Csor.00g042530 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codonsinglepolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGAGCCCCAAACTCGAGAAACTTTCGCCCAAAATCCATCACTCTCAATTCTCTCCCGCTCCTCTTTCGTTGCCGCCGATTCAGATCCCGCCGATCATCCTCTAGCACCACCTGCCGTAGCCGTTACCGTCACAGCCGCCTCCGATTCCAGTGATGTTGCTATCGAGGATCCCGATTTGCTTCGAGAACCTAAACGCCGAAAGCACTGTCCGACGGCGCTCGAGAATCTGGACGAATTGACGTCAGCGTCGAACTCCAGCTTCGCCTTCACTTTCGACACCAAATTCTGCGGGTTCTCCGCGGAGATCACTCCGAAATTCGGATCATTCAACTCGATCGCACACGAAACCGAGACGAAGAAGAAGAAGAAGAAAGAACAGAGATCGGTTCTCGATTTGGCGAGTGGAGTAAGAGGAGACGAAGAAGAGGAGAAATTAGATTCCGTACAGCGCGAACAAGATGAACAAGAAATCAAAGTCACCGATGCGTTGCTAGAAGCAATTGGAGAAGGAAGAGAAGGTCTGGAATCTGTGGCGGATTGA ATGGCAGAGCCCCAAACTCGAGAAACTTTCGCCCAAAATCCATCACTCTCAATTCTCTCCCGCTCCTCTTTCGTTGCCGCCGATTCAGATCCCGCCGATCATCCTCTAGCACCACCTGCCGTAGCCGTTACCGTCACAGCCGCCTCCGATTCCAGTGATGTTGCTATCGAGGATCCCGATTTGCTTCGAGAACCTAAACGCCGAAAGCACTGTCCGACGGCGCTCGAGAATCTGGACGAATTGACGTCAGCGTCGAACTCCAGCTTCGCCTTCACTTTCGACACCAAATTCTGCGGGTTCTCCGCGGAGATCACTCCGAAATTCGGATCATTCAACTCGATCGCACACGAAACCGAGACGAAGAAGAAGAAGAAGAAAGAACAGAGATCGGTTCTCGATTTGGCGAGTGGAGTAAGAGGAGACGAAGAAGAGGAGAAATTAGATTCCGTACAGCGCGAACAAGATGAACAAGAAATCAAAGTCACCGATGCGTTGCTAGAAGCAATTGGAGAAGGAAGAGAAGGTCTGGAATCTGTGGCGGATTGA ATGGCAGAGCCCCAAACTCGAGAAACTTTCGCCCAAAATCCATCACTCTCAATTCTCTCCCGCTCCTCTTTCGTTGCCGCCGATTCAGATCCCGCCGATCATCCTCTAGCACCACCTGCCGTAGCCGTTACCGTCACAGCCGCCTCCGATTCCAGTGATGTTGCTATCGAGGATCCCGATTTGCTTCGAGAACCTAAACGCCGAAAGCACTGTCCGACGGCGCTCGAGAATCTGGACGAATTGACGTCAGCGTCGAACTCCAGCTTCGCCTTCACTTTCGACACCAAATTCTGCGGGTTCTCCGCGGAGATCACTCCGAAATTCGGATCATTCAACTCGATCGCACACGAAACCGAGACGAAGAAGAAGAAGAAGAAAGAACAGAGATCGGTTCTCGATTTGGCGAGTGGAGTAAGAGGAGACGAAGAAGAGGAGAAATTAGATTCCGTACAGCGCGAACAAGATGAACAAGAAATCAAAGTCACCGATGCGTTGCTAGAAGCAATTGGAGAAGGAAGAGAAGGTCTGGAATCTGTGGCGGATTGA MAEPQTRETFAQNPSLSILSRSSFVAADSDPADHPLAPPAVAVTVTAASDSSDVAIEDPDLLREPKRRKHCPTALENLDELTSASNSSFAFTFDTKFCGFSAEITPKFGSFNSIAHETETKKKKKKEQRSVLDLASGVRGDEEEEKLDSVQREQDEQEIKVTDALLEAIGEGREGLESVAD Homology
BLAST of Csor.00g042530 vs. NCBI nr
Match: KAG6595438.1 (hypothetical protein SDJN03_11991, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027436.1 hypothetical protein SDJN02_11449, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 338 bits (867), Expect = 1.08e-116 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of Csor.00g042530 vs. NCBI nr
Match: KAG6604296.1 (hypothetical protein SDJN03_04905, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034454.1 hypothetical protein SDJN02_04183, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 224 bits (571), Expect = 1.40e-71 Identity = 134/189 (70.90%), Postives = 147/189 (77.78%), Query Frame = 0
BLAST of Csor.00g042530 vs. NCBI nr
Match: KGN54677.1 (hypothetical protein Csa_012626 [Cucumis sativus]) HSP 1 Score: 186 bits (471), Expect = 8.91e-57 Identity = 114/176 (64.77%), Postives = 126/176 (71.59%), Query Frame = 0
BLAST of Csor.00g042530 vs. NCBI nr
Match: KAA0025819.1 (uncharacterized protein E6C27_scaffold34G00730 [Cucumis melo var. makuwa] >TYK09637.1 uncharacterized protein E5676_scaffold447G00340 [Cucumis melo var. makuwa]) HSP 1 Score: 167 bits (424), Expect = 5.36e-50 Identity = 96/133 (72.18%), Postives = 103/133 (77.44%), Query Frame = 0
BLAST of Csor.00g042530 vs. NCBI nr
Match: XP_016488105.1 (PREDICTED: uncharacterized protein LOC107808130 [Nicotiana tabacum]) HSP 1 Score: 87.0 bits (214), Expect = 5.01e-18 Identity = 47/95 (49.47%), Postives = 65/95 (68.42%), Query Frame = 0
BLAST of Csor.00g042530 vs. ExPASy TrEMBL
Match: A0A0A0L245 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G420180 PE=4 SV=1) HSP 1 Score: 186 bits (471), Expect = 4.31e-57 Identity = 114/176 (64.77%), Postives = 126/176 (71.59%), Query Frame = 0
BLAST of Csor.00g042530 vs. ExPASy TrEMBL
Match: A0A5D3CCB2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G00340 PE=4 SV=1) HSP 1 Score: 167 bits (424), Expect = 2.60e-50 Identity = 96/133 (72.18%), Postives = 103/133 (77.44%), Query Frame = 0
BLAST of Csor.00g042530 vs. ExPASy TrEMBL
Match: A0A1S4BGV3 (uncharacterized protein LOC107808130 OS=Nicotiana tabacum OX=4097 GN=LOC107808130 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 2.43e-18 Identity = 47/95 (49.47%), Postives = 65/95 (68.42%), Query Frame = 0
BLAST of Csor.00g042530 vs. ExPASy TrEMBL
Match: M1CPV9 (Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 5.06e-18 Identity = 50/108 (46.30%), Postives = 68/108 (62.96%), Query Frame = 0
BLAST of Csor.00g042530 vs. ExPASy TrEMBL
Match: A0A0V0HAK9 (Putative ovule protein OS=Solanum chacoense OX=4108 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 7.12e-18 Identity = 50/106 (47.17%), Postives = 67/106 (63.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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