Csor.00g042530 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g042530
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr07: 6233522 .. 6234067 (+)
RNA-Seq ExpressionCsor.00g042530
SyntenyCsor.00g042530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAGCCCCAAACTCGAGAAACTTTCGCCCAAAATCCATCACTCTCAATTCTCTCCCGCTCCTCTTTCGTTGCCGCCGATTCAGATCCCGCCGATCATCCTCTAGCACCACCTGCCGTAGCCGTTACCGTCACAGCCGCCTCCGATTCCAGTGATGTTGCTATCGAGGATCCCGATTTGCTTCGAGAACCTAAACGCCGAAAGCACTGTCCGACGGCGCTCGAGAATCTGGACGAATTGACGTCAGCGTCGAACTCCAGCTTCGCCTTCACTTTCGACACCAAATTCTGCGGGTTCTCCGCGGAGATCACTCCGAAATTCGGATCATTCAACTCGATCGCACACGAAACCGAGACGAAGAAGAAGAAGAAGAAAGAACAGAGATCGGTTCTCGATTTGGCGAGTGGAGTAAGAGGAGACGAAGAAGAGGAGAAATTAGATTCCGTACAGCGCGAACAAGATGAACAAGAAATCAAAGTCACCGATGCGTTGCTAGAAGCAATTGGAGAAGGAAGAGAAGGTCTGGAATCTGTGGCGGATTGA

mRNA sequence

ATGGCAGAGCCCCAAACTCGAGAAACTTTCGCCCAAAATCCATCACTCTCAATTCTCTCCCGCTCCTCTTTCGTTGCCGCCGATTCAGATCCCGCCGATCATCCTCTAGCACCACCTGCCGTAGCCGTTACCGTCACAGCCGCCTCCGATTCCAGTGATGTTGCTATCGAGGATCCCGATTTGCTTCGAGAACCTAAACGCCGAAAGCACTGTCCGACGGCGCTCGAGAATCTGGACGAATTGACGTCAGCGTCGAACTCCAGCTTCGCCTTCACTTTCGACACCAAATTCTGCGGGTTCTCCGCGGAGATCACTCCGAAATTCGGATCATTCAACTCGATCGCACACGAAACCGAGACGAAGAAGAAGAAGAAGAAAGAACAGAGATCGGTTCTCGATTTGGCGAGTGGAGTAAGAGGAGACGAAGAAGAGGAGAAATTAGATTCCGTACAGCGCGAACAAGATGAACAAGAAATCAAAGTCACCGATGCGTTGCTAGAAGCAATTGGAGAAGGAAGAGAAGGTCTGGAATCTGTGGCGGATTGA

Coding sequence (CDS)

ATGGCAGAGCCCCAAACTCGAGAAACTTTCGCCCAAAATCCATCACTCTCAATTCTCTCCCGCTCCTCTTTCGTTGCCGCCGATTCAGATCCCGCCGATCATCCTCTAGCACCACCTGCCGTAGCCGTTACCGTCACAGCCGCCTCCGATTCCAGTGATGTTGCTATCGAGGATCCCGATTTGCTTCGAGAACCTAAACGCCGAAAGCACTGTCCGACGGCGCTCGAGAATCTGGACGAATTGACGTCAGCGTCGAACTCCAGCTTCGCCTTCACTTTCGACACCAAATTCTGCGGGTTCTCCGCGGAGATCACTCCGAAATTCGGATCATTCAACTCGATCGCACACGAAACCGAGACGAAGAAGAAGAAGAAGAAAGAACAGAGATCGGTTCTCGATTTGGCGAGTGGAGTAAGAGGAGACGAAGAAGAGGAGAAATTAGATTCCGTACAGCGCGAACAAGATGAACAAGAAATCAAAGTCACCGATGCGTTGCTAGAAGCAATTGGAGAAGGAAGAGAAGGTCTGGAATCTGTGGCGGATTGA

Protein sequence

MAEPQTRETFAQNPSLSILSRSSFVAADSDPADHPLAPPAVAVTVTAASDSSDVAIEDPDLLREPKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAHETETKKKKKKEQRSVLDLASGVRGDEEEEKLDSVQREQDEQEIKVTDALLEAIGEGREGLESVAD
Homology
BLAST of Csor.00g042530 vs. NCBI nr
Match: KAG6595438.1 (hypothetical protein SDJN03_11991, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027436.1 hypothetical protein SDJN02_11449, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 338 bits (867), Expect = 1.08e-116
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0

Query: 1   MAEPQTRETFAQNPSLSILSRSSFVAADSDPADHPLAPPAVAVTVTAASDSSDVAIEDPD 60
           MAEPQTRETFAQNPSLSILSRSSFVAADSDPADHPLAPPAVAVTVTAASDSSDVAIEDPD
Sbjct: 1   MAEPQTRETFAQNPSLSILSRSSFVAADSDPADHPLAPPAVAVTVTAASDSSDVAIEDPD 60

Query: 61  LLREPKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAHETET 120
           LLREPKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAHETET
Sbjct: 61  LLREPKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAHETET 120

Query: 121 KKKKKKEQRSVLDLASGVRGDEEEEKLDSVQREQDEQEIKVTDALLEAIGEGREGLESVA 180
           KKKKKKEQRSVLDLASGVRGDEEEEKLDSVQREQDEQEIKVTDALLEAIGEGREGLESVA
Sbjct: 121 KKKKKKEQRSVLDLASGVRGDEEEEKLDSVQREQDEQEIKVTDALLEAIGEGREGLESVA 180

BLAST of Csor.00g042530 vs. NCBI nr
Match: KAG6604296.1 (hypothetical protein SDJN03_04905, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034454.1 hypothetical protein SDJN02_04183, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 224 bits (571), Expect = 1.40e-71
Identity = 134/189 (70.90%), Postives = 147/189 (77.78%), Query Frame = 0

Query: 1   MAEPQTRETFAQNPSLSILSRSSFVAADSDPADHPLAPPAVAVTVTAASDSSDVAIEDPD 60
           MAEPQTRE FAQNPSLS LSRSSF AAD DP +  L P  +AV+  AA+D SDV IEDPD
Sbjct: 1   MAEPQTRENFAQNPSLSPLSRSSFSAADPDPGERSLVPTTLAVS--AAADFSDVGIEDPD 60

Query: 61  LLREPKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAHETET 120
           L+REPKRRKHCP+ALENLDELTSASNSSF FTFDTKFCG SAEITPKFGSFNSI  E E+
Sbjct: 61  LIREPKRRKHCPSALENLDELTSASNSSFGFTFDTKFCGVSAEITPKFGSFNSIVSEMES 120

Query: 121 KKKKKKEQRSVLDLASGVRGDEEEEKLDSVQR--------EQDEQEIKVTDALLEAIGEG 180
            KK+KKEQR VLD AS  RGDEE E  +SV R        E++E+E +V DALLEAI  G
Sbjct: 121 TKKEKKEQRLVLDSASKTRGDEERE--ESVNRGTEEEEEEEEEEEEKEVADALLEAIEGG 180

BLAST of Csor.00g042530 vs. NCBI nr
Match: KGN54677.1 (hypothetical protein Csa_012626 [Cucumis sativus])

HSP 1 Score: 186 bits (471), Expect = 8.91e-57
Identity = 114/176 (64.77%), Postives = 126/176 (71.59%), Query Frame = 0

Query: 1   MAEPQTRETFAQNPSLSILSRSSF--VAADSDPADHPLAPPAVAVTVTAASDSSDVAIED 60
           MAEPQTRE  AQN SLS LSRSSF   A D DP D PL+PPAVAV            +ED
Sbjct: 1   MAEPQTRENLAQNLSLSPLSRSSFSPAAVDPDPVDPPLSPPAVAV------------LED 60

Query: 61  PDLLREPKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAHET 120
           PDL+REPKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIA E 
Sbjct: 61  PDLIREPKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAPEM 120

Query: 121 ETKKKKKKEQRSVLDLASGVRGDEEEEKLDSVQREQDEQEIKVTDALLEAIGEGRE 174
           E  +KK + +  V          EEEE +  V+ E++E+EI + DALLEAI E  E
Sbjct: 121 ERNQKKAEREVRV----------EEEESVHKVE-EEEEEEIGIADALLEAINEEEE 153

BLAST of Csor.00g042530 vs. NCBI nr
Match: KAA0025819.1 (uncharacterized protein E6C27_scaffold34G00730 [Cucumis melo var. makuwa] >TYK09637.1 uncharacterized protein E5676_scaffold447G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 167 bits (424), Expect = 5.36e-50
Identity = 96/133 (72.18%), Postives = 103/133 (77.44%), Query Frame = 0

Query: 1   MAEPQTRETFAQNPSLSILSRSSFV--AADSDPADHPLAPPAVAVTVTAASDSSDVAIED 60
           MAEPQTRE  AQN SLS LSRSSF   A D DP D PL+PPAVA             ++D
Sbjct: 1   MAEPQTRENLAQNLSLSPLSRSSFSPPAVDPDPVDPPLSPPAVA------------PLQD 60

Query: 61  PDLLREPKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAHET 120
           PDL+REPKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIA E 
Sbjct: 61  PDLIREPKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAPEM 119

Query: 121 ETKKKKKKEQRSV 131
           E  + +KKE+R V
Sbjct: 121 E--RNQKKEEREV 119

BLAST of Csor.00g042530 vs. NCBI nr
Match: XP_016488105.1 (PREDICTED: uncharacterized protein LOC107808130 [Nicotiana tabacum])

HSP 1 Score: 87.0 bits (214), Expect = 5.01e-18
Identity = 47/95 (49.47%), Postives = 65/95 (68.42%), Query Frame = 0

Query: 57  EDPDLLREPKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSA-EITPKFGSFNSIA 116
           EDPD LR+PKRRK+CPTAL+  D + SA+N  F+F+FD+KF G S  E+TPKFGSFN + 
Sbjct: 41  EDPDSLRQPKRRKNCPTALDKFDSVNSATNLGFSFSFDSKFSGCSTPEVTPKFGSFNRVK 100

Query: 117 HETETKKKKKKEQRSVLDLASGVRGDEEEEKLDSV 150
            +T + K  K E+R + +       DE++E+ D V
Sbjct: 101 PKTVSSKDPKSEERELKEDDE----DEDDEERDDV 131

BLAST of Csor.00g042530 vs. ExPASy TrEMBL
Match: A0A0A0L245 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G420180 PE=4 SV=1)

HSP 1 Score: 186 bits (471), Expect = 4.31e-57
Identity = 114/176 (64.77%), Postives = 126/176 (71.59%), Query Frame = 0

Query: 1   MAEPQTRETFAQNPSLSILSRSSF--VAADSDPADHPLAPPAVAVTVTAASDSSDVAIED 60
           MAEPQTRE  AQN SLS LSRSSF   A D DP D PL+PPAVAV            +ED
Sbjct: 1   MAEPQTRENLAQNLSLSPLSRSSFSPAAVDPDPVDPPLSPPAVAV------------LED 60

Query: 61  PDLLREPKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAHET 120
           PDL+REPKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIA E 
Sbjct: 61  PDLIREPKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAPEM 120

Query: 121 ETKKKKKKEQRSVLDLASGVRGDEEEEKLDSVQREQDEQEIKVTDALLEAIGEGRE 174
           E  +KK + +  V          EEEE +  V+ E++E+EI + DALLEAI E  E
Sbjct: 121 ERNQKKAEREVRV----------EEEESVHKVE-EEEEEEIGIADALLEAINEEEE 153

BLAST of Csor.00g042530 vs. ExPASy TrEMBL
Match: A0A5D3CCB2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G00340 PE=4 SV=1)

HSP 1 Score: 167 bits (424), Expect = 2.60e-50
Identity = 96/133 (72.18%), Postives = 103/133 (77.44%), Query Frame = 0

Query: 1   MAEPQTRETFAQNPSLSILSRSSFV--AADSDPADHPLAPPAVAVTVTAASDSSDVAIED 60
           MAEPQTRE  AQN SLS LSRSSF   A D DP D PL+PPAVA             ++D
Sbjct: 1   MAEPQTRENLAQNLSLSPLSRSSFSPPAVDPDPVDPPLSPPAVA------------PLQD 60

Query: 61  PDLLREPKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAHET 120
           PDL+REPKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIA E 
Sbjct: 61  PDLIREPKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAPEM 119

Query: 121 ETKKKKKKEQRSV 131
           E  + +KKE+R V
Sbjct: 121 E--RNQKKEEREV 119

BLAST of Csor.00g042530 vs. ExPASy TrEMBL
Match: A0A1S4BGV3 (uncharacterized protein LOC107808130 OS=Nicotiana tabacum OX=4097 GN=LOC107808130 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.43e-18
Identity = 47/95 (49.47%), Postives = 65/95 (68.42%), Query Frame = 0

Query: 57  EDPDLLREPKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSA-EITPKFGSFNSIA 116
           EDPD LR+PKRRK+CPTAL+  D + SA+N  F+F+FD+KF G S  E+TPKFGSFN + 
Sbjct: 41  EDPDSLRQPKRRKNCPTALDKFDSVNSATNLGFSFSFDSKFSGCSTPEVTPKFGSFNRVK 100

Query: 117 HETETKKKKKKEQRSVLDLASGVRGDEEEEKLDSV 150
            +T + K  K E+R + +       DE++E+ D V
Sbjct: 101 PKTVSSKDPKSEERELKEDDE----DEDDEERDDV 131

BLAST of Csor.00g042530 vs. ExPASy TrEMBL
Match: M1CPV9 (Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 5.06e-18
Identity = 50/108 (46.30%), Postives = 68/108 (62.96%), Query Frame = 0

Query: 44  TVTAASDSSDVAIEDPDLLREPKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSA- 103
           + TA S      IEDPD+LR+PKRRK+CP+AL+  D + S SN  F+F+FD+KF G S  
Sbjct: 31  STTAESWEEKPEIEDPDILRQPKRRKNCPSALDKFDSVNSGSNFGFSFSFDSKFSGCSTP 90

Query: 104 EITPKFGSFNSIAHETETKKKKKKEQRSVLDLASGVRGDEEEEKLDSV 150
           E+TPKFGSFN +   +    K  K + +VL+       D++EEK D V
Sbjct: 91  EVTPKFGSFNRVKPGST---KDPKSEETVLEEEDEDDDDDDEEKPDVV 135

BLAST of Csor.00g042530 vs. ExPASy TrEMBL
Match: A0A0V0HAK9 (Putative ovule protein OS=Solanum chacoense OX=4108 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 7.12e-18
Identity = 50/106 (47.17%), Postives = 67/106 (63.21%), Query Frame = 0

Query: 46  TAASDSSDVAIEDPDLLREPKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSA-EI 105
           TA S      IEDPD+LR+PKRRK+CP+AL+  D + S SN  F+F+FD+KF G S  E+
Sbjct: 33  TAESWEEKPEIEDPDILRQPKRRKNCPSALDKFDSVNSGSNFGFSFSFDSKFSGCSTPEV 92

Query: 106 TPKFGSFNSIAHETETKKKKKKEQRSVLDLASGVRGDEEEEKLDSV 150
           TPKFGSFN +   +    K  K + +VL+       D++EEK D V
Sbjct: 93  TPKFGSFNRVKPGST---KDPKSEETVLEEEDEDDDDDDEEKPDVV 135

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6595438.11.08e-116100.00hypothetical protein SDJN03_11991, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6604296.11.40e-7170.90hypothetical protein SDJN03_04905, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN54677.18.91e-5764.77hypothetical protein Csa_012626 [Cucumis sativus][more]
KAA0025819.15.36e-5072.18uncharacterized protein E6C27_scaffold34G00730 [Cucumis melo var. makuwa] >TYK09... [more]
XP_016488105.15.01e-1849.47PREDICTED: uncharacterized protein LOC107808130 [Nicotiana tabacum][more]
Match NameE-valueIdentityDescription
A0A0A0L2454.31e-5764.77Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G420180 PE=4 SV=1[more]
A0A5D3CCB22.60e-5072.18Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S4BGV32.43e-1849.47uncharacterized protein LOC107808130 OS=Nicotiana tabacum OX=4097 GN=LOC10780813... [more]
M1CPV95.06e-1846.30Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1[more]
A0A0V0HAK97.12e-1847.17Putative ovule protein OS=Solanum chacoense OX=4108 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 140..160
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..156

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g042530.m01Csor.00g042530.m01mRNA