/128 (30.47%), Postives = 61/128 (47.66%), Query Frame = 0


Query: 24  LSQQTQISYVIAYIKELKERVESLEKRKEALQLQI-----------HSQLPTSSDSTFSI 83
           LS    +S  + YI EL+E+V+ L K+KE L  QI           +S+      S  S 
Sbjct: 97  LSVSATVSQALKYIPELQEQVKKLMKKKEELSFQISGQRDLVYTDQNSKSEEGVTSYAST 156

Query: 84  VEVRELCSGIVHVTLISSVDRNVMLNKIIGVVEEEGGEVVSASFS-TLGDKVFHSLHIEA 140
           V    L    V V + S          ++  VEE+G  +V AS S + G+++F+S+H++ 
Sbjct: 157 VSSTRLSETEVMVQISSLQTEKCSFGNVLSGVEEDGLVLVGASSSRSHGERLFYSMHLQI 216

[Close]

BLAST of Csor.00g045210 vs. TAIR 10
Match: AT2G41240.2 (basic helix-loop-helix protein 100 )

HSP 1 Score: 45.8 bits (107), Expect = 3.7e-05
Identity = 39/128 (30.47%), Postives = 61/128 (47.66%), Query Frame = 0


Query: 24  LSQQTQISYVIAYIKELKERVESLEKRKEALQLQI-----------HSQLPTSSDSTFSI 83
           LS    +S  + YI EL+E+V+ L K+KE L  QI           +S+      S  S 
Sbjct: 96  LSVSATVSQALKYIPELQEQVKKLMKKKEELSFQISGQRDLVYTDQNSKSEEGVTSYAST 155

Query: 84  VEVRELCSGIVHVTLISSVDRNVMLNKIIGVVEEEGGEVVSASFS-TLGDKVFHSLHIEA 140
           V    L    V V + S          ++  VEE+G  +V AS S + G+++F+S+H++ 
Sbjct: 156 VSSTRLSETEVMVQISSLQTEKCSFGNVLSGVEEDGLVLVGASSSRSHGERLFYSMHLQI 215

The following BLAST results are available for this feature:

BLAST of Csor.00g045210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XIJ1	2.9e-10	33.10	Transcription factor bHLH168 OS=Arabidopsis thaliana OX=3702 GN=BHLH168 PE=3 SV=...	[more]
F4I4E1	2.7e-08	29.45	Transcription factor bHLH167 OS=Arabidopsis thaliana OX=3702 GN=BHLH167 PE=2 SV=...	[more]
Q0JFZ0	1.3e-05	28.57	Protein IRON-RELATED TRANSCRIPTION FACTOR 2 OS=Oryza sativa subsp. japonica OX=3...	[more]
A2WZ60	1.6e-05	28.57	Protein IRON-RELATED TRANSCRIPTION FACTOR 2 OS=Oryza sativa subsp. indica OX=399...	[more]
Q9ZVB5	5.3e-04	30.47	Transcription factor bHLH100 OS=Arabidopsis thaliana OX=3702 GN=BHLH100 PE=1 SV=...	[more]

BLAST of Csor.00g045210 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6573052.1	4.20e-102	100.00	Transcription factor basic helix-loop-helix 168, partial [Cucurbita argyrosperma...	[more]
XP_022954432.1	2.43e-100	98.76	transcription factor bHLH168-like [Cucurbita moschata]	[more]
XP_023542199.1	2.33e-98	96.89	transcription factor bHLH168-like [Cucurbita pepo subsp. pepo]	[more]
XP_022994121.1	2.10e-91	91.30	transcription factor bHLH168-like [Cucurbita maxima]	[more]
KAG7012240.1	1.41e-81	86.96	Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Csor.00g045210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GQZ4	1.18e-100	98.76	transcription factor bHLH168-like OS=Cucurbita moschata OX=3662 GN=LOC111456691 ...	[more]
A0A6J1JY79	1.02e-91	91.30	transcription factor bHLH168-like OS=Cucurbita maxima OX=3661 GN=LOC111489950 PE...	[more]
A0A1S3AW43	2.30e-59	63.92	uncharacterized protein LOC103483440 OS=Cucumis melo OX=3656 GN=LOC103483440 PE=...	[more]
A0A218VZD6	3.33e-40	48.43	transcription factor bHLH162-like isoform X2 OS=Punica granatum OX=22663 GN=LOC1...	[more]
A0A5J5BG63	2.26e-39	51.28	BHLH domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_024795 PE=4 ...	[more]

BLAST of Csor.00g045210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10586.1	2.0e-11	33.10	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G10586.2	4.6e-11	33.08	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G10585.1	1.9e-09	29.45	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G41240.1	3.7e-05	30.47	basic helix-loop-helix protein 100	[more]
AT2G41240.2	3.7e-05	30.47	basic helix-loop-helix protein 100	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 37..57
None	No IPR available	PANTHER	PTHR13935:SF52	OS01G0108400 PROTEIN	coord: 68..150 coord: 1..61
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 68..150 coord: 1..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g045210.m01	Csor.00g045210.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:2000112	regulation of cellular macromolecule biosynthetic process
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0090575	RNA polymerase II transcription regulator complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity